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PMC:1472690 / 10898-11679 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5332 780-781 -COLON- denotes :
T5331 779-780 -RRB- denotes )
T5330 773-779 NN denotes TSST-1
T5329 771-772 -COMMA- denotes ,
T5328 768-771 NN denotes LPS
T5327 767-768 -LRB- denotes (
T5326 757-766 NN denotes mediators
T5325 740-756 JJ denotes pro-inflammatory
T5324 736-739 CD denotes two
T5323 733-735 TO denotes to
T5322 722-732 NN denotes comparison
T5321 719-721 IN denotes in
T5320 715-718 CC denotes and
T5319 700-714 NN denotes β-1→3-D-glucan
T5318 692-699 JJ denotes soluble
T5317 686-691 NN denotes water
T5316 677-685 VB denotes purified
T5315 670-676 RB denotes highly
T5314 668-669 DT denotes a
T5313 665-667 TO denotes to
T5312 656-664 NN denotes response
T5311 653-655 IN denotes in
T5310 642-652 NN denotes leukocytes
T5309 636-641 JJ denotes human
T5308 633-635 IN denotes of
T5307 625-632 NN denotes profile
T5306 616-624 NN denotes cytokine
T5305 606-615 VB denotes following
T5304 602-605 DT denotes the
T5303 593-601 VB denotes revealed
T5302 584-592 NN denotes analysis
T5301 570-583 JJ denotes comprehensive
T5300 566-569 PRP-DOLLAR- denotes our
T5299 564-565 -COMMA- denotes ,
T5298 559-564 NN denotes sites
T5297 551-558 NN denotes binding
T5296 544-550 NN denotes factor
T5295 530-543 NN denotes transcription
T5294 519-529 JJ denotes additional
T5293 515-518 CD denotes six
T5292 511-514 CC denotes and
T5291 509-510 -RRB- denotes )
T5290 508-509 NN denotes h
T5289 505-507 CD denotes 48
T5288 504-505 -LRB- denotes (
T5287 499-503 NN denotes time
T5286 494-498 IN denotes over
T5285 484-493 NN denotes cytokines
T5284 471-483 JJ denotes inflammatory
T5283 469-470 -RRB- denotes )
T5282 464-469 CD denotes three
T5281 463-464 -LRB- denotes (
T5280 457-462 JJ denotes anti-
T5279 454-456 IN denotes as
T5278 449-453 RB denotes well
T5277 446-448 RB denotes as
T5276 444-445 -RRB- denotes )
T5275 439-444 CD denotes eight
T5274 438-439 -LRB- denotes (
T5273 433-437 JJ denotes pro-
T5272 423-432 VB denotes examining
T5271 420-422 IN denotes of
T5270 414-419 NN denotes terms
T5269 411-413 IN denotes in
T5268 402-410 NN denotes findings
T5267 393-401 JJ denotes singular
T5266 387-392 DT denotes these
T5265 377-386 VB denotes extending
T5264 373-376 CC denotes and
T5263 359-372 VB denotes Corroborating
T5262 356-357 -RRB- denotes ]
T5261 351-356 CD denotes 15-18
T5260 350-351 -LRB- denotes [
T5259 344-349 NN denotes cells
T5258 338-343 NN denotes blood
T5257 332-337 JJ denotes human
T5256 329-331 IN denotes of
T5255 319-328 NN denotes secretion
T5254 310-318 NN denotes cytokine
T5253 302-309 JJ denotes limited
T5252 300-301 DT denotes a
T5251 295-299 RB denotes only
T5250 287-294 VB denotes induced
T5249 271-286 NN denotes β-1→3-D-glucans
T5248 266-270 IN denotes that
T5247 257-265 VB denotes reported
T5246 249-256 NN denotes studies
T5245 240-248 JJ denotes Previous
T5244 229-238 NN denotes mediators
T5243 212-228 JJ denotes pro-inflammatory
T5242 206-211 JJ denotes other
T5241 202-205 CC denotes and
T5240 197-201 NN denotes IFNγ
T5239 195-196 -COMMA- denotes ,
T5238 191-195 NN denotes IL-6
T5237 189-190 -COMMA- denotes ,
T5236 185-189 NN denotes IL-8
T5235 183-184 -COMMA- denotes ,
T5234 179-183 NN denotes TNFα
T5233 176-178 IN denotes of
T5232 165-175 NN denotes production
T5231 162-164 TO denotes to
T5230 157-161 VB denotes lead
T5229 151-156 MD denotes would
T5228 146-150 NN denotes PBMC
T5227 140-145 JJ denotes human
