PMC:1359074 / 18698-19248
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7857 | 543-549 | NN | denotes | degree |
T7856 | 538-542 | JJ | denotes | same |
T7855 | 534-537 | DT | denotes | the |
T7854 | 531-533 | TO | denotes | to |
T7853 | 527-530 | RB | denotes | not |
T7852 | 523-526 | CC | denotes | but |
T7851 | 521-522 | -COMMA- | denotes | , |
T7850 | 517-521 | NN | denotes | Sox6 |
T7849 | 514-516 | IN | denotes | by |
T7848 | 511-513 | NN | denotes | ɛy |
T7847 | 508-510 | IN | denotes | of |
T7846 | 497-507 | NN | denotes | repression |
T7845 | 489-496 | JJ | denotes | maximal |
T7844 | 485-488 | IN | denotes | for |
T7843 | 476-484 | VB | denotes | required |
T7842 | 472-475 | VB | denotes | are |
T7841 | 466-471 | NN | denotes | sites |
T7840 | 461-465 | DT | denotes | both |
T7839 | 459-460 | -COMMA- | denotes | , |
T7838 | 455-459 | RB | denotes | Thus |
T7837 | 452-453 | -RRB- | denotes | ) |
T7836 | 450-452 | NN | denotes | 3F |
T7835 | 443-449 | NN | denotes | Figure |
T7834 | 442-443 | -LRB- | denotes | ( |
T7833 | 434-441 | NN | denotes | studies |
T7832 | 421-433 | NN | denotes | transfection |
T7831 | 418-420 | IN | denotes | in |
T7830 | 407-417 | NN | denotes | repression |
T7829 | 398-406 | NN | denotes | promoter |
T7828 | 386-397 | JJ | denotes | significant |
T7827 | 383-385 | IN | denotes | in |
T7826 | 376-382 | VB | denotes | result |
T7825 | 372-375 | RB | denotes | not |
T7824 | 369-371 | VB | denotes | do |
T7823 | 367-368 | -RRB- | denotes | ) |
T7822 | 356-367 | VB | denotes | mutagenized |
T7821 | 350-355 | NN | denotes | sites |
T7820 | 342-349 | NN | denotes | binding |
T7819 | 333-341 | NN | denotes | Sox/Sox6 |
T7818 | 328-332 | CC | denotes | both |
T7817 | 325-327 | CC | denotes | or |
T7816 | 321-324 | CD | denotes | one |
T7815 | 314-320 | CC | denotes | either |
T7814 | 309-313 | IN | denotes | with |
T7813 | 308-309 | -LRB- | denotes | ( |
T7812 | 297-307 | NN | denotes | constructs |
T7811 | 288-296 | NN | denotes | reporter |
T7810 | 279-287 | NN | denotes | promoter |
T7809 | 276-278 | JJ | denotes | ɛy |
T7808 | 269-275 | JJ | denotes | mutant |
T7807 | 265-268 | DT | denotes | the |
T7806 | 263-264 | -COMMA- | denotes | , |
T7805 | 256-263 | NN | denotes | results |
T7804 | 251-255 | NN | denotes | EMSA |
T7803 | 247-250 | DT | denotes | the |
T7802 | 242-246 | IN | denotes | with |
T7801 | 231-241 | JJ | denotes | Consistent |
T7800 | 224-229 | NN | denotes | cells |
T7799 | 218-223 | NN | denotes | GM979 |
T7798 | 213-217 | IN | denotes | into |
T7797 | 206-212 | NN | denotes | vector |
T7796 | 191-205 | NN | denotes | overexpression |
T7795 | 186-190 | NN | denotes | Sox6 |
T7794 | 182-185 | DT | denotes | the |
T7793 | 177-181 | IN | denotes | with |
T7792 | 162-176 | VB | denotes | co-transfected |
T7791 | 157-161 | VB | denotes | were |
T7790 | 151-156 | NN | denotes | sites |
T7789 | 143-150 | NN | denotes | binding |
T7788 | 134-142 | NN | denotes | Sox/Sox6 |
T7787 | 122-133 | VB | denotes | mutagenized |
