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PMC:2806624 / 34608-34755 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14541 0-11 RB denotes Furthermore
T14542 11-12 -COMMA- denotes ,
T14543 13-15 PRP denotes it
T14544 16-19 VB denotes was
T14545 20-25 VB denotes shown
T14546 26-30 IN denotes that
T14547 31-36 NN denotes Runx1
T14548 37-46 VB denotes activates
T14549 47-51 NN denotes IL-2
T14550 52-55 CC denotes and
T14551 56-61 NN denotes IFN-γ
T14552 62-66 NN denotes gene
T14553 67-77 NN denotes expression
T14554 78-80 IN denotes in
T14555 81-93 JJ denotes conventional
T14556 94-98 JJ denotes CD4+
T14557 99-100 NN denotes T
T14558 101-106 NN denotes cells
T14559 107-109 IN denotes by
T14560 110-117 VB denotes binding
T14561 118-120 TO denotes to
T14562 121-126 PRP-DOLLAR- denotes their
T14563 127-137 JJ denotes respective
T14564 138-146 NN denotes promoter
R11349 T14543 T14544 arg1Of it,was
R11350 T14543 T14545 arg2Of it,shown
R11351 T14545 T14541 arg1Of shown,Furthermore
R11352 T14545 T14542 arg1Of shown,","
R11353 T14545 T14544 arg2Of shown,was
R11354 T14547 T14548 arg1Of Runx1,activates
R11355 T14547 T14560 arg1Of Runx1,binding
R11356 T14548 T14545 arg3Of activates,shown
R11357 T14548 T14546 arg1Of activates,that
R11358 T14548 T14559 arg1Of activates,by
R11359 T14549 T14550 arg1Of IL-2,and
R11360 T14551 T14550 arg2Of IFN-γ,and
R11361 T14553 T14548 arg2Of expression,activates
R11362 T14553 T14549 arg1Of expression,IL-2
R11363 T14553 T14551 arg1Of expression,IFN-γ
R11364 T14553 T14552 arg1Of expression,gene
R11365 T14553 T14554 arg1Of expression,in
R11366 T14558 T14554 arg2Of cells,in
R11367 T14558 T14555 arg1Of cells,conventional
R11368 T14558 T14556 arg1Of cells,CD4+
R11369 T14558 T14557 arg1Of cells,T
R11370 T14560 T14559 arg2Of binding,by
R11371 T14560 T14561 arg1Of binding,to
R11372 T14564 T14561 arg2Of promoter,to
R11373 T14564 T14562 arg1Of promoter,their
R11374 T14564 T14563 arg1Of promoter,respective

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16884 0-11 RB denotes Furthermore
T16885 11-12 , denotes ,
T16886 13-15 PRP denotes it
T16887 16-19 VBD denotes was
T16888 20-25 VBN denotes shown
T16889 26-30 IN denotes that
T16890 31-36 JJ denotes Runx1
T16891 37-46 NNS denotes activates
T16892 47-51 NN denotes IL-2
T16893 52-55 CC denotes and
T16894 56-61 JJ denotes IFN-γ
T16895 62-66 NN denotes gene
T16896 67-77 NN denotes expression
T16897 78-80 IN denotes in
T16898 81-93 JJ denotes conventional
T16899 94-97 NNP denotes CD4
T16900 97-98 CD denotes +
T16901 99-100 NNP denotes T
T16902 101-106 NNS denotes cells
T16903 107-109 IN denotes by
T16904 110-117 JJ denotes binding
T16905 118-120 TO denotes to
T16906 121-126 PRP$ denotes their
T16907 127-137 JJ denotes respective
T16908 138-146 NN denotes promoter
T16909 146-147 . denotes .
R13374 T16884 T16888 advmod Furthermore,shown
R13375 T16885 T16888 punct ",",shown
R13377 T16886 T16888 nsubjpass it,shown
R13378 T16887 T16888 auxpass was,shown
R13380 T16888 T16888 ROOT shown,shown
R13381 T16889 T16891 mark that,activates
R13383 T16890 T16891 nsubj Runx1,activates
R13384 T16891 T16888 ccomp activates,shown
R13385 T16892 T16891 dobj IL-2,activates
R13387 T16893 T16892 cc and,IL-2
R13388 T16894 T16896 amod IFN-γ,expression
R13389 T16895 T16896 compound gene,expression
R13391 T16896 T16892 conj expression,IL-2
R13392 T16897 T16896 prep in,expression
R13393 T16898 T16902 amod conventional,cells
R13395 T16899 T16902 compound CD4,cells
R13396 T16900 T16902 nummod +,cells
R13397 T16901 T16902 compound T,cells
R13399 T16902 T16897 pobj cells,in
R13400 T16903 T16891 prep by,activates
R13401 T16904 T16903 pcomp binding,by
R13403 T16905 T16904 prep to,binding
R13404 T16906 T16908 poss their,promoter
R13405 T16907 T16908 amod respective,promoter
R13407 T16908 T16905 pobj promoter,to
R13408 T16909 T16888 punct .,shown

