PMC:3062687 / 0-163 JSONTXT

Annnotations TAB JSON ListView MergeView

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T239","span":{"begin":0,"end":4},"obj":"O14920"},{"id":"T240","span":{"begin":31,"end":35},"obj":"P23396"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T100","span":{"begin":0,"end":4},"obj":"NN"},{"id":"T101","span":{"begin":5,"end":20},"obj":"NN"},{"id":"T102","span":{"begin":21,"end":30},"obj":"VB"},{"id":"T103","span":{"begin":31,"end":35},"obj":"NN"},{"id":"T104","span":{"begin":36,"end":43},"obj":"JJ"},{"id":"T105","span":{"begin":44,"end":57},"obj":"NN"},{"id":"T106","span":{"begin":58,"end":61},"obj":"CC"},{"id":"T107","span":{"begin":62,"end":67},"obj":"NN"},{"id":"T108","span":{"begin":68,"end":76},"obj":"NN"},{"id":"T109","span":{"begin":77,"end":95},"obj":"NN"},{"id":"T110","span":{"begin":96,"end":105},"obj":"NN"},{"id":"T111","span":{"begin":105,"end":106},"obj":"-COLON-"},{"id":"T112","span":{"begin":106,"end":108},"obj":"NN"},{"id":"T113","span":{"begin":109,"end":118},"obj":"NN"},{"id":"T114","span":{"begin":130,"end":135},"obj":"NN"},{"id":"T115","span":{"begin":136,"end":138},"obj":"VB"},{"id":"T116","span":{"begin":139,"end":140},"obj":"DT"},{"id":"T117","span":{"begin":141,"end":146},"obj":"JJ"},{"id":"T118","span":{"begin":147,"end":151},"obj":"NN"},{"id":"T119","span":{"begin":152,"end":161},"obj":"NN"}],"relations":[{"id":"R78","pred":"modOf","subj":"T100","obj":"T102"},{"id":"R79","pred":"arg1Of","subj":"T100","obj":"T111"},{"id":"R80","pred":"arg1Of","subj":"T101","obj":"T102"},{"id":"R81","pred":"arg1Of","subj":"T105","obj":"T103"},{"id":"R82","pred":"arg1Of","subj":"T105","obj":"T104"},{"id":"R83","pred":"arg1Of","subj":"T105","obj":"T106"},{"id":"R84","pred":"arg2Of","subj":"T106","obj":"T102"},{"id":"R85","pred":"arg2Of","subj":"T110","obj":"T106"},{"id":"R86","pred":"arg1Of","subj":"T110","obj":"T107"},{"id":"R87","pred":"arg1Of","subj":"T110","obj":"T108"},{"id":"R88","pred":"arg1Of","subj":"T110","obj":"T109"},{"id":"R89","pred":"arg1Of","subj":"T113","obj":"T100"},{"id":"R90","pred":"arg1Of","subj":"T113","obj":"T112"},{"id":"R91","pred":"arg1Of","subj":"T114","obj":"T115"},{"id":"R93","pred":"arg2Of","subj":"T119","obj":"T115"},{"id":"R94","pred":"arg1Of","subj":"T119","obj":"T116"},{"id":"R95","pred":"arg1Of","subj":"T119","obj":"T117"},{"id":"R96","pred":"arg1Of","subj":"T119","obj":"T118"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T250","span":{"begin":0,"end":4},"obj":"NNP"},{"id":"T251","span":{"begin":5,"end":20},"obj":"NN"},{"id":"T252","span":{"begin":21,"end":30},"obj":"VBZ"},{"id":"T253","span":{"begin":31,"end":35},"obj":"CD"},{"id":"T254","span":{"begin":36,"end":43},"obj":"JJ"},{"id":"T255","span":{"begin":44,"end":57},"obj":"NN"},{"id":"T256","span":{"begin":58,"end":61},"obj":"CC"},{"id":"T257","span":{"begin":62,"end":67},"obj":"JJ"},{"id":"T258","span":{"begin":68,"end":76},"obj":"NN"},{"id":"T259","span":{"begin":77,"end":95},"obj":"NNP"},{"id":"T260","span":{"begin":96,"end":105},"obj":"NNP"},{"id":"T261","span":{"begin":105,"end":106},"obj":":"},{"id":"T262","span":{"begin":106,"end":108},"obj":"NNP"},{"id":"T263","span":{"begin":109,"end":118},"obj":"NN"},{"id":"T264","span":{"begin":130,"end":135},"obj":"NN"},{"id":"T265","span":{"begin":136,"end":138},"obj":"VBZ"},{"id":"T266","span":{"begin":139,"end":140},"obj":"DT"},{"id":"T267","span":{"begin":141,"end":146},"obj":"JJ"},{"id":"T268","span":{"begin":147,"end":151},"obj":"NN"},{"id":"T269","span":{"begin":152,"end":161},"obj":"NN"}],"relations":[{"id":"R506","pred":"compound","subj":"T263","obj":"T264"},{"id":"R507","pred":"nsubj","subj":"T264","obj":"T265"},{"id":"R508","pred":"ROOT","subj":"T265","obj":"T265"},{"id":"R509","pred":"det","subj":"T266","obj":"T269"},{"id":"R510","pred":"amod","subj":"T267","obj":"T269"},{"id":"R511","pred":"compound","subj":"T268","obj":"T269"},{"id":"R512","pred":"attr","subj":"T269","obj":"T265"},{"id":"R493","pred":"compound","subj":"T250","obj":"T251"},{"id":"R494","pred":"nsubj","subj":"T251","obj":"T252"},{"id":"R495","pred":"ROOT","subj":"T252","obj":"T252"},{"id":"R496","pred":"nummod","subj":"T253","obj":"T255"},{"id":"R497","pred":"amod","subj":"T254","obj":"T255"},{"id":"R498","pred":"nmod","subj":"T255","obj":"T258"},{"id":"R499","pred":"cc","subj":"T256","obj":"T255"},{"id":"R500","pred":"compound","subj":"T257","obj":"T258"},{"id":"R501","pred":"dobj","subj":"T258","obj":"T252"},{"id":"R502","pred":"compound","subj":"T259","obj":"T260"},{"id":"R503","pred":"npadvmod","subj":"T260","obj":"T252"},{"id":"R504","pred":"punct","subj":"T261","obj":"T260"},{"id":"R505","pred":"compound","subj":"T262","obj":"T264"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T432","span":{"begin":5,"end":20},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}