T7786 | 117-121 | IN | denotes | with |
T7785 | 106-116 | NN | denotes | constructs |
T7784 | 97-105 | NN | denotes | reporter |
T7783 | 88-96 | NN | denotes | promoter |
T7782 | 85-87 | JJ | denotes | ɛy |
T7781 | 81-84 | DT | denotes | the |
T7780 | 79-80 | -COMMA- | denotes | , |
T7779 | 74-79 | NN | denotes | sites |
T7778 | 66-73 | NN | denotes | binding |
T7777 | 57-65 | NN | denotes | Sox/Sox6 |
T7776 | 50-56 | JJ | denotes | intact |
T7775 | 46-49 | DT | denotes | the |
T7774 | 43-45 | IN | denotes | of |
T7773 | 30-42 | NN | denotes | significance |
T7772 | 19-29 | JJ | denotes | functional |
T7771 | 15-18 | DT | denotes | the |
T7770 | 3-14 | VB | denotes | investigate |
T7769 | 0-2 | TO | denotes | To |
R5312 | T7770 | T7769 | arg1Of | investigate,To |
R5313 | T7773 | T7770 | arg2Of | significance,investigate |
R5314 | T7773 | T7771 | arg1Of | significance,the |
R5315 | T7773 | T7772 | arg1Of | significance,functional |
R5316 | T7773 | T7774 | arg1Of | significance,of |
R5322 | T7779 | T7774 | arg2Of | sites,of |
R5323 | T7779 | T7775 | arg1Of | sites,the |
R5324 | T7779 | T7776 | arg1Of | sites,intact |
R5325 | T7779 | T7777 | arg1Of | sites,Sox/Sox6 |
R5326 | T7779 | T7778 | arg1Of | sites,binding |
R5330 | T7785 | T7781 | arg1Of | constructs,the |
R5331 | T7785 | T7782 | arg1Of | constructs,ɛy |
R5332 | T7785 | T7783 | arg1Of | constructs,promoter |
R5333 | T7785 | T7784 | arg1Of | constructs,reporter |
R5334 | T7785 | T7786 | arg1Of | constructs,with |
R5335 | T7785 | T7791 | arg1Of | constructs,were |
R5336 | T7785 | T7792 | arg2Of | constructs,co-transfected |
R5337 | T7790 | T7786 | arg2Of | sites,with |
R5338 | T7790 | T7787 | arg2Of | sites,mutagenized |
R5339 | T7790 | T7788 | arg1Of | sites,Sox/Sox6 |
R5340 | T7790 | T7789 | arg1Of | sites,binding |
R5342 | T7792 | T7769 | modOf | co-transfected,To |
R5343 | T7792 | T7780 | arg1Of | co-transfected,"," |
R5344 | T7792 | T7791 | arg2Of | co-transfected,were |
R5345 | T7792 | T7793 | arg1Of | co-transfected,with |
R5348 | T7797 | T7793 | arg2Of | vector,with |
R5349 | T7797 | T7794 | arg1Of | vector,the |
R5350 | T7797 | T7795 | arg1Of | vector,Sox6 |
R5351 | T7797 | T7796 | arg1Of | vector,overexpression |
R5352 | T7797 | T7798 | arg1Of | vector,into |
R5353 | T7800 | T7798 | arg2Of | cells,into |
R5354 | T7800 | T7799 | arg1Of | cells,GM979 |
R5355 | T7801 | T7802 | arg1Of | Consistent,with |
R5358 | T7805 | T7802 | arg2Of | results,with |
R5359 | T7805 | T7803 | arg1Of | results,the |
R5360 | T7805 | T7804 | arg1Of | results,EMSA |
R5364 | T7812 | T7807 | arg1Of | constructs,the |
R5365 | T7812 | T7808 | arg1Of | constructs,mutant |
R5366 | T7812 | T7809 | arg1Of | constructs,ɛy |
R5367 | T7812 | T7810 | arg1Of | constructs,promoter |
R5368 | T7812 | T7811 | arg1Of | constructs,reporter |
R5369 | T7812 | T7813 | arg1Of | constructs,( |
R5370 | T7812 | T7824 | arg1Of | constructs,do |
R5371 | T7812 | T7826 | arg1Of | constructs,result |
R5372 | T7814 | T7813 | arg2Of | with,( |