T5226 137-139 IN denotes of
T5225 127-136 NN denotes treatment
T5224 124-126 NN denotes GP
T5223 119-123 IN denotes that
T5222 111-118 VB denotes assumed
T5221 108-110 VB denotes be
T5220 102-107 MD denotes could
T5219 99-101 PRP denotes it
T5218 97-98 -COMMA- denotes ,
T5217 88-97 NN denotes promoters
T5216 83-87 NN denotes IFNγ
T5215 79-82 CC denotes and
T5214 74-78 NN denotes IL-6
T5213 72-73 -COMMA- denotes ,
T5212 68-72 NN denotes IL-8
T5211 66-67 -COMMA- denotes ,
T5210 62-66 NN denotes TNFα
T5209 58-61 DT denotes the
T5208 53-57 IN denotes from
T5207 47-52 NN denotes sites
T5206 41-46 CD denotes seven
T5205 38-40 TO denotes to
T5204 31-37 NN denotes shifts
T5203 26-30 NN denotes band
T5202 15-25 JJ denotes GP-induced
T5201 11-14 DT denotes the
T5200 8-10 IN denotes of
T5199 0-7 IN denotes Because
R2980 T5199 T5200 arg1Of Because,of
R2981 T5204 T5199 arg2Of shifts,Because
R2982 T5204 T5201 arg1Of shifts,the
R2983 T5204 T5202 arg1Of shifts,GP-induced
R2984 T5204 T5203 arg1Of shifts,band
R2985 T5204 T5205 arg1Of shifts,to
R2986 T5207 T5205 arg2Of sites,to
R2987 T5207 T5206 arg1Of sites,seven
R2988 T5207 T5208 arg1Of sites,from
R2989 T5210 T5211 arg1Of TNFα,","
R2990 T5211 T5213 arg1Of ",",","
R2991 T5212 T5211 arg2Of IL-8,","
R2992 T5213 T5215 arg1Of ",",and
R2993 T5214 T5213 arg2Of IL-6,","
R2994 T5216 T5215 arg2Of IFNγ,and
R2995 T5217 T5208 arg2Of promoters,from
R2996 T5217 T5209 arg1Of promoters,the
R2997 T5217 T5210 arg1Of promoters,TNFα
R2998 T5217 T5212 arg1Of promoters,IL-8
R2999 T5217 T5214 arg1Of promoters,IL-6
R3000 T5217 T5216 arg1Of promoters,IFNγ
R3001 T5219 T5220 arg1Of it,could
R3002 T5219 T5221 arg1Of it,be
R3003 T5219 T5222 arg2Of it,assumed
R3004 T5222 T5199 arg1Of assumed,Because
R3005 T5222 T5218 arg1Of assumed,","
R3006 T5222 T5220 arg2Of assumed,could
R3007 T5222 T5221 arg2Of assumed,be
R3008 T5225 T5224 arg1Of treatment,GP
R3009 T5225 T5226 arg1Of treatment,of
R3010 T5225 T5229 arg1Of treatment,would
R3011 T5225 T5230 arg1Of treatment,lead
R3012 T5228 T5226 arg2Of PBMC,of
R3013 T5228 T5227 arg1Of PBMC,human
R3014 T5230 T5222 arg3Of lead,assumed
R3015 T5230 T5223 arg1Of lead,that
R3016 T5230 T5229 arg2Of lead,would
R3017 T5230 T5231 arg1Of lead,to
R3018 T5232 T5231 arg2Of production,to
R3019 T5232 T5233 arg1Of production,of
R3020 T5234 T5235 arg1Of TNFα,","
R3021 T5235 T5237 arg1Of ",",","
R3022 T5236 T5235 arg2Of IL-8,","
R3023 T5237 T5239 arg1Of ",",","
R3024 T5238 T5237 arg2Of IL-6,","
R3025 T5239 T5241 arg1Of ",",and
R3026 T5240 T5239 arg2Of IFNγ,","
R3027 T5241 T5233 arg2Of and,of
R3028 T5244 T5241 arg2Of mediators,and
R3029 T5244 T5242 arg1Of mediators,other
R3030 T5244 T5243 arg1Of mediators,pro-inflammatory
R3031 T5246 T5245 arg1Of studies,Previous
R3032 T5246 T5247 arg1Of studies,reported
R3033 T5249 T5250 arg1Of β-1→3-D-glucans,induced
R3034 T5250 T5247 arg2Of induced,reported
R3035 T5250 T5248 arg1Of induced,that
R3036 T5255 T5250 arg2Of secretion,induced
R3037 T5255 T5251 arg1Of secretion,only
R3038 T5255 T5252 arg1Of secretion,a
R3039 T5255 T5253 arg1Of secretion,limited
R3040 T5255 T5254 arg1Of secretion,cytokine
R3041 T5255 T5256 arg1Of secretion,of
R3042 T5255 T5260 arg1Of secretion,[
R3043 T5259 T5256 arg2Of cells,of
R3044 T5259 T5257 arg1Of cells,human
R3045 T5259 T5258 arg1Of cells,blood
R3046 T5261 T5260 arg2Of 15-18,[
R3047 T5262 T5260 arg3Of ],[
R3048 T5263 T5264 arg1Of Corroborating,and
R3049 T5265 T5264 arg2Of extending,and
R3050 T5268 T5263 arg2Of findings,Corroborating
