PMC:1134658 / 12078-12210
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8059 | 0-11 | RB | denotes | Furthermore |
T8060 | 11-12 | -COMMA- | denotes | , |
T8061 | 13-16 | DT | denotes | the |
T8062 | 17-22 | NN | denotes | BMP-6 |
T8063 | 23-30 | VB | denotes | induced |
T8064 | 31-35 | NN | denotes | Smad |
T8065 | 36-51 | NN | denotes | phosphorylation |
T8066 | 52-55 | VB | denotes | was |
T8067 | 56-64 | VB | denotes | followed |
T8068 | 65-67 | IN | denotes | by |
T8069 | 68-69 | DT | denotes | a |
T8070 | 70-79 | JJ | denotes | selective |
T8071 | 80-92 | NN | denotes | upregulation |
T8072 | 93-95 | IN | denotes | of |
T8073 | 96-99 | NN | denotes | Id1 |
T8074 | 100-104 | NN | denotes | mRNA |
T8075 | 105-108 | CC | denotes | and |
T8076 | 109-119 | JJ | denotes | subsequent |
T8077 | 120-123 | NN | denotes | Id1 |
T8078 | 124-131 | NN | denotes | protein |
R6065 | T8063 | T8062 | arg1Of | induced,BMP-6 |
R6066 | T8065 | T8061 | arg1Of | phosphorylation,the |
R6067 | T8065 | T8063 | arg1Of | phosphorylation,induced |
R6068 | T8065 | T8064 | arg1Of | phosphorylation,Smad |
R6069 | T8065 | T8066 | arg1Of | phosphorylation,was |
R6070 | T8065 | T8067 | arg2Of | phosphorylation,followed |
R6071 | T8067 | T8059 | arg1Of | followed,Furthermore |
R6072 | T8067 | T8060 | arg1Of | followed,"," |
R6073 | T8067 | T8066 | arg2Of | followed,was |
R6074 | T8071 | T8067 | arg1Of | upregulation,followed |
R6075 | T8071 | T8068 | arg2Of | upregulation,by |
R6076 | T8071 | T8069 | arg1Of | upregulation,a |
R6077 | T8071 | T8070 | arg1Of | upregulation,selective |
R6078 | T8071 | T8072 | arg1Of | upregulation,of |
R6079 | T8074 | T8073 | arg1Of | mRNA,Id1 |
R6080 | T8074 | T8075 | arg1Of | mRNA,and |
R6081 | T8075 | T8072 | arg2Of | and,of |
R6082 | T8078 | T8075 | arg2Of | protein,and |
R6083 | T8078 | T8076 | arg1Of | protein,subsequent |
R6084 | T8078 | T8077 | arg1Of | protein,Id1 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10426 | 0-11 | RB | denotes | Furthermore |
T10427 | 11-12 | , | denotes | , |
T10428 | 13-16 | DT | denotes | the |
T10429 | 17-22 | NNP | denotes | BMP-6 |
T10430 | 23-30 | VBD | denotes | induced |
T10431 | 31-35 | NNP | denotes | Smad |
T10432 | 36-51 | NN | denotes | phosphorylation |
T10433 | 52-55 | VBD | denotes | was |
T10434 | 56-64 | VBN | denotes | followed |
T10435 | 65-67 | IN | denotes | by |
T10436 | 68-69 | DT | denotes | a |
T10437 | 70-79 | JJ | denotes | selective |
T10438 | 80-92 | NN | denotes | upregulation |
T10439 | 93-95 | IN | denotes | of |
T10440 | 96-99 | NNP | denotes | Id1 |
T10441 | 100-104 | NNP | denotes | mRNA |
T10442 | 105-108 | CC | denotes | and |
T10443 | 109-119 | JJ | denotes | subsequent |
T10444 | 120-123 | JJ | denotes | Id1 |
T10445 | 124-131 | NN | denotes | protein |
T10446 | 131-132 | . | denotes | . |
R7973 | T10426 | T10430 | advmod | Furthermore,induced |
R7974 | T10427 | T10430 | punct | ",",induced |
R7976 | T10428 | T10429 | det | the,BMP-6 |
R7977 | T10429 | T10430 | nsubj | BMP-6,induced |
R7979 | T10430 | T10430 | ROOT | induced,induced |
R7980 | T10431 | T10432 | compound | Smad,phosphorylation |
R7981 | T10432 | T10434 | nsubjpass | phosphorylation,followed |
R7983 | T10433 | T10434 | auxpass | was,followed |
