PMC:138691 / 3317-3561
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/138691","sourcedb":"PMC","sourceid":"138691","source_url":"http://www.ncbi.nlm.nih.gov/pmc/138691","text":" The DNA substrate contains a pair of mutated GFP genes (GFP encodes the easily detected green fluorescent protein), one of which contains a restriction site for I-SceI, a yeast intron encoded endonuclease with an 18 base pair recognition site.","tracks":[{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T1742","span":{"begin":5,"end":8},"obj":"CHEBI_SO_EXT:DNA"},{"id":"T1743","span":{"begin":38,"end":45},"obj":"SO_EXT:sequence_alteration_process"},{"id":"T1744","span":{"begin":50,"end":55},"obj":"SO_EXT:0000704"},{"id":"T1745","span":{"begin":61,"end":68},"obj":"SO_EXT:sequence_coding_function"},{"id":"T1746","span":{"begin":107,"end":114},"obj":"CHEBI_PR_EXT:protein"},{"id":"T1747","span":{"begin":141,"end":157},"obj":"SO_EXT:0000061"},{"id":"T1748","span":{"begin":162,"end":168},"obj":"PR_EXT:P03882"},{"id":"T1749","span":{"begin":172,"end":177},"obj":"NCBITaxon_EXT:yeast"},{"id":"T1750","span":{"begin":178,"end":184},"obj":"SO_EXT:0000188"},{"id":"T1751","span":{"begin":185,"end":192},"obj":"SO_EXT:sequence_coding_function"},{"id":"T1752","span":{"begin":193,"end":205},"obj":"GO_EXT:0004519"},{"id":"T1753","span":{"begin":217,"end":221},"obj":"CHEBI_SO_EXT:base"},{"id":"T1754","span":{"begin":217,"end":226},"obj":"SO_EXT:0000028"},{"id":"T1755","span":{"begin":227,"end":243},"obj":"SO_EXT:0000409"}],"attributes":[{"subj":"T1742","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1743","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1744","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1745","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1746","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1747","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1748","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1749","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1750","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1751","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1752","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1753","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1754","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T1755","pred":"source","obj":"craft-ca-core-ex-dev"}]},{"project":"craft-ca-core-dev","denotations":[{"id":"T941","span":{"begin":50,"end":55},"obj":"SO:0000704"},{"id":"T942","span":{"begin":141,"end":157},"obj":"SO:0000061"},{"id":"T943","span":{"begin":162,"end":168},"obj":"PR:P03882"},{"id":"T944","span":{"begin":178,"end":184},"obj":"SO:0000188"},{"id":"T945","span":{"begin":217,"end":226},"obj":"SO:0000028"},{"id":"T946","span":{"begin":227,"end":243},"obj":"SO:0000409"}],"attributes":[{"subj":"T941","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T942","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T943","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T944","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T945","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T946","pred":"source","obj":"craft-ca-core-dev"}]},{"project":"craft-sa-dev","denotations":[{"id":"T1029","span":{"begin":0,"end":244},"obj":"sentence"},{"id":"T1030","span":{"begin":1,"end":4},"obj":"DT"},{"id":"T1031","span":{"begin":9,"end":18},"obj":"NN"},{"id":"T1032","span":{"begin":5,"end":8},"obj":"NN"},{"id":"T1033","span":{"begin":19,"end":27},"obj":"VBZ"},{"id":"T1034","span":{"begin":28,"end":29},"obj":"DT"},{"id":"T1035","span":{"begin":30,"end":34},"obj":"NN"},{"id":"T1036","span":{"begin":35,"end":37},"obj":"IN"},{"id":"T1037","span":{"begin":38,"end":45},"obj":"VBN"},{"id":"T1038","span":{"begin":50,"end