PMC:2806624 / 34608-34755 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T14541","span":{"begin":0,"end":11},"obj":"RB"},{"id":"T14542","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T14543","span":{"begin":13,"end":15},"obj":"PRP"},{"id":"T14544","span":{"begin":16,"end":19},"obj":"VB"},{"id":"T14545","span":{"begin":20,"end":25},"obj":"VB"},{"id":"T14546","span":{"begin":26,"end":30},"obj":"IN"},{"id":"T14547","span":{"begin":31,"end":36},"obj":"NN"},{"id":"T14548","span":{"begin":37,"end":46},"obj":"VB"},{"id":"T14549","span":{"begin":47,"end":51},"obj":"NN"},{"id":"T14550","span":{"begin":52,"end":55},"obj":"CC"},{"id":"T14551","span":{"begin":56,"end":61},"obj":"NN"},{"id":"T14552","span":{"begin":62,"end":66},"obj":"NN"},{"id":"T14553","span":{"begin":67,"end":77},"obj":"NN"},{"id":"T14554","span":{"begin":78,"end":80},"obj":"IN"},{"id":"T14555","span":{"begin":81,"end":93},"obj":"JJ"},{"id":"T14556","span":{"begin":94,"end":98},"obj":"JJ"},{"id":"T14557","span":{"begin":99,"end":100},"obj":"NN"},{"id":"T14558","span":{"begin":101,"end":106},"obj":"NN"},{"id":"T14559","span":{"begin":107,"end":109},"obj":"IN"},{"id":"T14560","span":{"begin":110,"end":117},"obj":"VB"},{"id":"T14561","span":{"begin":118,"end":120},"obj":"TO"},{"id":"T14562","span":{"begin":121,"end":126},"obj":"PRP-DOLLAR-"},{"id":"T14563","span":{"begin":127,"end":137},"obj":"JJ"},{"id":"T14564","span":{"begin":138,"end":146},"obj":"NN"}],"relations":[{"id":"R11349","pred":"arg1Of","subj":"T14543","obj":"T14544"},{"id":"R11350","pred":"arg2Of","subj":"T14543","obj":"T14545"},{"id":"R11351","pred":"arg1Of","subj":"T14545","obj":"T14541"},{"id":"R11352","pred":"arg1Of","subj":"T14545","obj":"T14542"},{"id":"R11353","pred":"arg2Of","subj":"T14545","obj":"T14544"},{"id":"R11354","pred":"arg1Of","subj":"T14547","obj":"T14548"},{"id":"R11355","pred":"arg1Of","subj":"T14547","obj":"T14560"},{"id":"R11356","pred":"arg3Of","subj":"T14548","obj":"T14545"},{"id":"R11357","pred":"arg1Of","subj":"T14548","obj":"T14546"},{"id":"R11358","pred":"arg1Of","subj":"T14548","obj":"T14559"},{"id":"R11359","pred":"arg1Of","subj":"T14549","obj":"T14550"},{"id":"R11360","pred":"arg2Of","subj":"T14551","obj":"T14550"},{"id":"R11361","pred":"arg2Of","subj":"T14553","obj":"T14548"},{"id":"R11362","pred":"arg1Of","subj":"T14553","obj":"T14549"},{"id":"R11363","pred":"arg1Of","subj":"T14553","obj":"T14551"},{"id":"R11364","pred":"arg1Of","subj":"T14553","obj":"T14552"},{"id":"R11365","pred":"arg1Of","subj":"T14553","obj":"T14554"},{"id":"R11366","pred":"arg2Of","subj":"T14558","obj":"T14554"},{"id":"R11367","pred":"arg1Of","subj":"T14558","obj":"T14555"},{"id":"R11368","pred":"arg1Of","subj":"T14558","obj":"T14556"},{"id":"R11369","pred":"arg1Of","subj":"T14558","obj":"T14557"},{"id":"R11370","pred":"arg2Of","subj":"T14560","obj":"T14559"},{"id":"R11371","pred":"arg1Of","subj":"T14560","obj":"T14561"},{"id":"R11372","pred":"arg2Of","subj":"T14564","obj":"T14561"},{"id":"R11373","pred":"arg1Of","subj":"T14564","obj":"T14562"},{"id":"R11374","pred":"arg1Of","subj":"T14564","obj":"T14563"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T16884","span":{"begin":0,"end":11},"obj":"RB"},{"id":"T16885","span":{"begin":11,"end":12},"obj":","},{"id":"T16886","span":{"begin":13,"end":15},"obj":"PRP"},{"id":"T16887","span":{"begin":16,"end":19},"obj":"VBD"},{"id":"T16888","span":{"begin":20,"end":25},"obj":"VBN"},{"id":"T16889","span":{"begin":26,"end":