R5376 | T7821 | T7814 | arg2Of | sites,with |
R5377 | T7821 | T7815 | arg1Of | sites,either |
R5378 | T7821 | T7816 | arg1Of | sites,one |
R5379 | T7821 | T7817 | arg1Of | sites,or |
R5380 | T7821 | T7818 | arg1Of | sites,both |
R5381 | T7821 | T7819 | arg1Of | sites,Sox/Sox6 |
R5382 | T7821 | T7820 | arg1Of | sites,binding |
R5383 | T7821 | T7822 | arg2Of | sites,mutagenized |
R5384 | T7823 | T7813 | arg3Of | ),( |
R5385 | T7826 | T7801 | arg1Of | result,Consistent |
R5386 | T7826 | T7806 | arg1Of | result,"," |
R5387 | T7826 | T7824 | arg2Of | result,do |
R5388 | T7826 | T7825 | arg1Of | result,not |
R5389 | T7826 | T7827 | arg1Of | result,in |
R5390 | T7830 | T7827 | arg2Of | repression,in |
R5395 | T7830 | T7828 | arg1Of | repression,significant |
R5396 | T7830 | T7829 | arg1Of | repression,promoter |
R5397 | T7830 | T7831 | arg1Of | repression,in |
R5398 | T7833 | T7831 | arg2Of | studies,in |
R5399 | T7833 | T7832 | arg1Of | studies,transfection |
R5400 | T7833 | T7834 | arg1Of | studies,( |
R5401 | T7836 | T7834 | arg2Of | 3F,( |
R5402 | T7836 | T7835 | arg1Of | 3F,Figure |
R5408 | T7837 | T7834 | arg3Of | ),( |
R5410 | T7841 | T7840 | arg1Of | sites,both |
R5411 | T7841 | T7842 | arg1Of | sites,are |
R5412 | T7841 | T7843 | arg2Of | sites,required |
R5415 | T7843 | T7838 | arg1Of | required,Thus |
R5416 | T7843 | T7839 | arg1Of | required,"," |
R5417 | T7843 | T7842 | arg2Of | required,are |
R5418 | T7843 | T7844 | arg1Of | required,for |
R5419 | T7843 | T7854 | arg1Of | required,to |
R5420 | T7844 | T7852 | arg1Of | for,but |
R5422 | T7846 | T7844 | arg2Of | repression,for |
R5423 | T7846 | T7845 | arg1Of | repression,maximal |
R5424 | T7846 | T7847 | arg1Of | repression,of |
R5425 | T7846 | T7849 | arg1Of | repression,by |
R5426 | T7848 | T7847 | arg2Of | ɛy,of |
R5427 | T7850 | T7849 | arg2Of | Sox6,by |
R5429 | T7852 | T7851 | arg1Of | but,"," |
R5431 | T7854 | T7852 | arg2Of | to,but |
R5432 | T7854 | T7853 | arg1Of | to,not |
R5434 | T7857 | T7854 | arg2Of | degree,to |
R5435 | T7857 | T7855 | arg1Of | degree,the |
R5436 | T7857 | T7856 | arg1Of | degree,same |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7238 | 333-355 | Antecedent | denotes | Sox/Sox6 binding sites |
T7237 | 461-471 | Anaphor | denotes | both sites |
R4980 | T7237 | T7238 | boundBy | both sites,Sox/Sox6 binding sites |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7265 | 517-521 | Protein | denotes | Sox6 |
T7264 | 511-513 | Protein | denotes | ɛy |
T7263 | 276-278 | Protein | denotes | ɛy |
T7262 | 186-190 | Protein | denotes | Sox6 |
T7261 | 85-87 | Protein | denotes | ɛy |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7984 | 517-521 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
T7983 | 337-341 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
T7982 | 186-190 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
T7981 | 138-142 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
