> top > docs > PMC:1310901 > spans > 625-857 > annotations

PMC:1310901 / 625-857 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T876 44-49 Protein denotes IRF-4
T877 106-116 Regulation denotes regulation
T878 120-125 Protein denotes IRF-4
T879 126-136 Gene_expression denotes expression
R634 T878 T879 themeOf IRF-4,expression
R635 T879 T877 themeOf expression,regulation

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T812 44-49 Protein denotes IRF-4
T813 106-116 Regulation denotes regulation true
T814 120-125 Protein denotes IRF-4
T815 126-136 Gene_expression denotes expression
R601 T814 T815 themeOf IRF-4,expression
R602 T815 T813 themeOf expression,regulation

GO-CC

Id Subject Object Predicate Lexical cue
T699 149-154 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T108 9-155 Sentence denotes Therefore, we investigated whether IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells.
T5 9-155 Sentence denotes Therefore, we investigated whether IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells.

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T227 9-18 RB denotes Therefore
T228 18-19 -COMMA- denotes ,
T229 20-22 PRP denotes we
T230 23-35 VB denotes investigated
T231 36-43 IN denotes whether
T232 44-49 NN denotes IRF-4
T233 50-58 NN denotes promoter
T234 59-70 NN denotes methylation
T235 71-73 CC denotes or
T236 74-82 NN denotes mutation
T237 83-86 MD denotes may
T238 87-89 VB denotes be
T239 90-98 VB denotes involved
T240 99-101 IN denotes in
T241 102-105 DT denotes the
T242 106-116 NN denotes regulation
T243 117-119 IN denotes of
T244 120-125 NN denotes IRF-4
T245 126-136 NN denotes expression
T246 137-139 IN denotes in
T247 140-148 NN denotes leukemia
T248 149-154 NN denotes cells
T249 156-163 IN denotes Whereas
T250 164-172 NN denotes promoter
T251 173-182 NN denotes mutations
T252 183-185 CC denotes or
T253 186-196 JJ denotes structural
T254 197-211 NN denotes rearrangements
T255 212-217 MD denotes could
T256 218-220 VB denotes be
T257 221-229 VB denotes excluded
T258 230-232 IN denotes as
R141 T229 T230 arg1Of we,investigated
R142 T230 T227 arg1Of investigated,Therefore
R143 T230 T228 arg1Of investigated,","
R144 T234 T232 arg1Of methylation,IRF-4
R145 T234 T233 arg1Of methylation,promoter
R146 T234 T235 arg1Of methylation,or
R147 T235 T237 arg1Of or,may
R148 T235 T238 arg1Of or,be
R149 T235 T239 arg2Of or,involved
R150 T236 T235 arg2Of mutation,or
R151 T239 T230 arg2Of involved,investigated
R152 T239 T231 arg1Of involved,whether
R153 T239 T237 arg2Of involved,may
R154 T239 T238 arg2Of involved,be
R155 T239 T240 arg1Of involved,in
R156 T242 T240 arg2Of regulation,in
R157 T242 T241 arg1Of regulation,the
R158 T242 T243 arg1Of regulation,of
R159 T245 T243 arg2Of expression,of
R160 T245 T244 arg1Of expression,IRF-4
R161 T245 T246 arg1Of expression,in
R162 T248 T246 arg2Of cells,in
R163 T248 T247 arg1Of cells,leukemia
R164 T251 T250 arg1Of mutations,promoter
R165 T251 T252 arg1Of mutations,or
R166 T252 T255 arg1Of or,could
R167 T252 T256 arg1Of or,be
R168 T252 T257 arg2Of or,excluded
R169 T254 T252 arg2Of rearrangements,or
R170 T254 T253 arg1Of rearrangements,structural
R171 T257 T249 arg2Of excluded,Whereas
R172 T257 T255 arg2Of excluded,could
R173 T257 T256 arg2Of excluded,be
R174 T257 T258 arg1Of excluded,as

