PMC:3062687 / 0-163
Annnotations
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T239 | 0-4 | O14920 | denotes | IKKβ |
T240 | 31-35 | P23396 | denotes | RPS3 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T100 | 0-4 | NN | denotes | IKKβ |
T101 | 5-20 | NN | denotes | phosphorylation |
T102 | 21-30 | VB | denotes | regulates |
T103 | 31-35 | NN | denotes | RPS3 |
T104 | 36-43 | JJ | denotes | nuclear |
T105 | 44-57 | NN | denotes | translocation |
T106 | 58-61 | CC | denotes | and |
T107 | 62-67 | NN | denotes | NF-κB |
T108 | 68-76 | NN | denotes | function |
T109 | 77-95 | NN | denotes | during Escherichia |
T110 | 96-105 | NN | denotes | coli O157 |
T111 | 105-106 | -COLON- | denotes | : |
T112 | 106-108 | NN | denotes | H7 |
T113 | 109-118 | NN | denotes | infection |
T114 | 130-135 | NN | denotes | NF-κB |
T115 | 136-138 | VB | denotes | is |
T116 | 139-140 | DT | denotes | a |
T117 | 141-146 | JJ | denotes | major |
T118 | 147-151 | NN | denotes | gene |
T119 | 152-161 | NN | denotes | regulator |
R78 | T100 | T102 | modOf | IKKβ,regulates |
R79 | T100 | T111 | arg1Of | IKKβ,: |
R80 | T101 | T102 | arg1Of | phosphorylation,regulates |
R81 | T105 | T103 | arg1Of | translocation,RPS3 |
R82 | T105 | T104 | arg1Of | translocation,nuclear |
R83 | T105 | T106 | arg1Of | translocation,and |
R84 | T106 | T102 | arg2Of | and,regulates |
R85 | T110 | T106 | arg2Of | coli O157,and |
R86 | T110 | T107 | arg1Of | coli O157,NF-κB |
R87 | T110 | T108 | arg1Of | coli O157,function |
R88 | T110 | T109 | arg1Of | coli O157,during Escherichia |
R89 | T113 | T100 | arg1Of | infection,IKKβ |
R90 | T113 | T112 | arg1Of | infection,H7 |
R91 | T114 | T115 | arg1Of | NF-κB,is |
R93 | T119 | T115 | arg2Of | regulator,is |
R94 | T119 | T116 | arg1Of | regulator,a |
R95 | T119 | T117 | arg1Of | regulator,major |
R96 | T119 | T118 | arg1Of | regulator,gene |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T250 | 0-4 | NNP | denotes | IKKβ |
T251 | 5-20 | NN | denotes | phosphorylation |
T252 | 21-30 | VBZ | denotes | regulates |
T253 | 31-35 | CD | denotes | RPS3 |
T254 | 36-43 | JJ | denotes | nuclear |
T255 | 44-57 | NN | denotes | translocation |
T256 | 58-61 | CC | denotes | and |
T257 | 62-67 | JJ | denotes | NF-κB |
T258 | 68-76 | NN | denotes | function |
T259 | 77-95 | NNP | denotes | during Escherichia |
T260 | 96-105 | NNP | denotes | coli O157 |
T261 | 105-106 | : | denotes | : |
T262 | 106-108 | NNP | denotes | H7 |
T263 | 109-118 | NN | denotes | infection |
T264 | 130-135 | NN | denotes | NF-κB |
T265 | 136-138 | VBZ | denotes | is |
T266 | 139-140 | DT | denotes | a |
T267 | 141-146 | JJ | denotes | major |
T268 | 147-151 | NN | denotes | gene |
T269 | 152-161 | NN | denotes | regulator |
R506 | T263 | T264 | compound | infection,NF-κB |
R507 | T264 | T265 | nsubj | NF-κB,is |
R508 | T265 | T265 | ROOT | is,is |
R509 | T266 | T269 | det | a,regulator |
R510 | T267 | T269 | amod | major,regulator |
R511 | T268 | T269 | compound | gene,regulator |
R512 | T269 | T265 | attr | regulator,is |
R493 | T250 | T251 | compound | IKKβ,phosphorylation |
R494 | T251 | T252 | nsubj | phosphorylation,regulates |
R495 | T252 | T252 | ROOT | regulates,regulates |
R496 | T253 | T255 | nummod | RPS3,translocation |
R497 | T254 | T255 | amod | nuclear,translocation |
