PMC:3279418 / 10288-10458 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3279418","sourcedb":"PMC","sourceid":"3279418","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3279418","text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL","divisions":[{"label":"Title","span":{"begin":41,"end":105}}],"tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T3606","span":{"begin":3,"end":5},"obj":"IN"},{"id":"T3607","span":{"begin":6,"end":20},"obj":"JJ"},{"id":"T3608","span":{"begin":21,"end":30},"obj":"NN"},{"id":"T3609","span":{"begin":31,"end":33},"obj":"IN"},{"id":"T3610","span":{"begin":34,"end":38},"obj":"NN"},{"id":"T4014","span":{"begin":41,"end":51},"obj":"NN"},{"id":"T4015","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T4016","span":{"begin":55,"end":70},"obj":"JJ"},{"id":"T4017","span":{"begin":71,"end":80},"obj":"NN"},{"id":"T4018","span":{"begin":81,"end":83},"obj":"IN"},{"id":"T4019","span":{"begin":84,"end":88},"obj":"NN"},{"id":"T4020","span":{"begin":89,"end":93},"obj":"NN"},{"id":"T4021","span":{"begin":94,"end":96},"obj":"VB"},{"id":"T4022","span":{"begin":97,"end":105},"obj":"VB"},{"id":"T4023","span":{"begin":106,"end":116},"obj":"NN"},{"id":"T4024","span":{"begin":117,"end":121},"obj":"IN"},{"id":"T4025","span":{"begin":122,"end":125},"obj":"NN"},{"id":"T4026","span":{"begin":126,"end":128},"obj":"CC"},{"id":"T4027","span":{"begin":129,"end":133},"obj":"NN"},{"id":"T4028","span":{"begin":134,"end":135},"obj":"NN"},{"id":"T4029","span":{"begin":135,"end":136},"obj":"SYM"},{"id":"T4030","span":{"begin":136,"end":137},"obj":"NN"},{"id":"T4031","span":{"begin":138,"end":146},"obj":"VB"},{"id":"T4032","span":{"begin":147,"end":149},"obj":"IN"},{"id":"T4033","span":{"begin":150,"end":159},"obj":"NN"},{"id":"T4034","span":{"begin":160,"end":162},"obj":"IN"},{"id":"T4035","span":{"begin":163,"end":166},"obj":"NN"},{"id":"T4036","span":{"begin":166,"end":167},"obj":"-COMMA-"}],"relations":[{"id":"R3044","pred":"arg2Of","subj":"T3608","obj":"T3606"},{"id":"R3045","pred":"arg1Of","subj":"T3608","obj":"T3607"},{"id":"R3046","pred":"arg2Of","subj":"T3610","obj":"T3609"},{"id":"R3323","pred":"arg1Of","subj":"T4014","obj":"T4015"},{"id":"R3324","pred":"arg1Of","subj":"T4014","obj":"T4018"},{"id":"R3325","pred":"arg2Of","subj":"T4017","obj":"T4015"},{"id":"R3326","pred":"arg1Of","subj":"T4017","obj":"T4016"},{"id":"R3328","pred":"arg2Of","subj":"T4020","obj":"T4018"},{"id":"R3331","pred":"arg1Of","subj":"T4023","obj":"T4031"},{"id":"R3332","pred":"arg1Of","subj":"T4025","obj":"T4026"},{"id":"R3333","pred":"arg2Of","subj":"T4026","obj":"T4024"},{"id":"R3334","pred":"arg2Of","subj":"T4030","obj":"T4026"},{"id":"R3335","pred":"arg1Of","subj":"T4030","obj":"T4027"},{"id":"R3336","pred":"arg1Of","subj":"T4030","obj":"T4028"},{"id":"R3337","pred":"arg1Of","subj":"T4030","obj":"T4029"},{"id":"R3338","pred":"arg1Of","subj":"T4031","obj":"T4032"},{"id":"R3340","pred":"arg2Of","subj":"T4033","obj":"T4032"},{"id":"R3341","pred":"arg1Of","subj":"T4033","obj":"T4034"},{"id":"R3343","pred":"arg1Of","subj":"T4035","obj":"T4036"},{"id":"R3321","pred":"arg1Of","subj":"T4014","obj":"T4021"},{"id":"R3322","pred":"arg2Of","subj":"T4014","obj":"T4022"},{"id":"R3327","pred":"arg1Of","subj":"T4020","obj":"T4019"},{"id":"R3329","pred":"arg2Of","subj":"T4022","obj":"T4021"},{"id":"R3330","pred":"arg1Of","subj":"T4023","obj":"T4024"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T3606","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3607","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3608","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3609","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3610","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4014","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4015","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4016","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4017","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4018","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4019","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4020","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4021","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4022","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4023","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4024","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4025","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4026","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4027","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4028","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4029","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4030","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4031","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4032","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4033","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4034","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4035","pred":"source","obj":"pmc-enju-pas"},{"subj":"T4036","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T4195","span":{"begin":163,"end":166},"obj":"Antecedent"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T4195","pred":"source","obj":"bionlp-st-ge-2016-coref"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3235","span":{"begin":3,"end":5},"obj":"IN"},{"id":"T3236","span":{"begin":6,"end":20},"obj":"JJ"},{"id":"T3237","span":{"begin":21,"end":30},"obj":"NNS"},{"id":"T3238","span":{"begin":31,"end":33},"obj":"IN"},{"id":"T3239","span":{"begin":34,"end":38},"obj":"NNP"},{"id":"T3240","span":{"begin":38,"end":39},"obj":"."