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PMC:1087847 / 38374-38991 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T11188 0-3 DT denotes The
T11189 4-12 NN denotes presence
T11190 87-95 VBN denotes analyzed
T11191 13-15 IN denotes of
T11192 16-23 NN denotes Annexin
T11193 24-26 NN denotes A7
T11194 27-31 NN denotes mRNA
T11195 32-34 IN denotes in
T11196 35-40 NN denotes mouse
T11197 44-49 NNS denotes cells
T11198 41-43 NN denotes ES
T11199 50-53 CC denotes and
T11200 54-61 NNS denotes embryos
T11201 62-64 NN denotes E7
T11202 64-66 , denotes ,
T11203 66-69 NN denotes E11
T11204 69-71 , denotes ,
T11205 71-74 NN denotes E15
T11206 75-78 CC denotes and
T11207 79-82 NN denotes E17
T11208 83-86 VBD denotes was
T11209 96-98 IN denotes by
T11210 99-107 NNP denotes northern
T11211 108-112 NN denotes blot
T11212 113-121 NN denotes analysis
T11213 121-122 . denotes .
T11214 122-230 sentence denotes An Embryo Multiple Tissue Northern Blot membrane was obtained from Clontech Laboratories (Heidelberg, FRG).
T11215 123-125 DT denotes An
T11216 163-171 NN denotes membrane
T11217 126-132 NN denotes Embryo
T11218 133-141 JJ denotes Multiple
T11219 142-148 NN denotes Tissue
T11220 149-157 NNP denotes Northern
T11221 158-162 NN denotes Blot
T11222 176-184 VBN denotes obtained
T11223 172-175 VBD denotes was
T11224 185-189 IN denotes from
T11225 190-198 NNP denotes Clontech
T11226 199-211 NNP denotes Laboratories
T11227 212-213 -LRB- denotes (
T11228 213-223 NNP denotes Heidelberg
T11229 223-225 , denotes ,
T11230 225-228 NNP denotes FRG
T11231 228-229 -RRB- denotes )
T11232 229-230 . denotes .
T11233 230-336 sentence denotes It contained approximately 2 μg of poly(A)+ RNA per lane from four different stages of mouse development.
T11234 231-233 PRP denotes It
T11235 234-243 VBD denotes contained
T11236 244-257 RB denotes approximately
T11237 258-259 CD denotes 2
T11238 260-262 NN denotes μg
T11239 263-265 IN denotes of
T11240 266-270 NN denotes poly
T11241 275-278 NN denotes RNA
T11242 270-271 -LRB- denotes (
T11243 271-272 NN denotes A
T11244 272-273 -RRB- denotes )
T11245 273-274 SYM denotes +
T11246 279-282 IN denotes per
T11247 283-287 NN denotes lane
T11248 288-292 IN denotes from
T11249 293-297 CD denotes four
T11250 308-314 NNS denotes stages
T11251 298-307 JJ denotes different
T11252 315-317 IN denotes of
T11253 318-323 NN denotes mouse
T11254 324-335 NN denotes development
T11255 335-336 . denotes .
T11256 336-397 sentence denotes RNA from ES cells was isolated with the RNeasy kit (Qiagen).
T11257 337-340 NN denotes RNA
T11258 359-367 VBN denotes isolated
T11259 341-345 IN denotes from
T11260 346-348 NN denotes ES
T11261 349-354 NNS denotes cells
T11262 355-358 VBD denotes was
T11263 368-372 IN denotes with
T11264 373-376 DT denotes the
T11265 384-387 NN denotes kit
T11266 377-383 NNP denotes RNeasy
T11267 388-389 -LRB- denotes (
T11268 389-395 NNP denotes Qiagen
T11269 395-396 -RRB- denotes )
T11270 396-397 . denotes .
T11271 397-617 sentence denotes The membranes were hybridized with a random-primed [α-32P]-dATP-labelled full length annexin A7 cDNA probe and with a β-actin specific probe for control in ExpressHyb solution according to the manufacturer's directions.