R498 | T255 | T258 | nmod | translocation,function |
R499 | T256 | T255 | cc | and,translocation |
R500 | T257 | T258 | compound | NF-κB,function |
R501 | T258 | T252 | dobj | function,regulates |
R502 | T259 | T260 | compound | during Escherichia,coli O157 |
R503 | T260 | T252 | npadvmod | coli O157,regulates |
R504 | T261 | T260 | punct | :,coli O157 |
R505 | T262 | T264 | compound | H7,NF-κB |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T432 | 5-20 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T94 | 0-118 | Sentence | denotes | IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection |
T1 | 0-118 | Sentence | denotes | IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection |
T2 | 121-129 | Sentence | denotes | Abstract |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T562 | 0-4 | Protein | denotes | IKKβ |
T563 | 5-20 | Phosphorylation | denotes | phosphorylation |
T564 | 21-30 | Regulation | denotes | regulates |
T565 | 31-35 | Protein | denotes | RPS3 |
T566 | 36-43 | Entity | denotes | nuclear |
T567 | 44-57 | Localization | denotes | translocation |
R439 | T562 | T563 | themeOf | IKKβ,phosphorylation |
R440 | T563 | T564 | causeOf | phosphorylation,regulates |
R441 | T565 | T567 | themeOf | RPS3,translocation |
R442 | T566 | T567 | locationOf | nuclear,translocation |
R443 | T567 | T564 | themeOf | translocation,regulates |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T499 | 0-4 | Protein | denotes | IKKβ |
T500 | 31-35 | Protein | denotes | RPS3 |
T501 | 62-67 | Protein | denotes | NF-κB |
T502 | 5-20 | Phosphorylation | denotes | phosphorylation |
T503 | 36-43 | Entity | denotes | nuclear |
T504 | 44-57 | Localization | denotes | translocation |
T505 | 21-30 | Regulation | denotes | regulates |
T506 | 130-135 | Protein | denotes | NF-κB |
R395 | T499 | T502 | themeOf | IKKβ,phosphorylation |
R396 | T500 | T504 | themeOf | RPS3,translocation |
R397 | T502 | T505 | causeOf | phosphorylation,regulates |
R398 | T503 | T504 | locationOf | nuclear,translocation |
R399 | T504 | T505 | themeOf | translocation,regulates |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T62 | 0-4 | Protein | denotes | IKKβ |
T63 | 5-20 | Phosphorylation | denotes | phosphorylation |
T64 | 21-30 | Regulation | denotes | regulates |
T65 | 31-35 | Protein | denotes | RPS3 |
T66 | 36-43 | Entity | denotes | nuclear |
T67 | 44-57 | Localization | denotes | translocation |
R51 | T62 | T63 | themeOf | IKKβ,phosphorylation |
R52 | T63 | T64 | causeOf | phosphorylation,regulates |
R53 | T65 | T67 | themeOf | RPS3,translocation |
R54 | T66 | T67 | locationOf | nuclear,translocation |
R55 | T67 | T64 | themeOf | translocation,regulates |
test2
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T33 | 0-4 | Protein | denotes | IKKβ | |
T34 | 5-20 | Phosphorylation | denotes | phosphorylation | |
T35 | 21-30 | Regulation | denotes | regulates | |
T36 | 31-35 | Protein | denotes | RPS3 | |
T37 | 36-43 | Entity | denotes | nuclear | true |
T38 | 44-57 | Localization | denotes | translocation | |
R28 | T33 | T34 | themeOf | IKKβ,phosphorylation | |
R29 | T34 | T35 | causeOf | phosphorylation,regulates | |
R30 | T36 | T38 | themeOf | RPS3,translocation | |
R31 | T37 | T38 | locationOf | nuclear,translocation | |
R32 | T38 | T35 | themeOf | translocation,regulates |