T7980 | 61-65 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7284 | 342-349 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T7283 | 143-150 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T7282 | 66-73 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7299 | 224-229 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7160 | 455-550 | Sentence | denotes | Thus, both sites are required for maximal repression of ɛy by Sox6, but not to the same degree. |
T7159 | 231-454 | Sentence | denotes | Consistent with the EMSA results, the mutant ɛy promoter reporter constructs (with either one or both Sox/Sox6 binding sites mutagenized) do not result in significant promoter repression in transfection studies (Figure 3F). |
T7158 | 0-230 | Sentence | denotes | To investigate the functional significance of the intact Sox/Sox6 binding sites, the ɛy promoter reporter constructs with mutagenized Sox/Sox6 binding sites were co-transfected with the Sox6 overexpression vector into GM979 cells. |
T134 | 0-230 | Sentence | denotes | To investigate the functional significance of the intact Sox/Sox6 binding sites, the ɛy promoter reporter constructs with mutagenized Sox/Sox6 binding sites were co-transfected with the Sox6 overexpression vector into GM979 cells. |
T135 | 231-454 | Sentence | denotes | Consistent with the EMSA results, the mutant ɛy promoter reporter constructs (with either one or both Sox/Sox6 binding sites mutagenized) do not result in significant promoter repression in transfection studies (Figure 3F). |
T136 | 455-550 | Sentence | denotes | Thus, both sites are required for maximal repression of ɛy by Sox6, but not to the same degree. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7423 | 517-521 | Protein | denotes | Sox6 |
T7422 | 511-513 | Protein | denotes | ɛy |
T7421 | 276-278 | Protein | denotes | ɛy |
T7420 | 186-190 | Protein | denotes | Sox6 |
T7419 | 85-87 | Protein | denotes | ɛy |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8906 | 497-507 | Negative_regulation | denotes | repression |
T8905 | 476-484 | Positive_regulation | denotes | required |
T8904 | 191-205 | Gene_expression | denotes | overexpression |
T8885 | 517-521 | Protein | denotes | Sox6 |
T8884 | 511-513 | Protein | denotes | ɛy |
T8883 | 276-278 | Protein | denotes | ɛy |
T8882 | 186-190 | Protein | denotes | Sox6 |
T8881 | 85-87 | Protein | denotes | ɛy |
R6213 | T8882 | T8904 | themeOf | Sox6,overexpression |
R6214 | T8884 | T8906 | themeOf | ɛy,repression |
R6215 | T8885 | T8906 | causeOf | Sox6,repression |
R6225 | T8906 | T8905 | themeOf | repression,required |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8036 | 497-507 | Negative_regulation | denotes | repression |
T8035 | 476-484 | Positive_regulation | denotes | required |
T8034 | 191-205 | Positive_regulation | denotes | overexpression |
T8016 | 517-521 | Protein | denotes | Sox6 |
T8015 | 511-513 | Protein | denotes | ɛy |
T8014 | 276-278 | Protein | denotes | ɛy |
T8013 | 186-190 | Protein | denotes | Sox6 |
T8012 | 85-87 | Protein | denotes | ɛy |
R5545 | T8036 | T8035 | themeOf | repression,required |
