PMC:1208879 / 25700-27583
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7133 | 1403-1409 | NN | denotes | mutant |
T7132 | 1421-1433 | NN | denotes | substitution |
T7131 | 1399-1402 | DT | denotes | the |
T7130 | 1390-1398 | VBZ | denotes | contains |
T7129 | 1384-1389 | WDT | denotes | which |
T7128 | 1382-1384 | , | denotes | , |
T7127 | 1381-1382 | SYM | denotes | ' |
T7126 | 1380-1381 | CD | denotes | 3 |
T7125 | 1379-1380 | HYPH | denotes | - |
T7124 | 1373-1376 | NN | denotes | TTG |
T7123 | 1369-1372 | NN | denotes | GTA |
T7122 | 1365-1368 | NN | denotes | CCA |
T7121 | 1361-1364 | NN | denotes | TGG |
T7120 | 1357-1360 | NN | denotes | TCT |
T7119 | 1353-1356 | NN | denotes | TAA |
T7118 | 1349-1352 | NN | denotes | CCG |
T7117 | 1345-1348 | NN | denotes | TTA |
T7116 | 1341-1344 | NN | denotes | TTT |
T7115 | 1337-1340 | NN | denotes | CGC |
T7114 | 1333-1336 | NN | denotes | GGC |
T7113 | 1329-1332 | NN | denotes | TGC |
T7112 | 1325-1328 | NN | denotes | TTT |
T7111 | 1324-1325 | HYPH | denotes | - |
T7110 | 1323-1324 | SYM | denotes | ' |
T7109 | 1322-1323 | CD | denotes | 5 |
T7108 | 1377-1379 | NN | denotes | AG |
T7107 | 1316-1321 | NN | denotes | ST006 |
T7106 | 1305-1308 | NN | denotes | PCR |
T7105 | 1297-1304 | JJ | denotes | reverse |
T7104 | 1309-1315 | NN | denotes | primer |
T7103 | 1293-1296 | DT | denotes | the |
T7102 | 1287-1292 | VBG | denotes | using |
T7101 | 1283-1286 | CC | denotes | but |
T7100 | 1281-1283 | , | denotes | , |
T7099 | 1264-1271 | NN | denotes | PAX6PST |
T7098 | 1272-1281 | NN | denotes | construct |
T7097 | 1260-1263 | DT | denotes | the |
T7096 | 1257-1259 | IN | denotes | as |
T7095 | 1248-1252 | JJ | denotes | same |
T7094 | 1253-1256 | NN | denotes | way |
T7093 | 1244-1247 | DT | denotes | the |
T7092 | 1241-1243 | IN | denotes | in |
T7091 | 1227-1230 | VBD | denotes | was |
T7090 | 1225-1226 | -RRB- | denotes | ) |
T7089 | 1220-1225 | NN | denotes | Q422R |
T7088 | 1219-1220 | -LRB- | denotes | ( |
T7087 | 1217-1218 | NN | denotes | G |
T7086 | 1216-1217 | SYM | denotes | > |
T7085 | 1211-1216 | NN | denotes | 1627A |
T7084 | 1202-1210 | NN | denotes | mutation |
T7083 | 1198-1201 | DT | denotes | the |
T7082 | 1187-1197 | VBG | denotes | containing |
T7081 | 1231-1240 | VBN | denotes | generated |
T7080 | 1166-1169 | NN | denotes | PST |
T7079 | 1170-1176 | NN | denotes | domain |
T7078 | 1161-1165 | NN | denotes | PAX6 |
T7077 | 1177-1186 | NN | denotes | construct |
T7076 | 1159-1160 | DT | denotes | A |
T7075 | 1158-1447 | sentence | denotes | A PAX6 PST domain construct containing the mutation 1627A>G (Q422R) was generated in the same way as the PAX6PST construct, but using the reverse PCR primer ST006 5'-TTT TGC GGC CGC TTT TTA CCG TAA TCT TGG CCA GTA TTG AG-3', which contains the mutant nucleotide substitution (underlined). |
T7074 | 1157-1158 | . | denotes | . |
T7073 | 1142-1146 | VBN | denotes | been |
T7072 | 1138-1141 | VBD | denotes | had |
T7071 | 1131-1137 | NNS | denotes | errors |
T7070 | 1128-1130 | DT | denotes | no |
T7069 | 1147-1157 | VBN | denotes | introduced |
T7068 | 1123-1127 | IN | denotes | that |
T7067 | 1117-1122 | VB | denotes | check |
T7066 | 1114-1116 | TO | denotes | to |
T7065 | 1099-1103 | VBD | denotes | were |
T7064 | 1091-1098 | NNS | denotes | linkers |
T7063 | 1086-1090 | IN | denotes | with |
T7062 | 1083-1085 | CC | denotes | or |
T7061 | 1079-1082 | NN | denotes | PCR |
T7060 | 1076-1078 | IN | denotes | by |
T7059 | 1066-1075 | VBN | denotes | generated |
T7058 | 1104-1113 | VBN | denotes | sequenced |
T7057 | 1056-1065 | NNS | denotes | fragments |
T7056 | 1052-1055 | DT | denotes | All |
T7055 | 1051-1158 | sentence | denotes | All fragments generated by PCR or with linkers were sequenced to check that no errors had been introduced. |
T7054 | 1050-1051 | . | denotes | . |
T7053 | 1033-1044 | NN | denotes | restriction |
T7052 | 1029-1032 | CD | denotes | two |
T7051 | 1045-1050 | NNS | denotes | sites |
T7050 | 1025-1028 | DT | denotes | the |
T7049 | 1017-1024 | IN | denotes | between |
T7048 | 1000-1009 | JJ | denotes | synthetic |
T7047 | 1010-1016 | NN | denotes | linker |
T7046 | 998-999 | DT | denotes | a |
T7045 | 988-997 | VBG | denotes | inserting |
T7044 | 984-987 | CC | denotes | and |
T7043 | 982-984 | , | denotes | , |
T7042 | 965-966 | HYPH | denotes | - |
T7041 | 966-974 | JJ | denotes | terminal |
T7040 | 964-965 | NN | denotes | C |
T7039 | 975-982 | NN | denotes | peptide |
T7038 | 960-963 | DT | denotes | the |
T7037 | 956-959 | RP | denotes | out |
T7036 | 951-955 | VB | denotes | drop |
T7035 | 948-950 | TO | denotes | to |
T7034 | 943-947 | NN | denotes | NotI |
T7033 | 939-942 | CC | denotes | and |
T7032 | 934-938 | NN | denotes | NdeI |
T7031 | 929-933 | IN | denotes | with |
T7030 | 921-928 | NN | denotes | PAX6PST |
T7029 | 913-920 | VBG | denotes | cutting |
T7028 | 910-912 | IN | denotes | by |
T7027 | 901-904 | VBD | denotes | was |
T7026 | 905-909 | VBN | denotes | made |
T7025 | 896-900 | DT | denotes | This |
T7024 | 895-1051 | sentence | denotes | This was made by cutting PAX6PST with NdeI and NotI to drop out the C-terminal peptide, and inserting a synthetic linker between the two restriction sites. |
T7023 | 894-895 | . | denotes | . |
T7022 | 893-894 | -RRB- | denotes | ) |
T7021 | 890-893 | CD | denotes | 390 |
T7020 | 889-890 | SYM | denotes | – |
T7019 | 886-889 | CD | denotes | 278 |
T7018 | 885-886 | -LRB- | denotes | ( |
T7017 | 867-868 | HYPH | denotes | - |
T7016 | 868-876 | JJ | denotes | terminal |
T7015 | 866-867 | NN | denotes | C |
