PMC:1472690 / 10898-11679 JSONTXT

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    pmc-enju-pas

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    bionlp-st-ge-2016-test-proteins

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    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6067","span":{"begin":191,"end":195},"obj":"http://www.uniprot.org/uniprot/P05231"},{"id":"T6066","span":{"begin":74,"end":78},"obj":"http://www.uniprot.org/uniprot/P05231"},{"id":"T6051","span":{"begin":179,"end":183},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T6050","span":{"begin":62,"end":66},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T6027","span":{"begin":773,"end":779},"obj":"http://www.uniprot.org/uniprot/P06886"},{"id":"T6057","span":{"begin":185,"end":189},"obj":"http://www.uniprot.org/uniprot/P10145"},{"id":"T6056","span":{"begin":68,"end":72},"obj":"http://www.uniprot.org/uniprot/P10145"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    UBERON-AE

    {"project":"UBERON-AE","denotations":[{"id":"T4718","span":{"begin":338,"end":343},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T4756","span":{"begin":530,"end":543},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T4754","span":{"begin":319,"end":328},"obj":"http://purl.obolibrary.org/obo/GO_0046903"},{"id":"T4753","span":{"begin":310,"end":328},"obj":"http://purl.obolibrary.org/obo/GO_0050663"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T5013","span":{"begin":700,"end":714},"obj":"http://purl.obolibrary.org/obo/GO_0001872"},{"id":"T5012","span":{"begin":551,"end":558},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T5007","span":{"begin":191,"end":195},"obj":"http://purl.obolibrary.org/obo/GO_0005138"},{"id":"T5006","span":{"begin":74,"end":78},"obj":"http://purl.obolibrary.org/obo/GO_0005138"},{"id":"T4997","span":{"begin":185,"end":189},"obj":"http://purl.obolibrary.org/obo/GO_0005153"},{"id":"T4996","span":{"begin":68,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0005153"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T5022","span":{"begin":344,"end":349},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    sentences

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    simple1

    {"project":"simple1","denotations":[{"id":"T5108","span":{"begin":773,"end":779},"obj":"Protein"},{"id":"T5107","span":{"begin":197,"end":201},"obj":"Protein"},{"id":"T5106","span":{"begin":191,"end":195},"obj":"Protein"},{"id":"T5105","span":{"begin":185,"end":189},"obj":"Protein"},{"id":"T5104","span":{"begin":179,"end":183},"obj":"Protein"},{"id":"T5103","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T5102","span":{"begin":74,"end":78},"obj":"Protein"},{"id":"T5101","span":{"begin":68,"end":72},"obj":"Protein"},{"id":"T5100","span":{"begin":62,"end":66},"obj":"Protein"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T7649","span":{"begin":68,"end":72},"obj":"Protein"},{"id":"T7648","span":{"begin":62,"end":66},"obj":"Protein"},{"id":"T7647","span":{"begin":197,"end":201},"obj":"Protein"},{"id":"T7721","span":{"begin":165,"end":175},"obj":"Gene_expression"},{"id":"T7720","span":{"begin":157,"end":161},"obj":"Positive_regulation"},{"id":"T7655","span":{"begin":773,"end":779},"obj":"Protein"},{"id":"T7654","span":{"begin":191,"end":195},"obj":"Protein"},{"id":"T7653","span":{"begin":185,"end":189},"obj":"Protein"},{"id":"T7652","span":{"begin":179,"end":183},"obj":"Protein"},{"id":"T7651","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T7650","span":{"begin":74,"end":78},"obj":"Protein"}],"relations":[{"id":"R4985","pred":"themeOf","subj":"T7647","obj":"T7721"},{"id":"R4987","pred":"themeOf","subj":"T7652","obj":"T7721"},{"id":"R4988","pred":"themeOf","subj":"T7653","obj":"T7721"},{"id":"R4989","pred":"themeOf","subj":"T7654","obj":"T7721"},{"id":"R5014","pred":"themeOf","subj":"T7721","obj":"T7720"},{"id":"R5015","pred":"themeOf","subj":"T7721","obj":"T7720"},{"id":"R5016","pred":"themeOf","subj":"T7721","obj":"T7720"},{"id":"R5017","pred":"themeOf","subj":"T7721","obj":"T7720"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T6105","span":{"begin":773,"end":779},"obj":"Protein"},{"id":"T6104","span":{"begin":191,"end":195},"obj":"Protein"},{"id":"T6103","span":{"begin":185,"end":189},"obj":"Protein"},{"id":"T6102","span":{"begin":179,"end":183},"obj":"Protein"},{"id":"T6101","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T6100","span":{"begin":74,"end":78},"obj":"Protein"},{"id":"T6099","span":{"begin":68,"end":72},"obj":"Protein"},{"id":"T6098","span":{"begin":62,"end":66},"obj":"Protein"},{"id":"T6097","span":{"begin":197,"end":201},"obj":"Protein"},{"id":"T6171","span":{"begin":165,"end":175},"obj":"Gene_expression"},{"id":"T6170","span":{"begin":157,"end":161},"obj":"Positive_regulation"}],"relations":[{"id":"R3806","pred":"themeOf","subj":"T6097","obj":"T6171"},{"id":"R3807","pred":"themeOf","subj":"T6102","obj":"T6171"},{"id":"R3808","pred":"themeOf","subj":"T6103","obj":"T6171"},{"id":"R3809","pred":"themeOf","subj":"T6104","obj":"T6171"},{"id":"R3831","pred":"themeOf","subj":"T6171","obj":"T6170"},{"id":"R3833","pred":"themeOf","subj":"T6171","obj":"T6170"},{"id":"R3835","pred":"themeOf","subj":"T6171","obj":"T6170"},{"id":"R3837","pred":"themeOf","subj":"T6171","obj":"T6170"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T6380","span":{"begin":157,"end":161},"obj":"Positive_regulation"},{"id":"T6379","span":{"begin":165,"end":175},"obj":"Gene_expression"},{"id":"T6314","span":{"begin":773,"end":779},"obj":"Protein"},{"id":"T6313","span":{"begin":191,"end":195},"obj":"Protein"},{"id":"T6312","span":{"begin":185,"end":189},"obj":"Protein"},{"id":"T6311","span":{"begin":179,"end":183},"obj":"Protein"},{"id":"T6310","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T6309","span":{"begin":74,"end":78},"obj":"Protein"},{"id":"T6308","span":{"begin":68,"end":72},"obj":"Protein"},{"id":"T6307","span":{"begin":62,"end":66},"obj":"Protein"},{"id":"T6306","span":{"begin":197,"end":201},"obj":"Protein"}],"relations":[{"id":"R3921","pred":"themeOf","subj":"T6306","obj":"T6379"},{"id":"R3923","pred":"themeOf","subj":"T6311","obj":"T6379"},{"id":"R3925","pred":"themeOf","subj":"T6312","obj":"T6379"},{"id":"R3926","pred":"themeOf","subj":"T6313","obj":"T6379"},{"id":"R3957","pred":"themeOf","subj":"T6379","obj":"T6380"},{"id":"R3959","pred":"themeOf","subj":"T6379","obj":"T6380"},{"id":"R3960","pred":"themeOf","subj":"T6379","obj":"T6380"},{"id":"R3961","pred":"themeOf","subj":"T6379","obj":"T6380"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T7612","span":{"begin":515,"end":564},"obj":"Entity"},{"id":"T7609","span":{"begin":185,"end":189},"obj":"Protein"},{"id":"T7605","span":{"begin":197,"end":201},"obj":"Protein"},{"id":"T7604","span":{"begin":58,"end":97},"obj":"Entity"},{"id":"T7587","span":{"begin":146,"end":150},"obj":"Entity"},{"id":"T7581","span":{"begin":768,"end":772},"obj":"Entity"},{"id":"T7568","span":{"begin":191,"end":195},"obj":"Protein"},{"id":"T7567","span":{"begin":41,"end":97},"obj":"Entity"},{"id":"T7566","span":{"begin":602,"end":652},"obj":"Protein"},{"id":"T7555","span":{"begin":62,"end":66},"obj":"Protein"},{"id":"T7552","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T7543","span":{"begin":471,"end":564},"obj":"Protein"},{"id":"T7531","span":{"begin":68,"end":72},"obj":"Protein"},{"id":"T7530","span":{"begin":636,"end":652},"obj":"Entity"},{"id":"T7507","span":{"begin":505,"end":509},"obj":"Entity"},{"id":"T7637","span":{"begin":329,"end":357},"obj":"Entity"},{"id":"T7635","span":{"begin":179,"end":183},"obj":"Protein"},{"id":"T7626","span":{"begin":768,"end":779},"obj":"Protein"},{"id":"T7623","span":{"begin":310,"end":318},"obj":"Protein"},{"id":"T7786","span":{"begin":295,"end":357},"obj":"Negative_regulation"},{"id":"T7778","span":{"begin":74,"end":78},"obj":"Protein"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}