R3051 T5268 T5265 arg2Of findings,extending
R3052 T5268 T5266 arg1Of findings,these
R3053 T5268 T5267 arg1Of findings,singular
R3054 T5268 T5269 arg1Of findings,in
R3055 T5270 T5269 arg2Of terms,in
R3056 T5270 T5271 arg1Of terms,of
R3057 T5272 T5271 arg2Of examining,of
R3058 T5272 T5286 arg1Of examining,over
R3059 T5273 T5274 arg1Of pro-,(
R3060 T5273 T5279 arg1Of pro-,as
R3061 T5275 T5274 arg2Of eight,(
R3062 T5276 T5274 arg3Of ),(
R3063 T5279 T5272 arg2Of as,examining
R3064 T5279 T5277 arg1Of as,as
R3065 T5279 T5278 arg1Of as,well
R3066 T5280 T5281 arg1Of anti-,(
R3067 T5282 T5281 arg2Of three,(
R3068 T5283 T5281 arg3Of ),(
R3069 T5285 T5279 arg2Of cytokines,as
R3070 T5285 T5280 arg1Of cytokines,anti-
R3071 T5285 T5284 arg1Of cytokines,inflammatory
R3072 T5287 T5288 arg1Of time,(
R3073 T5287 T5292 arg1Of time,and
R3074 T5290 T5288 arg2Of h,(
R3075 T5290 T5289 arg1Of h,48
R3076 T5291 T5288 arg3Of ),(
R3077 T5292 T5286 arg2Of and,over
R3078 T5298 T5292 arg2Of sites,and
R3079 T5298 T5293 arg1Of sites,six
R3080 T5298 T5294 arg1Of sites,additional
R3081 T5298 T5295 arg1Of sites,transcription
R3082 T5298 T5296 arg1Of sites,factor
R3083 T5298 T5297 arg1Of sites,binding
R3084 T5302 T5265 arg1Of analysis,extending
R3085 T5302 T5300 arg1Of analysis,our
R3086 T5302 T5301 arg1Of analysis,comprehensive
R3087 T5302 T5303 arg1Of analysis,revealed
R3088 T5303 T5263 modOf revealed,Corroborating
R3089 T5303 T5265 modOf revealed,extending
R3090 T5303 T5299 arg1Of revealed,","
R3091 T5303 T5311 arg1Of revealed,in
R3092 T5303 T5321 arg1Of revealed,in
R3093 T5307 T5303 arg2Of profile,revealed
R3094 T5307 T5304 arg1Of profile,the
R3095 T5307 T5305 arg1Of profile,following
R3096 T5307 T5306 arg1Of profile,cytokine
R3097 T5307 T5308 arg1Of profile,of
R3098 T5310 T5308 arg2Of leukocytes,of
R3099 T5310 T5309 arg1Of leukocytes,human
R3100 T5311 T5313 arg1Of in,to
R3101 T5311 T5320 arg1Of in,and
R3102 T5312 T5311 arg2Of response,in
R3103 T5316 T5315 arg1Of purified,highly
R3104 T5319 T5311 arg3Of β-1→3-D-glucan,in
R3105 T5319 T5314 arg1Of β-1→3-D-glucan,a
R3106 T5319 T5316 arg1Of β-1→3-D-glucan,purified
R3107 T5319 T5317 arg1Of β-1→3-D-glucan,water
R3108 T5319 T5318 arg1Of β-1→3-D-glucan,soluble
R3109 T5321 T5320 arg2Of in,and
R3110 T5322 T5321 arg2Of comparison,in
R3111 T5322 T5323 arg1Of comparison,to
R3112 T5326 T5323 arg2Of mediators,to
R3113 T5326 T5324 arg1Of mediators,two
R3114 T5326 T5325 arg1Of mediators,pro-inflammatory
R3115 T5326 T5327 arg1Of mediators,(
R3116 T5326 T5332 arg1Of mediators,:
R3117 T5328 T5327 arg2Of LPS,(
R3118 T5328 T5329 arg1Of LPS,","
R3119 T5330 T5329 arg2Of TSST-1,","
R3120 T5331 T5327 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4931 773-779 Protein denotes TSST-1
T4930 197-201 Protein denotes IFNγ
T4929 191-195 Protein denotes IL-6
T4928 185-189 Protein denotes IL-8
T4927 179-183 Protein denotes TNFα
T4926 83-87 Protein denotes IFNγ
T4925 74-78 Protein denotes IL-6
T4924 68-72 Protein denotes IL-8
T4923 62-66 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6067 191-195 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T6066 74-78 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T6051 179-183 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T6050 62-66 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T6027 773-779 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T6057 185-189 http://www.uniprot.org/uniprot/P10145 denotes IL-8
T6056 68-72 http://www.uniprot.org/uniprot/P10145 denotes IL-8

