PMC:138691 / 3317-3561
Annnotations
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1742 | 5-8 | CHEBI_SO_EXT:DNA | denotes | DNA |
| T1743 | 38-45 | SO_EXT:sequence_alteration_process | denotes | mutated |
| T1744 | 50-55 | SO_EXT:0000704 | denotes | genes |
| T1745 | 61-68 | SO_EXT:sequence_coding_function | denotes | encodes |
| T1746 | 107-114 | CHEBI_PR_EXT:protein | denotes | protein |
| T1747 | 141-157 | SO_EXT:0000061 | denotes | restriction site |
| T1748 | 162-168 | PR_EXT:P03882 | denotes | I-SceI |
| T1749 | 172-177 | NCBITaxon_EXT:yeast | denotes | yeast |
| T1750 | 178-184 | SO_EXT:0000188 | denotes | intron |
| T1751 | 185-192 | SO_EXT:sequence_coding_function | denotes | encoded |
| T1752 | 193-205 | GO_EXT:0004519 | denotes | endonuclease |
| T1753 | 217-221 | CHEBI_SO_EXT:base | denotes | base |
| T1754 | 217-226 | SO_EXT:0000028 | denotes | base pair |
| T1755 | 227-243 | SO_EXT:0000409 | denotes | recognition site |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T941 | 50-55 | SO:0000704 | denotes | genes |
| T942 | 141-157 | SO:0000061 | denotes | restriction site |
| T943 | 162-168 | PR:P03882 | denotes | I-SceI |
| T944 | 178-184 | SO:0000188 | denotes | intron |
| T945 | 217-226 | SO:0000028 | denotes | base pair |
| T946 | 227-243 | SO:0000409 | denotes | recognition site |
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1029 | 0-244 | sentence | denotes | The DNA substrate contains a pair of mutated GFP genes (GFP encodes the easily detected green fluorescent protein), one of which contains a restriction site for I-SceI, a yeast intron encoded endonuclease with an 18 base pair recognition site. |
| T1030 | 1-4 | DT | denotes | The |
| T1031 | 9-18 | NN | denotes | substrate |
| T1032 | 5-8 | NN | denotes | DNA |
| T1033 | 19-27 | VBZ | denotes | contains |
| T1034 | 28-29 | DT | denotes | a |
| T1035 | 30-34 | NN | denotes | pair |
| T1036 | 35-37 | IN | denotes | of |
| T1037 | 38-45 | VBN | denotes | mutated |
| T1038 | 50-55 | NNS | denotes | genes |
| T1039 | 46-49 | NN | denotes | GFP |
| T1040 | 56-57 | -LRB- | denotes | ( |
| T1041 | 61-68 | VBZ | denotes | encodes |
| T1042 | 57-60 | NN | denotes | GFP |
| T1043 | 69-72 | DT | denotes | the |
| T1044 | 107-114 | NN | denotes | protein |
| T1045 | 73-79 | RB | denotes | easily |
| T1046 | 80-88 | VBN | denotes | detected |
| T1047 | 89-94 | JJ | denotes | green |
| T1048 | 95-106 | JJ | denotes | fluorescent |
| T1049 | 114-115 | -RRB- | denotes | ) |
| T1050 | 115-117 | , | denotes | , |
| T1051 | 117-120 | CD | denotes | one |
| T1052 | 130-138 | VBZ | denotes | contains |
| T1053 | 121-123 | IN | denotes | of |
| T1054 | 124-129 | WDT | denotes | which |
| T1055 | 139-140 | DT | denotes | a |
| T1056 | 153-157 | NN | denotes | site |
| T1057 | 141-152 | NN | denotes | restriction |
| T1058 | 158-161 | IN | denotes | for |
| T1059 | 162-163 | NN | denotes | I |
| T1060 | 164-168 | NN | denotes | SceI |
| T1061 | 163-164 | HYPH | denotes | - |
| T1062 | 168-170 | , | denotes | , |
| T1063 | 170-171 | DT | denotes | a |
| T1064 | 193-205 | NN | denotes | endonuclease |
| T1065 | 172-177 | NN | denotes | yeast |
| T1066 | 178-184 | NN | denotes | intron |
| T1067 | 185-192 | VBN | denotes | encoded |
| T1068 | 206-210 | IN | denotes | with |
| T1069 | 211-213 | DT | denotes | an |
| T1070 | 239-243 | NN | denotes | site |
| T1071 | 214-216 | CD | denotes | 18 |
| T1072 | 222-226 | NN | denotes | pair |
| T1073 | 217-221 | NN | denotes | base |
| T1074 | 227-238 | NN | denotes | recognition |
| T1075 | 243-244 | . | denotes | . |
| R590 | T1030 | T1031 | det | The,substrate |
| R591 | T1031 | T1033 | nsubj | substrate,contains |
| R592 | T1032 | T1031 | compound | DNA,substrate |
| R593 | T1034 | T1035 | det | a,pair |
| R594 | T1035 | T1033 | dobj | pair,contains |
| R595 | T1036 | T1035 | prep | of,pair |
| R596 | T1037 | T1038 | amod | mutated,genes |
| R597 | T1038 | T1036 | pobj | genes,of |
| R598 | T1039 | T1038 | compound | GFP,genes |
| R599 | T1040 | T1041 | punct | (,encodes |
| R600 | T1041 | T1035 | parataxis | encodes,pair |
| R601 | T1042 | T1041 | nsubj | GFP,encodes |
| R602 | T1043 | T1044 | det | the,protein |
| R603 | T1044 | T1041 | dobj | protein,encodes |
| R604 | T1045 | T1046 | advmod | easily,detected |
| R605 | T1046 | T1044 | amod | detected,protein |
| R606 | T1047 | T1044 | amod | green,protein |
| R607 | T1048 | T1044 | amod | fluorescent,protein |
| R608 | T1049 | T1041 | punct | ),encodes |
| R609 | T1050 | T1035 | punct | ", ",pair |
| R610 | T1051 | T1052 | dep | one,contains |
| R611 | T1052 | T1035 | relcl | contains,pair |
| R612 | T1053 | T1051 | prep | of,one |
| R613 | T1054 | T1053 | pobj | which,of |
| R614 | T1055 | T1056 | det | a,site |
| R615 | T1056 | T1052 | dobj | site,contains |
| R616 | T1057 | T1056 | compound | restriction,site |
| R617 | T1058 | T1056 | prep | for,site |
| R618 | T1059 | T1060 | compound | I,SceI |
| R619 | T1060 | T1058 | pobj | SceI,for |
| R620 | T1061 | T1060 | punct | -,SceI |
| R621 | T1062 | T1060 | punct | ", ",SceI |
| R622 | T1063 | T1064 | det | a,endonuclease |
| R623 | T1064 | T1060 | appos | endonuclease,SceI |
| R624 | T1065 | T1066 | compound | yeast,intron |
| R625 | T1066 | T1067 | npadvmod | intron,encoded |
| R626 | T1067 | T1064 | amod | encoded,endonuclease |
| R627 | T1068 | T1064 | prep | with,endonuclease |
| R628 | T1069 | T1070 | det | an,site |
| R629 | T1070 | T1068 | pobj | site,with |
| R630 | T1071 | T1072 | nummod | 18,pair |
| R631 | T1072 | T1070 | compound | pair,site |
| R632 | T1073 | T1072 | compound | base,pair |
| R633 | T1074 | T1070 | compound | recognition,site |
| R634 | T1075 | T1033 | punct | .,contains |