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PMC:194730 / 1843-2543 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1135 8-10 NN denotes A7
T1136 11-13 VBZ denotes is
T1137 14-15 DT denotes a
T1138 47-54 NN denotes protein
T1139 16-20 NN denotes Ca2+
T1140 39-46 VBG denotes binding
T1141 20-21 HYPH denotes -
T1142 22-25 CC denotes and
T1143 26-38 NN denotes phospholipid
T1144 38-39 HYPH denotes -
T1145 54-56 , denotes ,
T1146 56-61 WDT denotes which
T1147 66-74 VBN denotes isolated
T1148 62-65 VBD denotes was
T1149 75-77 IN denotes as
T1150 78-81 DT denotes the
T1151 82-87 NN denotes agent
T1152 88-92 WDT denotes that
T1153 93-101 VBD denotes mediated
T1154 102-113 NN denotes aggregation
T1155 114-116 IN denotes of
T1156 117-127 NN denotes chromaffin
T1157 128-136 NNS denotes granules
T1158 137-140 CC denotes and
T1159 141-147 NN denotes fusion
T1160 148-150 IN denotes of
T1161 151-163 NN denotes phospholipid
T1162 164-173 NNS denotes membranes
T1163 174-176 IN denotes in
T1164 177-180 DT denotes the
T1165 181-189 NN denotes presence
T1166 190-192 IN denotes of
T1167 193-197 NN denotes Ca2+
T1168 197-198 . denotes .
T1169 198-311 sentence denotes This activity led to the proposal of annexin A7's involvement in the exocytotic secretion of catecholamines [1].
T1170 199-203 DT denotes This
T1171 204-212 NN denotes activity
T1172 213-216 VBD denotes led
T1173 217-219 IN denotes to
T1174 220-223 DT denotes the
T1175 224-232 NN denotes proposal
T1176 233-235 IN denotes of
T1177 236-243 NN denotes annexin
T1178 244-246 NN denotes A7
T1179 249-260 NN denotes involvement
T1180 246-248 POS denotes 's
T1181 261-263 IN denotes in
T1182 264-267 DT denotes the
T1183 279-288 NN denotes secretion
T1184 268-278 JJ denotes exocytotic
T1185 289-291 IN denotes of
T1186 292-306 NNS denotes catecholamines
T1187 307-308 -LRB- denotes [
T1188 308-309 CD denotes 1
T1189 309-310 -RRB- denotes ]
T1190 310-311 . denotes .
T1191 311-467 sentence denotes The protein belongs to a family of evolutionarily conserved proteins of a bipartite structure with a variable N-terminal and a conserved C-terminal domain.
T1192 312-315 DT denotes The
T1193 316-323 NN denotes protein
T1194 324-331 VBZ denotes belongs
T1195 332-334 IN denotes to
T1196 335-336 DT denotes a
T1197 337-343 NN denotes family
T1198 344-346 IN denotes of
T1199 347-361 RB denotes evolutionarily
T1200 362-371 VBN denotes conserved
T1201 372-380 NN denotes proteins
T1202 381-383 IN denotes of
T1203 384-385 DT denotes a
T1204 396-405 NN denotes structure
T1205 386-395 JJ denotes bipartite
T1206 406-410 IN denotes with
T1207 411-412 DT denotes a
T1208 413-421 JJ denotes variable
T1209 422-423 NN denotes N
T1210 424-432 JJ denotes terminal
T1211 423-424 HYPH denotes -
T1212 433-436 CC denotes and
T1213 437-438 DT denotes a
T1214 439-448 VBN denotes conserved
T1215 449-450 NN denotes C
T1216 451-459 JJ denotes terminal
T1217 450-451 HYPH denotes -
T1218 460-466 NN denotes domain
T1219 466-467 . denotes .
T1220 467-612 sentence denotes The C-terminal domain is responsible for the Ca2+- and phospholipid-binding, the N-terminal domain appears to confer functional diversity [2-4].