    sentences

    {"project":"sentences","denotations":[{"id":"T94","span":{"begin":0,"end":118},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":118},"obj":"Sentence"},{"id":"T2","span":{"begin":121,"end":129},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T562","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T563","span":{"begin":5,"end":20},"obj":"Phosphorylation"},{"id":"T564","span":{"begin":21,"end":30},"obj":"Regulation"},{"id":"T565","span":{"begin":31,"end":35},"obj":"Protein"},{"id":"T566","span":{"begin":36,"end":43},"obj":"Entity"},{"id":"T567","span":{"begin":44,"end":57},"obj":"Localization"}],"relations":[{"id":"R439","pred":"themeOf","subj":"T562","obj":"T563"},{"id":"R440","pred":"causeOf","subj":"T563","obj":"T564"},{"id":"R441","pred":"themeOf","subj":"T565","obj":"T567"},{"id":"R442","pred":"locationOf","subj":"T566","obj":"T567"},{"id":"R443","pred":"themeOf","subj":"T567","obj":"T564"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T499","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T500","span":{"begin":31,"end":35},"obj":"Protein"},{"id":"T501","span":{"begin":62,"end":67},"obj":"Protein"},{"id":"T502","span":{"begin":5,"end":20},"obj":"Phosphorylation"},{"id":"T503","span":{"begin":36,"end":43},"obj":"Entity"},{"id":"T504","span":{"begin":44,"end":57},"obj":"Localization"},{"id":"T505","span":{"begin":21,"end":30},"obj":"Regulation"},{"id":"T506","span":{"begin":130,"end":135},"obj":"Protein"}],"relations":[{"id":"R395","pred":"themeOf","subj":"T499","obj":"T502"},{"id":"R396","pred":"themeOf","subj":"T500","obj":"T504"},{"id":"R397","pred":"causeOf","subj":"T502","obj":"T505"},{"id":"R398","pred":"locationOf","subj":"T503","obj":"T504"},{"id":"R399","pred":"themeOf","subj":"T504","obj":"T505"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T62","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T63","span":{"begin":5,"end":20},"obj":"Phosphorylation"},{"id":"T64","span":{"begin":21,"end":30},"obj":"Regulation"},{"id":"T65","span":{"begin":31,"end":35},"obj":"Protein"},{"id":"T66","span":{"begin":36,"end":43},"obj":"Entity"},{"id":"T67","span":{"begin":44,"end":57},"obj":"Localization"}],"relations":[{"id":"R51","pred":"themeOf","subj":"T62","obj":"T63"},{"id":"R52","pred":"causeOf","subj":"T63","obj":"T64"},{"id":"R53","pred":"themeOf","subj":"T65","obj":"T67"},{"id":"R54","pred":"locationOf","subj":"T66","obj":"T67"},{"id":"R55","pred":"themeOf","subj":"T67","obj":"T64"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}

    test2

    {"project":"test2","denotations":[{"id":"T33","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T34","span":{"begin":5,"end":20},"obj":"Phosphorylation"},{"id":"T35","span":{"begin":21,"end":30},"obj":"Regulation"},{"id":"T36","span":{"begin":31,"end":35},"obj":"Protein"},{"id":"T37","span":{"begin":36,"end":43},"obj":"Entity"},{"id":"T38","span":{"begin":44,"end":57},"obj":"Localization"}],"relations":[{"id":"R28","pred":"themeOf","subj":"T33","obj":"T34"},{"id":"R29","pred":"causeOf","subj":"T34","obj":"T35"},{"id":"R30","pred":"themeOf","subj":"T36","obj":"T38"},{"id":"R31","pred":"locationOf","subj":"T37","obj":"T38"},{"id":"R32","pred":"themeOf","subj":"T38","obj":"T35"}],"attributes":[{"id":"M2","pred":"Speculation","subj":"T37","obj":"true"}],"text":"IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection \n\nAbstract\nNF-κB is a major gene regulator i"}