PMC:1858683 / 29489-29959 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1858683","sourcedb":"PMC","sourceid":"1858683","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1858683","text":"Table 4 Validation of gene expression changes in the E18.5 Pygo1/Pygo2 null kidneys normalized to E18.5 wild-type kidneys.\nGene symbol Microarray fold change QPCR fold change (SD) Validation\nAldh1a7 - 2.2 1.1 (0.11) No\nCol8a1 2.1 2.9 (0.78) Yes\nCsrp1 - 7.1 1.2 (0.02) No\nKlk5 2.8 5.8 (0.74) Yes\nPygo2 - 3.9 - 3.7 (0.04) Yes\nPicalm 3.1 2.2 (0.24) Yes\nRen2 2.2 6.1 (0.36) Yes\nTia1 6.6 and 2.3 Amplification not detected in wild-type samples Yes","divisions":[{"label":"label","span":{"begin":0,"end":7}},{"label":"caption","span":{"begin":9,"end":123}},{"label":"p","span":{"begin":9,"end":123}},{"label":"tr","span":{"begin":124,"end":194}},{"label":"td","span":{"begin":124,"end":135}},{"label":"td","span":{"begin":137,"end":159}},{"label":"td","span":{"begin":161,"end":182}},{"label":"td","span":{"begin":184,"end":194}},{"label":"tr","span":{"begin":195,"end":225}},{"label":"td","span":{"begin":195,"end":202}},{"label":"td","span":{"begin":204,"end":209}},{"label":"td","span":{"begin":211,"end":221}},{"label":"td","span":{"begin":223,"end":225}},{"label":"tr","span":{"begin":226,"end":254}},{"label":"td","span":{"begin":226,"end":232}},{"label":"td","span":{"begin":234,"end":237}},{"label":"td","span":{"begin":239,"end":249}},{"label":"td","span":{"begin":251,"end":254}},{"label":"tr","span":{"begin":255,"end":283}},{"label":"td","span":{"begin":255,"end":260}},{"label":"td","span":{"begin":262,"end":267}},{"label":"td","span":{"begin":269,"end":279}},{"label":"td","span":{"begin":281,"end":283}},{"label":"tr","span":{"begin":284,"end":310}},{"label":"td","span":{"begin":284,"end":288}},{"label":"td","span":{"begin":290,"end":293}},{"label":"td","span":{"begin":295,"end":305}},{"label":"td","span":{"begin":307,"end":310}},{"label":"tr","span":{"begin":311,"end":342}},{"label":"td","span":{"begin":311,"end":316}},{"label":"td","span":{"begin":318,"end":323}},{"label":"td","span":{"begin":325,"end":337}},{"label":"td","span":{"begin":339,"end":342}},{"label":"tr","span":{"begin":343,"end":371}},{"label":"td","span":{"begin":343,"end":349}},{"label":"td","span":{"begin":351,"end":354}},{"label":"td","span":{"begin":356,"end":366}},{"label":"td","span":{"begin":368,"end":371}},{"label":"tr","span":{"begin":372,"end":398}},{"label":"td","span":{"begin":372,"end":376}},{"label":"td","span":{"begin":378,"end":381}},{"label":"td","span":{"begin":383,"end":393}},{"label":"td","span":{"begin":395,"end":398}},{"label":"td","span":{"begin":399,"end":403}},{"label":"td","span":{"begin":405,"end":416}},{"label":"td","span":{"begin":418,"end":465}}],"tracks":[{"project":"craft-sa-dev","denotations":[{"id":"T27661","span":{"begin":50,"end":53},"obj":"DT"},{"id":"T27660","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T27659","span":{"begin":39,"end":46},"obj":"NNS"},{"id":"T27658","span":{"begin":28,"end":38},"obj":"NN"},{"id":"T27657","span":{"begin":23,"end":27},"obj":"NN"},{"id":"T27656","span":{"begin":20,"end":22},"obj":"IN"},{"id":"T27655","span":{"begin":9,"end":19},"obj":"NN"},{"id":"T27675","span":{"begin":122,"end":123},"obj":"."},{"id":"T27674","span":{"begin":109,"end":110},"obj":"HYPH"},{"id":"T27673","span":{"begin":110,"end":114},"obj":"NN"},{"id":"T27672","span":{"begin":105,"end":109},"obj":"JJ"},{"id":"T27671","span":{"begin":115,"end":122},"obj":"NNS"},{"id":"T27670","span":{"begin":99,"end":104},"obj":"NN"},{"id":"T27669","span":{"begin":96,"end":98},"obj":"IN"},{"id":"T27668","span":{"begin":85,"end":95},"obj":"VBN"},{"id":"T27667","span":{"begin":72,"end":76},"obj":"JJ"},{"id":"T27666","span":{"begin":65,"end":66},"obj":"HYPH"},{"id":"T27665","span":{"begin":66,"end":71},"obj":"NN"},{"id":"T27664","span":{"begin":60,"end":65},"obj":"NN"},{"id":"T27663","span":{"begin":54,"end":59},"obj":"NN"},{"id":"T27662","span":{"begin":77,"end":84},"obj":"NNS"}],"relations":[{"id":"R8046","pred":"prep","subj":"T27656","obj":"T27655"},{"id":"R8047","pred":"compound","subj":"T27657","obj":"T27658"},{"id":"R8048","pred":"compound","subj":"T27658","obj":"T27659"},{"id":"R8049","pred":"pobj","subj":"T27659","obj":"T27656"},{"id":"R8050