T1221 468-471 DT denotes The
T1222 483-489 NN denotes domain
T1223 472-473 NN denotes C
T1224 474-482 JJ denotes terminal
T1225 473-474 HYPH denotes -
T1226 490-492 VBZ denotes is
T1227 567-574 VBZ denotes appears
T1228 493-504 JJ denotes responsible
T1229 505-508 IN denotes for
T1230 509-512 DT denotes the
T1231 513-517 NN denotes Ca2+
T1232 517-518 HYPH denotes -
T1233 519-522 CC denotes and
T1234 523-535 NN denotes phospholipid
T1235 535-536 HYPH denotes -
T1236 536-543 VBG denotes binding
T1237 543-545 , denotes ,
T1238 545-548 DT denotes the
T1239 560-566 NN denotes domain
T1240 549-550 NN denotes N
T1241 551-559 JJ denotes terminal
T1242 550-551 HYPH denotes -
T1243 575-577 TO denotes to
T1244 578-584 VB denotes confer
T1245 585-595 JJ denotes functional
T1246 596-605 NN denotes diversity
T1247 606-607 -LRB- denotes [
T1248 607-608 CD denotes 2
T1249 608-609 SYM denotes -
T1250 609-610 CD denotes 4
T1251 610-611 -RRB- denotes ]
T1252 611-612 . denotes .
T1253 612-700 sentence denotes The binding to negatively charged phospholipids is thought to be mediated by Ca2+ ions.
T1254 613-616 DT denotes The
T1255 617-624 NN denotes binding
T1256 664-671 VBN denotes thought
T1257 625-627 IN denotes to
T1258 628-638 RB denotes negatively
T1259 639-646 JJ denotes charged
T1260 647-660 NNS denotes phospholipids
T1261 661-663 VBZ denotes is
T1262 672-674 TO denotes to
T1263 678-686 VBN denotes mediated
T1264 675-677 VB denotes be
T1265 687-689 IN denotes by
T1266 690-694 NN denotes Ca2+
T1267 695-699 NNS denotes ions
T1268 699-700 . denotes .
T1134 0-7 NN denotes Annexin
R314 T1134 T1135 compound Annexin,A7
R315 T1135 T1136 nsubj A7,is
R316 T1137 T1138 det a,protein
R317 T1138 T1136 attr protein,is
R318 T1139 T1140 npadvmod Ca2+,binding
R319 T1140 T1138 amod binding,protein
R320 T1141 T1139 punct -,Ca2+
R321 T1142 T1139 cc and,Ca2+
R322 T1143 T1139 conj phospholipid,Ca2+
R323 T1144 T1140 punct -,binding
R324 T1145 T1138 punct ", ",protein
R325 T1146 T1147 dep which,isolated
R326 T1147 T1138 relcl isolated,protein
R327 T1148 T1147 auxpass was,isolated
R328 T1149 T1147 prep as,isolated
R329 T1150 T1151 det the,agent
R330 T1151 T1149 pobj agent,as
R331 T1152 T1153 dep that,mediated
R332 T1153 T1151 relcl mediated,agent
R333 T1154 T1153 dobj aggregation,mediated
R334 T1155 T1154 prep of,aggregation
R335 T1156 T1157 compound chromaffin,granules
R336 T1157 T1155 pobj granules,of
R337 T1158 T1154 cc and,aggregation
R338 T1159 T1154 conj fusion,aggregation
R339 T1160 T1159 prep of,fusion
R340 T1161 T1162 compound phospholipid,membranes
R341 T1162 T1160 pobj membranes,of
R342 T1163 T1154 prep in,aggregation
R343 T1164 T1165 det the,presence
R344 T1165 T1163 pobj presence,in
R345 T1166 T1165 prep of,presence
R346 T1167 T1166 pobj Ca2+,of
R347 T1168 T1136 punct .,is
R348 T1170 T1171 det This,activity
R349 T1171 T1172 nsubj activity,led
R350 T1173 T1172 prep to,led
R351 T1174 T1175 det the,proposal
R352 T1175 T1173 pobj proposal,to
R353 T1176 T1175 prep of,proposal