T7014 | 877-884 | NN | denotes | peptide |
T7013 | 862-865 | DT | denotes | the |
T7012 | 856-861 | CC | denotes | minus |
T7011 | 845-848 | NN | denotes | PST |
T7010 | 849-855 | NN | denotes | domain |
T7009 | 841-844 | DT | denotes | the |
T7008 | 832-840 | VBZ | denotes | contains |
T7007 | 828-829 | HYPH | denotes | - |
T7006 | 829-831 | NN | denotes | CT |
T7005 | 821-828 | NN | denotes | PAX6PST |
T7004 | 820-895 | sentence | denotes | PAX6PST-CT contains the PST domain minus the C-terminal peptide (278–390). |
T7003 | 819-820 | . | denotes | . |
T7002 | 818-819 | -RRB- | denotes | ) |
T7001 | 817-818 | NN | denotes | R |
T7000 | 816-817 | -LRB- | denotes | ( |
T6999 | 810-815 | NN | denotes | ST005 |
T6998 | 806-809 | CC | denotes | and |
T6997 | 804-805 | SYM | denotes | ' |
T6996 | 803-804 | CD | denotes | 3 |
T6995 | 802-803 | HYPH | denotes | - |
T6994 | 796-799 | NN | denotes | TCA |
T6993 | 792-795 | NN | denotes | GAC |
T6992 | 788-791 | NN | denotes | CAG |
T6991 | 784-787 | NN | denotes | CAA |
T6990 | 780-783 | NN | denotes | CTT |
T6989 | 776-779 | NN | denotes | CCA |
T6988 | 772-775 | NN | denotes | CTA |
T6987 | 768-771 | NN | denotes | CGA |
T6986 | 764-767 | NN | denotes | AGT |
T6985 | 760-763 | NN | denotes | AAA |
T6984 | 759-760 | HYPH | denotes | - |
T6983 | 758-759 | SYM | denotes | ' |
T6982 | 757-758 | CD | denotes | 5 |
T6981 | 755-756 | -RRB- | denotes | ) |
T6980 | 754-755 | NN | denotes | F |
T6979 | 753-754 | -LRB- | denotes | ( |
T6978 | 800-802 | NN | denotes | TT |
T6977 | 747-752 | NN | denotes | ST004 |
T6976 | 742-746 | VBD | denotes | were |
T6975 | 734-741 | NNS | denotes | Primers |
T6974 | 733-820 | sentence | denotes | Primers were ST004 (F) 5'-AAA AGT CGA CTA CCA CTT CAA CAG GAC TCA TT-3' and ST005 (R). |
T6973 | 732-733 | . | denotes | . |
T6972 | 731-732 | -RRB- | denotes | ) |
T6971 | 728-731 | CD | denotes | 422 |
T6970 | 727-728 | SYM | denotes | – |
T6969 | 724-727 | CD | denotes | 391 |
T6968 | 723-724 | -LRB- | denotes | ( |
T6967 | 717-722 | JJ | denotes | alone |
T6966 | 699-700 | HYPH | denotes | - |
T6965 | 700-708 | JJ | denotes | terminal |
T6964 | 698-699 | NN | denotes | C |
T6963 | 690-697 | VBN | denotes | defined |
T6962 | 684-689 | RB | denotes | newly |
T6961 | 709-716 | NN | denotes | peptide |
T6960 | 680-683 | DT | denotes | the |
T6959 | 671-679 | VBZ | denotes | contains |
T6958 | 663-670 | NN | denotes | PAX6CTP |
T6957 | 662-733 | sentence | denotes | PAX6CTP contains the newly defined C-terminal peptide alone (391–422). |
T6956 | 661-662 | . | denotes | . |
T6955 | 660-661 | SYM | denotes | ' |
T6954 | 659-660 | CD | denotes | 3 |
T6953 | 658-659 | HYPH | denotes | - |
T6952 | 651-654 | NN | denotes | GTA |
T6951 | 647-650 | NN | denotes | CCA |
T6950 | 643-646 | NN | denotes | TGG |
T6949 | 639-642 | NN | denotes | TCT |
T6948 | 635-638 | NN | denotes | TAA |
T6947 | 631-634 | NN | denotes | CTG |
T6946 | 627-630 | NN | denotes | TTA |
T6945 | 623-626 | NN | denotes | TTT |
T6944 | 619-622 | NN | denotes | GGC |
T6943 | 615-618 | NN | denotes | TGC |
T6942 | 611-614 | NN | denotes | TTT |
T6941 | 610-611 | HYPH | denotes | - |
T6940 | 609-610 | SYM | denotes | ' |
T6939 | 608-609 | CD | denotes | 5 |
T6938 | 606-607 | -RRB- | denotes | ) |
T6937 | 605-606 | NN | denotes | R |
T6936 | 604-605 | -LRB- | denotes | ( |
T6935 | 655-658 | NN | denotes | TTG |
T6934 | 598-603 | NN | denotes | ST005 |
T6933 | 594-597 | CC | denotes | and |
T6932 | 592-593 | SYM | denotes | ' |
T6931 | 591-592 | CD | denotes | 3 |
T6930 | 590-591 | HYPH | denotes | - |
T6928 | 581-584 | NN | denotes | CCT |
T6927 | 577-580 | NN | denotes | ACA |
T6926 | 573-576 | NN | denotes | AAC |
T6925 | 569-572 | NN | denotes | AGC |
T6924 | 565-568 | NN | denotes | GCC |
T6923 | 561-564 | NN | denotes | ACT |
T6922 | 557-560 | NN | denotes | TCG |
T6921 | 553-556 | NN | denotes | AGT |
T6920 | 549-552 | NN | denotes | AAA |
T6919 | 548-549 | HYPH | denotes | - |
T6918 | 547-548 | SYM | denotes | ' |
T6909 | 516-662 | sentence | denotes | Primers were ST001 (forward) 5'-AAA AGT TCG ACT GCC AGC AAC ACA CCT AGT C-3' and ST005 (R) 5'-TTT TGC GGC TTT TTA CTG TAA TCT TGG CCA GTA TTG-3'. |
T6908 | 515-516 | . | denotes | . |
T6907 | 514-515 | -RRB- | denotes | ) |
T6906 | 502-506 | NN | denotes | PAX6 |
T6905 | 494-495 | HYPH | denotes | - |
T6904 | 495-501 | NN | denotes | length |
T6903 | 490-494 | JJ | denotes | full |
T6902 | 507-514 | NN | denotes | protein |
T6901 | 486-489 | DT | denotes | the |
T6900 | 483-485 | IN | denotes | of |
T6899 | 479-482 | CD | denotes | 422 |
T6898 | 478-479 | SYM | denotes | – |
T6897 | 469-474 | NNS | denotes | acids |
T6896 | 463-468 | NN | denotes | amino |
T6895 | 475-478 | CD | denotes | 278 |
T6894 | 462-463 | -LRB- | denotes | ( |
T6893 | 451-454 | NN | denotes | PST |
T6892 | 445-450 | JJ | denotes | whole |
T6891 | 455-461 | NN | denotes | domain |
T6890 | 441-444 | DT | denotes | the |
T6889 | 432-440 | VBZ | denotes | contains |
T6888 | 424-431 | NN | denotes | PAX6PST |
T6887 | 423-516 | sentence | denotes | PAX6PST contains the whole PST domain (amino acids 278–422 of the full-length PAX6 protein). |
T6886 | 422-423 | . | denotes | . |
T6885 | 408-415 | NN | denotes | binding |
T6884 | 404-407 | NN | denotes | DNA |
T6883 | 399-403 | NN | denotes | GAL4 |
T6882 | 393-398 | NN | denotes | yeast |
T6881 | 416-422 | NN | denotes | domain |
T6880 | 389-392 | DT | denotes | the |
T6879 | 386-388 | IN | denotes | to |
T6878 | 380-385 | VBN | denotes | fused |
T6877 | 372-379 | NN | denotes | protein |
T6876 | 370-371 | DT | denotes | a |