GO-BP

Id Subject Object Predicate Lexical cue
T17582 62-77 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

GO-MF

Id Subject Object Predicate Lexical cue
T17680 110-117 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T17685 47-51 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2

GO-CC

Id Subject Object Predicate Lexical cue
T17728 101-106 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T12896 0-147 Sentence denotes Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter.
T233 0-147 Sentence denotes Furthermore, it was shown that Runx1 activates IL-2 and IFN-γ gene expression in conventional CD4+ T cells by binding to their respective promoter.

events-check-again

Id Subject Object Predicate Lexical cue
T18495 31-36 Protein denotes Runx1
T18496 37-46 Positive_regulation denotes activates
T18497 37-46 Positive_regulation denotes activates
T18498 47-51 Protein denotes IL-2
T18499 56-61 Protein denotes IFN-γ
T18500 67-77 Gene_expression denotes expression
T18501 67-77 Gene_expression denotes expression
T18502 94-97 Protein denotes CD4
T18503 110-117 Binding denotes binding
R14556 T18495 T18503 themeOf Runx1,binding
R14558 T18498 T18500 themeOf IL-2,expression
R14559 T18499 T18501 themeOf IFN-γ,expression
R14560 T18500 T18496 themeOf expression,activates
R14561 T18501 T18497 themeOf expression,activates
R14562 T18503 T18496 causeOf binding,activates
R14563 T18503 T18497 causeOf binding,activates

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T13030 37-46 Positive_regulation denotes activates
T13031 67-77 Gene_expression denotes expression
T13032 110-117 Binding denotes binding
T13033 37-46 Positive_regulation denotes activates
T13034 67-77 Gene_expression denotes expression
T13070 31-36 Protein denotes Runx1
T13071 47-51 Protein denotes IL-2
T13073 56-61 Protein denotes IFN-γ
T13074 94-97 Protein denotes CD4
R9865 T13031 T13030 themeOf expression,activates
R9866 T13032 T13030 causeOf binding,activates
R9867 T13032 T13033 causeOf binding,activates
R9868 T13034 T13033 themeOf expression,activates
R9890 T13070 T13032 themeOf Runx1,binding
R9891 T13071 T13031 themeOf IL-2,expression
R9893 T13073 T13034 themeOf IFN-γ,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15349 31-36 Q01196 denotes Runx1
T15350 47-51 P60568 denotes IL-2
T15351 56-61 P01579 denotes IFN-γ
T15352 94-97 P01730 denotes CD4

test2

Id Subject Object Predicate Lexical cue
T12740 31-36 Protein denotes Runx1
T12741 37-46 Positive_regulation denotes activates
T12742 47-51 Protein denotes IL-2
T12743 56-61 Protein denotes IFN-γ
T12744 67-77 Gene_expression denotes expression
T12745 94-97 Protein denotes CD4
T12746 110-117 Binding denotes binding
R9754 T12740 T12746 themeOf Runx1,binding
R9755 T12740 T12741 causeOf Runx1,activates
R9756 T12742 T12744 themeOf IL-2,expression
R9757 T12743 T12744 themeOf IFN-γ,expression
R9758 T12744 T12741 themeOf expression,activates
R9759 T12746 T12741 causeOf binding,activates