PMC:2817507 / 3197-3356 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/2817507","sourcedb":"PMC","sourceid":"2817507","source_url":"http://www.ncbi.nlm.nih.gov/pmc/2817507","text":"In the present study, we detected the transcription of TLR4 gene and the activation of TLR4-mediated signaling in the rat brains subjected to experimental ICH.","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T1256","span":{"begin":155,"end":158},"obj":"NN"},{"id":"T1255","span":{"begin":142,"end":154},"obj":"JJ"},{"id":"T1254","span":{"begin":139,"end":141},"obj":"TO"},{"id":"T1253","span":{"begin":129,"end":138},"obj":"VB"},{"id":"T1252","span":{"begin":122,"end":128},"obj":"NN"},{"id":"T1251","span":{"begin":118,"end":121},"obj":"NN"},{"id":"T1250","span":{"begin":114,"end":117},"obj":"DT"},{"id":"T1249","span":{"begin":111,"end":113},"obj":"IN"},{"id":"T1248","span":{"begin":101,"end":110},"obj":"NN"},{"id":"T1247","span":{"begin":87,"end":100},"obj":"JJ"},{"id":"T1246","span":{"begin":84,"end":86},"obj":"IN"},{"id":"T1245","span":{"begin":73,"end":83},"obj":"NN"},{"id":"T1244","span":{"begin":69,"end":72},"obj":"DT"},{"id":"T1243","span":{"begin":65,"end":68},"obj":"CC"},{"id":"T1242","span":{"begin":60,"end":64},"obj":"NN"},{"id":"T1241","span":{"begin":55,"end":59},"obj":"NN"},{"id":"T1240","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T1239","span":{"begin":38,"end":51},"obj":"NN"},{"id":"T1238","span":{"begin":34,"end":37},"obj":"DT"},{"id":"T1237","span":{"begin":25,"end":33},"obj":"VB"},{"id":"T1236","span":{"begin":22,"end":24},"obj":"PRP"},{"id":"T1235","span":{"begin":20,"end":21},"obj":"-COMMA-"},{"id":"T1234","span":{"begin":15,"end":20},"obj":"NN"},{"id":"T1233","span":{"begin":7,"end":14},"obj":"JJ"},{"id":"T1232","span":{"begin":3,"end":6},"obj":"DT"},{"id":"T1231","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R872","pred":"arg2Of","subj":"T1234","obj":"T1231"},{"id":"R873","pred":"arg1Of","subj":"T1234","obj":"T1232"},{"id":"R874","pred":"arg1Of","subj":"T1234","obj":"T1233"},{"id":"R875","pred":"arg1Of","subj":"T1236","obj":"T1237"},{"id":"R876","pred":"arg1Of","subj":"T1237","obj":"T1231"},{"id":"R877","pred":"arg1Of","subj":"T1237","obj":"T1235"},{"id":"R878","pred":"arg1Of","subj":"T1239","obj":"T1238"},{"id":"R879","pred":"arg1Of","subj":"T1239","obj":"T1240"},{"id":"R880","pred":"arg1Of","subj":"T1239","obj":"T1243"},{"id":"R881","pred":"arg2Of","subj":"T1242","obj":"T1240"},{"id":"R882","pred":"arg1Of","subj":"T1242","obj":"T1241"},{"id":"R883","pred":"arg2Of","subj":"T1243","obj":"T1237"},{"id":"R884","pred":"arg2Of","subj":"T1245","obj":"T1243"},{"id":"R885","pred":"arg1Of","subj":"T1245","obj":"T1244"},{"id":"R886","pred":"arg1Of","subj":"T1245","obj":"T1246"},{"id":"R887","pred":"arg1Of","subj":"T1245","obj":"T1249"},{"id":"R888","pred":"arg2Of","subj":"T1248","obj":"T1246"},{"id":"R889","pred":"arg1Of","subj":"T1248","obj":"T1247"},{"id":"R890","pred":"arg2Of","subj":"T1252","obj":"T1249"},{"id":"R891","pred":"arg1Of","subj":"T1252","obj":"T1250"},{"id":"R892","pred":"arg1Of","subj":"T1252","obj":"T1251"},{"id":"R893","pred":"arg2Of","subj":"T1252","obj":"T1253"},{"id":"R894","pred":"arg1Of","subj":"T1253","obj":"T1254"},{"id":"R895","pred":"arg2Of","subj":"T1256","obj":"T1254"},{"id":"R896","pred":"arg1Of","subj":"T1256","obj":"T1255"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T1256","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1255","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1254","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1253","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1252","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1251","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1250","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1249","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1248","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1247","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1246","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1245","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1244","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1243","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1242","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1241","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1240","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1239","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1238","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1237","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1236","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1235","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1234","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1233","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1232","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1231","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T865","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T864","span":{"begin":55,"end":59},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T865","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