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PMC:2817507 / 3197-3356 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1256 155-158 NN denotes ICH
T1255 142-154 JJ denotes experimental
T1254 139-141 TO denotes to
T1253 129-138 VB denotes subjected
T1252 122-128 NN denotes brains
T1251 118-121 NN denotes rat
T1250 114-117 DT denotes the
T1249 111-113 IN denotes in
T1248 101-110 NN denotes signaling
T1247 87-100 JJ denotes TLR4-mediated
T1246 84-86 IN denotes of
T1245 73-83 NN denotes activation
T1244 69-72 DT denotes the
T1243 65-68 CC denotes and
T1242 60-64 NN denotes gene
T1241 55-59 NN denotes TLR4
T1240 52-54 IN denotes of
T1239 38-51 NN denotes transcription
T1238 34-37 DT denotes the
T1237 25-33 VB denotes detected
T1236 22-24 PRP denotes we
T1235 20-21 -COMMA- denotes ,
T1234 15-20 NN denotes study
T1233 7-14 JJ denotes present
T1232 3-6 DT denotes the
T1231 0-2 IN denotes In
R872 T1234 T1231 arg2Of study,In
R873 T1234 T1232 arg1Of study,the
R874 T1234 T1233 arg1Of study,present
R875 T1236 T1237 arg1Of we,detected
R876 T1237 T1231 arg1Of detected,In
R877 T1237 T1235 arg1Of detected,","
R878 T1239 T1238 arg1Of transcription,the
R879 T1239 T1240 arg1Of transcription,of
R880 T1239 T1243 arg1Of transcription,and
R881 T1242 T1240 arg2Of gene,of
R882 T1242 T1241 arg1Of gene,TLR4
R883 T1243 T1237 arg2Of and,detected
R884 T1245 T1243 arg2Of activation,and
R885 T1245 T1244 arg1Of activation,the
R886 T1245 T1246 arg1Of activation,of
R887 T1245 T1249 arg1Of activation,in
R888 T1248 T1246 arg2Of signaling,of
R889 T1248 T1247 arg1Of signaling,TLR4-mediated
R890 T1252 T1249 arg2Of brains,in
R891 T1252 T1250 arg1Of brains,the
R892 T1252 T1251 arg1Of brains,rat
R893 T1252 T1253 arg2Of brains,subjected
R894 T1253 T1254 arg1Of subjected,to
R895 T1256 T1254 arg2Of ICH,to
R896 T1256 T1255 arg1Of ICH,experimental

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T865 87-91 Protein denotes TLR4
T864 55-59 Protein denotes TLR4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1654 87-91 http://www.uniprot.org/uniprot/O00206 denotes TLR4
T1653 55-59 http://www.uniprot.org/uniprot/O00206 denotes TLR4

GO-BP

Id Subject Object Predicate Lexical cue
T881 38-51 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T875 101-110 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

sentences

Id Subject Object Predicate Lexical cue
T849 0-159 Sentence denotes In the present study, we detected the transcription of TLR4 gene and the activation of TLR4-mediated signaling in the rat brains subjected to experimental ICH.
T24 0-159 Sentence denotes In the present study, we detected the transcription of TLR4 gene and the activation of TLR4-mediated signaling in the rat brains subjected to experimental ICH.

simple1

Id Subject Object Predicate Lexical cue
T928 87-91 Protein denotes TLR4
T927 55-59 Protein denotes TLR4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1722 38-51 Transcription denotes transcription
T1716 87-91 Protein denotes TLR4
T1715 55-59 Protein denotes TLR4
R1312 T1715 T1722 themeOf TLR4,transcription

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1665 38-51 Transcription denotes transcription
T1661 87-91 Protein denotes TLR4
T1660 55-59 Protein denotes TLR4
R1290 T1660 T1665 themeOf TLR4,transcription