R354 T1177 T1178 compound annexin,A7
R355 T1178 T1179 poss A7,involvement
R356 T1179 T1176 pobj involvement,of
R357 T1180 T1178 case 's,A7
R358 T1181 T1179 prep in,involvement
R359 T1182 T1183 det the,secretion
R360 T1183 T1181 pobj secretion,in
R361 T1184 T1183 amod exocytotic,secretion
R362 T1185 T1183 prep of,secretion
R363 T1186 T1185 pobj catecholamines,of
R364 T1187 T1188 punct [,1
R365 T1188 T1172 parataxis 1,led
R366 T1189 T1188 punct ],1
R367 T1190 T1172 punct .,led
R368 T1192 T1193 det The,protein
R369 T1193 T1194 nsubj protein,belongs
R370 T1195 T1194 prep to,belongs
R371 T1196 T1197 det a,family
R372 T1197 T1195 pobj family,to
R373 T1198 T1197 prep of,family
R374 T1199 T1200 advmod evolutionarily,conserved
R375 T1200 T1201 amod conserved,proteins
R376 T1201 T1198 pobj proteins,of
R377 T1202 T1201 prep of,proteins
R378 T1203 T1204 det a,structure
R379 T1204 T1202 pobj structure,of
R380 T1205 T1204 amod bipartite,structure
R381 T1206 T1201 prep with,proteins
R382 T1207 T1208 det a,variable
R383 T1208 T1206 pobj variable,with
R384 T1209 T1210 npadvmod N,terminal
R385 T1210 T1208 amod terminal,variable
R386 T1211 T1210 punct -,terminal
R387 T1212 T1208 cc and,variable
R388 T1213 T1214 det a,conserved
R389 T1214 T1208 conj conserved,variable
R390 T1215 T1216 npadvmod C,terminal
R391 T1216 T1214 amod terminal,conserved
R392 T1217 T1216 punct -,terminal
R393 T1218 T1208 appos domain,variable
R394 T1219 T1194 punct .,belongs
R395 T1221 T1222 det The,domain
R396 T1222 T1226 nsubj domain,is
R397 T1223 T1224 npadvmod C,terminal
R398 T1224 T1222 amod terminal,domain
R399 T1225 T1224 punct -,terminal
R400 T1226 T1227 ccomp is,appears
R401 T1228 T1226 acomp responsible,is
R402 T1229 T1228 prep for,responsible
R403 T1230 T1231 det the,Ca2+
R404 T1231 T1229 pobj Ca2+,for
R405 T1232 T1231 punct -,Ca2+
R406 T1233 T1231 cc and,Ca2+
R407 T1234 T1231 conj phospholipid,Ca2+
R408 T1235 T1231 punct -,Ca2+
R409 T1236 T1231 amod binding,Ca2+
R410 T1237 T1227 punct ", ",appears
R411 T1238 T1239 det the,domain
R412 T1239 T1227 nsubj domain,appears
R413 T1240 T1241 npadvmod N,terminal
R414 T1241 T1239 amod terminal,domain
R415 T1242 T1241 punct -,terminal
R416 T1243 T1244 aux to,confer
R417 T1244 T1227 xcomp confer,appears
R418 T1245 T1246 amod functional,diversity
R419 T1246 T1244 dobj diversity,confer
R420 T1247 T1248 punct [,2
R421 T1248 T1227 parataxis 2,appears
R422 T1249 T1250 punct -,4
R423 T1250 T1248 prep 4,2
R424 T1251 T1248 punct ],2
R425 T1252 T1227 punct .,appears
R426 T1254 T1255 det The,binding
R427 T1255 T1256 nsubjpass binding,thought
R428 T1257 T1255 prep to,binding
R429 T1258 T1259 advmod negatively,charged
R430 T1259 T1260 amod charged,phospholipids
R431 T1260 T1257 pobj phospholipids,to
R432 T1261 T1256 auxpass is,thought
R433 T1262 T1263 aux to,mediated
R434 T1263 T1256 xcomp mediated,thought
R435 T1264 T1263 auxpass be,mediated
R436 T1265 T1263 agent by,mediated
R437 T1266 T1267 compound Ca2+,ions
R438 T1267 T1265 pobj ions,by
R439 T1268 T1256 punct .,thought