T6875 | 360-369 | VBZ | denotes | generates |
T6874 | 354-359 | WDT | denotes | which |
T6873 | 352-354 | , | denotes | , |
T6872 | 351-352 | -RRB- | denotes | ) |
T6871 | 341-351 | NNP | denotes | Invitrogen |
T6870 | 339-341 | , | denotes | , |
T6869 | 325-326 | HYPH | denotes | - |
T6868 | 326-332 | NN | denotes | Hybrid |
T6867 | 322-325 | CD | denotes | Two |
T6866 | 313-321 | NNP | denotes | ProQuest |
T6865 | 333-339 | NN | denotes | System |
T6864 | 312-313 | -LRB- | denotes | ( |
T6863 | 294-304 | NN | denotes | expression |
T6862 | 287-293 | NN | denotes | pDBLeu |
T6861 | 305-311 | NN | denotes | vector |
T6860 | 283-286 | DT | denotes | the |
T6859 | 280-282 | IN | denotes | in |
T6858 | 264-268 | NN | denotes | cDNA |
T6857 | 259-263 | NN | denotes | PAX6 |
T6856 | 269-279 | NNS | denotes | constructs |
T6855 | 253-258 | CD | denotes | three |
T6854 | 248-252 | VB | denotes | make |
T6853 | 245-247 | TO | denotes | to |
T6852 | 235-239 | VBD | denotes | were |
T6851 | 240-244 | VBN | denotes | used |
T6850 | 213-223 | NN | denotes | subcloning |
T6849 | 209-212 | CC | denotes | and |
T6848 | 205-208 | NN | denotes | PCR |
T6847 | 224-234 | NNS | denotes | techniques |
T6846 | 196-204 | JJ | denotes | Standard |
T6845 | 195-423 | sentence | denotes | Standard PCR and subcloning techniques were used to make three PAX6 cDNA constructs in the pDBLeu expression vector (ProQuest Two-Hybrid System, Invitrogen), which generates a protein fused to the yeast GAL4 DNA binding domain. |
T6844 | 194-195 | . | denotes | . |
T6843 | 193-194 | -RRB- | denotes | ] |
T6842 | 191-193 | CD | denotes | 27 |
T6841 | 190-191 | -LRB- | denotes | [ |
T6840 | 181-184 | NN | denotes | web |
T6839 | 164-171 | NN | denotes | Variant |
T6838 | 156-163 | JJ | denotes | Allelic |
T6837 | 172-180 | NN | denotes | Database |
T6836 | 151-155 | NN | denotes | PAX6 |
T6835 | 145-150 | JJ | denotes | Human |
T6834 | 185-189 | NN | denotes | site |
T6833 | 141-144 | DT | denotes | the |
T6832 | 136-140 | IN | denotes | from |
T6831 | 126-135 | JJ | denotes | available |
T6830 | 106-115 | NN | denotes | reference |
T6829 | 98-105 | NN | denotes | protein |
T6828 | 94-97 | CC | denotes | and |
T6827 | 84-88 | NN | denotes | PAX6 |
T6826 | 89-93 | NN | denotes | cDNA |
T6825 | 78-83 | JJ | denotes | human |
T6824 | 116-125 | NNS | denotes | sequences |
T6823 | 74-77 | DT | denotes | the |
T6822 | 71-73 | IN | denotes | on |
T6821 | 65-70 | VBN | denotes | based |
T6820 | 62-64 | VBZ | denotes | is |
T6819 | 47-51 | NN | denotes | acid |
T6818 | 41-46 | NN | denotes | amino |
T6817 | 37-40 | CC | denotes | and |
T6816 | 32-36 | NN | denotes | cDNA |
T6815 | 52-61 | NN | denotes | numbering |
T6814 | 28-31 | DT | denotes | All |
T6813 | 27-195 | sentence | denotes | All cDNA and amino acid numbering is based on the human PAX6 cDNA and protein reference sequences available from the Human PAX6 Allelic Variant Database web site [27]. |
T6812 | 9-10 | HYPH | denotes | - |
T6811 | 10-16 | NN | denotes | hybrid |
T6810 | 6-9 | CD | denotes | two |
T6809 | 17-27 | NNS | denotes | constructs |
T6808 | 0-5 | NN | denotes | Yeast |
T7154 | 1522-1523 | -RRB- | denotes | ) |
T7247 | 1882-1883 | . | denotes | . |
T7246 | 1870-1873 | VBD | denotes | was |
T7245 | 1874-1882 | VBN | denotes | inserted |
T7244 | 1854-1860 | NN | denotes | mutant |
T7243 | 1861-1869 | NN | denotes | sequence |
T7242 | 1850-1853 | DT | denotes | the |
T7241 | 1846-1849 | CC | denotes | and |
T7240 | 1844-1846 | , | denotes | , |
T7239 | 1827-1828 | HYPH | denotes | - |
T7238 | 1828-1836 | JJ | denotes | terminal |
T7237 | 1826-1827 | NN | denotes | C |
T7236 | 1819-1825 | JJ | denotes | normal |
T7235 | 1837-1844 | NN | denotes | peptide |
T7234 | 1815-1818 | DT | denotes | the |
T7233 | 1807-1814 | VB | denotes | release |
T7232 | 1804-1806 | TO | denotes | to |
T7231 | 1799-1803 | NN | denotes | NotI |
T7230 | 1795-1798 | CC | denotes | and |
T7229 | 1790-1794 | NN | denotes | NdeI |
T7228 | 1785-1789 | IN | denotes | with |
T7227 | 1777-1780 | VBD | denotes | was |
T7226 | 1781-1784 | VBN | denotes | cut |
T7225 | 1759-1766 | NN | denotes | PAX6PST |
T7224 | 1767-1776 | NN | denotes | construct |
T7223 | 1755-1758 | DT | denotes | The |
T7222 | 1754-1883 | sentence | denotes | The PAX6PST construct was cut with NdeI and NotI to release the normal C-terminal peptide, and the mutant sequence was inserted. |
T7221 | 1753-1754 | . | denotes | . |
T7220 | 1752-1753 | SYM | denotes | ' |
T7219 | 1751-1752 | CD | denotes | 3 |
T7218 | 1750-1751 | HYPH | denotes | - |
T7217 | 1744-1747 | NN | denotes | TGT |
T7216 | 1740-1743 | NN | denotes | CAT |
T7215 | 1736-1739 | NN | denotes | CTA |
T7214 | 1732-1735 | NN | denotes | AGT |
T7213 | 1728-1731 | NN | denotes | TCC |
T7212 | 1724-1727 | NN | denotes | CCA |
T7211 | 1720-1723 | NN | denotes | CAT |
T7210 | 1716-1719 | NN | denotes | CCG |
T7209 | 1712-1715 | NN | denotes | CGG |
T7208 | 1708-1711 | NN | denotes | TTG |
T7207 | 1707-1708 | HYPH | denotes | - |
T7206 | 1706-1707 | SYM | denotes | ' |
T7205 | 1705-1706 | CD | denotes | 5 |
T7204 | 1703-1704 | -RRB- | denotes | ) |
T7203 | 1702-1703 | NN | denotes | R |
T7202 | 1701-1702 | -LRB- | denotes | ( |
T7201 | 1748-1750 | NN | denotes | TC |
T7200 | 1695-1700 | NN | denotes | ST031 |
T7199 | 1691-1694 | CC | denotes | and |
T7198 | 1689-1690 | SYM | denotes | ' |
T7197 | 1688-1689 | CD | denotes | 3 |
T7196 | 1687-1688 | HYPH | denotes | - |
T7195 | 1682-1685 | NN | denotes | ACA |
T7194 | 1678-1681 | NN | denotes | GAC |
T7193 | 1674-1677 | NN | denotes | GCA |
