PMC:1420271 / 5868-6067
Annnotations
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3826 | 40-44 | PR:000006847 | denotes | ESG1 |
| T3827 | 45-49 | SO:0000704 | denotes | gene |
| T3828 | 67-76 | NCBITaxon:2 | denotes | bacterial |
| T3829 | 67-98 | SO:0000153 | denotes | bacterial artificial chromosome |
| T3830 | 100-103 | SO:0000153 | denotes | BAC |
| T3831 | 127-133 | SO:0000112 | denotes | primer |
| T3832 | 173-177 | SO:0000704 | denotes | gene |
| T3833 | 187-198 | SO:0000336 | denotes | pseudogenes |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3935 | 11-14 | CHEBI_SO_EXT:DNA | denotes | DNA |
| T3936 | 40-44 | PR_EXT:000006847 | denotes | ESG1 |
| T3937 | 45-49 | SO_EXT:0000704 | denotes | gene |
| T3938 | 67-76 | NCBITaxon:2 | denotes | bacterial |
| T3939 | 67-98 | SO_EXT:0000153 | denotes | bacterial artificial chromosome |
| T3940 | 88-98 | GO_SO_EXT:chromosome | denotes | chromosome |
| T3941 | 100-103 | SO_EXT:0000153 | denotes | BAC |
| T3942 | 105-108 | CHEBI_SO_EXT:DNA | denotes | DNA |
| T3943 | 127-133 | SO_EXT:0000112 | denotes | primer |
| T3944 | 173-177 | SO_EXT:0000704 | denotes | gene |
| T3945 | 187-198 | SO_EXT:0000336 | denotes | pseudogenes |
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4279 | 0-199 | sentence | denotes | To obtain DNA fragments containing the ESG1 gene, we screened the bacterial artificial chromosome (BAC) DNA pool by PCR using primer pairs that would only amplify the real gene, not the pseudogenes. |
| T4280 | 1-3 | TO | denotes | To |
| T4281 | 4-10 | VB | denotes | obtain |
| T4282 | 54-62 | VBD | denotes | screened |
| T4283 | 11-14 | NN | denotes | DNA |
| T4284 | 15-24 | NNS | denotes | fragments |
| T4285 | 25-35 | VBG | denotes | containing |
| T4286 | 36-39 | DT | denotes | the |
| T4287 | 45-49 | NN | denotes | gene |
| T4288 | 40-44 | NN | denotes | ESG1 |
| T4289 | 49-51 | , | denotes | , |
| T4290 | 51-53 | PRP | denotes | we |
| T4291 | 63-66 | DT | denotes | the |
| T4292 | 109-113 | NN | denotes | pool |
| T4293 | 67-76 | JJ | denotes | bacterial |
| T4294 | 88-98 | NN | denotes | chromosome |
| T4295 | 77-87 | JJ | denotes | artificial |
| T4296 | 99-100 | -LRB- | denotes | ( |
| T4297 | 100-103 | NN | denotes | BAC |
| T4298 | 103-104 | -RRB- | denotes | ) |
| T4299 | 105-108 | NN | denotes | DNA |
| T4300 | 114-116 | IN | denotes | by |
| T4301 | 117-120 | NN | denotes | PCR |
| T4302 | 121-126 | VBG | denotes | using |
| T4303 | 127-133 | NN | denotes | primer |
| T4304 | 134-139 | NNS | denotes | pairs |
| T4305 | 140-144 | WDT | denotes | that |
| T4306 | 156-163 | VB | denotes | amplify |
| T4307 | 145-150 | MD | denotes | would |
| T4308 | 151-155 | RB | denotes | only |
| T4309 | 164-167 | DT | denotes | the |
| T4310 | 173-177 | NN | denotes | gene |
| T4311 | 168-172 | JJ | denotes | real |
| T4312 | 177-179 | , | denotes | , |
| T4313 | 179-182 | RB | denotes | not |
| T4314 | 187-198 | NNS | denotes | pseudogenes |
| T4315 | 183-186 | DT | denotes | the |
| T4316 | 198-199 | . | denotes | . |
| R969 | T4280 | T4281 | aux | To,obtain |
| R970 | T4281 | T4282 | advcl | obtain,screened |
| R971 | T4283 | T4284 | compound | DNA,fragments |
| R972 | T4284 | T4281 | dobj | fragments,obtain |
| R973 | T4285 | T4284 | acl | containing,fragments |
| R974 | T4286 | T4287 | det | the,gene |
| R975 | T4287 | T4285 | dobj | gene,containing |
| R976 | T4288 | T4287 | compound | ESG1,gene |
| R977 | T4289 | T4282 | punct | ", ",screened |
| R978 | T4290 | T4282 | nsubj | we,screened |
| R979 | T4291 | T4292 | det | the,pool |
| R980 | T4292 | T4282 | dobj | pool,screened |
| R981 | T4293 | T4294 | amod | bacterial,chromosome |
| R982 | T4294 | T4292 | nmod | chromosome,pool |
| R983 | T4295 | T4294 | amod | artificial,chromosome |
| R984 | T4296 | T4294 | punct | (,chromosome |
| R985 | T4297 | T4294 | appos | BAC,chromosome |
| R986 | T4298 | T4292 | punct | ),pool |
| R987 | T4299 | T4292 | compound | DNA,pool |
| R988 | T4300 | T4282 | prep | by,screened |
| R989 | T4301 | T4300 | pobj | PCR,by |
| R990 | T4302 | T4282 | advcl | using,screened |
| R991 | T4303 | T4304 | compound | primer,pairs |
| R992 | T4304 | T4302 | dobj | pairs,using |
| R993 | T4305 | T4306 | dep | that,amplify |
| R994 | T4306 | T4304 | relcl | amplify,pairs |
| R995 | T4307 | T4306 | aux | would,amplify |
| R996 | T4308 | T4306 | advmod | only,amplify |
| R997 | T4309 | T4310 | det | the,gene |
| R998 | T4310 | T4306 | dobj | gene,amplify |
| R999 | T4311 | T4310 | amod | real,gene |
| R1000 | T4312 | T4306 | punct | ", ",amplify |
| R1001 | T4313 | T4314 | neg | not,pseudogenes |
| R1002 | T4314 | T4306 | dep | pseudogenes,amplify |
| R1003 | T4315 | T4314 | det | the,pseudogenes |
| R1004 | T4316 | T4282 | punct | .,screened |