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T726 0-10 PR:000004080 denotes Annexin A7
T728 26-38 CHEBI:16247 denotes phospholipid
T729 117-136 GO:0042583 denotes chromaffin granules
T730 141-150 _FRAGMENT denotes fusion of
T731 164-173 GO:0061025 denotes membranes
T732 151-163 CHEBI:16247 denotes phospholipid
T733 164-173 GO:0016020 denotes membranes
T734 193-197 CHEBI:29108 denotes Ca2+
T735 236-246 PR:000004080 denotes annexin A7
T736 268-278 GO:0006887 denotes exocytotic
T737 292-306 CHEBI:33567 denotes catecholamines
T738 460-466 SO:0000417 denotes domain
T739 483-489 SO:0000417 denotes domain
T740 513-517 CHEBI:29108 denotes Ca2+
T741 523-535 CHEBI:16247 denotes phospholipid
T742 560-566 SO:0000417 denotes domain
T743 628-660 CHEBI:62643 denotes negatively charged phospholipids
T744 690-699 CHEBI:29108 denotes Ca2+ ions
T727 16-20 CHEBI:29108 denotes Ca2+
R306 T731 T730 _lexicallyChainedTo membranes,fusion of

2_test

Id Subject Object Predicate Lexical cue
12925238-632306-8102376 308-309 632306 denotes 1
12925238-8155692-8102377 607-608 8155692 denotes 2
12925238-9223619-8102377 607-608 9223619 denotes 2
12925238-11917092-8102377 607-608 11917092 denotes 2

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T895 16-20 CHEBI:29108 denotes Ca2+
T896 26-38 CHEBI:16247 denotes phospholipid
T897 39-46 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T898 47-54 CHEBI_PR_EXT:protein denotes protein
T899 117-136 GO:0042583 denotes chromaffin granules
T900 141-150 _FRAGMENT denotes fusion of
T901 164-173 GO:0061025 denotes membranes
T902 151-163 CHEBI:16247 denotes phospholipid
T903 164-173 GO:0016020 denotes membranes
T904 193-197 CHEBI:29108 denotes Ca2+
T905 236-246 PR_EXT:000004080 denotes annexin A7
T906 268-278 GO:0006887 denotes exocytotic
T907 279-288 GO_EXT:secretion_entity_or_process denotes secretion
T908 292-306 CHEBI:33567 denotes catecholamines
T909 316-323 CHEBI_PR_EXT:protein denotes protein
T910 347-371 SO_EXT:biological_conservation_process_or_quality denotes evolutionarily conserved
T911 372-380 CHEBI_PR_EXT:protein denotes proteins
T912 422-432 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminal
T913 439-448 SO_EXT:biological_conservation_process_or_quality denotes conserved
T914 449-459 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T915 460-466 SO_EXT:0000417 denotes domain
T916 472-482 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T917 483-489 SO_EXT:0000417 denotes domain
T918 513-517 CHEBI:29108 denotes Ca2+
T919 523-535 CHEBI:16247 denotes phospholipid
T920 536-543 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T921 549-559 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminal
T922 560-566 SO_EXT:0000417 denotes domain
T923 617-624 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T924 628-660 CHEBI:62643 denotes negatively charged phospholipids
T925 690-699 CHEBI:29108 denotes Ca2+ ions
T894 0-10 PR_EXT:000004080 denotes Annexin A7
R310 T901 T900 _lexicallyChainedTo membranes,fusion of