T7192 | 1670-1673 | NN | denotes | TAT |
T7191 | 1666-1669 | NN | denotes | ACA |
T7190 | 1662-1665 | NN | denotes | CCC |
T7189 | 1661-1662 | HYPH | denotes | - |
T7188 | 1660-1661 | SYM | denotes | ' |
T7187 | 1659-1660 | CD | denotes | 5 |
T7186 | 1657-1658 | -RRB- | denotes | ) |
T7185 | 1656-1657 | NN | denotes | F |
T7184 | 1655-1656 | -LRB- | denotes | ( |
T7183 | 1686-1687 | NN | denotes | C |
T7182 | 1649-1654 | NN | denotes | ST015 |
T7181 | 1644-1648 | VBD | denotes | were |
T7180 | 1636-1643 | NNS | denotes | Primers |
T7179 | 1635-1754 | sentence | denotes | Primers were ST015 (F) 5'-CCC ACA TAT GCA GAC ACA C-3' and ST031 (R) 5'-TTG CGG CCG CAT CCA TCC AGT CTA CAT TGT TC-3'. |
T7178 | 1634-1635 | . | denotes | . |
T7177 | 1633-1634 | -RRB- | denotes | ) |
T7176 | 1620-1623 | NNP | denotes | van |
T7175 | 1618-1619 | NNP | denotes | V |
T7174 | 1624-1633 | NNP | denotes | Heyningen |
T7173 | 1613-1617 | NNP | denotes | Prof |
T7172 | 1609-1612 | CC | denotes | and |
T7171 | 1596-1597 | NNP | denotes | K |
T7170 | 1598-1608 | NNP | denotes | Williamson |
T7169 | 1593-1595 | NNP | denotes | Dr |
T7168 | 1588-1592 | IN | denotes | from |
T7167 | 1581-1582 | DT | denotes | a |
T7166 | 1583-1587 | NN | denotes | gift |
T7165 | 1580-1581 | -LRB- | denotes | ( |
T7164 | 1576-1579 | NN | denotes | RNA |
T7163 | 1564-1575 | VBN | denotes | transcribed |
T7162 | 1556-1563 | JJ | denotes | reverse |
T7161 | 1551-1555 | IN | denotes | from |
T7160 | 1547-1550 | NN | denotes | PCR |
T7159 | 1544-1546 | IN | denotes | by |
T7158 | 1529-1533 | VBD | denotes | were |
T7157 | 1527-1528 | -RRB- | denotes | ] |
T7156 | 1525-1527 | CD | denotes | 12 |
T7155 | 1524-1525 | -LRB- | denotes | [ |
T7153 | 1517-1522 | NN | denotes | X423L |
T7152 | 1516-1517 | -LRB- | denotes | ( |
T7151 | 1507-1515 | NN | denotes | 1629insT |
T7150 | 1503-1506 | CC | denotes | and |
T7149 | 1501-1502 | -RRB- | denotes | ] |
T7148 | 1499-1501 | CD | denotes | 28 |
T7147 | 1498-1499 | -LRB- | denotes | [ |
T7146 | 1488-1497 | NN | denotes | 1615del10 |
T7145 | 1478-1487 | NNS | denotes | mutations |
T7144 | 1474-1477 | DT | denotes | the |
T7143 | 1463-1473 | VBG | denotes | containing |
T7142 | 1534-1543 | VBN | denotes | generated |
T7141 | 1453-1462 | NNS | denotes | sequences |
T7140 | 1448-1452 | NN | denotes | cDNA |
T7139 | 1447-1635 | sentence | denotes | cDNA sequences containing the mutations 1615del10 [28] and 1629insT (X423L) [12] were generated by PCR from reverse transcribed RNA (a gift from Dr K Williamson and Prof V van Heyningen). |
T7138 | 1446-1447 | . | denotes | . |
T7137 | 1445-1446 | -RRB- | denotes | ) |
T7136 | 1435-1445 | JJ | denotes | underlined |
T7135 | 1434-1435 | -LRB- | denotes | ( |
T7134 | 1410-1420 | NN | denotes | nucleotide |
T6917 | 546-547 | CD | denotes | 5 |
T6916 | 544-545 | -RRB- | denotes | ) |
T6915 | 537-544 | JJ | denotes | forward |
T6914 | 536-537 | -LRB- | denotes | ( |
T6913 | 589-590 | NN | denotes | C |
T6912 | 530-535 | NN | denotes | ST001 |
T6911 | 525-529 | VBD | denotes | were |
T6910 | 517-524 | NNS | denotes | Primers |
T6929 | 585-588 | NN | denotes | AGT |
R4202 | T6808 | T6809 | nmod | Yeast,constructs |
R4203 | T6810 | T6811 | nummod | two,hybrid |
R4204 | T6811 | T6809 | compound | hybrid,constructs |
R4205 | T6812 | T6811 | punct | -,hybrid |
R4206 | T6814 | T6815 | det | All,numbering |
R4207 | T6815 | T6820 | nsubj | numbering,is |
R4208 | T6816 | T6815 | nmod | cDNA,numbering |
R4209 | T6817 | T6816 | cc | and,cDNA |
R4210 | T6818 | T6819 | compound | amino,acid |
R4211 | T6819 | T6816 | conj | acid,cDNA |
R4212 | T6821 | T6820 | prep | based,is |
R4213 | T6822 | T6821 | prep | on,based |
R4214 | T6823 | T6824 | det | the,sequences |
R4215 | T6824 | T6822 | pobj | sequences,on |
R4216 | T6825 | T6826 | amod | human,cDNA |
R4217 | T6826 | T6824 | nmod | cDNA,sequences |
R4218 | T6827 | T6826 | nmod | PAX6,cDNA |
R4219 | T6828 | T6826 | cc | and,cDNA |
R4220 | T6829 | T6830 | compound | protein,reference |
R4221 | T6830 | T6826 | conj | reference,cDNA |
R4222 | T6831 | T6824 | amod | available,sequences |
R4223 | T6832 | T6831 | prep | from,available |
R4224 | T6833 | T6834 | det | the,site |
R4225 | T6834 | T6832 | pobj | site,from |
R4226 | T6835 | T6836 | amod | Human,PAX6 |
R4227 | T6836 | T6837 | nmod | PAX6,Database |
R4228 | T6837 | T6834 | compound | Database,site |
R4229 | T6838 | T6839 | amod | Allelic,Variant |
R4230 | T6839 | T6837 | compound | Variant,Database |
R4231 | T6840 | T6834 | compound | web,site |
R4232 | T6841 | T6842 | punct | [,27 |
R4233 | T6842 | T6821 | parataxis | 27,based |
R4234 | T6843 | T6842 | punct | ],27 |
R4235 | T6844 | T6820 | punct | .,is |
R4236 | T6846 | T6847 | amod | Standard,techniques |
R4237 | T6847 | T6851 | nsubjpass | techniques,used |
R4238 | T6848 | T6847 | nmod | PCR,techniques |
R4239 | T6849 | T6848 | cc | and,PCR |
R4240 | T6850 | T6848 | conj | subcloning,PCR |
R4241 | T6852 | T6851 | auxpass | were,used |
R4242 | T6853 | T6854 | aux | to,make |
R4243 | T6854 | T6851 | advcl | make,used |
R4244 | T6855 | T6856 | nummod | three,constructs |
R4245 | T6856 | T6854 | dobj | constructs,make |
R4246 | T6857 | T6858 | compound | PAX6,cDNA |
R4247 | T6858 | T6856 | compound | cDNA,constructs |
R4248 | T6859 | T6854 | prep | in,make |
R4249 | T6860 | T6861 | det | the,vector |
R4250 | T6861 | T6859 | pobj | vector,in |
R4251 | T6862 | T6861 | compound | pDBLeu,vector |
R4252 | T6863 | T6861 | compound | expression,vector |
R4253 | T6864 | T6865 | punct | (,System |
R4254 | T6865 | T6861 | parataxis | System,vector |