T11272 398-401 DT denotes The
T11273 402-411 NNS denotes membranes
T11274 417-427 VBN denotes hybridized
T11275 412-416 VBD denotes were
T11276 428-432 IN denotes with
T11277 433-434 DT denotes a
T11278 499-504 NN denotes probe
T11279 435-441 JJ denotes random
T11280 442-448 VBN denotes primed
T11281 441-442 HYPH denotes -
T11282 449-450 -LRB- denotes [
T11283 450-451 NN denotes α
T11284 451-452 HYPH denotes -
T11285 452-455 CD denotes 32P
T11286 455-456 -RRB- denotes ]
T11287 456-457 HYPH denotes -
T11288 457-461 NN denotes dATP
T11289 462-470 VBN denotes labelled
T11290 461-462 HYPH denotes -
T11291 471-475 JJ denotes full
T11292 476-482 NN denotes length
T11293 483-490 NN denotes annexin
T11294 491-493 NN denotes A7
T11295 494-498 NN denotes cDNA
T11296 505-508 CC denotes and
T11297 509-513 IN denotes with
T11298 514-515 DT denotes a
T11299 533-538 NN denotes probe
T11300 516-517 NN denotes β
T11301 518-523 NN denotes actin
T11302 517-518 HYPH denotes -
T11303 524-532 JJ denotes specific
T11304 539-542 IN denotes for
T11305 543-550 NN denotes control
T11306 551-553 IN denotes in
T11307 554-564 NN denotes ExpressHyb
T11308 565-573 NN denotes solution
T11309 574-583 VBG denotes according
T11310 584-586 IN denotes to
T11311 587-590 DT denotes the
T11312 591-603 NN denotes manufacturer
T11313 606-616 NNS denotes directions
T11314 603-605 POS denotes 's
T11315 616-617 . denotes .
R5440 T11188 T11189 det The,presence
R5441 T11189 T11190 nsubjpass presence,analyzed
R5442 T11191 T11189 prep of,presence
R5443 T11192 T11193 compound Annexin,A7
R5444 T11193 T11194 compound A7,mRNA
R5445 T11194 T11191 pobj mRNA,of
R5446 T11195 T11189 prep in,presence
R5447 T11196 T11197 compound mouse,cells
R5448 T11197 T11195 pobj cells,in
R5449 T11198 T11197 compound ES,cells
R5450 T11199 T11197 cc and,cells
R5451 T11200 T11201 compound embryos,E7
R5452 T11201 T11197 conj E7,cells
R5453 T11202 T11201 punct ", ",E7
R5454 T11203 T11201 conj E11,E7
R5455 T11204 T11203 punct ", ",E11
R5456 T11205 T11203 conj E15,E11
R5457 T11206 T11205 cc and,E15
R5458 T11207 T11205 conj E17,E15
R5459 T11208 T11190 auxpass was,analyzed
R5460 T11209 T11190 prep by,analyzed
R5461 T11210 T11211 compound northern,blot
R5462 T11211 T11212 compound blot,analysis
R5463 T11212 T11209 pobj analysis,by
R5464 T11213 T11190 punct .,analyzed
R5465 T11215 T11216 det An,membrane
R5466 T11216 T11222 nsubjpass membrane,obtained
R5467 T11217 T11216 nmod Embryo,membrane
R5468 T11218 T11219 amod Multiple,Tissue
R5469 T11219 T11216 compound Tissue,membrane
R5470 T11220 T11221 compound Northern,Blot
R5471 T11221 T11216 compound Blot,membrane
R5472 T11223 T11222 auxpass was,obtained
R5473 T11224 T11222 prep from,obtained
R5474 T11225 T11226 compound Clontech,Laboratories
R5475 T11226 T11224 pobj Laboratories,from
R5476 T11227 T11228 punct (,Heidelberg
R5477 T11228 T11226 parataxis Heidelberg,Laboratories
R5478 T11229 T11228 punct ", ",Heidelberg
R5479 T11230 T11228 npadvmod FRG,Heidelberg