R5554 | T8013 | T8034 | themeOf | Sox6,overexpression |
R5556 | T8015 | T8036 | themeOf | ɛy,repression |
R5558 | T8016 | T8036 | causeOf | Sox6,repression |
R5560 | T8016 | T8035 | causeOf | Sox6,required |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8089 | 476-484 | Positive_regulation | denotes | required |
T8088 | 497-507 | Negative_regulation | denotes | repression |
T8087 | 191-205 | Gene_expression | denotes | overexpression |
T8086 | 162-176 | Gene_expression | denotes | co-transfected |
T8065 | 517-521 | Protein | denotes | Sox6 |
T8064 | 511-513 | Protein | denotes | ɛy |
T8063 | 276-278 | Protein | denotes | ɛy |
T8062 | 186-190 | Protein | denotes | Sox6 |
T8061 | 85-87 | Protein | denotes | ɛy |
R5571 | T8061 | T8086 | themeOf | ɛy,co-transfected |
R5574 | T8062 | T8087 | themeOf | Sox6,overexpression |
R5575 | T8062 | T8086 | themeOf | Sox6,co-transfected |
R5576 | T8064 | T8088 | themeOf | ɛy,repression |
R5578 | T8065 | T8088 | themeOf | Sox6,repression |
R5593 | T8088 | T8089 | themeOf | repression,required |
R5599 | T8088 | T8089 | themeOf | repression,required |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8854 | 143-156 | Binding | denotes | binding sites |
T8845 | 328-355 | Entity | denotes | both Sox/Sox6 binding sites |
T8843 | 138-142 | Protein | denotes | Sox6 |
T8836 | 383-453 | Entity | denotes | in significant promoter repression in transfection studies (Figure 3F) |
T8833 | 517-522 | Protein | denotes | Sox6, |
T8831 | 186-190 | Protein | denotes | Sox6 |
T8819 | 57-65 | Protein | denotes | Sox/Sox6 |
T8817 | 143-156 | Entity | denotes | binding sites |
T8813 | 134-142 | Protein | denotes | Sox/Sox6 |
T8810 | 461-471 | Entity | denotes | both sites |
T8809 | 333-341 | Protein | denotes | Sox/Sox6 |
T8791 | 218-229 | Entity | denotes | GM979 cells |
T8790 | 81-142 | Entity | denotes | the ɛy promoter reporter constructs with mutagenized Sox/Sox6 |
T8788 | 134-142 | Protein | denotes | Sox/Sox6 |
T8785 | 265-307 | Entity | denotes | the mutant ɛy promoter reporter constructs |
T8780 | 61-65 | Protein | denotes | Sox6 |
T8779 | 333-341 | Protein | denotes | Sox/Sox6 |
T8773 | 508-513 | Protein | denotes | of ɛy |
T8771 | 276-278 | Protein | denotes | ɛy |
T8768 | 85-87 | Protein | denotes | ɛy |
T8761 | 57-65 | Protein | denotes | Sox/Sox6 |
T8756 | 337-341 | Protein | denotes | Sox6 |
R6188 | T8785 | T8771 | partOf | the mutant ɛy promoter reporter constructs,ɛy |
R6190 | T8817 | T8854 | themeOf | binding sites,binding sites |
R6191 | T8790 | T8768 | partOf | the ɛy promoter reporter constructs with mutagenized Sox/Sox6,ɛy |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8584 | 549-550 | . | denotes | . |
T8583 | 543-549 | NN | denotes | degree |
T8582 | 538-542 | JJ | denotes | same |
T8581 | 534-537 | DT | denotes | the |
T8580 | 531-533 | TO | denotes | to |
T8579 | 527-530 | RB | denotes | not |
T8578 | 523-526 | CC | denotes | but |
T8577 | 521-522 | , | denotes | , |
T8576 | 517-521 | NNP | denotes | Sox6 |