T864","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1654","span":{"begin":87,"end":91},"obj":"http://www.uniprot.org/uniprot/O00206"},{"id":"T1653","span":{"begin":55,"end":59},"obj":"http://www.uniprot.org/uniprot/O00206"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T1654","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T1653","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-BP","denotations":[{"id":"T881","span":{"begin":38,"end":51},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T875","span":{"begin":101,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0023052"}],"attributes":[{"subj":"T881","pred":"source","obj":"GO-BP"},{"subj":"T875","pred":"source","obj":"GO-BP"}]},{"project":"sentences","denotations":[{"id":"T849","span":{"begin":0,"end":159},"obj":"Sentence"},{"id":"T24","span":{"begin":0,"end":159},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T849","pred":"source","obj":"sentences"},{"subj":"T24","pred":"source","obj":"sentences"}]},{"project":"simple1","denotations":[{"id":"T928","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T927","span":{"begin":55,"end":59},"obj":"Protein"}],"attributes":[{"subj":"T928","pred":"source","obj":"simple1"},{"subj":"T927","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T1722","span":{"begin":38,"end":51},"obj":"Transcription"},{"id":"T1716","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T1715","span":{"begin":55,"end":59},"obj":"Protein"}],"relations":[{"id":"R1312","pred":"themeOf","subj":"T1715","obj":"T1722"}],"attributes":[{"subj":"T1722","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T1716","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T1715","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T1665","span":{"begin":38,"end":51},"obj":"Transcription"},{"id":"T1661","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T1660","span":{"begin":55,"end":59},"obj":"Protein"}],"relations":[{"id":"R1290","pred":"themeOf","subj":"T1660","obj":"T1665"}],"attributes":[{"subj":"T1665","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T1661","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T1660","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T1675","span":{"begin":38,"end":51},"obj":"Transcription"},{"id":"T1670","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T1669","span":{"begin":55,"end":59},"obj":"Protein"}],"relations":[{"id":"R1293","pred":"themeOf","subj":"T1669","obj":"T1675"}],"attributes":[{"subj":"T1675","pred":"source","obj":"DLUT931"},{"subj":"T1670","pred":"source","obj":"DLUT931"},{"subj":"T1669","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T1725","span":{"begin":87,"end":100},"obj":"Protein"},{"id":"T1754","span":{"begin":34,"end":64},"obj":"Transcription"},{"id":"T1745","span":{"begin":84,"end":110},"obj":"Regulation"},{"id":"T1742","span":{"begin":55,"end":59},"obj":"Protein"},{"id":"T1730","span":{"begin":52,"end":64},"obj":"Protein"}],"relations":[{"id":"R1314","pred":"causeOf","subj":"T1725","obj":"T1745"},{"id":"R1319","pred":"themeOf","subj":"T1730","obj":"T1754"}],"attributes":[{"subj":"T1725","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T1754","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T1745","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T1742","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T1730","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1611","span":{"begin":87,"end":100},"obj":"JJ"},{"id":"T1610","span":{"begin":84,"end":86},"obj":"IN"},{"id":"T1609","span":{"begin":73,"end":83},"obj":"NN"},{"id":"T1608","span":{"begin":69,"end":72},"obj":"DT"},{"id":"T1607","span":{"begin":65,"end":68},"obj":"CC"},{"id":"T1606","span":{"begin":60,"end":64},"obj":"NN"},{"id":"T1605","span":{"begin":55,"end":59},"obj":"CD"},{"id":"T1604","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T1603","span":{"begin":38,"end":51},"obj":"NN"},{"id":"T1602","span":{"begin":34,"end":37},"obj":"DT"},{"id":"T1601","span":{"begin":25,"end":33},"obj":"VBD"},{"id":"T1600","span":{"begin":22,"end":24},"obj":"PRP"},{"id":"T1599","span":{"begin":20,"end":21},"obj":","},{"id":"T1598","span":{"begin":15,"end":20},"obj":"NN"},{"id":"T1597","span":{"begin":7,"end":14},"obj":"JJ"},{"id":"T1596","span":{"begin":3,"end":6},"obj":"DT"},{"id":"T1595","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T1621","span":{"begin":158,"end":159},"obj":"."