PMC:1134658 / 12078-12210 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T8059","span":{"begin":0,"end":11},"obj":"RB"},{"id":"T8060","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T8061","span":{"begin":13,"end":16},"obj":"DT"},{"id":"T8062","span":{"begin":17,"end":22},"obj":"NN"},{"id":"T8063","span":{"begin":23,"end":30},"obj":"VB"},{"id":"T8064","span":{"begin":31,"end":35},"obj":"NN"},{"id":"T8065","span":{"begin":36,"end":51},"obj":"NN"},{"id":"T8066","span":{"begin":52,"end":55},"obj":"VB"},{"id":"T8067","span":{"begin":56,"end":64},"obj":"VB"},{"id":"T8068","span":{"begin":65,"end":67},"obj":"IN"},{"id":"T8069","span":{"begin":68,"end":69},"obj":"DT"},{"id":"T8070","span":{"begin":70,"end":79},"obj":"JJ"},{"id":"T8071","span":{"begin":80,"end":92},"obj":"NN"},{"id":"T8072","span":{"begin":93,"end":95},"obj":"IN"},{"id":"T8073","span":{"begin":96,"end":99},"obj":"NN"},{"id":"T8074","span":{"begin":100,"end":104},"obj":"NN"},{"id":"T8075","span":{"begin":105,"end":108},"obj":"CC"},{"id":"T8076","span":{"begin":109,"end":119},"obj":"JJ"},{"id":"T8077","span":{"begin":120,"end":123},"obj":"NN"},{"id":"T8078","span":{"begin":124,"end":131},"obj":"NN"}],"relations":[{"id":"R6065","pred":"arg1Of","subj":"T8063","obj":"T8062"},{"id":"R6066","pred":"arg1Of","subj":"T8065","obj":"T8061"},{"id":"R6067","pred":"arg1Of","subj":"T8065","obj":"T8063"},{"id":"R6068","pred":"arg1Of","subj":"T8065","obj":"T8064"},{"id":"R6069","pred":"arg1Of","subj":"T8065","obj":"T8066"},{"id":"R6070","pred":"arg2Of","subj":"T8065","obj":"T8067"},{"id":"R6071","pred":"arg1Of","subj":"T8067","obj":"T8059"},{"id":"R6072","pred":"arg1Of","subj":"T8067","obj":"T8060"},{"id":"R6073","pred":"arg2Of","subj":"T8067","obj":"T8066"},{"id":"R6074","pred":"arg1Of","subj":"T8071","obj":"T8067"},{"id":"R6075","pred":"arg2Of","subj":"T8071","obj":"T8068"},{"id":"R6076","pred":"arg1Of","subj":"T8071","obj":"T8069"},{"id":"R6077","pred":"arg1Of","subj":"T8071","obj":"T8070"},{"id":"R6078","pred":"arg1Of","subj":"T8071","obj":"T8072"},{"id":"R6079","pred":"arg1Of","subj":"T8074","obj":"T8073"},{"id":"R6080","pred":"arg1Of","subj":"T8074","obj":"T8075"},{"id":"R6081","pred":"arg2Of","subj":"T8075","obj":"T8072"},{"id":"R6082","pred":"arg2Of","subj":"T8078","obj":"T8075"},{"id":"R6083","pred":"arg1Of","subj":"T8078","obj":"T8076"},{"id":"R6084","pred":"arg1Of","subj":"T8078","obj":"T8077"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T10426","span":{"begin":0,"end":11},"obj":"RB"},{"id":"T10427","span":{"begin":11,"end":12},"obj":","},{"id":"T10428","span":{"begin":13,"end":16},"obj":"DT"},{"id":"T10429","span":{"begin":17,"end":22},"obj":"NNP"},{"id":"T10430","span":{"begin":23,"end":30},"obj":"VBD"},{"id":"T10431","span":{"begin":31,"end":35},"obj":"NNP"},{"id":"T10432","span":{"begin":36,"end":51},"obj":"NN"},{"id":"T10433","span":{"begin":52,"end":55},"obj":"VBD"},{"id":"T10434","span":{"begin":56,"end":64},"obj":"VBN"},{"id":"T10435","span":{"begin":65,"end":67},"obj":"IN"},{"id":"T10436","span":{"begin":68,"end":69},