30},"obj":"IN"},{"id":"T16890","span":{"begin":31,"end":36},"obj":"JJ"},{"id":"T16891","span":{"begin":37,"end":46},"obj":"NNS"},{"id":"T16892","span":{"begin":47,"end":51},"obj":"NN"},{"id":"T16893","span":{"begin":52,"end":55},"obj":"CC"},{"id":"T16894","span":{"begin":56,"end":61},"obj":"JJ"},{"id":"T16895","span":{"begin":62,"end":66},"obj":"NN"},{"id":"T16896","span":{"begin":67,"end":77},"obj":"NN"},{"id":"T16897","span":{"begin":78,"end":80},"obj":"IN"},{"id":"T16898","span":{"begin":81,"end":93},"obj":"JJ"},{"id":"T16899","span":{"begin":94,"end":97},"obj":"NNP"},{"id":"T16900","span":{"begin":97,"end":98},"obj":"CD"},{"id":"T16901","span":{"begin":99,"end":100},"obj":"NNP"},{"id":"T16902","span":{"begin":101,"end":106},"obj":"NNS"},{"id":"T16903","span":{"begin":107,"end":109},"obj":"IN"},{"id":"T16904","span":{"begin":110,"end":117},"obj":"JJ"},{"id":"T16905","span":{"begin":118,"end":120},"obj":"TO"},{"id":"T16906","span":{"begin":121,"end":126},"obj":"PRP$"},{"id":"T16907","span":{"begin":127,"end":137},"obj":"JJ"},{"id":"T16908","span":{"begin":138,"end":146},"obj":"NN"},{"id":"T16909","span":{"begin":146,"end":147},"obj":"."}],"relations":[{"id":"R13374","pred":"advmod","subj":"T16884","obj":"T16888"},{"id":"R13375","pred":"punct","subj":"T16885","obj":"T16888"},{"id":"R13377","pred":"nsubjpass","subj":"T16886","obj":"T16888"},{"id":"R13378","pred":"auxpass","subj":"T16887","obj":"T16888"},{"id":"R13380","pred":"ROOT","subj":"T16888","obj":"T16888"},{"id":"R13381","pred":"mark","subj":"T16889","obj":"T16891"},{"id":"R13383","pred":"nsubj","subj":"T16890","obj":"T16891"},{"id":"R13384","pred":"ccomp","subj":"T16891","obj":"T16888"},{"id":"R13385","pred":"dobj","subj":"T16892","obj":"T16891"},{"id":"R13387","pred":"cc","subj":"T16893","obj":"T16892"},{"id":"R13388","pred":"amod","subj":"T16894","obj":"T16896"},{"id":"R13389","pred":"compound","subj":"T16895","obj":"T16896"},{"id":"R13391","pred":"conj","subj":"T16896","obj":"T16892"},{"id":"R13392","pred":"prep","subj":"T16897","obj":"T16896"},{"id":"R13393","pred":"amod","subj":"T16898","obj":"T16902"},{"id":"R13395","pred":"compound","subj":"T16899","obj":"T16902"},{"id":"R13396","pred":"nummod","subj":"T16900","obj":"T16902"},{"id":"R13397","pred":"compound","subj":"T16901","obj":"T16902"},{"id":"R13399","pred":"pobj","subj":"T16902","obj":"T16897"},{"id":"R13400","pred":"prep","subj":"T16903","obj":"T16891"},{"id":"R13401","pred":"pcomp","subj":"T16904","obj":"T16903"},{"id":"R13403","pred":"prep","subj":"T16905","obj":"T16904"},{"id":"R13404","pred":"poss","subj":"T16906","obj":"T16908"},{"id":"R13405","pred":"amod","subj":"T16907","obj":"T16908"},{"id":"R13407","pred":"pobj","subj":"T16908","obj":"T16905"},{"id":"R13408","pred":"punct","subj":"T16909","obj":"T16888"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T17582","span":{"begin":62,"end":77},"obj":"http://purl.obolibrary.org/obo/GO_0010467"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T17680","span":{"begin":110,"end":117},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T17685","span":{"begin":47,"end":51},"obj":"http://purl.obolibrary.org/obo/GO_0005134"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T17728","span":{"begin":101,"end":106},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    sentences