T8575 | 514-516 | IN | denotes | by |
T8574 | 511-513 | NN | denotes | ɛy |
T8573 | 508-510 | IN | denotes | of |
T8572 | 497-507 | NN | denotes | repression |
T8571 | 489-496 | JJ | denotes | maximal |
T8570 | 485-488 | IN | denotes | for |
T8569 | 476-484 | VBN | denotes | required |
T8568 | 472-475 | VBP | denotes | are |
T8567 | 466-471 | NNS | denotes | sites |
T8566 | 461-465 | DT | denotes | both |
T8565 | 459-460 | , | denotes | , |
T8564 | 455-459 | RB | denotes | Thus |
T8563 | 453-454 | . | denotes | . |
T8562 | 452-453 | -RRB- | denotes | ) |
T8561 | 450-452 | CD | denotes | 3F |
T8560 | 443-449 | NN | denotes | Figure |
T8559 | 442-443 | -LRB- | denotes | ( |
T8558 | 434-441 | NNS | denotes | studies |
T8557 | 421-433 | NN | denotes | transfection |
T8556 | 418-420 | IN | denotes | in |
T8555 | 407-417 | NN | denotes | repression |
T8554 | 398-406 | NN | denotes | promoter |
T8553 | 386-397 | JJ | denotes | significant |
T8552 | 383-385 | IN | denotes | in |
T8551 | 376-382 | VB | denotes | result |
T8550 | 372-375 | RB | denotes | not |
T8549 | 369-371 | VBP | denotes | do |
T8548 | 367-368 | -RRB- | denotes | ) |
T8547 | 356-367 | VBN | denotes | mutagenized |
T8546 | 350-355 | NNS | denotes | sites |
T8545 | 342-349 | JJ | denotes | binding |
T8544 | 333-341 | JJ | denotes | Sox/Sox6 |
T8543 | 328-332 | DT | denotes | both |
T8542 | 325-327 | CC | denotes | or |
T8541 | 321-324 | CD | denotes | one |
T8540 | 314-320 | DT | denotes | either |
T8539 | 309-313 | IN | denotes | with |
T8538 | 308-309 | -LRB- | denotes | ( |
T8537 | 297-307 | NNS | denotes | constructs |
T8536 | 288-296 | NN | denotes | reporter |
T8535 | 279-287 | NN | denotes | promoter |
T8534 | 276-278 | NN | denotes | ɛy |
T8533 | 269-275 | JJ | denotes | mutant |
T8532 | 265-268 | DT | denotes | the |
T8531 | 263-264 | , | denotes | , |
T8530 | 256-263 | NNS | denotes | results |
T8529 | 251-255 | NNP | denotes | EMSA |
T8528 | 247-250 | DT | denotes | the |
T8527 | 242-246 | IN | denotes | with |
T8526 | 231-241 | JJ | denotes | Consistent |
T8525 | 229-230 | . | denotes | . |
T8524 | 224-229 | NNS | denotes | cells |
T8523 | 218-223 | NNP | denotes | GM979 |
T8522 | 213-217 | IN | denotes | into |
T8521 | 206-212 | NN | denotes | vector |
T8520 | 191-205 | NN | denotes | overexpression |
T8519 | 186-190 | JJ | denotes | Sox6 |
T8518 | 182-185 | DT | denotes | the |
T8517 | 177-181 | IN | denotes | with |
T8516 | 162-176 | VBN | denotes | co-transfected |
T8515 | 157-161 | VBD | denotes | were |
T8514 | 151-156 | NNS | denotes | sites |
T8513 | 143-150 | JJ | denotes | binding |
T8512 | 134-142 | NNP | denotes | Sox/Sox6 |
T8511 | 122-133 | VBN | denotes | mutagenized |
T8510 | 117-121 | IN | denotes | with |
T8509 | 106-116 | NNS | denotes | constructs |
T8508 | 97-105 | NN | denotes | reporter |
T8507 | 88-96 | NN | denotes | promoter |
T8506 | 85-87 | JJ | denotes | ɛy |
T8505 | 81-84 | DT | denotes | the |
T8504 | 79-80 | , | denotes | , |
T8503 | 74-79 | NNS | denotes | sites |