UBERON-AE

Id Subject Object Predicate Lexical cue
T4718 338-343 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

GO-BP

Id Subject Object Predicate Lexical cue
T4756 530-543 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T4754 319-328 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion
T4753 310-328 http://purl.obolibrary.org/obo/GO_0050663 denotes cytokine secretion

GO-MF

Id Subject Object Predicate Lexical cue
T5013 700-714 http://purl.obolibrary.org/obo/GO_0001872 denotes β-1→3-D-glucan
T5012 551-558 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T5007 191-195 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T5006 74-78 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T4997 185-189 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8
T4996 68-72 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8

GO-CC

Id Subject Object Predicate Lexical cue
T5022 344-349 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T4722 359-781 Sentence denotes Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):
T4721 240-358 Sentence denotes Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18].
T4720 0-239 Sentence denotes Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators.
T83 0-239 Sentence denotes Because of the GP-induced band shifts to seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters, it could be assumed that GP treatment of human PBMC would lead to production of TNFα, IL-8, IL-6, IFNγ and other pro-inflammatory mediators.
T84 240-358 Sentence denotes Previous studies reported that β-1→3-D-glucans induced only a limited cytokine secretion of human blood cells [15-18].
T85 359-781 Sentence denotes Corroborating and extending these singular findings in terms of examining pro- (eight) as well as anti- (three) inflammatory cytokines over time (48 h) and six additional transcription factor binding sites, our comprehensive analysis revealed the following cytokine profile of human leukocytes in response to a highly purified water soluble β-1→3-D-glucan and in comparison to two pro-inflammatory mediators (LPS, TSST-1):

simple1

Id Subject Object Predicate Lexical cue
T5108 773-779 Protein denotes TSST-1
T5107 197-201 Protein denotes IFNγ
T5106 191-195 Protein denotes IL-6
T5105 185-189 Protein denotes IL-8
T5104 179-183 Protein denotes TNFα
T5103 83-87 Protein denotes IFNγ
T5102 74-78 Protein denotes IL-6
T5101 68-72 Protein denotes IL-8
T5100 62-66 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7721 165-175 Gene_expression denotes production
T7720 157-161 Positive_regulation denotes lead
T7655 773-779 Protein denotes TSST-1
T7654 191-195 Protein denotes IL-6
T7653 185-189 Protein denotes IL-8
T7652 179-183 Protein denotes TNFα
T7651 83-87 Protein denotes IFNγ
T7650 74-78 Protein denotes IL-6
T7649 68-72 Protein denotes IL-8
T7648 62-66 Protein denotes TNFα
T7647 197-201 Protein denotes IFNγ
R4985 T7647 T7721 themeOf IFNγ,production
R4987 T7652 T7721 themeOf TNFα,production
R4988 T7653 T7721 themeOf IL-8,production
R4989 T7654 T7721 themeOf IL-6,production
R5014 T7721 T7720 themeOf production,lead
R5015 T7721 T7720 themeOf production,lead
R5016 T7721 T7720 themeOf production,lead
R5017 T7721 T7720 themeOf production,lead

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6105 773-779 Protein denotes TSST-1
T6104 191-195 Protein denotes IL-6
T6103 185-189 Protein denotes IL-8
T6102 179-183 Protein denotes TNFα
T6101 83-87 Protein denotes IFNγ
T6100 74-78 Protein denotes IL-6
T6099 68-72 Protein denotes IL-8
T6098 62-66 Protein denotes TNFα
T6097 197-201 Protein denotes IFNγ
T6171 165-175 Gene_expression denotes production
T6170 157-161 Positive_regulation denotes lead
R3806 T6097 T6171 themeOf IFNγ,production
R3807 T6102 T6171 themeOf TNFα,production
R3808 T6103 T6171 themeOf IL-8,production
R3809 T6104 T6171 themeOf IL-6,production
R3831 T6171 T6170 themeOf production,lead
R3833 T6171 T6170 themeOf production,lead
R3835 T6171 T6170 themeOf production,lead
R3837 T6171 T6170 themeOf production,lead