":55},"obj":"NNS"},{"id":"T1039","span":{"begin":46,"end":49},"obj":"NN"},{"id":"T1040","span":{"begin":56,"end":57},"obj":"-LRB-"},{"id":"T1041","span":{"begin":61,"end":68},"obj":"VBZ"},{"id":"T1042","span":{"begin":57,"end":60},"obj":"NN"},{"id":"T1043","span":{"begin":69,"end":72},"obj":"DT"},{"id":"T1044","span":{"begin":107,"end":114},"obj":"NN"},{"id":"T1045","span":{"begin":73,"end":79},"obj":"RB"},{"id":"T1046","span":{"begin":80,"end":88},"obj":"VBN"},{"id":"T1047","span":{"begin":89,"end":94},"obj":"JJ"},{"id":"T1048","span":{"begin":95,"end":106},"obj":"JJ"},{"id":"T1049","span":{"begin":114,"end":115},"obj":"-RRB-"},{"id":"T1050","span":{"begin":115,"end":117},"obj":","},{"id":"T1051","span":{"begin":117,"end":120},"obj":"CD"},{"id":"T1052","span":{"begin":130,"end":138},"obj":"VBZ"},{"id":"T1053","span":{"begin":121,"end":123},"obj":"IN"},{"id":"T1054","span":{"begin":124,"end":129},"obj":"WDT"},{"id":"T1055","span":{"begin":139,"end":140},"obj":"DT"},{"id":"T1056","span":{"begin":153,"end":157},"obj":"NN"},{"id":"T1057","span":{"begin":141,"end":152},"obj":"NN"},{"id":"T1058","span":{"begin":158,"end":161},"obj":"IN"},{"id":"T1059","span":{"begin":162,"end":163},"obj":"NN"},{"id":"T1060","span":{"begin":164,"end":168},"obj":"NN"},{"id":"T1061","span":{"begin":163,"end":164},"obj":"HYPH"},{"id":"T1062","span":{"begin":168,"end":170},"obj":","},{"id":"T1063","span":{"begin":170,"end":171},"obj":"DT"},{"id":"T1064","span":{"begin":193,"end":205},"obj":"NN"},{"id":"T1065","span":{"begin":172,"end":177},"obj":"NN"},{"id":"T1066","span":{"begin":178,"end":184},"obj":"NN"},{"id":"T1067","span":{"begin":185,"end":192},"obj":"VBN"},{"id":"T1068","span":{"begin":206,"end":210},"obj":"IN"},{"id":"T1069","span":{"begin":211,"end":213},"obj":"DT"},{"id":"T1070","span":{"begin":239,"end":243},"obj":"NN"},{"id":"T1071","span":{"begin":214,"end":216},"obj":"CD"},{"id":"T1072","span":{"begin":222,"end":226},"obj":"NN"},{"id":"T1073","span":{"begin":217,"end":221},"obj":"NN"},{"id":"T1074","span":{"begin":227,"end":238},"obj":"NN"},{"id":"T1075","span":{"begin":243,"end":244},"obj":"."}],"relations":[{"id":"R590","pred":"det","subj":"T1030","obj":"T1031"},{"id":"R591","pred":"nsubj","subj":"T1031","obj":"T1033"},{"id":"R592","pred":"compound","subj":"T1032","obj":"T1031"},{"id":"R593","pred":"det","subj":"T1034","obj":"T1035"},{"id":"R594","pred":"dobj","subj":"T1035","obj":"T1033"},{"id":"R595","pred":"prep","subj":"T1036","obj":"T1035"},{"id":"R596","pred":"amod","subj":"T1037","obj":"T1038"},{"id":"R597","pred":"pobj","subj":"T1038","obj":"T1036"},{"id":"R598","pred":"compound","subj":"T1039","obj":"T1038"},{"id":"R599","pred":"punct","subj":"T1040","obj":"T1041"},{"id":"R600","pred":"parataxis","subj":"T1041","obj":"T1035"},{"id":"R601","pred":"nsubj","subj":"T1042","obj":"T1041"},{"id":"R602","pred":"det","subj":"T1043","obj":"T1044"},{"id":"R603","pred":"dobj","subj":"T1044","obj":"T1041"},{"id":"R604","pred":"advmod","subj":"T1045","obj":"T1046"},{"id":"R605","pred":"amod","subj":"T1046","obj":"T1044"},{"id":"R606","pred":"amod","subj":"T1047","obj":"T1044"},{"id":"R607","pred":"amod","subj":"T1048","obj":"T1044"},{"id":"R608","pred":"punct","subj":"T1049","obj":"T1041"},{"id":"R609","pred":"punct","subj":"T1050","obj":"T1035"},{"id":"R610","pred":"dep","subj":"T1051","obj":"T1052"},{"id":"R611","pred":"relcl","subj":"T1052","obj":"T1035"},{"id":"R612","pred":"prep","subj":"T1053","obj":"T1051"},{"id":"R613","pred":"pobj","subj":"T1054","obj":"T1053"},{"id":"R614","pred":"det","subj":"T1055","obj":"T1056"},{"id":"R615","pred":"dobj","subj":"T1056","obj":"T1052"},{"id":"R616","pred":"compound","subj":"T1057","obj":"T1056"},{"id":"R617","pred":"prep","subj":"T1058","obj":"T1056"