R7984 | T10434 | T10430 | advcl | followed,induced |
R7985 | T10435 | T10434 | agent | by,followed |
R7987 | T10436 | T10438 | det | a,upregulation |
R7988 | T10437 | T10438 | amod | selective,upregulation |
R7989 | T10438 | T10435 | pobj | upregulation,by |
R7991 | T10439 | T10438 | prep | of,upregulation |
R7992 | T10440 | T10441 | compound | Id1,mRNA |
R7993 | T10441 | T10439 | pobj | mRNA,of |
R7994 | T10442 | T10441 | cc | and,mRNA |
R7997 | T10443 | T10445 | amod | subsequent,protein |
R7998 | T10444 | T10445 | amod | Id1,protein |
R8000 | T10445 | T10438 | conj | protein,upregulation |
R8001 | T10446 | T10434 | punct | .,followed |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7886 | 36-51 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7811 | 0-132 | Sentence | denotes | Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein. |
T99 | 0-132 | Sentence | denotes | Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T12979 | 17-22 | Protein | denotes | BMP-6 |
T12980 | 23-30 | Positive_regulation | denotes | induced |
T12981 | 31-35 | Protein | denotes | Smad |
T12982 | 36-51 | Phosphorylation | denotes | phosphorylation |
T12983 | 56-64 | Positive_regulation | denotes | followed |
T12984 | 56-64 | Positive_regulation | denotes | followed |
T12985 | 80-92 | Positive_regulation | denotes | upregulation |
T12986 | 80-92 | Positive_regulation | denotes | upregulation |
T12987 | 96-99 | Protein | denotes | Id1 |
T12988 | 120-123 | Protein | denotes | Id1 |
R10203 | T12979 | T12980 | causeOf | BMP-6,induced |
R10205 | T12981 | T12982 | themeOf | Smad,phosphorylation |
R10206 | T12982 | T12980 | themeOf | phosphorylation,induced |
R10207 | T12982 | T12983 | causeOf | phosphorylation,followed |
R10208 | T12982 | T12984 | causeOf | phosphorylation,followed |
R10209 | T12985 | T12983 | themeOf | upregulation,followed |
R10210 | T12986 | T12984 | themeOf | upregulation,followed |
R10211 | T12987 | T12985 | themeOf | Id1,upregulation |
R10213 | T12988 | T12986 | themeOf | Id1,upregulation |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T12312 | 17-22 | Protein | denotes | BMP-6 |
T12313 | 23-30 | Positive_regulation | denotes | induced |
T12314 | 31-35 | Protein | denotes | Smad |
T12315 | 36-51 | Phosphorylation | denotes | phosphorylation |
T12316 | 56-64 | Positive_regulation | denotes | followed |
T12317 | 80-92 | Positive_regulation | denotes | upregulation |
T12318 | 80-92 | Positive_regulation | denotes | upregulation |
T12319 | 96-104 | Protein | denotes | Id1 mRNA |
T12320 | 120-131 | Protein | denotes | Id1 protein |
R9785 | T12312 | T12313 | causeOf | BMP-6,induced |
R9832 | T12314 | T12315 | themeOf | Smad,phosphorylation |
R9835 | T12315 | T12316 | themeOf | phosphorylation,followed |
R9839 | T12315 | T12313 | themeOf | phosphorylation,induced |
R9841 | T12319 | T12317 | themeOf | Id1 mRNA,upregulation |
R9845 | T12320 | T12318 | themeOf | Id1 protein,upregulation |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7583 | 17-22 | Protein | denotes | BMP-6 |
T7584 | 23-30 | Positive_regulation | denotes | induced |
T7585 | 31-35 | Protein | denotes | Smad |
T7586 | 36-51 | Phosphorylation | denotes | phosphorylation |
T7587 | 56-64 | Positive_regulation | denotes | followed |