DLUT931

Id Subject Object Predicate Lexical cue
T6380 157-161 Positive_regulation denotes lead
T6379 165-175 Gene_expression denotes production
T6314 773-779 Protein denotes TSST-1
T6313 191-195 Protein denotes IL-6
T6312 185-189 Protein denotes IL-8
T6311 179-183 Protein denotes TNFα
T6310 83-87 Protein denotes IFNγ
T6309 74-78 Protein denotes IL-6
T6308 68-72 Protein denotes IL-8
T6307 62-66 Protein denotes TNFα
T6306 197-201 Protein denotes IFNγ
R3921 T6306 T6379 themeOf IFNγ,production
R3923 T6311 T6379 themeOf TNFα,production
R3925 T6312 T6379 themeOf IL-8,production
R3926 T6313 T6379 themeOf IL-6,production
R3957 T6379 T6380 themeOf production,lead
R3959 T6379 T6380 themeOf production,lead
R3960 T6379 T6380 themeOf production,lead
R3961 T6379 T6380 themeOf production,lead

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7612 515-564 Entity denotes six additional transcription factor binding sites
T7609 185-189 Protein denotes IL-8
T7605 197-201 Protein denotes IFNγ
T7604 58-97 Entity denotes the TNFα, IL-8, IL-6 and IFNγ promoters
T7587 146-150 Entity denotes PBMC
T7581 768-772 Entity denotes LPS,
T7568 191-195 Protein denotes IL-6
T7567 41-97 Entity denotes seven sites from the TNFα, IL-8, IL-6 and IFNγ promoters
T7566 602-652 Protein denotes the following cytokine profile of human leukocytes
T7555 62-66 Protein denotes TNFα
T7552 83-87 Protein denotes IFNγ
T7543 471-564 Protein denotes inflammatory cytokines over time (48 h) and six additional transcription factor binding sites
T7531 68-72 Protein denotes IL-8
T7530 636-652 Entity denotes human leukocytes
T7507 505-509 Entity denotes 48 h
T7637 329-357 Entity denotes of human blood cells [15-18]
T7635 179-183 Protein denotes TNFα
T7626 768-779 Protein denotes LPS, TSST-1
T7623 310-318 Protein denotes cytokine
T7786 295-357 Negative_regulation denotes only a limited cytokine secretion of human blood cells [15-18]
T7778 74-78 Protein denotes IL-6