"obj":"DT"},{"id":"T10437","span":{"begin":70,"end":79},"obj":"JJ"},{"id":"T10438","span":{"begin":80,"end":92},"obj":"NN"},{"id":"T10439","span":{"begin":93,"end":95},"obj":"IN"},{"id":"T10440","span":{"begin":96,"end":99},"obj":"NNP"},{"id":"T10441","span":{"begin":100,"end":104},"obj":"NNP"},{"id":"T10442","span":{"begin":105,"end":108},"obj":"CC"},{"id":"T10443","span":{"begin":109,"end":119},"obj":"JJ"},{"id":"T10444","span":{"begin":120,"end":123},"obj":"JJ"},{"id":"T10445","span":{"begin":124,"end":131},"obj":"NN"},{"id":"T10446","span":{"begin":131,"end":132},"obj":"."}],"relations":[{"id":"R7973","pred":"advmod","subj":"T10426","obj":"T10430"},{"id":"R7974","pred":"punct","subj":"T10427","obj":"T10430"},{"id":"R7976","pred":"det","subj":"T10428","obj":"T10429"},{"id":"R7977","pred":"nsubj","subj":"T10429","obj":"T10430"},{"id":"R7979","pred":"ROOT","subj":"T10430","obj":"T10430"},{"id":"R7980","pred":"compound","subj":"T10431","obj":"T10432"},{"id":"R7981","pred":"nsubjpass","subj":"T10432","obj":"T10434"},{"id":"R7983","pred":"auxpass","subj":"T10433","obj":"T10434"},{"id":"R7984","pred":"advcl","subj":"T10434","obj":"T10430"},{"id":"R7985","pred":"agent","subj":"T10435","obj":"T10434"},{"id":"R7987","pred":"det","subj":"T10436","obj":"T10438"},{"id":"R7988","pred":"amod","subj":"T10437","obj":"T10438"},{"id":"R7989","pred":"pobj","subj":"T10438","obj":"T10435"},{"id":"R7991","pred":"prep","subj":"T10439","obj":"T10438"},{"id":"R7992","pred":"compound","subj":"T10440","obj":"T10441"},{"id":"R7993","pred":"pobj","subj":"T10441","obj":"T10439"},{"id":"R7994","pred":"cc","subj":"T10442","obj":"T10441"},{"id":"R7997","pred":"amod","subj":"T10443","obj":"T10445"},{"id":"R7998","pred":"amod","subj":"T10444","obj":"T10445"},{"id":"R8000","pred":"conj","subj":"T10445","obj":"T10438"},{"id":"R8001","pred":"punct","subj":"T10446","obj":"T10434"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T7886","span":{"begin":36,"end":51},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}

    sentences

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    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T12979","span":{"begin":17,"end":22},"obj":"Protein"},{"id":"T12980","span":{"begin":23,"end":30},"obj":"Positive_regulation"},{"id":"T12981","span":{"begin":31,"end":35},"obj":"Protein"},{"id":"T12982","span":{"begin":36,"end":51},"obj":"Phosphorylation"},{"id":"T12983","span":{"begin":56,"end":64},"obj":"Positive_regulation"},{"id":"T12984","span":{"begin":56,"end":64},"obj":"Positive_regulation"},{"id":"T12985","span":{"begin":80,"end":92},"obj":"Positive_regulation"},{"id":"T12986","span":{"begin":80,"end":92},"obj":"Positive_regulation"},{"id":"T12987","span":{"begin":96,"end":99},"obj":"Protein"},{"id":"T12988","span":{"begin":120,"end":123},"obj":"Protein"}],"relations":[{"id":"R10203","pred":"causeOf","subj":"T12979","obj":"T12980"},{"id":"R10205","pred":"themeOf","subj":"T12981","obj":"T12982"},{"id":"R10206","pred":"themeOf","subj":"T12982","obj":"T12980"},{"id":"R10207","pred":"causeOf","subj":"T12982","obj":"T12983"},{"id":"R10208","pred":"causeOf","subj":"T12982","obj":"T12984"},{"id":"R10209","pred":"themeOf","subj":"T12985","obj":"T12983"},{"id":"R10210","pred":"themeOf","subj":"T12986","obj":"T12984"},{"id":"R10211","pred":"themeOf","subj":"T12987","obj":"T12985"},{"id":"R10213","pred":"themeOf","subj":"T12988","obj":"T12986"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T12312","span":{"begin":17,"end":22},"obj":"Protein"},{"id":"T12313","span":{"begin":23,"end":30},"obj":"Positive_regulation"},{"id":"T12314","span":{"begin":31,"end":35},"obj":"Protein"},{"id":"T12315","span":{"begin":36,"end":51},"obj":"Phosphorylation"},{"id":"T12316","span":{"begin":56,"end":64},"obj":"Positive_regulation"},{"id":"T12317","span":{"begin":80,"end":92},"obj":"Positive_regulation"},{"id":"T12318","span":{"begin":80,"end":92},"obj":"Positive_regulation"},{"id":"T12319","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T12320","span":{"begin":120,"end":131},"obj":"Protein"}],"relations":[{"id":"R9785","pred":"causeOf","subj":"T12312","obj":"T12313"},{"id":"R9832","pred":"themeOf","subj":"T12314","obj":"T12315"},{"id":"R9835","pred":"themeOf","subj":"T12315","obj":"T12316"},{"id":"R9839","pred":"themeOf","subj":"T12315","obj":"T12313"},{"id":"R9841","pred":"themeOf","subj":"T12319","obj":"T12317"},{"id":"R9845","pred":"themeOf","subj":"T12320","obj":"T12318"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T7583","span":{"begin":17,"end":22},"obj":"Protein"},{"id":"T7584","span":{"begin":23,"end":30},"obj":"Positive_regulation"},{"id":"T7585","span":{"begin":31,"end":35},"obj":"Protein"},{"id":"T7586","span":{"begin":36,"end":51},"obj":"Phosphorylation"},{"id":"T7587","span":{"begin":56,"end":64},"obj":"Positive_regulation"},{"id":"T7588","span":{"begin":56,"end":64},"obj":"Positive_regulation"},{"id":"T7589","span":{"begin":80,"end":92},"obj":"Positive_regulation"},{"id":"T7590","span":{"begin":80,"end":92},"obj":"Positive_regulation"},{"id":"T7591","span":{"begin":96,"end":99},"obj":"Protein"},{"id":"T7592","span":{"begin":120,"end":123},"obj":"Protein"}],"relations":[{"id":"R5834","pred":"causeOf","subj":"T7583","obj":"T7584"},{"id":"R5835","pred":"themeOf","subj":"T7585","obj":"T7586"},{"id":"R5836","pred":"themeOf","subj":"T7586","obj":"T7584"},{"id":"R5837","pred":"causeOf","subj":"T7586","obj":"T7587"},{"id":"R5838","pred":"causeOf","subj":"T7586","obj":"T7588"},{"id":"R5839","pred":"themeOf","subj":"T7589","obj":"T7587"},{"id":"R5840","pred":"themeOf","subj":"T7590","obj":"T7588"},{"id":"R5841","pred":"themeOf","subj":"T7591","obj":"T7589"},{"id":"R5842","pred":"themeOf","subj":"T7592","obj":"T7590"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T9852","span":{"begin":17,"end":20},"obj":"P12643"},{"id":"T9853","span":{"begin":17,"end":20},"obj":"P12644"},{"id":"T9854","span":{"begin":17,"end":20},"obj":"P18075"},{"id":"T9855","span":{"begin":17,"end":20},"obj":"P22004"},{"id":"T9856","span":{"begin":17,"end":22},"obj":"P22004"},{"id":"T9857","span":{"begin":96,"end":99},"obj":"P41134"},{"id":"T9858","span":{"begin":120,"end":123},"obj":"P41134"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}