","pred":"prep","subj":"T27660","obj":"T27659"},{"id":"R8051","pred":"det","subj":"T27661","obj":"T27662"},{"id":"R8052","pred":"pobj","subj":"T27662","obj":"T27660"},{"id":"R8053","pred":"nmod","subj":"T27663","obj":"T27662"},{"id":"R8054","pred":"compound","subj":"T27664","obj":"T27665"},{"id":"R8055","pred":"npadvmod","subj":"T27665","obj":"T27667"},{"id":"R8056","pred":"punct","subj":"T27666","obj":"T27665"},{"id":"R8057","pred":"amod","subj":"T27667","obj":"T27662"},{"id":"R8058","pred":"acl","subj":"T27668","obj":"T27659"},{"id":"R8059","pred":"prep","subj":"T27669","obj":"T27668"},{"id":"R8060","pred":"nmod","subj":"T27670","obj":"T27671"},{"id":"R8061","pred":"pobj","subj":"T27671","obj":"T27669"},{"id":"R8062","pred":"amod","subj":"T27672","obj":"T27673"},{"id":"R8063","pred":"compound","subj":"T27673","obj":"T27671"},{"id":"R8064","pred":"punct","subj":"T27674","obj":"T27673"},{"id":"R8065","pred":"punct","subj":"T27675","obj":"T27655"}],"attributes":[{"subj":"T27661","pred":"source","obj":"craft-sa-dev"},{"subj":"T27660","pred":"source","obj":"craft-sa-dev"},{"subj":"T27659","pred":"source","obj":"craft-sa-dev"},{"subj":"T27658","pred":"source","obj":"craft-sa-dev"},{"subj":"T27657","pred":"source","obj":"craft-sa-dev"},{"subj":"T27656","pred":"source","obj":"craft-sa-dev"},{"subj":"T27655","pred":"source","obj":"craft-sa-dev"},{"subj":"T27675","pred":"source","obj":"craft-sa-dev"},{"subj":"T27674","pred":"source","obj":"craft-sa-dev"},{"subj":"T27673","pred":"source","obj":"craft-sa-dev"},{"subj":"T27672","pred":"source","obj":"craft-sa-dev"},{"subj":"T27671","pred":"source","obj":"craft-sa-dev"},{"subj":"T27670","pred":"source","obj":"craft-sa-dev"},{"subj":"T27669","pred":"source","obj":"craft-sa-dev"},{"subj":"T27668","pred":"source","obj":"craft-sa-dev"},{"subj":"T27667","pred":"source","obj":"craft-sa-dev"},{"subj":"T27666","pred":"source","obj":"craft-sa-dev"},{"subj":"T27665","pred":"source","obj":"craft-sa-dev"},{"subj":"T27664","pred":"source","obj":"craft-sa-dev"},{"subj":"T27663","pred":"source","obj":"craft-sa-dev"},{"subj":"T27662","pred":"source","obj":"craft-sa-dev"}]},{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T27654","span":{"begin":115,"end":122},"obj":"UBERON:0002113"},{"id":"T27653","span":{"begin":105,"end":114},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T27652","span":{"begin":77,"end":84},"obj":"UBERON:0002113"},{"id":"T27651","span":{"begin":72,"end":76},"obj":"SO_EXT:sequence_nullness"},{"id":"T27650","span":{"begin":66,"end":71},"obj":"PR_EXT:000013524"},{"id":"T27649","span":{"begin":60,"end":65},"obj":"PR_EXT:000013523"},{"id":"T27648","span":{"begin":23,"end":38},"obj":"GO:0010467"},{"id":"T27647","span":{"begin":23,"end":27},"obj":"SO_EXT:0000704"}],"attributes":[{"subj":"T27654","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T27653","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T27652","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T27651","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T27650","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T27649","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T27648","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T27647","pred":"source","obj":"craft-ca-core-ex-dev"}]},{"project":"craft-ca-core-dev","denotations":[{"id":"T27646","span":{"begin":115,"end":122},"obj":"UBERON:0002113"},{"id":"T27645","span":{"begin":77,"end":84},"obj":"UBERON:0002113"},{"id":"T27644","span":{"begin":66,"end":71},"obj":"PR:000013524"},{"id":"T27643","span":{"begin":60,"end":65},"obj":"PR:000013523"},{"id":"T27642","span":{"begin":23,"end":38},"obj":"GO:0010467"},{"id":"T27641","span":{"begin":23,"end":27},"obj":"SO:0000704"}],"attributes":[{"subj":"T27646","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T27645","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T27644","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T27643","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T27642","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T27641","pred":"source","obj":"craft-ca-core-dev"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"craft-sa-dev","color":"#93e8ec","default":true},{"id":"craft-ca-core-ex-dev","color":"#ecd693"},{"id":"craft-ca-core-dev","color":"#bc93ec"}]}]}}