R5480 T11231 T11228 punct ),Heidelberg
R5481 T11232 T11222 punct .,obtained
R5482 T11234 T11235 nsubj It,contained
R5483 T11236 T11237 advmod approximately,2
R5484 T11237 T11238 nummod 2,μg
R5485 T11238 T11235 dobj μg,contained
R5486 T11239 T11238 prep of,μg
R5487 T11240 T11241 nmod poly,RNA
R5488 T11241 T11239 pobj RNA,of
R5489 T11242 T11243 punct (,A
R5490 T11243 T11241 parataxis A,RNA
R5491 T11244 T11243 punct ),A
R5492 T11245 T11241 punct +,RNA
R5493 T11246 T11238 prep per,μg
R5494 T11247 T11246 pobj lane,per
R5495 T11248 T11238 prep from,μg
R5496 T11249 T11250 nummod four,stages
R5497 T11250 T11248 pobj stages,from
R5498 T11251 T11250 amod different,stages
R5499 T11252 T11250 prep of,stages
R5500 T11253 T11254 compound mouse,development
R5501 T11254 T11252 pobj development,of
R5502 T11255 T11235 punct .,contained
R5503 T11257 T11258 nsubjpass RNA,isolated
R5504 T11259 T11257 prep from,RNA
R5505 T11260 T11261 compound ES,cells
R5506 T11261 T11259 pobj cells,from
R5507 T11262 T11258 auxpass was,isolated
R5508 T11263 T11258 prep with,isolated
R5509 T11264 T11265 det the,kit
R5510 T11265 T11263 pobj kit,with
R5511 T11266 T11265 compound RNeasy,kit
R5512 T11267 T11268 punct (,Qiagen
R5513 T11268 T11265 parataxis Qiagen,kit
R5514 T11269 T11268 punct ),Qiagen
R5515 T11270 T11258 punct .,isolated
R5516 T11272 T11273 det The,membranes
R5517 T11273 T11274 nsubjpass membranes,hybridized
R5518 T11275 T11274 auxpass were,hybridized
R5519 T11276 T11274 prep with,hybridized
R5520 T11277 T11278 det a,probe
R5521 T11278 T11276 pobj probe,with
R5522 T11279 T11280 amod random,primed
R5523 T11280 T11278 amod primed,probe
R5524 T11281 T11280 punct -,primed
R5525 T11282 T11283 punct [,α
R5526 T11283 T11280 parataxis α,primed
R5527 T11284 T11283 punct -,α
R5528 T11285 T11283 nummod 32P,α
R5529 T11286 T11283 punct ],α
R5530 T11287 T11278 punct -,probe
R5531 T11288 T11289 npadvmod dATP,labelled
R5532 T11289 T11278 amod labelled,probe
R5533 T11290 T11289 punct -,labelled
R5534 T11291 T11292 amod full,length
R5535 T11292 T11278 compound length,probe
R5536 T11293 T11294 compound annexin,A7
R5537 T11294 T11278 compound A7,probe
R5538 T11295 T11278 compound cDNA,probe
R5539 T11296 T11276 cc and,with
R5540 T11297 T11276 conj with,with
R5541 T11298 T11299 det a,probe
R5542 T11299 T11297 pobj probe,with
R5543 T11300 T11301 compound β,actin
R5544 T11301 T11303 npadvmod actin,specific
R5545 T11302 T11301 punct -,actin
R5546 T11303 T11299 amod specific,probe
R5547 T11304 T11274 prep for,hybridized
R5548 T11305 T11304 pobj control,for
R5549 T11306 T11274 prep in,hybridized
R5550 T11307 T11308 compound ExpressHyb,solution
R5551 T11308 T11306 pobj solution,in
R5552 T11309 T11274 prep according,hybridized
R5553 T11310 T11309 prep to,according
R5554 T11311 T11312 det the,manufacturer
R5555 T11312 T11313 poss manufacturer,directions
R5556 T11313 T11310 pobj directions,to
R5557 T11314 T11312 case 's,manufacturer
R5558 T11315 T11274 punct .,hybridized