T8502 | 66-73 | JJ | denotes | binding |
T8501 | 57-65 | NNP | denotes | Sox/Sox6 |
T8500 | 50-56 | JJ | denotes | intact |
T8499 | 46-49 | DT | denotes | the |
T8498 | 43-45 | IN | denotes | of |
T8497 | 30-42 | NN | denotes | significance |
T8496 | 19-29 | JJ | denotes | functional |
T8495 | 15-18 | DT | denotes | the |
T8494 | 3-14 | VB | denotes | investigate |
T8493 | 0-2 | TO | denotes | To |
R5957 | T8493 | T8494 | aux | To,investigate |
R5958 | T8494 | T8516 | advcl | investigate,co-transfected |
R5959 | T8495 | T8497 | det | the,significance |
R5960 | T8496 | T8497 | amod | functional,significance |
R5961 | T8497 | T8494 | dobj | significance,investigate |
R5962 | T8521 | T8517 | pobj | vector,with |
R5963 | T8498 | T8497 | prep | of,significance |
R5964 | T8499 | T8503 | det | the,sites |
R5965 | T8500 | T8503 | amod | intact,sites |
R5966 | T8522 | T8521 | prep | into,vector |
R5967 | T8501 | T8503 | nmod | Sox/Sox6,sites |
R5968 | T8502 | T8503 | amod | binding,sites |
R5969 | T8503 | T8498 | pobj | sites,of |
R5970 | T8523 | T8524 | compound | GM979,cells |
R5971 | T8504 | T8503 | punct | ",",sites |
R5972 | T8505 | T8508 | det | the,reporter |
R5973 | T8506 | T8508 | amod | ɛy,reporter |
R5974 | T8524 | T8522 | pobj | cells,into |
R5975 | T8507 | T8508 | compound | promoter,reporter |
R5976 | T8508 | T8509 | nsubj | reporter,constructs |
R5977 | T8509 | T8494 | dobj | constructs,investigate |
R5978 | T8525 | T8516 | punct | .,co-transfected |
R5979 | T8510 | T8509 | prep | with,constructs |
R5980 | T8511 | T8512 | compound | mutagenized,Sox/Sox6 |
R5981 | T8512 | T8514 | nmod | Sox/Sox6,sites |
R5982 | T8526 | T8537 | advmod | Consistent,constructs |
R5983 | T8513 | T8514 | amod | binding,sites |
R5984 | T8514 | T8510 | pobj | sites,with |
R5985 | T8527 | T8526 | prep | with,Consistent |
R5986 | T8515 | T8516 | auxpass | were,co-transfected |
R5987 | T8528 | T8530 | det | the,results |
R5988 | T8516 | T8516 | ROOT | co-transfected,co-transfected |
R5989 | T8517 | T8516 | prep | with,co-transfected |
R5990 | T8529 | T8530 | compound | EMSA,results |
R5991 | T8518 | T8521 | det | the,vector |
R5992 | T8519 | T8521 | amod | Sox6,vector |
R5993 | T8520 | T8521 | compound | overexpression,vector |
R5994 | T8530 | T8527 | pobj | results,with |
R5995 | T8531 | T8537 | punct | ",",constructs |
R5996 | T8532 | T8536 | det | the,reporter |
R5997 | T8533 | T8536 | amod | mutant,reporter |
R5998 | T8534 | T8536 | compound | ɛy,reporter |
R6000 | T8535 | T8536 | compound | promoter,reporter |
R6003 | T8536 | T8537 | nsubj | reporter,constructs |
R6006 | T8537 | T8551 | nsubj | constructs,result |
R6014 | T8538 | T8539 | punct | (,with |
R6017 | T8539 | T8537 | prep | with,constructs |
R6020 | T8540 | T8541 | det | either,one |
R6023 | T8541 | T8539 | pobj | one,with |
R6027 | T8542 | T8541 | cc | or,one |
R6031 | T8543 | T8546 | det | both,sites |
R6035 | T8544 | T8546 | amod | Sox/Sox6,sites |
R6038 | T8545 | T8546 | amod | binding,sites |
