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PMC:1359074 / 39964-40104 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18856 138-139 -RRB- denotes )
T18855 136-138 NN denotes ng
T18854 131-135 CD denotes 1000
T18853 130-131 -LRB- denotes (
T18852 123-129 NN denotes vector
T18851 108-122 NN denotes overexpression
T18850 103-107 NN denotes Sox6
T18849 100-102 CC denotes or
T18848 93-99 NN denotes vector
T18847 87-92 JJ denotes empty
T18846 80-86 CC denotes either
T18845 75-79 IN denotes with
T18844 69-74 IN denotes along
T18843 67-68 -RRB- denotes )
T18842 65-67 NN denotes ng
T18841 61-64 CD denotes 500
T18840 60-61 -LRB- denotes (
T18839 49-59 NN denotes constructs
T18838 40-48 NN denotes reporter
T18837 31-39 NN denotes promoter
T18836 28-30 JJ denotes ɛy
T18835 23-27 IN denotes with
T18834 11-22 VB denotes transfected
T18833 6-10 VB denotes were
T18832 0-5 NN denotes Cells
R13340 T18832 T18833 arg1Of Cells,were
R13341 T18832 T18834 arg2Of Cells,transfected
R13342 T18834 T18833 arg2Of transfected,were
R13343 T18834 T18835 arg1Of transfected,with
R13344 T18834 T18844 arg1Of transfected,along
R13345 T18839 T18835 arg2Of constructs,with
R13346 T18839 T18836 arg1Of constructs,ɛy
R13347 T18839 T18837 arg1Of constructs,promoter
R13348 T18839 T18838 arg1Of constructs,reporter
R13349 T18839 T18840 arg1Of constructs,(
R13350 T18842 T18840 arg2Of ng,(
R13351 T18842 T18841 arg1Of ng,500
R13352 T18843 T18840 arg3Of ),(
R13353 T18844 T18845 arg1Of along,with
R13354 T18848 T18847 arg1Of vector,empty
R13355 T18848 T18849 arg1Of vector,or
R13356 T18849 T18845 arg2Of or,with
R13357 T18849 T18846 arg1Of or,either
R13358 T18852 T18849 arg2Of vector,or
R13359 T18852 T18850 arg1Of vector,Sox6
R13360 T18852 T18851 arg1Of vector,overexpression
R13361 T18852 T18853 arg1Of vector,(
R13362 T18855 T18853 arg2Of ng,(
R13363 T18855 T18854 arg1Of ng,1000
R13364 T18856 T18853 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18716 103-107 Protein denotes Sox6
T18715 28-30 Protein denotes ɛy

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18888 103-107 http://www.uniprot.org/uniprot/P35712 denotes Sox6

sentences

Id Subject Object Predicate Lexical cue
T18708 0-140 Sentence denotes Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng).
T305 0-140 Sentence denotes Cells were transfected with ɛy promoter reporter constructs (500 ng) along with either empty vector or Sox6 overexpression vector (1000 ng).

simple1

Id Subject Object Predicate Lexical cue
T18722 103-107 Protein denotes Sox6
T18721 28-30 Protein denotes ɛy

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T19096 108-122 Gene_expression denotes overexpression
T19095 103-107 Protein denotes Sox6
T19094 28-30 Protein denotes ɛy
R13574 T19095 T19096 themeOf Sox6,overexpression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T18891 108-122 Gene_expression denotes overexpression
T18890 103-107 Protein denotes Sox6
T18889 28-30 Protein denotes ɛy
R13396 T18890 T18891 themeOf Sox6,overexpression

DLUT931

Id Subject Object Predicate Lexical cue
T18898 108-122 Gene_expression denotes overexpression
T18897 103-107 Protein denotes Sox6
T18896 28-30 Protein denotes ɛy
R13397 T18897 T18898 themeOf Sox6,overexpression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T19093 103-129 Gene_expression denotes Sox6 overexpression vector
T19092 103-129 Positive_regulation denotes Sox6 overexpression vector
T19089 103-107 Protein denotes Sox6
T19084 0-5 Entity denotes Cells
T19083 31-39 Entity denotes promoter
T19077 23-30 Protein denotes with ɛy
R13572 T19089 T19092 themeOf Sox6,Sox6 overexpression vector
R13573 T19089 T19093 themeOf Sox6,Sox6 overexpression vector

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T19036 123-129 NN denotes vector
T19035 108-122 NN denotes overexpression
T19034 103-107 JJ denotes Sox6
T19033 100-102 CC denotes or
T19032 93-99 NN denotes vector
T19031 87-92 JJ denotes empty
T19030 80-86 DT denotes either
T19029 75-79 IN denotes with
T19028 69-74 IN denotes along
T19027 67-68 -RRB- denotes )
T19026 65-67 NN denotes ng
T19025 61-64 CD denotes 500
T19024 60-61 -LRB- denotes (
T19023 49-59 NNS denotes constructs
T19022 40-48 NN denotes reporter
T19021 31-39 NN denotes promoter
T19020 28-30 JJ denotes ɛy
T19019 23-27 IN denotes with
T19018 11-22 VBN denotes transfected
T19017 6-10 VBD denotes were
T19016 0-5 NNS denotes Cells
T19041 139-140 . denotes .
T19040 138-139 -RRB- denotes )
T19039 136-138 NN denotes ng
T19038 131-135 CD denotes 1000
T19037 130-131 -LRB- denotes (
R13513 T19016 T19018 nsubjpass Cells,transfected
R13514 T19017 T19018 auxpass were,transfected
R13515 T19018 T19018 ROOT transfected,transfected
R13516 T19019 T19018 prep with,transfected
R13517 T19020 T19022 amod ɛy,reporter
R13518 T19021 T19022 compound promoter,reporter
R13519 T19022 T19023 compound reporter,constructs
R13520 T19023 T19019 pobj constructs,with
R13521 T19024 T19023 punct (,constructs
R13522 T19025 T19026 nummod 500,ng
R13523 T19026 T19023 appos ng,constructs
R13524 T19027 T19023 punct ),constructs
R13525 T19028 T19018 prep along,transfected
R13526 T19029 T19028 prep with,along
R13527 T19030 T19032 preconj either,vector
R13528 T19031 T19032 amod empty,vector
R13529 T19032 T19029 pobj vector,with
R13530 T19033 T19032 cc or,vector
R13531 T19034 T19036 amod Sox6,vector
R13532 T19035 T19036 compound overexpression,vector
R13533 T19036 T19032 conj vector,vector
R13534 T19037 T19036 punct (,vector
R13535 T19038 T19039 nummod 1000,ng
R13536 T19039 T19036 appos ng,vector
R13537 T19040 T19036 punct ),vector
R13538 T19041 T19018 punct .,transfected

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T18895 103-107 Protein denotes Sox6

testone

Id Subject Object Predicate Lexical cue
T18697 103-107 Protein denotes Sox6
T18696 28-30 Protein denotes ɛy

test3

Id Subject Object Predicate Lexical cue
T18701 103-107 Protein denotes Sox6
T18700 28-30 Protein denotes ɛy
T18699 103-107 Protein denotes Sox6
T18698 28-30 Protein denotes ɛy