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11158 16-26 PR_EXT:000004080 denotes Annexin A7
T11159 27-31 CHEBI_SO_EXT:mRNA denotes mRNA
T11160 35-40 NCBITaxon:10088 denotes mouse
T11161 41-49 CL:0002322 denotes ES cells
T11162 44-49 CL_GO_EXT:cell denotes cells
T11163 54-61 UBERON:0000922 denotes embryos
T11164 126-132 UBERON:0000922 denotes Embryo
T11165 142-148 UBERON:0000479 denotes Tissue
T11166 271-272 CHEBI_EXT:adenine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes A
T11167 275-278 CHEBI_SO_EXT:RNA denotes RNA
T11168 318-323 NCBITaxon:10088 denotes mouse
T11169 337-340 CHEBI_SO_EXT:RNA denotes RNA
T11170 346-354 CL:0002322 denotes ES cells
T11171 349-354 CL_GO_EXT:cell denotes cells
T11172 417-427 GO:0097617 denotes hybridized
T11173 452-455 CHEBI:37972 denotes 32P
T11174 457-461 CHEBI_EXT:dATP denotes dATP
T11175 462-470 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labelled
T11176 483-493 PR_EXT:000004080 denotes annexin A7
T11177 494-498 SO_EXT:cDNA denotes cDNA
T11178 499-504 CHEBI_SO_EXT:molecular_probe denotes probe
T11179 516-523 PR_EXT:000003676 denotes β-actin
T11180 533-538 CHEBI_SO_EXT:molecular_probe denotes probe
T11181 565-573 CHEBI:75958 denotes solution

biosemtest

Id Subject Object Predicate Lexical cue
T10976 478-484 UMLS/C1444754 denotes ngth a
T10977 546-553 UMLS/C1882979 denotes trol in
T10978 385-388 UMLS/C1705212 denotes it
T10979 338-341 UMLS/C0035668 denotes NA
T10980 536-541 UMLS/C1704681 denotes be fo
T10981 309-315 UMLS/C1300072 denotes tages
T10982 536-541 UMLS/C0182400 denotes be fo
T10983 309-315 UMLS/C1306673 denotes tages
T10984 520-526 UP/Q9P4D1 denotes tin sp
T10986 142-148 UMLS/C1547928 denotes Tissue
T10987 520-526 UP/Q9UVX4 denotes tin sp
T10988 27-31 UMLS/C0035696 denotes mRNA
T10989 225-228 UMLS/C1424298 denotes FRG
T10990 587-589 UMLS/C0319022 denotes th
T10991 520-526 UP/P53689 denotes tin sp
T10992 520-526 UP/Q39596 denotes tin sp
T10993 16-26 UP/Q07076 denotes Annexin A7
T10994 485-495 UP/Q07076 denotes nexin A7 c
T10995 520-526 UP/P17128 denotes tin sp
T10996 16-26 UP/P24639 denotes Annexin A7
T10997 485-495 UP/P24639 denotes nexin A7 c
T10998 520-526 UP/O13419 denotes tin sp
T10999 16-26 UP/P20072 denotes Annexin A7
T11000 485-495 UP/P20072 denotes nexin A7 c
T11001 520-526 UP/Q92193 denotes tin sp
T11002 199-211 UMLS/C1619828 denotes Laboratories
T11003 199-211 UMLS/C0022877 denotes Laboratories
T11004 520-526 UP/Q05214 denotes tin sp
T11005 568-576 UMLS/C0037633 denotes ution ac
T11006 4-12 UMLS/C0392148 denotes presence
T11007 360-368 UMLS/C1546680 denotes solated
T11008 520-526 UP/Q9UVF3 denotes tin sp
T11009 520-526 UP/O81221 denotes tin sp
T11010 520-526 UP/P53455 denotes tin sp
T11011 536-541 UMLS/C0728863 denotes be fo
T11012 546-553 UMLS/C0009932 denotes trol in
T11014 99-121 UMLS/C0005861 denotes northern blot analysis
T11015 149-162 UMLS/C0005861 denotes Northern Blot
T11017 142-148 UMLS/C0040300 denotes Tissue
T11018 325-336 UMLS/C1527148 denotes evelopment.