    test2

    {"project":"test2","denotations":[{"id":"T7373","span":{"begin":17,"end":22},"obj":"Protein"},{"id":"T7374","span":{"begin":23,"end":30},"obj":"Positive_regulation"},{"id":"T7375","span":{"begin":31,"end":35},"obj":"Protein"},{"id":"T7376","span":{"begin":36,"end":51},"obj":"Phosphorylation"},{"id":"T7377","span":{"begin":56,"end":64},"obj":"Positive_regulation"},{"id":"T7378","span":{"begin":80,"end":92},"obj":"Positive_regulation"},{"id":"T7379","span":{"begin":96,"end":99},"obj":"Protein"},{"id":"T7380","span":{"begin":120,"end":123},"obj":"Protein"}],"relations":[{"id":"R5732","pred":"causeOf","subj":"T7373","obj":"T7374"},{"id":"R5733","pred":"themeOf","subj":"T7375","obj":"T7376"},{"id":"R5734","pred":"causeOf","subj":"T7376","obj":"T7377"},{"id":"R5735","pred":"themeOf","subj":"T7376","obj":"T7374"},{"id":"R5736","pred":"themeOf","subj":"T7378","obj":"T7377"},{"id":"R5737","pred":"themeOf","subj":"T7379","obj":"T7378"},{"id":"R5738","pred":"themeOf","subj":"T7380","obj":"T7378"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}

    tees-test

    {"project":"tees-test","denotations":[{"id":"T1417","span":{"begin":17,"end":22},"obj":"D055418"},{"id":"T1418","span":{"begin":17,"end":22},"obj":"D055418"},{"id":"T1419","span":{"begin":17,"end":22},"obj":"Q04906"},{"id":"T1420","span":{"begin":17,"end":22},"obj":"PR:000000167"},{"id":"T1421","span":{"begin":17,"end":22},"obj":"P20722"},{"id":"T1422","span":{"begin":17,"end":22},"obj":"PR:Q04906"},{"id":"T1423","span":{"begin":17,"end":22},"obj":"P22004"},{"id":"T1424","span":{"begin":17,"end":22},"obj":"PR:P22004"},{"id":"T1425","span":{"begin":17,"end":22},"obj":"PR:P20722"},{"id":"T1426","span":{"begin":36,"end":51},"obj":"GO:0016310"},{"id":"T1427","span":{"begin":96,"end":99},"obj":"PR:P41134"},{"id":"T1428","span":{"begin":96,"end":99},"obj":"PR:P20067"},{"id":"T1429","span":{"begin":96,"end":99},"obj":"PR:P41135"},{"id":"T1430","span":{"begin":96,"end":99},"obj":"PR:000000039"},{"id":"T1431","span":{"begin":100,"end":104},"obj":"D012333"},{"id":"T1432","span":{"begin":100,"end":104},"obj":"CHEBI:33699"},{"id":"T1433","span":{"begin":100,"end":104},"obj":"SO:0000234"},{"id":"T1434","span":{"begin":120,"end":123},"obj":"PR:P41134"},{"id":"T1435","span":{"begin":120,"end":123},"obj":"PR:P20067"},{"id":"T1436","span":{"begin":120,"end":123},"obj":"PR:P41135"},{"id":"T1437","span":{"begin":120,"end":123},"obj":"PR:000000039"},{"id":"T1438","span":{"begin":124,"end":131},"obj":"CHEBI:36080"},{"id":"T1439","span":{"begin":124,"end":131},"obj":"CHEBI:11122"},{"id":"T1440","span":{"begin":124,"end":131},"obj":"PR:000000001"},{"id":"T1441","span":{"begin":124,"end":131},"obj":"SO:0000104"},{"id":"T1442","span":{"begin":124,"end":131},"obj":"GO:0003675"}],"text":"Furthermore, the BMP-6 induced Smad phosphorylation was followed by a selective upregulation of Id1 mRNA and subsequent Id1 protein."}