R4255 | T6866 | T6865 | nmod | ProQuest,System |
R4256 | T6867 | T6868 | nummod | Two,Hybrid |
R4257 | T6868 | T6865 | compound | Hybrid,System |
R4258 | T6869 | T6868 | punct | -,Hybrid |
R4259 | T6870 | T6865 | punct | ", ",System |
R4260 | T6871 | T6865 | npadvmod | Invitrogen,System |
R4261 | T6872 | T6865 | punct | ),System |
R4262 | T6873 | T6861 | punct | ", ",vector |
R4263 | T6874 | T6875 | dep | which,generates |
R4264 | T6875 | T6861 | relcl | generates,vector |
R4265 | T6876 | T6877 | det | a,protein |
R4266 | T6877 | T6875 | dobj | protein,generates |
R4267 | T6878 | T6877 | acl | fused,protein |
R4268 | T6879 | T6878 | prep | to,fused |
R4269 | T6880 | T6881 | det | the,domain |
R4270 | T6881 | T6879 | pobj | domain,to |
R4271 | T6882 | T6881 | compound | yeast,domain |
R4272 | T6883 | T6881 | compound | GAL4,domain |
R4273 | T6884 | T6885 | compound | DNA,binding |
R4274 | T6885 | T6881 | compound | binding,domain |
R4275 | T6886 | T6851 | punct | .,used |
R4276 | T6888 | T6889 | nsubj | PAX6PST,contains |
R4277 | T6890 | T6891 | det | the,domain |
R4278 | T6891 | T6889 | dobj | domain,contains |
R4279 | T6892 | T6891 | amod | whole,domain |
R4280 | T6893 | T6891 | compound | PST,domain |
R4281 | T6894 | T6895 | punct | (,278 |
R4282 | T6895 | T6889 | parataxis | 278,contains |
R4283 | T6896 | T6895 | nmod | amino,278 |
R4284 | T6897 | T6895 | nmod | acids,278 |
R4285 | T6898 | T6899 | punct | –,422 |
R4286 | T6899 | T6895 | prep | 422,278 |
R4287 | T6900 | T6895 | prep | of,278 |
R4288 | T6901 | T6902 | det | the,protein |
R4289 | T6902 | T6900 | pobj | protein,of |
R4290 | T6903 | T6904 | amod | full,length |
R4291 | T6904 | T6902 | compound | length,protein |
R4292 | T6905 | T6904 | punct | -,length |
R4293 | T6906 | T6902 | compound | PAX6,protein |
R4294 | T6907 | T6895 | punct | ),278 |
R4295 | T6908 | T6889 | punct | .,contains |
R4296 | T6910 | T6911 | nsubj | Primers,were |
R4297 | T6912 | T6913 | nmod | ST001,C |
R4298 | T6913 | T6911 | attr | C,were |
R4299 | T6914 | T6915 | punct | (,forward |
R4300 | T6915 | T6913 | parataxis | forward,C |
R4301 | T6916 | T6915 | punct | ),forward |
R4302 | T6917 | T6913 | nummod | 5,C |
R4303 | T6918 | T6917 | punct | ',5 |
R4304 | T6919 | T6913 | punct | -,C |
R4305 | T6920 | T6913 | compound | AAA,C |
R4306 | T6921 | T6913 | compound | AGT,C |
R4307 | T6922 | T6913 | compound | TCG,C |
R4308 | T6923 | T6913 | compound | ACT,C |
R4309 | T6924 | T6913 | compound | GCC,C |
R4310 | T6925 | T6913 | compound | AGC,C |
R4311 | T6926 | T6913 | compound | AAC,C |
R4312 | T6927 | T6913 | compound | ACA,C |
R4313 | T6928 | T6913 | compound | CCT,C |
R4314 | T6929 | T6913 | compound | AGT,C |
R4315 | T6930 | T6913 | punct | -,C |
R4316 | T6931 | T6913 | nummod | 3,C |
R4317 | T6932 | T6913 | punct | ',C |
R4318 | T6933 | T6913 | cc | and,C |
R4319 | T6934 | T6935 | nmod | ST005,TTG |
R4320 | T6935 | T6913 | conj | TTG,C |
R4321 | T6936 | T6937 | punct | (,R |
R4322 | T6937 | T6935 | parataxis | R,TTG |
R4323 | T6938 | T6937 | punct | ),R |
R4324 | T6939 | T6935 | nummod | 5,TTG |
R4325 | T6940 | T6939 | punct | ',5 |
R4326 | T6941 | T6935 | punct | -,TTG |
R4327 | T6942 | T6935 | compound | TTT,TTG |
R4328 | T6943 | T6935 | compound | TGC,TTG |
R4329 | T6944 | T6935 | compound | GGC,TTG |
R4330 | T6945 | T6935 | compound | TTT,TTG |
R4331 | T6946 | T6935 | compound | TTA,TTG |
R4332 | T6947 | T6935 | compound | CTG,TTG |
R4333 | T6948 | T6935 | compound | TAA,TTG |
R4334 | T6949 | T6935 | compound | TCT,TTG |
R4335 | T6950 | T6935 | compound | TGG,TTG |
R4336 | T6951 | T6935 | compound | CCA,TTG |
R4337 | T6952 | T6935 | compound | GTA,TTG |
R4338 | T6953 | T6935 | punct | -,TTG |
R4339 | T6954 | T6935 | nummod | 3,TTG |
R4340 | T6955 | T6935 | punct | ',TTG |
R4341 | T6956 | T6911 | punct | .,were |
R4342 | T6958 | T6959 | nsubj | PAX6CTP,contains |
R4343 | T6960 | T6961 | det | the,peptide |
R4344 | T6961 | T6959 | dobj | peptide,contains |
R4345 | T6962 | T6963 | advmod | newly,defined |
R4346 | T6963 | T6961 | amod | defined,peptide |
R4347 | T6964 | T6965 | npadvmod | C,terminal |
R4348 | T6965 | T6961 | amod | terminal,peptide |
R4349 | T6966 | T6965 | punct | -,terminal |
R4350 | T6967 | T6961 | amod | alone,peptide |
R4351 | T6968 | T6969 | punct | (,391 |
R4352 | T6969 | T6959 | parataxis | 391,contains |
R4353 | T6970 | T6971 | punct | –,422 |
R4354 | T6971 | T6969 | prep | 422,391 |
R4355 | T6972 | T6969 | punct | ),391 |
R4356 | T6973 | T6959 | punct | .,contains |
R4357 | T6975 | T6976 | nsubj | Primers,were |
R4358 | T6977 | T6978 | nmod | ST004,TT |
R4359 | T6978 | T6976 | attr | TT,were |
R4360 | T6979 | T6980 | punct | (,F |
R4361 | T6980 | T6978 | parataxis | F,TT |
R4362 | T6981 | T6980 | punct | ),F |
R4363 | T6982 | T6978 | nummod | 5,TT |
R4364 | T6983 | T6982 | punct | ',5 |
R4365 | T6984 | T6978 | punct | -,TT |
R4366 | T6985 | T6978 | compound | AAA,TT |
R4367 | T6986 | T6978 | compound | AGT,TT |
R4368 | T6987 | T6978 | compound | CGA,TT |
R4369 | T6988 | T6978 | compound | CTA,TT |
R4370 | T6989 | T6978 | compound | CCA,TT |
R4371 | T6990 | T6978 | compound | CTT,TT |
R4372 | T6991 | T6978 | compound | CAA,TT |
R4373 | T6992 | T6978 | compound | CAG,TT |
R4374 | T6993 | T6978 | compound | GAC,TT |
R4375 | T6994 | T6978 | compound | TCA,TT |
R4376 | T6995 | T6978 | punct | -,TT |
R4377 | T6996 | T6978 | nummod | 3,TT |
R4378 | T6997 | T6978 | punct | ',TT |
R4379 | T6998 | T6978 | cc | and,TT |
R4380 | T6999 | T6978 | conj | ST005,TT |
R4381 | T7000 | T7001 | punct | (,R |
R4382 | T7001 | T6999 | parataxis | R,ST005 |