},{"id":"T3828","span":{"begin":41,"end":51},"obj":"NN"},{"id":"T3829","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T3830","span":{"begin":55,"end":70},"obj":"JJ"},{"id":"T3831","span":{"begin":71,"end":80},"obj":"NNS"},{"id":"T3832","span":{"begin":81,"end":83},"obj":"IN"},{"id":"T3833","span":{"begin":84,"end":88},"obj":"NN"},{"id":"T3834","span":{"begin":89,"end":93},"obj":"NNP"},{"id":"T3835","span":{"begin":94,"end":96},"obj":"VBZ"},{"id":"T3836","span":{"begin":97,"end":105},"obj":"VBN"},{"id":"T3837","span":{"begin":106,"end":116},"obj":"NNP"},{"id":"T3838","span":{"begin":117,"end":121},"obj":"IN"},{"id":"T3839","span":{"begin":122,"end":125},"obj":"NNP"},{"id":"T3840","span":{"begin":126,"end":128},"obj":"CC"},{"id":"T3841","span":{"begin":129,"end":133},"obj":"RB"},{"id":"T3842","span":{"begin":134,"end":135},"obj":"PRP"},{"id":"T3843","span":{"begin":135,"end":136},"obj":":"},{"id":"T3844","span":{"begin":136,"end":137},"obj":"NNP"},{"id":"T3845","span":{"begin":138,"end":146},"obj":"VBD"},{"id":"T3846","span":{"begin":147,"end":149},"obj":"IN"},{"id":"T3847","span":{"begin":150,"end":159},"obj":"NN"},{"id":"T3848","span":{"begin":160,"end":162},"obj":"IN"},{"id":"T3849","span":{"begin":163,"end":166},"obj":"NNP"},{"id":"T3850","span":{"begin":166,"end":167},"obj":","}],"relations":[{"id":"R2681","pred":"amod","subj":"T3236","obj":"T3237"},{"id":"R2682","pred":"pobj","subj":"T3237","obj":"T3235"},{"id":"R2684","pred":"pobj","subj":"T3239","obj":"T3238"},{"id":"R3135","pred":"nsubjpass","subj":"T3828","obj":"T3836"},{"id":"R3136","pred":"prep","subj":"T3829","obj":"T3828"},{"id":"R3137","pred":"amod","subj":"T3830","obj":"T3831"},{"id":"R3138","pred":"pobj","subj":"T3831","obj":"T3829"},{"id":"R3139","pred":"prep","subj":"T3832","obj":"T3828"},{"id":"R3140","pred":"compound","subj":"T3833","obj":"T3834"},{"id":"R3141","pred":"pobj","subj":"T3834","obj":"T3832"},{"id":"R3142","pred":"auxpass","subj":"T3835","obj":"T3836"},{"id":"R3144","pred":"dobj","subj":"T3837","obj":"T3836"},{"id":"R3145","pred":"prep","subj":"T3838","obj":"T3836"},{"id":"R3146","pred":"pobj","subj":"T3839","obj":"T3838"},{"id":"R3147","pred":"cc","subj":"T3840","obj":"T3836"},{"id":"R3148","pred":"advmod","subj":"T3841","obj":"T3845"},{"id":"R3149","pred":"nsubj","subj":"T3842","obj":"T3845"},{"id":"R3150","pred":"punct","subj":"T3843","obj":"T3845"},{"id":"R3151","pred":"nsubj","subj":"T3844","obj":"T3845"},{"id":"R3152","pred":"conj","subj":"T3845","obj":"T3836"},{"id":"R3153","pred":"prep","subj":"T3846","obj":"T3845"},{"id":"R3154","pred":"pobj","subj":"T3847","obj":"T3846"},{"id":"R3155","pred":"prep","subj":"T3848","obj":"T3847"},{"id":"R3156","pred":"pobj","subj":"T3849","obj":"T3848"},{"id":"R3157","pred":"punct","subj":"T3850","obj":"T3849"}],"attributes":[{"subj":"T3235","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3236","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3237","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3238","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3239","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3240","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3828","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3829","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3830","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3831","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3832","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3833","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3834","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3835","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3836","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3837","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3838","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3839","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3840","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3841","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3842","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3843","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3844","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3845","