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T519 7-8 . denotes .
T520 9-18 RB denotes Therefore
T521 18-19 , denotes ,
T522 20-22 PRP denotes we
T523 23-35 VBD denotes investigated
T524 36-43 IN denotes whether
T525 44-49 NN denotes IRF-4
T526 50-58 NN denotes promoter
T527 59-70 NN denotes methylation
T528 71-73 CC denotes or
T529 74-82 NN denotes mutation
T530 83-86 MD denotes may
T531 87-89 VB denotes be
T532 90-98 VBN denotes involved
T533 99-101 IN denotes in
T534 102-105 DT denotes the
T535 106-116 NN denotes regulation
T536 117-119 IN denotes of
T537 120-125 NN denotes IRF-4
T538 126-136 NN denotes expression
T539 137-139 IN denotes in
T540 140-148 NN denotes leukemia
T541 149-154 NNS denotes cells
T542 154-155 . denotes .
T543 156-163 IN denotes Whereas
T544 164-172 NN denotes promoter
T545 173-182 NNS denotes mutations
T546 183-185 CC denotes or
T547 186-196 JJ denotes structural
T548 197-211 NNS denotes rearrangements
T549 212-217 MD denotes could
T550 218-220 VB denotes be
T551 221-229 VBN denotes excluded
T552 230-232 IN denotes as
R410 T521 T523 punct ",",investigated
R411 T522 T523 nsubj we,investigated
R412 T523 T523 ROOT investigated,investigated
R413 T524 T532 mark whether,involved
R414 T525 T527 compound IRF-4,methylation
R415 T526 T527 compound promoter,methylation
R416 T527 T532 nsubjpass methylation,involved
R417 T528 T527 cc or,methylation
R418 T529 T527 conj mutation,methylation
R419 T530 T532 aux may,involved
R420 T531 T532 auxpass be,involved
R421 T532 T523 ccomp involved,investigated
R422 T533 T532 prep in,involved
R423 T534 T535 det the,regulation
R424 T535 T533 pobj regulation,in
R425 T536 T535 prep of,regulation
R426 T537 T538 compound IRF-4,expression
R427 T538 T536 pobj expression,of
R428 T539 T535 prep in,regulation
R429 T540 T541 compound leukemia,cells
R430 T541 T539 pobj cells,in
R431 T542 T523 punct .,investigated
R432 T543 T551 mark Whereas,excluded
R433 T544 T545 compound promoter,mutations
R434 T545 T551 nsubjpass mutations,excluded
R435 T546 T545 cc or,mutations
R436 T547 T548 amod structural,rearrangements
R437 T548 T545 conj rearrangements,mutations
R438 T549 T551 aux could,excluded
R439 T550 T551 auxpass be,excluded
R441 T552 T551 prep as,excluded
R409 T520 T523 advmod Therefore,investigated

GO-BP

Id Subject Object Predicate Lexical cue
T115 106-116 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T123 59-70 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T847 44-58 Protein denotes IRF-4 promoter
T848 120-125 Protein denotes IRF-4
T849 126-136 Gene_expression denotes expression
T850 106-116 Regulation denotes regulation
R619 T848 T849 themeOf IRF-4,expression
R620 T849 T850 themeOf expression,regulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T79 44-49 Protein denotes IRF-4
T80 106-116 Regulation denotes regulation true
T81 120-125 Protein denotes IRF-4
T82 126-136 Gene_expression denotes expression
R652 T81 T82 themeOf IRF-4,expression
R653 T82 T80 themeOf expression,regulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T401 44-49 Q15306 denotes IRF-4
T402 120-125 Q15306 denotes IRF-4

test2

Id Subject Object Predicate Lexical cue Negation
T43 44-49 Protein denotes IRF-4
T44 106-116 Regulation denotes regulation true
T45 120-125 Protein denotes IRF-4
T46 126-136 Gene_expression denotes expression
R23 T45 T46 themeOf IRF-4,expression
R24 T46 T44 themeOf expression,regulation