T7588 | 56-64 | Positive_regulation | denotes | followed |
T7589 | 80-92 | Positive_regulation | denotes | upregulation |
T7590 | 80-92 | Positive_regulation | denotes | upregulation |
T7591 | 96-99 | Protein | denotes | Id1 |
T7592 | 120-123 | Protein | denotes | Id1 |
R5834 | T7583 | T7584 | causeOf | BMP-6,induced |
R5835 | T7585 | T7586 | themeOf | Smad,phosphorylation |
R5836 | T7586 | T7584 | themeOf | phosphorylation,induced |
R5837 | T7586 | T7587 | causeOf | phosphorylation,followed |
R5838 | T7586 | T7588 | causeOf | phosphorylation,followed |
R5839 | T7589 | T7587 | themeOf | upregulation,followed |
R5840 | T7590 | T7588 | themeOf | upregulation,followed |
R5841 | T7591 | T7589 | themeOf | Id1,upregulation |
R5842 | T7592 | T7590 | themeOf | Id1,upregulation |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9852 | 17-20 | P12643 | denotes | BMP |
T9853 | 17-20 | P12644 | denotes | BMP |
T9854 | 17-20 | P18075 | denotes | BMP |
T9855 | 17-20 | P22004 | denotes | BMP |
T9856 | 17-22 | P22004 | denotes | BMP-6 |
T9857 | 96-99 | P41134 | denotes | Id1 |
T9858 | 120-123 | P41134 | denotes | Id1 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7373 | 17-22 | Protein | denotes | BMP-6 |
T7374 | 23-30 | Positive_regulation | denotes | induced |
T7375 | 31-35 | Protein | denotes | Smad |
T7376 | 36-51 | Phosphorylation | denotes | phosphorylation |
T7377 | 56-64 | Positive_regulation | denotes | followed |
T7378 | 80-92 | Positive_regulation | denotes | upregulation |
T7379 | 96-99 | Protein | denotes | Id1 |
T7380 | 120-123 | Protein | denotes | Id1 |
R5732 | T7373 | T7374 | causeOf | BMP-6,induced |
R5733 | T7375 | T7376 | themeOf | Smad,phosphorylation |
R5734 | T7376 | T7377 | causeOf | phosphorylation,followed |
R5735 | T7376 | T7374 | themeOf | phosphorylation,induced |
R5736 | T7378 | T7377 | themeOf | upregulation,followed |
R5737 | T7379 | T7378 | themeOf | Id1,upregulation |
R5738 | T7380 | T7378 | themeOf | Id1,upregulation |
tees-test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1417 | 17-22 | D055418 | denotes | BMP-6 |
T1418 | 17-22 | D055418 | denotes | BMP-6 |
T1419 | 17-22 | Q04906 | denotes | BMP-6 |
T1420 | 17-22 | PR:000000167 | denotes | BMP-6 |
T1421 | 17-22 | P20722 | denotes | BMP-6 |
T1422 | 17-22 | PR:Q04906 | denotes | BMP-6 |
T1423 | 17-22 | P22004 | denotes | BMP-6 |
T1424 | 17-22 | PR:P22004 | denotes | BMP-6 |
T1425 | 17-22 | PR:P20722 | denotes | BMP-6 |
T1426 | 36-51 | GO:0016310 | denotes | phosphorylation |
T1427 | 96-99 | PR:P41134 | denotes | Id1 |
T1428 | 96-99 | PR:P20067 | denotes | Id1 |
T1429 | 96-99 | PR:P41135 | denotes | Id1 |
T1430 | 96-99 | PR:000000039 | denotes | Id1 |
T1431 | 100-104 | D012333 | denotes | mRNA |
T1432 | 100-104 | CHEBI:33699 | denotes | mRNA |
T1433 | 100-104 | SO:0000234 | denotes | mRNA |
T1434 | 120-123 | PR:P41134 | denotes | Id1 |
T1435 | 120-123 | PR:P20067 | denotes | Id1 |
T1436 | 120-123 | PR:P41135 | denotes | Id1 |
T1437 | 120-123 | PR:000000039 | denotes | Id1 |
T1438 | 124-131 | CHEBI:36080 | denotes | protein |
T1439 | 124-131 | CHEBI:11122 | denotes | protein |
T1440 | 124-131 | PR:000000001 | denotes | protein |
T1441 | 124-131 | SO:0000104 | denotes | protein |
T1442 | 124-131 | GO:0003675 | denotes | protein |