PMC:3279418 / 10394-10622 JSONTXT

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    pmc-enju-pas

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    bionlp-st-ge-2016-coref

    {"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T4194","span":{"begin":169,"end":188},"obj":"Anaphor"},{"id":"T4195","span":{"begin":57,"end":60},"obj":"Antecedent"},{"id":"T4196","span":{"begin":75,"end":80},"obj":"Antecedent"}],"relations":[{"id":"R3501","pred":"boundBy","subj":"T4194","obj":"T4195"},{"id":"R3502","pred":"boundBy","subj":"T4194","obj":"T4196"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Incubation with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}

    bionlp-st-ge-2016-spacy-parsed

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with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T4209","span":{"begin":44,"end":53},"obj":"http://purl.obolibrary.org/obo/GO_0046903"}],"text":"Incubation with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T3824","span":{"begin":0,"end":228},"obj":"Sentence"},{"id":"T73","span":{"begin":0,"end":228},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Incubation with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T4247","span":{"begin":32,"end":40},"obj":"Positive_regulation"},{"id":"T4248","span":{"begin":32,"end":40},"obj":"Positive_regulation"},{"id":"T4249","span":{"begin":44,"end":53},"obj":"Gene_expression"},{"id":"T4250","span":{"begin":44,"end":53},"obj":"Gene_expression"},{"id":"T4251","span":{"begin":57,"end":60},"obj":"Protein"},{"id":"T4252","span":{"begin":75,"end":80},"obj":"Protein"},{"id":"T4253","span":{"begin":138,"end":146},"obj":"Gene_expression"},{"id":"T4254","span":{"begin":138,"end":146},"obj":"Gene_expression"},{"id":"T4255","span":{"begin":161,"end":165},"obj":"Positive_regulation"},{"id":"T4256","span":{"begin":161,"end":165},"obj":"Positive_regulation"}],"relations":[{"id":"R3521","pred":"themeOf","subj":"T4249","obj":"T4248"},{"id":"R3522","pred":"themeOf","subj":"T4250","obj":"T4247"},{"id":"R3523","pred":"themeOf","subj":"T4251","obj":"T4250"},{"id":"R3524","pred":"themeOf","subj":"T4251","obj":"T4253"},{"id":"R3525","pred":"themeOf","subj":"T4252","obj":"T4249"},{"id":"R3526","pred":"themeOf","subj":"T4252","obj":"T4254"},{"id":"R3527","pred":"themeOf","subj":"T4253","obj":"T4255"},{"id":"R3528","pred":"themeOf","subj":"T4254","obj":"T4256"}],"attributes":[{"id":"M30","pred":"Negation","subj":"T4256","obj":"true"},{"id":"M29","pred":"Negation","subj":"T4255","obj":"true"}],"text":"Incubation with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T4265","span":{"begin":57,"end":60},"obj":"Protein"},{"id":"T4266","span":{"begin":62,"end":69},"obj":"Protein"},{"id":"T4267","span":{"begin":75,"end":80},"obj":"Protein"},{"id":"T4268","span":{"begin":203,"end":210},"obj":"Protein"},{"id":"T4269","span":{"begin":212,"end":215},"obj":"Protein"},{"id":"T4270","span":{"begin":44,"end":53},"obj":"Localization"},{"id":"T4271","span":{"begin":44,"end":53},"obj":"Localization"},{"id":"T4272","span":{"begin":44,"end":53},"obj":"Localization"},{"id":"T4273","span":{"begin":138,"end":146},"obj":"Gene_expression"},{"id":"T4274","span":{"begin":138,"end":146},"obj":"Gene_expression"},{"id":"T4275","span":{"begin":32,"end":40},"obj":"Positive_regulation"},{"id":"T4276","span":{"begin":32,"end":40},"obj":"Positive_regulation"},{"id":"T4277","span":{"begin":32,"end":40},"obj":"Positive_regulation"}],"relations":[{"id":"R3530","pred":"themeOf","subj":"T4265","obj":"T4270"},{"id":"R3531","pred":"themeOf","subj":"T4266","obj":"T4271"},{"id":"R3532","pred":"themeOf","subj":"T4267","obj":"T4272"},{"id":"R3533","pred":"themeOf","subj":"T4268","obj":"T4273"},{"id":"R3534","pred":"themeOf","subj":"T4269","obj":"T4274"},{"id":"R3535","pred":"themeOf","subj":"T4270","obj":"T4275"},{"id":"R3536","pred":"themeOf","subj":"T4271","obj":"T4276"},{"id":"R3537","pred":"themeOf","subj":"T4272","obj":"T4277"}],"text":"Incubation with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T3805","span":{"begin":32,"end":40},"obj":"Positive_regulation"},{"id":"T3806","span":{"begin":32,"end":40},"obj":"Positive_regulation"},{"id":"T3807","span":{"begin":44,"end":53},"obj":"Gene_expression"},{"id":"T3808","span":{"begin":44,"end":53},"obj":"Gene_expression"},{"id":"T3809","span":{"begin":57,"end":60},"obj":"Protein"},{"id":"T3810","span":{"begin":75,"end":80},"obj":"Protein"},{"id":"T3811","span":{"begin":138,"end":146},"obj":"Gene_expression"},{"id":"T3812","span":{"begin":138,"end":146},"obj":"Gene_expression"},{"id":"T3813","span":{"begin":161,"end":165},"obj":"Positive_regulation"},{"id":"T3814","span":{"begin":161,"end":165},"obj":"Positive_regulation"}],"relations":[{"id":"R3126","pred":"themeOf","subj":"T3807","obj":"T3806"},{"id":"R3127","pred":"themeOf","subj":"T3808","obj":"T3805"},{"id":"R3128","pred":"themeOf","subj":"T3809","obj":"T3808"},{"id":"R3129","pred":"themeOf","subj":"T3809","obj":"T3811"},{"id":"R3130","pred":"themeOf","subj":"T3810","obj":"T3807"},{"id":"R3131","pred":"themeOf","subj":"T3810","obj":"T3812"},{"id":"R3132","pred":"themeOf","subj":"T3811","obj":"T3813"},{"id":"R3133","pred":"themeOf","subj":"T3812","obj":"T3814"}],"attributes":[{"id":"M23","pred":"Negation","subj":"T3813","obj":"true"},{"id":"M24","pred":"Negation","subj":"T3814","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Incubation with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T4197","span":{"begin":57,"end":60},"obj":"P05231"},{"id":"T4198","span":{"begin":75,"end":80},"obj":"P04141"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Incubation with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}

    test2

    {"project":"test2","denotations":[{"id":"T3792","span":{"begin":32,"end":40},"obj":"Positive_regulation"},{"id":"T3793","span":{"begin":44,"end":53},"obj":"Gene_expression"},{"id":"T3794","span":{"begin":57,"end":60},"obj":"Protein"},{"id":"T3795","span":{"begin":75,"end":80},"obj":"Protein"}],"relations":[{"id":"R3122","pred":"themeOf","subj":"T3793","obj":"T3792"},{"id":"R3123","pred":"themeOf","subj":"T3794","obj":"T3793"},{"id":"R3124","pred":"themeOf","subj":"T3795","obj":"T3793"}],"text":"Incubation with LPS or poly I:C resulted in secretion of IL6, IL12P70, and GMCSF from both WT and cpdm BMDC; however, BMDC from cpdm mice produced significantly less of all three cytokines compared with WT BMDC (Fig. 3A–C, E–F)."}