},{"id":"T1620","span":{"begin":155,"end":158},"obj":"NNP"},{"id":"T1619","span":{"begin":142,"end":154},"obj":"JJ"},{"id":"T1618","span":{"begin":139,"end":141},"obj":"TO"},{"id":"T1617","span":{"begin":129,"end":138},"obj":"VBN"},{"id":"T1616","span":{"begin":122,"end":128},"obj":"NNS"},{"id":"T1615","span":{"begin":118,"end":121},"obj":"NN"},{"id":"T1614","span":{"begin":114,"end":117},"obj":"DT"},{"id":"T1613","span":{"begin":111,"end":113},"obj":"IN"},{"id":"T1612","span":{"begin":101,"end":110},"obj":"VBG"}],"relations":[{"id":"R1234","pred":"prep","subj":"T1595","obj":"T1601"},{"id":"R1235","pred":"det","subj":"T1596","obj":"T1598"},{"id":"R1236","pred":"amod","subj":"T1597","obj":"T1598"},{"id":"R1237","pred":"pobj","subj":"T1598","obj":"T1595"},{"id":"R1238","pred":"punct","subj":"T1599","obj":"T1601"},{"id":"R1239","pred":"nsubj","subj":"T1600","obj":"T1601"},{"id":"R1240","pred":"ROOT","subj":"T1601","obj":"T1601"},{"id":"R1241","pred":"det","subj":"T1602","obj":"T1603"},{"id":"R1242","pred":"dobj","subj":"T1603","obj":"T1601"},{"id":"R1243","pred":"prep","subj":"T1604","obj":"T1603"},{"id":"R1244","pred":"nummod","subj":"T1605","obj":"T1606"},{"id":"R1245","pred":"pobj","subj":"T1606","obj":"T1604"},{"id":"R1246","pred":"cc","subj":"T1607","obj":"T1603"},{"id":"R1247","pred":"det","subj":"T1608","obj":"T1609"},{"id":"R1248","pred":"conj","subj":"T1609","obj":"T1603"},{"id":"R1249","pred":"prep","subj":"T1610","obj":"T1609"},{"id":"R1250","pred":"amod","subj":"T1611","obj":"T1612"},{"id":"R1251","pred":"pobj","subj":"T1612","obj":"T1610"},{"id":"R1252","pred":"prep","subj":"T1613","obj":"T1609"},{"id":"R1253","pred":"det","subj":"T1614","obj":"T1616"},{"id":"R1254","pred":"compound","subj":"T1615","obj":"T1616"},{"id":"R1255","pred":"pobj","subj":"T1616","obj":"T1613"},{"id":"R1256","pred":"acl","subj":"T1617","obj":"T1603"},{"id":"R1257","pred":"prep","subj":"T1618","obj":"T1617"},{"id":"R1258","pred":"amod","subj":"T1619","obj":"T1620"},{"id":"R1259","pred":"pobj","subj":"T1620","obj":"T1618"},{"id":"R1260","pred":"punct","subj":"T1621","obj":"T1601"}],"attributes":[{"subj":"T1611","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1610","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1609","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1608","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1607","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1606","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1605","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1604","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1603","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1602","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1601","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1600","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1599","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1598","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1597","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1596","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1595","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1621","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1620","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1619","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1618","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1617","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1616","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1615","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1614","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1613","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1612","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T921","span":{"begin":38,"end":51},"obj":"Transcription"},{"id":"T920","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T919","span":{"begin":55,"end":64},"obj":"Protein"}],"relations":[{"id":"R561","pred":"themeOf","subj":"T919","obj":"T921"}],"attributes":[{"subj":"T921","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T920","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T919","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T804","span":{"begin":38,"end":51},"obj":"Transcription"},{"id":"T800","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T799","span":{"begin":55,"end":59},"obj":"Protein"}],"relations":[{"id":"R543","pred":"themeOf","subj":"T799","obj":"T804"}],"attributes":[{"subj":"T804","pred":"source","obj":"testone"},{"subj":"T800","pred":"source","obj":"testone"},{"subj":"T799","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T819","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T818","span":{"begin":55,"end":59},"obj":"Protein"},{"id":"T817","span":{"begin":38,"end":51},"obj":"Transcription"},{"id":"T809","span":{"begin":87,"end":91},"obj":"Protein"},{"id":"T808","span":{"begin":55,"end":59},"obj":"Protein"}],"relations":[{"id":"R544","pred":"themeOf","subj":"T818","obj":"T817"}],"attributes":[{"subj":"T819","pred":"source","obj":"test3"},{"subj":"T818","pred":"source","obj":"test3"},{"subj":"T817","pred":"source","obj":"test3"},{"subj":"T809","pred":"source","obj":"test3"},{"subj":"T808","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#ecd793","default":true},{"id":"bionlp-st-ge-2016-test-proteins","color":"#bd93ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#93eca3"},{"id":"GO-BP","color":"#ec939c"},{"id":"sentences","color":"#93b6ec"},{"id":"simple1","color":"#d0ec93"},{"id":"BioNLP16_DUT","color":"#ec93ea"},{"id":"BioNLP16_Messiy","color":"#93ecd4"},{"id":"DLUT931","color":"#ecba93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#a093ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#a0ec93"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ec93ba"},{"id":"testone","color":"#93d4ec"},{"id":"test3","color":"#ecea93"}]}]}}