    bionlp-st-ge-2016-spacy-parsed

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    test3

    {"project":"test3","denotations":[{"id":"T4615","span":{"begin":773,"end":779},"obj":"Protein"},{"id":"T4614","span":{"begin":197,"end":201},"obj":"Protein"},{"id":"T4613","span":{"begin":191,"end":195},"obj":"Protein"},{"id":"T4612","span":{"begin":185,"end":189},"obj":"Protein"},{"id":"T4611","span":{"begin":179,"end":183},"obj":"Protein"},{"id":"T4610","span":{"begin":165,"end":175},"obj":"Gene_expression"},{"id":"T4609","span":{"begin":157,"end":161},"obj":"Positive_regulation"},{"id":"T4608","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T4607","span":{"begin":74,"end":78},"obj":"Protein"},{"id":"T4606","span":{"begin":68,"end":72},"obj":"Protein"},{"id":"T4605","span":{"begin":62,"end":66},"obj":"Protein"},{"id":"T4539","span":{"begin":773,"end":779},"obj":"Protein"},{"id":"T4538","span":{"begin":197,"end":201},"obj":"Protein"},{"id":"T4537","span":{"begin":191,"end":195},"obj":"Protein"},{"id":"T4536","span":{"begin":185,"end":189},"obj":"Protein"},{"id":"T4535","span":{"begin":179,"end":183},"obj":"Protein"},{"id":"T4534","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T4533","span":{"begin":74,"end":78},"obj":"Protein"},{"id":"T4532","span":{"begin":68,"end":72},"obj":"Protein"},{"id":"T4531","span":{"begin":62,"end":66},"obj":"Protein"}],"relations":[{"id":"R2792","pred":"themeOf","subj":"T4610","obj":"T4609"},{"id":"R2793","pred":"themeOf","subj":"T4611","obj":"T4610"},{"id":"R2794","pred":"themeOf","subj":"T4612","obj":"T4610"},{"id":"R2795","pred":"themeOf","subj":"T4613","obj":"T4610"},{"id":"R2796","pred":"themeOf","subj":"T4614","obj":"T4610"}],"text":"Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators. Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18]. Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):"}