PMC:3279418 / 10288-10458
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-coref
{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T4195","span":{"begin":163,"end":166},"obj":"Antecedent"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3235","span":{"begin":3,"end":5},"obj":"IN"},{"id":"T3236","span":{"begin":6,"end":20},"obj":"JJ"},{"id":"T3237","span":{"begin":21,"end":30},"obj":"NNS"},{"id":"T3238","span":{"begin":31,"end":33},"obj":"IN"},{"id":"T3239","span":{"begin":34,"end":38},"obj":"NNP"},{"id":"T3240","span":{"begin":38,"end":39},"obj":"."},{"id":"T3828","span":{"begin":41,"end":51},"obj":"NN"},{"id":"T3829","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T3830","span":{"begin":55,"end":70},"obj":"JJ"},{"id":"T3831","span":{"begin":71,"end":80},"obj":"NNS"},{"id":"T3832","span":{"begin":81,"end":83},"obj":"IN"},{"id":"T3833","span":{"begin":84,"end":88},"obj":"NN"},{"id":"T3834","span":{"begin":89,"end":93},"obj":"NNP"},{"id":"T3835","span":{"begin":94,"end":96},"obj":"VBZ"},{"id":"T3836","span":{"begin":97,"end":105},"obj":"VBN"},{"id":"T3837","span":{"begin":106,"end":116},"obj":"NNP"},{"id":"T3838","span":{"begin":117,"end":121},"obj":"IN"},{"id":"T3839","span":{"begin":122,"end":125},"obj":"NNP"},{"id":"T3840","span":{"begin":126,"end":128},"obj":"CC"},{"id":"T3841","span":{"begin":129,"end":133},"obj":"RB"},{"id":"T3842","span":{"begin":134,"end":135},"obj":"PRP"},{"id":"T3843","span":{"begin":135,"end":136},"obj":":"},{"id":"T3844","span":{"begin":136,"end":137},"obj":"NNP"},{"id":"T3845","span":{"begin":138,"end":146},"obj":"VBD"},{"id":"T3846","span":{"begin":147,"end":149},"obj":"IN"},{"id":"T3847","span":{"begin":150,"end":159},"obj":"NN"},{"id":"T3848","span":{"begin":160,"end":162},"obj":"IN"},{"id":"T3849","span":{"begin":163,"end":166},"obj":"NNP"},{"id":"T3850","span":{"begin":166,"end":167},"obj":","}],"relations":[{"id":"R2681","pred":"amod","subj":"T3236","obj":"T3237"},{"id":"R2682","pred":"pobj","subj":"T3237","obj":"T3235"},{"id":"R2684","pred":"pobj","subj":"T3239","obj":"T3238"},{"id":"R3135","pred":"nsubjpass","subj":"T3828","obj":"T3836"},{"id":"R3136","pred":"prep","subj":"T3829","obj":"T3828"},{"id":"R3137","pred":"amod","subj":"T3830","obj":"T3831"},{"id":"R3138","pred":"pobj","subj":"T3831","obj":"T3829"},{"id":"R3139","pred":"prep","subj":"T3832","obj":"T3828"},{"id":"R3140","pred":"compound","subj":"T3833","obj":"T3834"},{"id":"R3141","pred":"pobj","subj":"T3834","obj":"T3832"},{"id":"R3142","pred":"auxpass","subj":"T3835","obj":"T3836"},{"id":"R3144","pred":"dobj","subj":"T3837","obj":"T3836"},{"id":"R3145","pred":"prep","subj":"T3838","obj":"T3836"},{"id":"R3146","pred":"pobj","subj":"T3839","obj":"T3838"},{"id":"R3147","pred":"cc","subj":"T3840","obj":"T3836"},{"id":"R3148","pred":"advmod","subj":"T3841","obj":"T3845"},{"id":"R3149","pred":"nsubj","subj":"T3842","obj":"T3845"},{"id":"R3150","pred":"punct","subj":"T3843","obj":"T3845"},{"id":"R3151","pred":"nsubj","subj":"T3844","obj":"T3845"},{"id":"R3152","pred":"conj","subj":"T3845","obj":"T3836"},{"id":"R3153","pred":"prep","subj":"T3846","obj":"T3845"},{"id":"R3154","pred":"pobj","subj":"T3847","obj":"T3846"},{"id":"R3155","pred":"prep","subj":"T3848","obj":"T3847"},{"id":"R3156","pred":"pobj","subj":"T3849","obj":"T3848"},{"id":"R3157","pred":"punct","subj":"T3850","obj":"T3849"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T4209","span":{"begin":150,"end":159},"obj":"http://purl.obolibrary.org/obo/GO_0046903"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}
sentences
{"project":"sentences","denotations":[{"id":"T3823","span":{"begin":41,"end":105},"obj":"Sentence"},{"id":"T72","span":{"begin":41,"end":105},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T4247","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T4248","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T4249","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T4250","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T4251","span":{"begin":163,"end":166},"obj":"Protein"}],"relations":[{"id":"R3521","pred":"themeOf","subj":"T4249","obj":"T4248"},{"id":"R3522","pred":"themeOf","subj":"T4250","obj":"T4247"},{"id":"R3523","pred":"themeOf","subj":"T4251","obj":"T4250"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T4265","span":{"begin":163,"end":166},"obj":"Protein"},{"id":"T4270","span":{"begin":150,"end":159},"obj":"Localization"},{"id":"T4271","span":{"begin":150,"end":159},"obj":"Localization"},{"id":"T4272","span":{"begin":150,"end":159},"obj":"Localization"},{"id":"T4275","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T4276","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T4277","span":{"begin":138,"end":146},"obj":"Positive_regulation"}],"relations":[{"id":"R3530","pred":"themeOf","subj":"T4265","obj":"T4270"},{"id":"R3535","pred":"themeOf","subj":"T4270","obj":"T4275"},{"id":"R3536","pred":"themeOf","subj":"T4271","obj":"T4276"},{"id":"R3537","pred":"themeOf","subj":"T4272","obj":"T4277"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T3805","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T3806","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T3807","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T3808","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T3809","span":{"begin":163,"end":166},"obj":"Protein"}],"relations":[{"id":"R3126","pred":"themeOf","subj":"T3807","obj":"T3806"},{"id":"R3127","pred":"themeOf","subj":"T3808","obj":"T3805"},{"id":"R3128","pred":"themeOf","subj":"T3809","obj":"T3808"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T4197","span":{"begin":163,"end":166},"obj":"P05231"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}
test2
{"project":"test2","denotations":[{"id":"T3791","span":{"begin":97,"end":105},"obj":"Negative_regulation"},{"id":"T3792","span":{"begin":138,"end":146},"obj":"Positive_regulation"},{"id":"T3793","span":{"begin":150,"end":159},"obj":"Gene_expression"},{"id":"T3794","span":{"begin":163,"end":166},"obj":"Protein"}],"relations":[{"id":"R3122","pred":"themeOf","subj":"T3793","obj":"T3792"},{"id":"R3123","pred":"themeOf","subj":"T3794","obj":"T3793"}],"text":"on of co-stimulatory molecules by BMDC.\n\nProduction of proinflammatory mediators by cpdm BMDC is impaired\nIncubation with LPS or poly I:C resulted in secretion of IL6, IL"}