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6645 511-514 CC denotes and
T6644 509-510 -RRB- denotes )
T6643 508-509 NN denotes h
T6642 505-507 CD denotes 48
T6641 504-505 -LRB- denotes (
T6640 499-503 NN denotes time
T6639 494-498 IN denotes over
T6638 484-493 NNS denotes cytokines
T6637 471-483 JJ denotes inflammatory
T6636 469-470 -RRB- denotes )
T6635 464-469 CD denotes three
T6634 463-464 -LRB- denotes (
T6633 457-462 JJ denotes anti-
T6632 454-456 IN denotes as
T6631 449-453 RB denotes well
T6630 446-448 RB denotes as
T6629 444-445 -RRB- denotes )
T6628 439-444 CD denotes eight
T6627 438-439 -LRB- denotes (
T6626 433-437 JJ denotes pro-
T6625 423-432 VBG denotes examining
T6624 420-422 IN denotes of
T6623 414-419 NNS denotes terms
T6622 411-413 IN denotes in
T6621 402-410 NNS denotes findings
T6620 393-401 JJ denotes singular
T6619 387-392 DT denotes these
T6618 377-386 VBG denotes extending
T6617 373-376 CC denotes and
T6616 359-372 VBG denotes Corroborating
T6615 357-358 . denotes .
T6614 356-357 NNP denotes ]
T6613 351-356 CD denotes 15-18
T6612 350-351 NNP denotes [
T6611 344-349 NNS denotes cells
T6610 338-343 NN denotes blood
T6609 332-337 JJ denotes human
T6608 329-331 IN denotes of
T6607 319-328 NN denotes secretion
T6606 310-318 NN denotes cytokine
T6605 302-309 JJ denotes limited
T6604 300-301 DT denotes a
T6603 295-299 RB denotes only
T6602 287-294 VBD denotes induced
T6601 275-286 NNS denotes 3-D-glucans
T6600 274-275 NN denotes →
T6599 271-274 JJ denotes β-1
T6598 266-270 IN denotes that
T6597 257-265 VBD denotes reported
T6596 249-256 NNS denotes studies
T6595 240-248 JJ denotes Previous
T6594 238-239 . denotes .
T6593 229-238 NNS denotes mediators
T6592 212-228 JJ denotes pro-inflammatory
T6591 206-211 JJ denotes other
T6590 202-205 CC denotes and
T6589 197-201 NNP denotes IFNγ
T6588 195-196 , denotes ,
T6587 191-195 NNP denotes IL-6
T6586 189-190 , denotes ,
T6585 185-189 NNP denotes IL-8
T6584 183-184 , denotes ,
T6583 179-183 NNP denotes TNFα
T6582 176-178 IN denotes of
T6581 165-175 NN denotes production
T6580 162-164 TO denotes to
T6579 157-161 VB denotes lead
T6578 151-156 MD denotes would
T6577 146-150 NNP denotes PBMC
T6576 140-145 JJ denotes human
T6575 137-139 IN denotes of
T6574 127-136 NN denotes treatment
T6573 124-126 NNP denotes GP
T6572 119-123 IN denotes that
T6571 111-118 VBN denotes assumed
T6570 108-110 VB denotes be
T6569 102-107 MD denotes could
T6568 99-101 PRP denotes it
T6567 97-98 , denotes ,
T6566 88-97 NNS denotes promoters
T6565 83-87 NNP denotes IFNγ
T6564 79-82 CC denotes and
T6563 74-78 NNP denotes IL-6
T6562 72-73 , denotes ,
T6561 68-72 NNP denotes IL-8
T6560 66-67 , denotes ,
T6559 62-66 NNP denotes TNFα
T6558 58-61 DT denotes the
T6557 53-57 IN denotes from
T6556 47-52 NNS denotes sites
T6555 41-46 CD denotes seven
T6554 38-40 TO denotes to
T6553 31-37 NNS denotes shifts
T6552 26-30 NN denotes band
T6551 15-25 JJ denotes GP-induced
T6550 11-14 DT denotes the
T6549 8-10 IN denotes of
T6548 0-7 IN denotes Because
T6687 780-781 : denotes :
T6686 779-780 -RRB- denotes )
T6685 773-779 NNP denotes TSST-1
T6684 771-772 , denotes ,
T6683 768-771 NNP denotes LPS
T6682 767-768 -LRB- denotes (
T6681 757-766 NNS denotes mediators
T6680 740-756 JJ denotes pro-inflammatory
T6679 736-739 CD denotes two
T6678 733-735 TO denotes to
T6677 722-732 NN denotes comparison
T6676 719-721 IN denotes in
T6675 715-718 CC denotes and
T6674 704-714 NN denotes 3-D-glucan
T6673 703-704 NN denotes →
T6672 700-703 JJ denotes β-1
T6671 692-699 JJ denotes soluble
T6670 686-691 NN denotes water
T6669 677-685 VBN denotes purified
T6668 670-676 RB denotes highly
T6667 668-669 DT denotes a
T6666 665-667 TO denotes to
T6665 656-664 NN denotes response
T6664 653-655 IN denotes in
T6663 642-652 NNS denotes leukocytes
T6662 636-641 JJ denotes human
T6661 633-635 IN denotes of
T6660 625-632 NN denotes profile
T6659 616-624 NN denotes cytokine
T6658 606-615 JJ denotes following
T6657 602-605 DT denotes the
T6656 593-601 VBD denotes revealed
T6655 584-592 NN denotes analysis
T6654 570-583 JJ denotes comprehensive
T6653 566-569 PRP$ denotes our
T6652 564-565 , denotes ,
T6651 559-564 NNS denotes sites
T6650 551-558 JJ denotes binding
T6649 544-550 NN denotes factor
T6648 530-543 NN denotes transcription
T6647 519-529 JJ denotes additional
T6646 515-518 CD denotes six
R4050 T6548 T6571 prep Because,assumed
R4052 T6549 T6548 pcomp of,Because
R4053 T6550 T6553 det the,shifts
R4054 T6551 T6553 amod GP-induced,shifts
R4056 T6552 T6553 compound band,shifts
R4057 T6553 T6548 pobj shifts,Because
R4058 T6554 T6553 prep to,shifts
R4060 T6555 T6556 nummod seven,sites
R4061 T6556 T6554 pobj sites,to
R4062 T6557 T6556 prep from,sites
R4064 T6558 T6559 det the,TNFα