DLUT931

Id Subject Object Predicate Lexical cue
T1675 38-51 Transcription denotes transcription
T1670 87-91 Protein denotes TLR4
T1669 55-59 Protein denotes TLR4
R1293 T1669 T1675 themeOf TLR4,transcription

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1725 87-100 Protein denotes TLR4-mediated
T1754 34-64 Transcription denotes the transcription of TLR4 gene
T1745 84-110 Regulation denotes of TLR4-mediated signaling
T1742 55-59 Protein denotes TLR4
T1730 52-64 Protein denotes of TLR4 gene
R1314 T1725 T1745 causeOf TLR4-mediated,of TLR4-mediated signaling
R1319 T1730 T1754 themeOf of TLR4 gene,the transcription of TLR4 gene

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1611 87-100 JJ denotes TLR4-mediated
T1610 84-86 IN denotes of
T1609 73-83 NN denotes activation
T1608 69-72 DT denotes the
T1607 65-68 CC denotes and
T1606 60-64 NN denotes gene
T1605 55-59 CD denotes TLR4
T1604 52-54 IN denotes of
T1603 38-51 NN denotes transcription
T1602 34-37 DT denotes the
T1601 25-33 VBD denotes detected
T1600 22-24 PRP denotes we
T1599 20-21 , denotes ,
T1598 15-20 NN denotes study
T1597 7-14 JJ denotes present
T1596 3-6 DT denotes the
T1595 0-2 IN denotes In
T1621 158-159 . denotes .
T1620 155-158 NNP denotes ICH
T1619 142-154 JJ denotes experimental
T1618 139-141 TO denotes to
T1617 129-138 VBN denotes subjected
T1616 122-128 NNS denotes brains
T1615 118-121 NN denotes rat
T1614 114-117 DT denotes the
T1613 111-113 IN denotes in
T1612 101-110 VBG denotes signaling
R1234 T1595 T1601 prep In,detected
R1235 T1596 T1598 det the,study
R1236 T1597 T1598 amod present,study
R1237 T1598 T1595 pobj study,In
R1238 T1599 T1601 punct ",",detected
R1239 T1600 T1601 nsubj we,detected
R1240 T1601 T1601 ROOT detected,detected
R1241 T1602 T1603 det the,transcription
R1242 T1603 T1601 dobj transcription,detected
R1243 T1604 T1603 prep of,transcription
R1244 T1605 T1606 nummod TLR4,gene
R1245 T1606 T1604 pobj gene,of
R1246 T1607 T1603 cc and,transcription
R1247 T1608 T1609 det the,activation
R1248 T1609 T1603 conj activation,transcription
R1249 T1610 T1609 prep of,activation
R1250 T1611 T1612 amod TLR4-mediated,signaling
R1251 T1612 T1610 pobj signaling,of
R1252 T1613 T1609 prep in,activation
R1253 T1614 T1616 det the,brains
R1254 T1615 T1616 compound rat,brains
R1255 T1616 T1613 pobj brains,in
R1256 T1617 T1603 acl subjected,transcription
R1257 T1618 T1617 prep to,subjected
R1258 T1619 T1620 amod experimental,ICH
R1259 T1620 T1618 pobj ICH,to
R1260 T1621 T1601 punct .,detected

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T921 38-51 Transcription denotes transcription
T920 87-91 Protein denotes TLR4
T919 55-64 Protein denotes TLR4 gene
R561 T919 T921 themeOf TLR4 gene,transcription

testone

Id Subject Object Predicate Lexical cue
T804 38-51 Transcription denotes transcription
T800 87-91 Protein denotes TLR4
T799 55-59 Protein denotes TLR4
R543 T799 T804 themeOf TLR4,transcription

test3

Id Subject Object Predicate Lexical cue
T819 87-91 Protein denotes TLR4
T818 55-59 Protein denotes TLR4
T817 38-51 Transcription denotes transcription
T809 87-91 Protein denotes TLR4
T808 55-59 Protein denotes TLR4
R544 T818 T817 themeOf TLR4,transcription