R6043 | T8546 | T8541 | conj | sites,one |
R6046 | T8547 | T8541 | amod | mutagenized,one |
R6050 | T8548 | T8539 | punct | ),with |
R6054 | T8549 | T8551 | aux | do,result |
R6062 | T8550 | T8551 | neg | not,result |
R6065 | T8551 | T8551 | ROOT | result,result |
R6070 | T8552 | T8551 | prep | in,result |
R6071 | T8553 | T8555 | amod | significant,repression |
R6074 | T8554 | T8555 | compound | promoter,repression |
R6078 | T8555 | T8552 | pobj | repression,in |
R6081 | T8556 | T8555 | prep | in,repression |
R6085 | T8557 | T8558 | compound | transfection,studies |
R6089 | T8558 | T8556 | pobj | studies,in |
R6093 | T8559 | T8560 | punct | (,Figure |
R6096 | T8560 | T8558 | appos | Figure,studies |
R6100 | T8561 | T8560 | nummod | 3F,Figure |
R6104 | T8562 | T8560 | punct | ),Figure |
R6107 | T8563 | T8551 | punct | .,result |
R6108 | T8564 | T8569 | advmod | Thus,required |
R6109 | T8565 | T8569 | punct | ",",required |
R6110 | T8566 | T8567 | det | both,sites |
R6111 | T8567 | T8569 | nsubjpass | sites,required |
R6112 | T8568 | T8569 | auxpass | are,required |
R6113 | T8569 | T8569 | ROOT | required,required |
R6114 | T8570 | T8569 | prep | for,required |
R6115 | T8571 | T8572 | amod | maximal,repression |
R6116 | T8572 | T8570 | pobj | repression,for |
R6119 | T8573 | T8572 | prep | of,repression |
R6120 | T8574 | T8573 | pobj | ɛy,of |
R6122 | T8575 | T8569 | agent | by,required |
R6123 | T8576 | T8575 | pobj | Sox6,by |
R6124 | T8577 | T8569 | punct | ",",required |
R6126 | T8578 | T8569 | cc | but,required |
R6127 | T8579 | T8580 | neg | not,to |
R6129 | T8580 | T8569 | xcomp | to,required |
R6131 | T8581 | T8583 | det | the,degree |
R6133 | T8582 | T8583 | amod | same,degree |
R6136 | T8583 | T8580 | pobj | degree,to |
R6139 | T8584 | T8569 | punct | .,required |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7387 | 517-521 | Protein | denotes | Sox6 |
T7386 | 337-341 | Protein | denotes | Sox6 |
T7385 | 333-336 | Protein | denotes | Sox |
T7384 | 269-307 | Protein | denotes | mutant ɛy promoter reporter constructs |
T7383 | 186-190 | Protein | denotes | Sox6 |
T7382 | 138-142 | Protein | denotes | Sox6 |
T7381 | 134-137 | Protein | denotes | Sox |
T7380 | 61-65 | Protein | denotes | Sox6 |
T7379 | 57-60 | Protein | denotes | Sox |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7028 | 517-521 | Protein | denotes | Sox6 |
T7027 | 511-513 | Protein | denotes | ɛy |
T7026 | 276-278 | Protein | denotes | ɛy |
T7025 | 186-190 | Protein | denotes | Sox6 |
T7024 | 85-87 | Protein | denotes | ɛy |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7126 | 517-521 | Protein | denotes | Sox6 |
T7125 | 511-513 | Protein | denotes | ɛy |
T7124 | 276-278 | Protein | denotes | ɛy |
T7123 | 186-190 | Protein | denotes | Sox6 |
T7122 | 85-87 | Protein | denotes | ɛy |
T7084 | 517-521 | Protein | denotes | Sox6 |
T7083 | 511-513 | Protein | denotes | ɛy |
T7082 | 276-278 | Protein | denotes | ɛy |
T7081 | 186-190 | Protein | denotes | Sox6 |
T7080 | 85-87 | Protein | denotes | ɛy |