R4383 | T7002 | T7001 | punct | ),R |
R4384 | T7003 | T6976 | punct | .,were |
R4385 | T7005 | T7006 | compound | PAX6PST,CT |
R4386 | T7006 | T7008 | nsubj | CT,contains |
R4387 | T7007 | T7006 | punct | -,CT |
R4388 | T7009 | T7010 | det | the,domain |
R4389 | T7010 | T7008 | dobj | domain,contains |
R4390 | T7011 | T7010 | compound | PST,domain |
R4391 | T7012 | T7010 | cc | minus,domain |
R4392 | T7013 | T7014 | det | the,peptide |
R4393 | T7014 | T7010 | conj | peptide,domain |
R4394 | T7015 | T7016 | npadvmod | C,terminal |
R4395 | T7016 | T7014 | amod | terminal,peptide |
R4396 | T7017 | T7016 | punct | -,terminal |
R4397 | T7018 | T7019 | punct | (,278 |
R4398 | T7019 | T7008 | parataxis | 278,contains |
R4399 | T7020 | T7021 | punct | –,390 |
R4400 | T7021 | T7019 | prep | 390,278 |
R4401 | T7022 | T7019 | punct | ),278 |
R4402 | T7023 | T7008 | punct | .,contains |
R4403 | T7025 | T7026 | nsubjpass | This,made |
R4404 | T7027 | T7026 | auxpass | was,made |
R4405 | T7028 | T7026 | prep | by,made |
R4406 | T7029 | T7028 | pcomp | cutting,by |
R4407 | T7030 | T7029 | dobj | PAX6PST,cutting |
R4408 | T7031 | T7029 | prep | with,cutting |
R4409 | T7032 | T7031 | pobj | NdeI,with |
R4410 | T7033 | T7032 | cc | and,NdeI |
R4411 | T7034 | T7032 | conj | NotI,NdeI |
R4412 | T7035 | T7036 | aux | to,drop |
R4413 | T7036 | T7029 | advcl | drop,cutting |
R4414 | T7037 | T7036 | prt | out,drop |
R4415 | T7038 | T7039 | det | the,peptide |
R4416 | T7039 | T7036 | dobj | peptide,drop |
R4417 | T7040 | T7041 | npadvmod | C,terminal |
R4418 | T7041 | T7039 | amod | terminal,peptide |
R4419 | T7042 | T7041 | punct | -,terminal |
R4420 | T7043 | T7029 | punct | ", ",cutting |
R4421 | T7044 | T7029 | cc | and,cutting |
R4422 | T7045 | T7029 | conj | inserting,cutting |
R4423 | T7046 | T7047 | det | a,linker |
R4424 | T7047 | T7045 | dobj | linker,inserting |
R4425 | T7048 | T7047 | amod | synthetic,linker |
R4426 | T7049 | T7047 | prep | between,linker |
R4427 | T7050 | T7051 | det | the,sites |
R4428 | T7051 | T7049 | pobj | sites,between |
R4429 | T7052 | T7051 | nummod | two,sites |
R4430 | T7053 | T7051 | compound | restriction,sites |
R4431 | T7054 | T7026 | punct | .,made |
R4432 | T7056 | T7057 | det | All,fragments |
R4433 | T7057 | T7058 | nsubjpass | fragments,sequenced |
R4434 | T7059 | T7057 | acl | generated,fragments |
R4435 | T7060 | T7059 | prep | by,generated |
R4436 | T7061 | T7060 | pobj | PCR,by |
R4437 | T7062 | T7060 | cc | or,by |
R4438 | T7063 | T7060 | conj | with,by |
R4439 | T7064 | T7063 | pobj | linkers,with |
R4440 | T7065 | T7058 | auxpass | were,sequenced |
R4441 | T7066 | T7067 | aux | to,check |
R4442 | T7067 | T7058 | advcl | check,sequenced |
R4443 | T7068 | T7069 | mark | that,introduced |
R4444 | T7069 | T7067 | ccomp | introduced,check |
R4445 | T7070 | T7071 | det | no,errors |
R4446 | T7071 | T7069 | nsubjpass | errors,introduced |
R4447 | T7072 | T7069 | aux | had,introduced |
R4448 | T7073 | T7069 | auxpass | been,introduced |
R4449 | T7074 | T7058 | punct | .,sequenced |
R4450 | T7076 | T7077 | det | A,construct |
R4451 | T7077 | T7081 | nsubjpass | construct,generated |
R4452 | T7078 | T7079 | compound | PAX6,domain |
R4453 | T7079 | T7077 | compound | domain,construct |
R4454 | T7080 | T7079 | compound | PST,domain |
R4455 | T7082 | T7077 | acl | containing,construct |
R4456 | T7083 | T7084 | det | the,mutation |
R4457 | T7084 | T7082 | dobj | mutation,containing |
R4458 | T7085 | T7084 | appos | 1627A,mutation |
R4459 | T7086 | T7087 | punct | >,G |
R4460 | T7087 | T7085 | prep | G,1627A |
R4461 | T7088 | T7084 | punct | (,mutation |
R4462 | T7089 | T7084 | appos | Q422R,mutation |
R4463 | T7090 | T7084 | punct | ),mutation |
R4464 | T7091 | T7081 | auxpass | was,generated |
R4465 | T7092 | T7081 | prep | in,generated |
R4466 | T7093 | T7094 | det | the,way |
R4467 | T7094 | T7092 | pobj | way,in |
R4468 | T7095 | T7094 | amod | same,way |
R4469 | T7096 | T7094 | prep | as,way |
R4470 | T7097 | T7098 | det | the,construct |
R4471 | T7098 | T7096 | pobj | construct,as |
R4472 | T7099 | T7098 | compound | PAX6PST,construct |
R4473 | T7100 | T7092 | punct | ", ",in |
R4474 | T7101 | T7092 | cc | but,in |
R4475 | T7102 | T7092 | conj | using,in |
R4476 | T7103 | T7104 | det | the,primer |
R4477 | T7104 | T7102 | dobj | primer,using |
R4478 | T7105 | T7104 | amod | reverse,primer |
R4479 | T7106 | T7104 | compound | PCR,primer |
R4480 | T7107 | T7108 | nmod | ST006,AG |
R4481 | T7108 | T7104 | appos | AG,primer |
R4482 | T7109 | T7108 | nummod | 5,AG |
R4483 | T7110 | T7109 | punct | ',5 |
R4484 | T7111 | T7108 | punct | -,AG |
R4485 | T7112 | T7108 | compound | TTT,AG |
R4486 | T7113 | T7108 | compound | TGC,AG |
R4487 | T7114 | T7108 | compound | GGC,AG |
R4488 | T7115 | T7108 | compound | CGC,AG |
R4489 | T7116 | T7108 | compound | TTT,AG |
R4490 | T7117 | T7108 | compound | TTA,AG |
R4491 | T7118 | T7108 | compound | CCG,AG |
R4492 | T7119 | T7108 | compound | TAA,AG |
R4493 | T7120 | T7108 | compound | TCT,AG |
R4494 | T7121 | T7108 | compound | TGG,AG |
R4495 | T7122 | T7108 | compound | CCA,AG |
R4496 | T7123 | T7108 | compound | GTA,AG |
R4497 | T7124 | T7108 | compound | TTG,AG |
R4498 | T7125 | T7108 | punct | -,AG |
R4499 | T7126 | T7108 | nummod | 3,AG |
R4500 | T7127 | T7108 | punct | ',AG |
R4501 | T7128 | T7104 | punct | ", ",primer |
R4502 | T7129 | T7130 | dep | which,contains |
R4503 | T7130 | T7104 | relcl | contains,primer |
R4504 | T7131 | T7132 | det | the,substitution |
R4505 | T7132 | T7130 | dobj | substitution,contains |