},{"id":"R618","pred":"compound","subj":"T1059","obj":"T1060"},{"id":"R619","pred":"pobj","subj":"T1060","obj":"T1058"},{"id":"R620","pred":"punct","subj":"T1061","obj":"T1060"},{"id":"R621","pred":"punct","subj":"T1062","obj":"T1060"},{"id":"R622","pred":"det","subj":"T1063","obj":"T1064"},{"id":"R623","pred":"appos","subj":"T1064","obj":"T1060"},{"id":"R624","pred":"compound","subj":"T1065","obj":"T1066"},{"id":"R625","pred":"npadvmod","subj":"T1066","obj":"T1067"},{"id":"R626","pred":"amod","subj":"T1067","obj":"T1064"},{"id":"R627","pred":"prep","subj":"T1068","obj":"T1064"},{"id":"R628","pred":"det","subj":"T1069","obj":"T1070"},{"id":"R629","pred":"pobj","subj":"T1070","obj":"T1068"},{"id":"R630","pred":"nummod","subj":"T1071","obj":"T1072"},{"id":"R631","pred":"compound","subj":"T1072","obj":"T1070"},{"id":"R632","pred":"compound","subj":"T1073","obj":"T1072"},{"id":"R633","pred":"compound","subj":"T1074","obj":"T1070"},{"id":"R634","pred":"punct","subj":"T1075","obj":"T1033"}],"attributes":[{"subj":"T1029","pred":"source","obj":"craft-sa-dev"},{"subj":"T1030","pred":"source","obj":"craft-sa-dev"},{"subj":"T1031","pred":"source","obj":"craft-sa-dev"},{"subj":"T1032","pred":"source","obj":"craft-sa-dev"},{"subj":"T1033","pred":"source","obj":"craft-sa-dev"},{"subj":"T1034","pred":"source","obj":"craft-sa-dev"},{"subj":"T1035","pred":"source","obj":"craft-sa-dev"},{"subj":"T1036","pred":"source","obj":"craft-sa-dev"},{"subj":"T1037","pred":"source","obj":"craft-sa-dev"},{"subj":"T1038","pred":"source","obj":"craft-sa-dev"},{"subj":"T1039","pred":"source","obj":"craft-sa-dev"},{"subj":"T1040","pred":"source","obj":"craft-sa-dev"},{"subj":"T1041","pred":"source","obj":"craft-sa-dev"},{"subj":"T1042","pred":"source","obj":"craft-sa-dev"},{"subj":"T1043","pred":"source","obj":"craft-sa-dev"},{"subj":"T1044","pred":"source","obj":"craft-sa-dev"},{"subj":"T1045","pred":"source","obj":"craft-sa-dev"},{"subj":"T1046","pred":"source","obj":"craft-sa-dev"},{"subj":"T1047","pred":"source","obj":"craft-sa-dev"},{"subj":"T1048","pred":"source","obj":"craft-sa-dev"},{"subj":"T1049","pred":"source","obj":"craft-sa-dev"},{"subj":"T1050","pred":"source","obj":"craft-sa-dev"},{"subj":"T1051","pred":"source","obj":"craft-sa-dev"},{"subj":"T1052","pred":"source","obj":"craft-sa-dev"},{"subj":"T1053","pred":"source","obj":"craft-sa-dev"},{"subj":"T1054","pred":"source","obj":"craft-sa-dev"},{"subj":"T1055","pred":"source","obj":"craft-sa-dev"},{"subj":"T1056","pred":"source","obj":"craft-sa-dev"},{"subj":"T1057","pred":"source","obj":"craft-sa-dev"},{"subj":"T1058","pred":"source","obj":"craft-sa-dev"},{"subj":"T1059","pred":"source","obj":"craft-sa-dev"},{"subj":"T1060","pred":"source","obj":"craft-sa-dev"},{"subj":"T1061","pred":"source","obj":"craft-sa-dev"},{"subj":"T1062","pred":"source","obj":"craft-sa-dev"},{"subj":"T1063","pred":"source","obj":"craft-sa-dev"},{"subj":"T1064","pred":"source","obj":"craft-sa-dev"},{"subj":"T1065","pred":"source","obj":"craft-sa-dev"},{"subj":"T1066","pred":"source","obj":"craft-sa-dev"},{"subj":"T1067","pred":"source","obj":"craft-sa-dev"},{"subj":"T1068","pred":"source","obj":"craft-sa-dev"},{"subj":"T1069","pred":"source","obj":"craft-sa-dev"},{"subj":"T1070","pred":"source","obj":"craft-sa-dev"},{"subj":"T1071","pred":"source","obj":"craft-sa-dev"},{"subj":"T1072","pred":"source","obj":"craft-sa-dev"},{"subj":"T1073","pred":"source","obj":"craft-sa-dev"},{"subj":"T1074","pred":"source","obj":"craft-sa-dev"},{"subj":"T1075","pred":"source","obj":"craft-sa-dev"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"craft-ca-core-ex-dev","color":"#93a8ec","default":true},{"id":"craft-ca-core-dev","color":"#c2ec93"},{"id":"craft-sa-dev","color":"#ec93dc"}]}]}}