T11019 520-526 UP/P53502 denotes tin sp
T11020 520-526 UP/P53476 denotes tin sp
T11021 568-576 UMLS/C1382100 denotes ution ac
T11022 176-184 UMLS/C1301820 denotes obtained
T11023 520-526 UP/P60011 denotes tin sp
T11024 16-26 UMLS/C0103408 denotes Annexin A7
T11025 485-495 UMLS/C0103408 denotes nexin A7 c
T11026 520-526 UP/P53500 denotes tin sp
T11027 280-283 UMLS/C0330664 denotes er
T11028 520-526 UP/P68555 denotes tin sp
T11029 520-526 UP/Q8SWN8 denotes tin sp
T11031 54-61 UMLS/C1305370 denotes embryos
T11032 126-132 UMLS/C1305370 denotes Embryo
T11033 520-526 UP/P10989 denotes tin sp
T11034 176-184 UMLS/C1706701 denotes obtained
T11035 520-526 UP/Q2U7A3 denotes tin sp
T11036 199-211 UMLS/C1571737 denotes Laboratories
T11037 199-211 UMLS/C1548427 denotes Laboratories
T11038 520-526 UP/P50138 denotes tin sp
T11039 520-526 UP/P26183 denotes tin sp
T11040 62-64 UMLS/C1335333 denotes E7
T11041 520-526 UP/P48465 denotes tin sp
T11042 520-526 UP/P45521 denotes tin sp
T11043 546-553 UMLS/C1550141 denotes trol in
T11044 299-308 UMLS/C1705242 denotes ifferent
T11045 496-506 UMLS/C0007512 denotes NA probe a
T11046 527-535 UMLS/C0205369 denotes cific pr
T11047 16-26 UP/Q92125 denotes Annexin A7
T11048 485-495 UP/Q92125 denotes nexin A7 c
T11049 520-526 UP/O74258 denotes tin sp
T11050 520-526 UP/P53499 denotes tin sp
T11051 436-442 UMLS/C0439605 denotes andom-
T11052 520-526 UP/P90689 denotes tin sp
T11053 536-541 UMLS/C0419358 denotes be fo
T11054 309-315 UMLS/C0205390 denotes tages
T11055 520-526 UP/P60009 denotes tin sp
T11056 338-341 UMLS/C1325819 denotes NA
T11057 520-526 UP/O65316 denotes tin sp
T11058 199-211 UMLS/C2598148 denotes Laboratories
T11060 133-141 UMLS/C0439064 denotes Multiple
T11061 4-12 UMLS/C0150312 denotes presence
T11062 520-526 UP/P45520 denotes tin sp
T11063 520-526 UP/Q9UVZ8 denotes tin sp
T11064 360-368 UMLS/C0205409 denotes solated
T11065 520-526 UP/O16808 denotes tin sp
T11066 520-526 UP/O65315 denotes tin sp
T11067 520-526 UP/P81085 denotes tin sp
T11068 520-526 UP/O17320 denotes tin sp
T11069 520-526 UP/A5DQP9 denotes tin sp
T11070 546-553 UMLS/C1547100 denotes trol in
T11071 520-526 UMLS/C0439681 denotes tin sp
T11072 520-526 UP/Q24733 denotes tin sp
T11073 520-526 UP/O65314 denotes tin sp
T11074 360-368 UMLS/C0370215 denotes solated
T11075 385-388 UMLS/C1553450 denotes it
T11076 520-526 UP/P53491 denotes tin sp
T11077 294-298 UMLS/C0205450 denotes our
T11078 568-576 UMLS/C2699488 denotes ution ac
T11079 385-388 UMLS/C1690540 denotes it
T11080 594-608 UMLS/C1548599 denotes ufacturer's di
T11081 267-279 UMLS/C0137714 denotes oly(A)+ RNA
T11082 520-526 UP/Q6TCF2 denotes tin sp
T11083 520-526 UP/P53477 denotes tin sp
T11084 473-477 UMLS/C0443225 denotes ll l
T11085 520-526 UP/Q75D00 denotes tin sp
T11086 546-553 UMLS/C0243148 denotes trol in
T11087 520-526 UP/P78711 denotes tin sp
T11088 520-526 UP/P80709 denotes tin sp