R4506 | T7133 | T7132 | compound | mutant,substitution |
R4507 | T7134 | T7132 | compound | nucleotide,substitution |
R4508 | T7135 | T7136 | punct | (,underlined |
R4509 | T7136 | T7104 | parataxis | underlined,primer |
R4510 | T7137 | T7136 | punct | ),underlined |
R4511 | T7138 | T7081 | punct | .,generated |
R4512 | T7140 | T7141 | compound | cDNA,sequences |
R4513 | T7141 | T7142 | nsubjpass | sequences,generated |
R4514 | T7143 | T7141 | acl | containing,sequences |
R4515 | T7144 | T7145 | det | the,mutations |
R4516 | T7145 | T7143 | dobj | mutations,containing |
R4517 | T7146 | T7145 | appos | 1615del10,mutations |
R4518 | T7147 | T7148 | punct | [,28 |
R4519 | T7148 | T7146 | parataxis | 28,1615del10 |
R4520 | T7149 | T7148 | punct | ],28 |
R4521 | T7150 | T7146 | cc | and,1615del10 |
R4522 | T7151 | T7146 | conj | 1629insT,1615del10 |
R4523 | T7152 | T7151 | punct | (,1629insT |
R4524 | T7153 | T7151 | appos | X423L,1629insT |
R4525 | T7154 | T7151 | punct | ),1629insT |
R4526 | T7155 | T7156 | punct | [,12 |
R4527 | T7156 | T7151 | parataxis | 12,1629insT |
R4528 | T7157 | T7156 | punct | ],12 |
R4529 | T7158 | T7142 | auxpass | were,generated |
R4530 | T7159 | T7142 | prep | by,generated |
R4531 | T7160 | T7159 | pobj | PCR,by |
R4532 | T7161 | T7160 | prep | from,PCR |
R4533 | T7162 | T7163 | amod | reverse,transcribed |
R4534 | T7163 | T7164 | amod | transcribed,RNA |
R4535 | T7164 | T7161 | pobj | RNA,from |
R4536 | T7165 | T7166 | punct | (,gift |
R4537 | T7166 | T7164 | parataxis | gift,RNA |
R4538 | T7167 | T7166 | det | a,gift |
R4539 | T7168 | T7166 | prep | from,gift |
R4540 | T7169 | T7170 | compound | Dr,Williamson |
R4541 | T7170 | T7168 | pobj | Williamson,from |
R4542 | T7171 | T7170 | compound | K,Williamson |
R4543 | T7172 | T7170 | cc | and,Williamson |
R4544 | T7173 | T7174 | compound | Prof,Heyningen |
R4545 | T7174 | T7170 | conj | Heyningen,Williamson |
R4546 | T7175 | T7174 | compound | V,Heyningen |
R4547 | T7176 | T7174 | compound | van,Heyningen |
R4548 | T7177 | T7166 | punct | ),gift |
R4549 | T7178 | T7142 | punct | .,generated |
R4550 | T7180 | T7181 | nsubj | Primers,were |
R4551 | T7182 | T7183 | nmod | ST015,C |
R4552 | T7183 | T7181 | attr | C,were |
R4553 | T7184 | T7185 | punct | (,F |
R4554 | T7185 | T7183 | parataxis | F,C |
R4555 | T7186 | T7185 | punct | ),F |
R4556 | T7187 | T7183 | nummod | 5,C |
R4557 | T7188 | T7187 | punct | ',5 |
R4558 | T7189 | T7183 | punct | -,C |
R4559 | T7190 | T7183 | compound | CCC,C |
R4560 | T7191 | T7183 | compound | ACA,C |
R4561 | T7192 | T7183 | compound | TAT,C |
R4562 | T7193 | T7183 | compound | GCA,C |
R4563 | T7194 | T7183 | compound | GAC,C |
R4564 | T7195 | T7183 | compound | ACA,C |
R4565 | T7196 | T7183 | punct | -,C |
R4566 | T7197 | T7183 | nummod | 3,C |
R4567 | T7198 | T7183 | punct | ',C |
R4568 | T7199 | T7183 | cc | and,C |
R4569 | T7200 | T7201 | nmod | ST031,TC |
R4570 | T7201 | T7183 | conj | TC,C |
R4571 | T7202 | T7203 | punct | (,R |
R4572 | T7203 | T7201 | parataxis | R,TC |
R4573 | T7204 | T7203 | punct | ),R |
R4574 | T7205 | T7201 | nummod | 5,TC |
R4575 | T7206 | T7205 | punct | ',5 |
R4576 | T7207 | T7201 | punct | -,TC |
R4577 | T7208 | T7201 | compound | TTG,TC |
R4578 | T7209 | T7201 | compound | CGG,TC |
R4579 | T7210 | T7201 | compound | CCG,TC |
R4580 | T7211 | T7201 | compound | CAT,TC |
R4581 | T7212 | T7201 | compound | CCA,TC |
R4582 | T7213 | T7201 | compound | TCC,TC |
R4583 | T7214 | T7201 | compound | AGT,TC |
R4584 | T7215 | T7201 | compound | CTA,TC |
R4585 | T7216 | T7201 | compound | CAT,TC |
R4586 | T7217 | T7201 | compound | TGT,TC |
R4587 | T7218 | T7201 | punct | -,TC |
R4588 | T7219 | T7201 | nummod | 3,TC |
R4589 | T7220 | T7201 | punct | ',TC |
R4590 | T7221 | T7181 | punct | .,were |
R4591 | T7223 | T7224 | det | The,construct |
R4592 | T7224 | T7226 | nsubjpass | construct,cut |
R4593 | T7225 | T7224 | compound | PAX6PST,construct |
R4594 | T7227 | T7226 | auxpass | was,cut |
R4595 | T7228 | T7226 | prep | with,cut |
R4596 | T7229 | T7228 | pobj | NdeI,with |
R4597 | T7230 | T7229 | cc | and,NdeI |
R4598 | T7231 | T7229 | conj | NotI,NdeI |
R4599 | T7232 | T7233 | aux | to,release |
R4600 | T7233 | T7226 | advcl | release,cut |
R4601 | T7234 | T7235 | det | the,peptide |
R4602 | T7235 | T7233 | dobj | peptide,release |
R4603 | T7236 | T7235 | amod | normal,peptide |
R4604 | T7237 | T7238 | npadvmod | C,terminal |
R4605 | T7238 | T7235 | amod | terminal,peptide |
R4606 | T7239 | T7238 | punct | -,terminal |
R4607 | T7240 | T7226 | punct | ", ",cut |
R4608 | T7241 | T7226 | cc | and,cut |
R4609 | T7242 | T7243 | det | the,sequence |
R4610 | T7243 | T7245 | nsubjpass | sequence,inserted |
R4611 | T7244 | T7243 | compound | mutant,sequence |
R4612 | T7245 | T7226 | conj | inserted,cut |
R4613 | T7246 | T7245 | auxpass | was,inserted |
R4614 | T7247 | T7245 | punct | .,inserted |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6807 | 1874-1882 | SO_EXT:sequence_insertion_process | denotes | inserted |
T6806 | 1861-1869 | SO_EXT:biological_sequence | denotes | sequence |
T6805 | 1854-1860 | SO_EXT:sequence_altered_entity_or_alteration_process | denotes | mutant |
T6804 | 1837-1844 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
T6803 | 1826-1836 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
T6802 | 1807-1814 | GO_EXT:biological_release | denotes | release |
T6801 | 1781-1784 | MOP:0000780 | denotes | cut |
T6800 | 1767-1776 | SO_EXT:engineered_biological_sequence | denotes | construct |
T6799 | 1702-1703 | SO:0001031 | denotes | R |
T6798 | 1656-1657 | SO:0001030 | denotes | F |
