PMC:1359074 / 39964-40104 JSONTXT

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{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T18716","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T18715","span":{"begin":28,"end":30},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T18888","span":{"begin":103,"end":107},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"sentences","denotations":[{"id":"T18708","span":{"begin":0,"end":140},"obj":"Sentence"},{"id":"T305","span":{"begin":0,"end":140},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"simple1","denotations":[{"id":"T18722","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T18721","span":{"begin":28,"end":30},"obj":"Protein"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"BioNLP16_DUT","denotations":[{"id":"T19096","span":{"begin":108,"end":122},"obj":"Gene_expression"},{"id":"T19095","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T19094","span":{"begin":28,"end":30},"obj":"Protein"}],"relations":[{"id":"R13574","pred":"themeOf","subj":"T19095","obj":"T19096"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T18891","span":{"begin":108,"end":122},"obj":"Gene_expression"},{"id":"T18890","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T18889","span":{"begin":28,"end":30},"obj":"Protein"}],"relations":[{"id":"R13396","pred":"themeOf","subj":"T18890","obj":"T18891"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"DLUT931","denotations":[{"id":"T18898","span":{"begin":108,"end":122},"obj":"Gene_expression"},{"id":"T18897","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T18896","span":{"begin":28,"end":30},"obj":"Protein"}],"relations":[{"id":"R13397","pred":"themeOf","subj":"T18897","obj":"T18898"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T19093","span":{"begin":103,"end":129},"obj":"Gene_expression"},{"id":"T19092","span":{"begin":103,"end":129},"obj":"Positive_regulation"},{"id":"T19089","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T19084","span":{"begin":0,"end":5},"obj":"Entity"},{"id":"T19083","span":{"begin":31,"end":39},"obj":"Entity"},{"id":"T19077","span":{"begin":23,"end":30},"obj":"Protein"}],"relations":[{"id":"R13572","pred":"themeOf","subj":"T19089","obj":"T19092"},{"id":"R13573","pred":"themeOf","subj":"T19089","obj":"T19093"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T19036","span":{"begin":123,"end":129},"obj":"NN"},{"id":"T19035","span":{"begin":108,"end":122},"obj":"NN"},{"id":"T19034","span":{"begin":103,"end":107},"obj":"JJ"},{"id":"T19033","span":{"begin":100,"end":102},"obj":"CC"},{"id":"T19032","span":{"begin":93,"end":99},"obj":"NN"},{"id":"T19031","span":{"begin":87,"end":92},"obj":"JJ"},{"id":"T19030","span":{"begin":80,"end":86},"obj":"DT"},{"id":"T19029","span":{"begin":75,"end":79},"obj":"IN"},{"id":"T19028","span":{"begin":69,"end":74},"obj":"IN"},{"id":"T19027","span":{"begin":67,"end":68},"obj":"-RRB-"},{"id":"T19026","span":{"begin":65,"end":67},"obj":"NN"},{"id":"T19025","span":{"begin":61,"end":64},"obj":"CD"},{"id":"T19024","span":{"begin":60,"end":61},"obj":"-LRB-"},{"id":"T19023","span":{"begin":49,"end":59},"obj":"NNS"},{"id":"T19022","span":{"begin":40,"end":48},"obj":"NN"},{"id":"T19021","span":{"begin":31,"end":39},"obj":"NN"},{"id":"T19020","span":{"begin":28,"end":30},"obj":"JJ"},{"id":"T19019","span":{"begin":23,"end":27},"obj":"IN"},{"id":"T19018","span":{"begin":11,"end":22},"obj":"VBN"},{"id":"T19017","span":{"begin":6,"end":10},"obj":"VBD"},{"id":"T19016","span":{"begin":0,"end":5},"obj":"NNS"},{"id":"T19041","span":{"begin":139,"end":140},"obj":"."},{"id":"T19040","span":{"begin":138,"end":139},"obj":"-RRB-"},{"id":"T19039","span":{"begin":136,"end":138},"obj":"NN"},{"id":"T19038","span":{"begin":131,"end":135},"obj":"CD"},{"id":"T19037","span":{"begin":130,"end":131},"obj":"-LRB-"}],"relations":[{"id":"R13513","pred":"nsubjpass","subj":"T19016","obj":"T19018"},{"id":"R13514","pred":"auxpass","subj":"T19017","obj":"T19018"},{"id":"R13515","pred":"ROOT","subj":"T19018","obj":"T19018"},{"id":"R13516","pred":"prep","subj":"T19019","obj":"T19018"},{"id":"R13517","pred":"amod","subj":"T19020","obj":"T19022"},{"id":"R13518","pred":"compound","subj":"T19021","obj":"T19022"},{"id":"R13519","pred":"compound","subj":"T19022","obj":"T19023"},{"id":"R13520","pred":"pobj","subj":"T19023","obj":"T19019"},{"id":"R13521","pred":"punct","subj":"T19024","obj":"T19023"},{"id":"R13522","pred":"nummod","subj":"T19025","obj":"T19026"},{"id":"R13523","pred":"appos","subj":"T19026","obj":"T19023"},{"id":"R13524","pred":"punct","subj":"T19027","obj":"T19023"},{"id":"R13525","pred":"prep","subj":"T19028","obj":"T19018"},{"id":"R13526","pred":"prep","subj":"T19029","obj":"T19028"},{"id":"R13527","pred":"preconj","subj":"T19030","obj":"T19032"},{"id":"R13528","pred":"amod","subj":"T19031","obj":"T19032"},{"id":"R13529","pred":"pobj","subj":"T19032","obj":"T19029"},{"id":"R13530","pred":"cc","subj":"T19033","obj":"T19032"},{"id":"R13531","pred":"amod","subj":"T19034","obj":"T19036"},{"id":"R13532","pred":"compound","subj":"T19035","obj":"T19036"},{"id":"R13533","pred":"conj","subj":"T19036","obj":"T19032"},{"id":"R13534","pred":"punct","subj":"T19037","obj":"T19036"},{"id":"R13535","pred":"nummod","subj":"T19038","obj":"T19039"},{"id":"R13536","pred":"appos","subj":"T19039","obj":"T19036"},{"id":"R13537","pred":"punct","subj":"T19040","obj":"T19036"},{"id":"R13538","pred":"punct","subj":"T19041","obj":"T19018"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T18895","span":{"begin":103,"end":107},"obj":"Protein"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"testone","denotations":[{"id":"T18697","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T18696","span":{"begin":28,"end":30},"obj":"Protein"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}

{"project":"test3","denotations":[{"id":"T18701","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T18700","span":{"begin":28,"end":30},"obj":"Protein"},{"id":"T18699","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T18698","span":{"begin":28,"end":30},"obj":"Protein"}],"text":"Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng)."}