    {"project":"sentences","denotations":[{"id":"T12896","span":{"begin":0,"end":147},"obj":"Sentence"},{"id":"T233","span":{"begin":0,"end":147},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T18495","span":{"begin":31,"end":36},"obj":"Protein"},{"id":"T18496","span":{"begin":37,"end":46},"obj":"Positive_regulation"},{"id":"T18497","span":{"begin":37,"end":46},"obj":"Positive_regulation"},{"id":"T18498","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T18499","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T18500","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T18501","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T18502","span":{"begin":94,"end":97},"obj":"Protein"},{"id":"T18503","span":{"begin":110,"end":117},"obj":"Binding"}],"relations":[{"id":"R14556","pred":"themeOf","subj":"T18495","obj":"T18503"},{"id":"R14558","pred":"themeOf","subj":"T18498","obj":"T18500"},{"id":"R14559","pred":"themeOf","subj":"T18499","obj":"T18501"},{"id":"R14560","pred":"themeOf","subj":"T18500","obj":"T18496"},{"id":"R14561","pred":"themeOf","subj":"T18501","obj":"T18497"},{"id":"R14562","pred":"causeOf","subj":"T18503","obj":"T18496"},{"id":"R14563","pred":"causeOf","subj":"T18503","obj":"T18497"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T13030","span":{"begin":37,"end":46},"obj":"Positive_regulation"},{"id":"T13031","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T13032","span":{"begin":110,"end":117},"obj":"Binding"},{"id":"T13033","span":{"begin":37,"end":46},"obj":"Positive_regulation"},{"id":"T13034","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T13070","span":{"begin":31,"end":36},"obj":"Protein"},{"id":"T13071","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T13073","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T13074","span":{"begin":94,"end":97},"obj":"Protein"}],"relations":[{"id":"R9865","pred":"themeOf","subj":"T13031","obj":"T13030"},{"id":"R9866","pred":"causeOf","subj":"T13032","obj":"T13030"},{"id":"R9867","pred":"causeOf","subj":"T13032","obj":"T13033"},{"id":"R9868","pred":"themeOf","subj":"T13034","obj":"T13033"},{"id":"R9890","pred":"themeOf","subj":"T13070","obj":"T13032"},{"id":"R9891","pred":"themeOf","subj":"T13071","obj":"T13031"},{"id":"R9893","pred":"themeOf","subj":"T13073","obj":"T13034"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T15349","span":{"begin":31,"end":36},"obj":"Q01196"},{"id":"T15350","span":{"begin":47,"end":51},"obj":"P60568"},{"id":"T15351","span":{"begin":56,"end":61},"obj":"P01579"},{"id":"T15352","span":{"begin":94,"end":97},"obj":"P01730"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}

    test2

    {"project":"test2","denotations":[{"id":"T12740","span":{"begin":31,"end":36},"obj":"Protein"},{"id":"T12741","span":{"begin":37,"end":46},"obj":"Positive_regulation"},{"id":"T12742","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T12743","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T12744","span":{"begin":67,"end":77},"obj":"Gene_expression"},{"id":"T12745","span":{"begin":94,"end":97},"obj":"Protein"},{"id":"T12746","span":{"begin":110,"end":117},"obj":"Binding"}],"relations":[{"id":"R9754","pred":"themeOf","subj":"T12740","obj":"T12746"},{"id":"R9755","pred":"causeOf","subj":"T12740","obj":"T12741"},{"id":"R9756","pred":"themeOf","subj":"T12742","obj":"T12744"},{"id":"R9757","pred":"themeOf","subj":"T12743","obj":"T12744"},{"id":"R9758","pred":"themeOf","subj":"T12744","obj":"T12741"},{"id":"R9759","pred":"causeOf","subj":"T12746","obj":"T12741"}],"text":"Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter."}