R4065 T6559 T6557 pobj TNFα,from
R4066 T6560 T6559 punct ",",TNFα
R4068 T6561 T6559 conj IL-8,TNFα
R4069 T6562 T6561 punct ",",IL-8
R4070 T6563 T6561 conj IL-6,IL-8
R4071 T6564 T6563 cc and,IL-6
R4073 T6565 T6563 conj IFNγ,IL-6
R4074 T6566 T6557 pobj promoters,from
R4075 T6567 T6571 punct ",",assumed
R4077 T6568 T6571 nsubjpass it,assumed
R4078 T6569 T6571 aux could,assumed
R4079 T6570 T6571 auxpass be,assumed
R4081 T6571 T6571 ROOT assumed,assumed
R4082 T6572 T6579 mark that,lead
R4083 T6573 T6574 compound GP,treatment
R4084 T6574 T6579 nsubj treatment,lead
R4085 T6637 T6638 amod inflammatory,cytokines
R4086 T6575 T6574 prep of,treatment
R4087 T6576 T6577 compound human,PBMC
R4088 T6577 T6575 pobj PBMC,of
R4089 T6578 T6579 aux would,lead
R4090 T6579 T6571 ccomp lead,assumed
R4091 T6580 T6579 prep to,lead
R4092 T6581 T6580 pobj production,to
R4093 T6582 T6581 prep of,production
R4094 T6638 T6625 dobj cytokines,examining
R4095 T6583 T6582 pobj TNFα,of
R4096 T6584 T6583 punct ",",TNFα
R4097 T6585 T6583 conj IL-8,TNFα
R4098 T6586 T6585 punct ",",IL-8
R4099 T6639 T6625 prep over,examining
R4100 T6587 T6585 conj IL-6,IL-8
R4101 T6588 T6587 punct ",",IL-6
R4102 T6589 T6587 conj IFNγ,IL-6
R4103 T6640 T6639 pobj time,over
R4104 T6590 T6589 cc and,IFNγ
R4105 T6591 T6593 amod other,mediators
R4106 T6592 T6593 amod pro-inflammatory,mediators
R4107 T6593 T6589 conj mediators,IFNγ
R4108 T6641 T6643 punct (,h
R4109 T6594 T6571 punct .,assumed
R4110 T6595 T6596 amod Previous,studies
R4111 T6642 T6643 nummod 48,h
R4112 T6596 T6597 nsubj studies,reported
R4113 T6597 T6597 ROOT reported,reported
R4114 T6598 T6602 mark that,induced
R4115 T6599 T6601 amod β-1,3-D-glucans
R4116 T6643 T6651 nmod h,sites
R4117 T6600 T6601 compound →,3-D-glucans
R4118 T6601 T6602 nsubj 3-D-glucans,induced
R4119 T6602 T6597 ccomp induced,reported
R4120 T6644 T6643 punct ),h
R4121 T6603 T6607 advmod only,secretion
R4122 T6604 T6607 det a,secretion
R4123 T6605 T6607 amod limited,secretion
R4124 T6645 T6643 cc and,h
R4125 T6606 T6607 compound cytokine,secretion
R4126 T6607 T6602 dobj secretion,induced
R4127 T6608 T6607 prep of,secretion
R4128 T6646 T6649 nummod six,factor
R4129 T6609 T6611 amod human,cells
R4130 T6647 T6649 amod additional,factor
R4131 T6610 T6611 compound blood,cells
R4132 T6611 T6608 pobj cells,of
R4133 T6648 T6649 compound transcription,factor
R4134 T6612 T6614 compound [,]
R4135 T6613 T6614 compound 15-18,]
R4136 T6614 T6607 appos ],secretion
R4137 T6649 T6651 nmod factor,sites
R4138 T6650 T6651 amod binding,sites
R4139 T6615 T6597 punct .,reported
R4140 T6616 T6656 advcl Corroborating,revealed
R4141 T6651 T6625 conj sites,examining
R4142 T6617 T6616 cc and,Corroborating
R4143 T6618 T6616 conj extending,Corroborating
R4144 T6652 T6656 punct ",",revealed
R4145 T6619 T6621 det these,findings
R4146 T6620 T6621 amod singular,findings
R4147 T6621 T6618 dobj findings,extending
R4148 T6653 T6655 poss our,analysis
R4149 T6622 T6618 prep in,extending
R4150 T6623 T6622 pobj terms,in
R4151 T6624 T6623 prep of,terms
R4152 T6654 T6655 amod comprehensive,analysis
R4153 T6625 T6624 pcomp examining,of
R4154 T6626 T6625 dobj pro-,examining
R4155 T6627 T6626 punct (,pro-
R4156 T6628 T6626 appos eight,pro-
R4157 T6655 T6656 nsubj analysis,revealed
R4158 T6629 T6626 punct ),pro-
R4159 T6630 T6632 advmod as,as
R4160 T6631 T6632 advmod well,as
R4161 T6656 T6656 ROOT revealed,revealed
R4162 T6632 T6633 nummod as,anti-
R4163 T6633 T6625 advcl anti-,examining
R4164 T6657 T6660 det the,profile
R4165 T6634 T6635 punct (,three
R4166 T6635 T6633 appos three,anti-
R4167 T6636 T6635 punct ),three
R4168 T6658 T6660 amod following,profile
R4169 T6659 T6660 compound cytokine,profile
R4170 T6660 T6656 dobj profile,revealed
R4171 T6661 T6660 prep of,profile
R4174 T6662 T6663 amod human,leukocytes
R4177 T6663 T6661 pobj leukocytes,of
R4181 T6664 T6656 prep in,revealed
R4184 T6665 T6664 pobj response,in
R4191 T6666 T6665 prep to,response
R4196 T6667 T6674 det a,3-D-glucan
R4199 T6668 T6669 advmod highly,purified
R4203 T6669 T6674 amod purified,3-D-glucan
R4208 T6670 T6674 nmod water,3-D-glucan
R4212 T6671 T6674 amod soluble,3-D-glucan
R4215 T6672 T6674 amod β-1,3-D-glucan
R4216 T6673 T6674 compound →,3-D-glucan
R4217 T6674 T6666 pobj 3-D-glucan,to
R4220 T6675 T6666 cc and,to
R4223 T6676 T6656 prep in,revealed
R4228 T6677 T6676 pobj comparison,in
R4231 T6678 T6677 prep to,comparison
R4234 T6679 T6681 nummod two,mediators
R4242 T6680 T6681 amod pro-inflammatory,mediators
R4246 T6681 T6678 pobj mediators,to
R4250 T6682 T6681 punct (,mediators
R4254 T6683 T6681 appos LPS,mediators
R4258 T6684 T6683 punct ",",LPS
R4262 T6685 T6683 appos TSST-1,LPS
R4266 T6686 T6681 punct ),mediators
R4270 T6687 T6681 punct :,mediators