T11089 520-526 UP/O00937 denotes tin sp
T11090 520-526 UP/Q99023 denotes tin sp
T11091 520-526 UP/Q39758 denotes tin sp
T11092 536-541 UMLS/C2347609 denotes be fo
T11094 54-61 UMLS/C0013935 denotes embryos
T11095 126-132 UMLS/C0013935 denotes Embryo
T11096 16-26 UMLS/C1412427 denotes Annexin A7
T11097 485-495 UMLS/C1412427 denotes nexin A7 c
T11098 594-608 UMLS/C0947322 denotes ufacturer's di
T11099 520-526 UP/P10365 denotes tin sp
T11100 520-526 UP/Q8X119 denotes tin sp
T11101 577-586 UMLS/C0680240 denotes ording to
T11102 16-26 UP/P20073 denotes Annexin A7
T11103 485-495 UP/P20073 denotes nexin A7 c
T11104 16-26 UP/Q4R5L5 denotes Annexin A7
T11105 485-495 UP/Q4R5L5 denotes nexin A7 c
T11106 568-576 UMLS/C0525069 denotes ution ac
T11107 87-95 UMLS/C0936012 denotes analyzed
T11108 309-315 UMLS/C0332305 denotes tages
T11109 234-243 UMLS/C1549781 denotes contained
T11110 594-608 UMLS/C1705426 denotes ufacturer's di
T11111 520-526 UMLS/C0001271 denotes tin sp
T11112 520-526 UP/P60010 denotes tin sp
T11113 520-526 UP/P14235 denotes tin sp
T11114 234-243 UMLS/C2700400 denotes contained
T11115 536-541 UMLS/C1442917 denotes be fo
T11116 527-535 UMLS/C1552740 denotes cific pr
T11117 546-553 UMLS/C0332298 denotes trol in
T11118 284-288 UMLS/C1708639 denotes ane
T11119 520-526 UP/P26182 denotes tin sp
T11120 41-49 UMLS/C0596508 denotes ES cells
T11121 347-355 UMLS/C0596508 denotes S cells
T11122 520-526 UP/P53498 denotes tin sp
T11123 520-526 UP/P13363 denotes tin sp
T11124 520-526 UP/P20904 denotes tin sp
T11125 520-526 UP/P51775 denotes tin sp
T11127 149-162 UMLS/C1621557 denotes Northern Blot
T11128 360-368 UMLS/C1548221 denotes solated
T11129 360-368 UMLS/C1764827 denotes solated
T11130 234-243 UMLS/C0332256 denotes contained
T11131 520-526 UP/P91754 denotes tin sp
T11132 520-526 UP/Q92192 denotes tin sp
T11133 520-526 UP/Q11212 denotes tin sp
T11134 520-526 UP/P11426 denotes tin sp
T11135 594-608 UMLS/C1546933 denotes ufacturer's di
T11136 520-526 UP/P30161 denotes tin sp
T11137 520-526 UP/P24902 denotes tin sp
T11138 385-388 UMLS/C0812225 denotes it
T11139 385-388 UMLS/C1704742 denotes it
T11140 199-211 UMLS/C1697786 denotes Laboratories
T11141 546-553 UMLS/C2587213 denotes trol in
T11142 244-257 UMLS/C0332232 denotes approximately

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11144 16-26 PR:000004080 denotes Annexin A7
T11145 35-40 NCBITaxon:10088 denotes mouse
T11146 41-49 CL:0002322 denotes ES cells
T11147 54-61 UBERON:0000922 denotes embryos
T11148 126-132 UBERON:0000922 denotes Embryo
T11149 142-148 UBERON:0000479 denotes Tissue
T11150 318-323 NCBITaxon:10088 denotes mouse
T11151 346-354 CL:0002322 denotes ES cells
T11152 417-427 GO:0097617 denotes hybridized
T11153 452-455 CHEBI:37972 denotes 32P
T11154 483-493 PR:000004080 denotes annexin A7
T11155 516-523 PR:000003676 denotes β-actin
T11156 565-573 CHEBI:75958 denotes solution