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3846","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3847","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3848","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3849","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3850","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T4209","span":{"begin":150,"end":159},"obj":"http://purl.obolibrary.org/obo/GO_0046903"}],"attributes":[{"subj":"T4209","pred":"source","obj":"GO-BP"}]},{"project":"sentences","denotations":[{"id":"T3823","span":{"begin":41,"end":105},"obj":"Sentence"},{"id":"T72","span":{"begin":41,"end":105},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T3823","pred":"source","obj":"sentences"},{"subj":"T72","pred":"source","obj":"sentences"}]},{"project":"events-check-again","denotations":[{"id":"T4247","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T4248","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T4249","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T4250","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T4251","span":{"begin":163,"end":166},"obj":"Protein"}],"relations":[{"id":"R3521","pred":"themeOf","subj":"T4249","obj":"T4248"},{"id":"R3522","pred":"themeOf","subj":"T4250","obj":"T4247"},{"id":"R3523","pred":"themeOf","subj":"T4251","obj":"T4250"}],"attributes":[{"subj":"T4247","pred":"source","obj":"events-check-again"},{"subj":"T4248","pred":"source","obj":"events-check-again"},{"subj":"T4249","pred":"source","obj":"events-check-again"},{"subj":"T4250","pred":"source","obj":"events-check-again"},{"subj":"T4251","pred":"source","obj":"events-check-again"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T4265","span":{"begin":163,"end":166},"obj":"Protein"},{"id":"T4270","span":{"begin":150,"end":159},"obj":"Localization"},{"id":"T4271","span":{"begin":150,"end":159},"obj":"Localization"},{"id":"T4272","span":{"begin":150,"end":159},"obj":"Localization"},{"id":"T4275","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T4276","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T4277","span":{"begin":138,"end":146},"obj":"Positive_regulation"}],"relations":[{"id":"R3530","pred":"themeOf","subj":"T4265","obj":"T4270"},{"id":"R3535","pred":"themeOf","subj":"T4270","obj":"T4275"},{"id":"R3536","pred":"themeOf","subj":"T4271","obj":"T4276"},{"id":"R3537","pred":"themeOf","subj":"T4272","obj":"T4277"}],"attributes":[{"subj":"T4265","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T4270","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T4271","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T4272","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T4275","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T4276","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T4277","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T3805","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T3806","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T3807","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T3808","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T3809","span":{"begin":163,"end":166},"obj":"Protein"}],"relations":[{"id":"R3126","pred":"themeOf","subj":"T3807","obj":"T3806"},{"id":"R3127","pred":"themeOf","subj":"T3808","obj":"T3805"},{"id":"R3128","pred":"themeOf","subj":"T3809","obj":"T3808"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T3805","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T3806","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T3807","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T3808","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T3809","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T4197","span":{"begin":163,"end":166},"obj":"P05231"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T4197","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T3791","span":{"begin":97,"end":105},"obj":"Negative_regulation"},{"id":"T3792","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T3793","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T3794","span":{"begin":163,"end":166},"obj":"Protein"}],"relations":[{"id":"R3122","pred":"themeOf","subj":"T3793","obj":"T3792"},{"id":"R3123","pred":"themeOf","subj":"T3794","obj":"T3793"}],"attributes":[{"subj":"T3791","pred":"source","obj":"test2"},{"subj":"T3792","pred":"source","obj":"test2"},{"subj":"T3793","pred":"source","obj":"test2"},{"subj":"T3794","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#ec93bf","default":true},{"id":"bionlp-st-ge-2016-coref","color":"#93d9ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ece593"},{"id":"GO-BP","color":"#cb93ec"},{"id":"sentences","color":"#93ecb1"},{"id":"events-check-again","color":"#ec9793"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#93a9ec"},{"id":"bionlp-st-ge-2016-reference","color":"#c3ec93"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec93dd"},{"id":"test2","color":"#93ece1"}]}]}}