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6224 165-175 Gene_expression denotes production
T6223 165-175 Gene_expression denotes production
T6222 165-175 Gene_expression denotes production
T6221 165-175 Gene_expression denotes production
T6220 197-201 Protein denotes IFNγ
T6219 191-195 Protein denotes IL-6
T6218 185-189 Protein denotes IL-8
T6217 179-183 Protein denotes TNFα
T6216 83-97 Protein denotes IFNγ promoters
T6215 74-78 Protein denotes IL-6
T6214 62-72 Protein denotes TNFα, IL-8
R3880 T6218 T6222 themeOf IL-8,production
R3882 T6219 T6223 themeOf IL-6,production
R3883 T6220 T6224 themeOf IFNγ,production
R3878 T6217 T6221 themeOf TNFα,production

testone

Id Subject Object Predicate Lexical cue
T4483 157-161 Positive_regulation denotes lead
T4418 773-779 Protein denotes TSST-1
T4417 197-201 Protein denotes IFNγ
T4416 191-195 Protein denotes IL-6
T4415 185-189 Protein denotes IL-8
T4414 179-183 Protein denotes TNFα
T4413 83-87 Protein denotes IFNγ
T4412 74-78 Protein denotes IL-6
T4411 68-72 Protein denotes IL-8
T4410 62-66 Protein denotes TNFα
T4484 165-175 Gene_expression denotes production
R2716 T4414 T4484 themeOf TNFα,production
R2717 T4415 T4484 themeOf IL-8,production
R2718 T4416 T4484 themeOf IL-6,production
R2719 T4417 T4484 themeOf IFNγ,production
R2767 T4484 T4483 themeOf production,lead

test3

Id Subject Object Predicate Lexical cue
T4615 773-779 Protein denotes TSST-1
T4614 197-201 Protein denotes IFNγ
T4613 191-195 Protein denotes IL-6
T4612 185-189 Protein denotes IL-8
T4611 179-183 Protein denotes TNFα
T4610 165-175 Gene_expression denotes production
T4609 157-161 Positive_regulation denotes lead
T4608 83-87 Protein denotes IFNγ
T4607 74-78 Protein denotes IL-6
T4606 68-72 Protein denotes IL-8
T4605 62-66 Protein denotes TNFα
T4539 773-779 Protein denotes TSST-1
T4538 197-201 Protein denotes IFNγ
T4537 191-195 Protein denotes IL-6
T4536 185-189 Protein denotes IL-8
T4535 179-183 Protein denotes TNFα
T4534 83-87 Protein denotes IFNγ
T4533 74-78 Protein denotes IL-6
T4532 68-72 Protein denotes IL-8
T4531 62-66 Protein denotes TNFα
R2792 T4610 T4609 themeOf production,lead
R2793 T4611 T4610 themeOf TNFα,production
R2794 T4612 T4610 themeOf IL-8,production
R2795 T4613 T4610 themeOf IL-6,production
R2796 T4614 T4610 themeOf IFNγ,production