T6797 | 1636-1643 | SO_EXT:0000112 | denotes | Primers |
T6796 | 1576-1579 | CHEBI_SO_EXT:RNA | denotes | RNA |
T6795 | 1556-1575 | GO:0001171 | denotes | reverse transcribed |
T6794 | 1478-1487 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
T6793 | 1453-1462 | SO_EXT:biological_sequence | denotes | sequences |
T6792 | 1448-1452 | SO_EXT:cDNA | denotes | cDNA |
T6791 | 1421-1433 | SO_EXT:sequence_substitution_entity_or_process | denotes | substitution |
T6790 | 1410-1420 | CHEBI_SO_EXT:nucleotide | denotes | nucleotide |
T6789 | 1403-1409 | SO_EXT:sequence_altered_entity_or_alteration_process | denotes | mutant |
T6788 | 1309-1315 | SO_EXT:0000132 | denotes | primer |
T6787 | 1297-1304 | _FRAGMENT | denotes | reverse |
T6786 | 1272-1281 | SO_EXT:engineered_biological_sequence | denotes | construct |
T6785 | 1217-1218 | CHEBI_EXT:guanine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group | denotes | G |
T6784 | 1202-1210 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutation |
T6783 | 1177-1186 | SO_EXT:engineered_biological_sequence | denotes | construct |
T6782 | 1170-1176 | SO_EXT:0000417 | denotes | domain |
T6781 | 1161-1165 | PR_EXT:000012318 | denotes | PAX6 |
T6780 | 1033-1050 | SO_EXT:0000061 | denotes | restriction sites |
T6779 | 988-997 | SO_EXT:sequence_insertion_process | denotes | inserting |
T6778 | 975-982 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
T6777 | 964-974 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
T6776 | 913-920 | MOP:0000780 | denotes | cutting |
T6775 | 877-884 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
T6774 | 866-876 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
T6773 | 849-855 | SO_EXT:0000417 | denotes | domain |
T6772 | 817-818 | SO:0001031 | denotes | R |
T6771 | 754-755 | SO:0001030 | denotes | F |
T6770 | 734-741 | SO_EXT:0000112 | denotes | Primers |
T6769 | 709-716 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
T6768 | 698-708 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
T6767 | 605-606 | SO:0001031 | denotes | R |
T6766 | 537-544 | SO:0001030 | denotes | forward |
T6765 | 517-524 | SO_EXT:0000112 | denotes | Primers |
T6764 | 507-514 | CHEBI_PR_EXT:protein | denotes | protein |
T6763 | 502-506 | PR_EXT:000012318 | denotes | PAX6 |
T6762 | 463-474 | CHEBI_SO_EXT:amino_acid | denotes | amino acids |
T6761 | 455-461 | SO_EXT:0000417 | denotes | domain |
T6760 | 416-422 | SO_EXT:0000417 | denotes | domain |
T6759 | 408-415 | CHEMINF_GO_EXT:chemical_binding_or_bond_formation | denotes | binding |
T6758 | 404-407 | CHEBI_SO_EXT:DNA | denotes | DNA |
T6757 | 399-403 | PR_EXT:P04386 | denotes | GAL4 |
T6756 | 393-398 | NCBITaxon_EXT:yeast | denotes | yeast |
T6755 | 380-385 | SO_EXT:sequence_fusion_process | denotes | fused |
T6754 | 372-379 | CHEBI_PR_EXT:protein | denotes | protein |
T6753 | 305-311 | SO_EXT:0000440 | denotes | vector |
T6752 | 294-304 | GO:0010467 | denotes | expression |
T6751 | 269-279 | SO_EXT:engineered_biological_sequence | denotes | constructs |
T6750 | 264-268 | SO_EXT:cDNA | denotes | cDNA |
T6749 | 259-263 | PR_EXT:000012318 | denotes | PAX6 |
T6748 | 164-171 | SO_EXT:sequence_variant_or_variation | denotes | Variant |
T6747 | 156-163 | SO_EXT:0001023 | denotes | Allelic |
T6746 | 151-155 | PR_EXT:000012318 | denotes | PAX6 |
T6745 | 145-150 | NCBITaxon:9606 | denotes | Human |
T6744 | 116-125 | SO_EXT:biological_sequence | denotes | sequences |
T6743 | 98-105 | CHEBI_PR_EXT:protein | denotes | protein |
T6742 | 89-93 | SO_EXT:cDNA | denotes | cDNA |
T6741 | 84-88 | PR_EXT:000012318 | denotes | PAX6 |
T6740 | 78-83 | NCBITaxon:9606 | denotes | human |
T6739 | 41-51 | CHEBI_SO_EXT:amino_acid | denotes | amino acid |
T6738 | 32-36 | SO_EXT:cDNA | denotes | cDNA |
T6737 | 17-27 | SO_EXT:engineered_biological_sequence | denotes | constructs |
T6736 | 0-5 | NCBITaxon_EXT:yeast | denotes | Yeast |
R4201 | T6788 | T6787 | _lexicallyChainedTo | primer,reverse |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6719 | 537-544 | SO:0001030 | denotes | forward |
T6718 | 517-524 | SO:0000112 | denotes | Primers |
T6717 | 502-506 | PR:000012318 | denotes | PAX6 |
T6716 | 455-461 | SO:0000417 | denotes | domain |
T6715 | 416-422 | SO:0000417 | denotes | domain |
T6714 | 399-403 | PR:P04386 | denotes | GAL4 |
T6713 | 305-311 | SO:0000440 | denotes | vector |
T6712 | 294-304 | GO:0010467 | denotes | expression |
T6711 | 259-263 | PR:000012318 | denotes | PAX6 |
T6710 | 156-163 | SO:0001023 | denotes | Allelic |
T6709 | 151-155 | PR:000012318 | denotes | PAX6 |
T6708 | 145-150 | NCBITaxon:9606 | denotes | Human |
T6707 | 84-88 | PR:000012318 | denotes | PAX6 |
T6706 | 78-83 | NCBITaxon:9606 | denotes | human |
T6735 | 1781-1784 | MOP:0000780 | denotes | cut |
T6734 | 1702-1703 | SO:0001031 | denotes | R |
T6733 | 1656-1657 | SO:0001030 | denotes | F |
T6732 | 1636-1643 | SO:0000112 | denotes | Primers |
T6731 | 1556-1575 | GO:0001171 | denotes | reverse transcribed |
T6730 | 1309-1315 | SO:0000132 | denotes | primer |
T6729 | 1297-1304 | _FRAGMENT | denotes | reverse |
T6728 | 1170-1176 | SO:0000417 | denotes | domain |
T6727 | 1161-1165 | PR:000012318 | denotes | PAX6 |
T6726 | 1033-1050 | SO:0000061 | denotes | restriction sites |
T6725 | 913-920 | MOP:0000780 | denotes | cutting |
T6724 | 849-855 | SO:0000417 | denotes | domain |
T6723 | 817-818 | SO:0001031 | denotes | R |
T6722 | 754-755 | SO:0001030 | denotes | F |
T6721 | 734-741 | SO:0000112 | denotes | Primers |
T6720 | 605-606 | SO:0001031 | denotes | R |
R4200 | T6730 | T6729 | _lexicallyChainedTo | primer,reverse |