| KAIST_NLP_Annotation3 | | | 4.73 K | | kaist_nlp | 2023-11-29 | Developing | |
| KAIST_NLP_Annotation7 | | | 4.64 K | | kaist_nlp | 2023-11-29 | Developing | |
| KAIST_NLP_Annotation10 | | | 4.76 K | | kaist_nlp | 2023-11-29 | Developing | |
| hahm_test | | hahm_test | 0 | hahm | kaist_nlp | 2019-04-02 | Testing | |
| bionlp-st-gro-2013-development | | The development data set of the BioNLP-ST 2013 GRO task, including 50 MEDLINE abstracts that are annotated with concepts and relations of the Gene Regulation Ontology (GRO; http://www.ebi.ac.uk/Rebholz-srv/GRO/GRO.html) | 2.66 K | Jung-jae Kim | Jung-jae Kim | 2023-11-29 | Testing | |
| bionlp-st-gro-2013-training | | The training data set of the BioNLP-ST 2013 GRO task, including 150 MEDLINE abstracts that are annotated with concepts and relations of the Gene Regulation Ontology (GRO; http://www.ebi.ac.uk/Rebholz-srv/GRO/GRO.html) | 8.02 K | Jung-jae Kim | Jung-jae Kim | 2023-11-29 | Testing | |
| causal0001 | | test | 0 | ju-hyuck han | Ju-Hyuck Han | 2024-01-17 | | |
| JF-test | | A test corpus for exploring this service | 9 | Johan Frid | johanf | 2023-12-03 | Testing | |
| JF-test2 | | | 0 | | johanf | 2020-03-26 | Testing | |
| GlyCosmos15-Glycan | | | 21.4 K | | Jin-Dong Kim | 2024-09-19 | Developing | |
| genia-medco-coref | | Coreference annotation made to the Genia corpus, following the MUC annotation scheme. It is a product of the collaboration between the Genia and the MedCo projects. | 45.9 K | MedCo project & Genia project | Jin-Dong Kim | 2023-11-24 | Developing | |
| CORD-19-PD-MONDO | | PubDictionaries annotation for MONDO terms - updated at 2020-04-30
It is disease term annotation based on MONDO.
Version 2020-04-20.
The terms in MONDO are loaded in PubDictionaries, with which the annotations in this project are produced. The parameter configuration used for this project is here.
Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. | 6.32 M | | Jin-Dong Kim | 2023-11-27 | Released | |
| LitCovid-sample-PD-GlycoEpitope | | | 1 | | Jin-Dong Kim | 2023-11-27 | Developing | |
| LitCoin-PubTator-for-Tuning | | A set of randomly selected PubMed articles with PubTator annotation.
The labels of PubTator annotations are converted to corresponding labels for LitCoin as follows:
'Gene' -> 'GeneOrGeneProduct',
'Disease' -> 'DiseaseOrPhenotypicFeature',
'Chemical' -> 'ChemicalEntity'
'Species' -> 'OrganismTaxon'
'Mutation' -> 'SequenceVariant'
'CellLine' -> 'CellLine' | 14.2 K | | Jin-Dong Kim | 2023-11-29 | | |
| LitCovid-PD-MONDO-v1 | | PubDictionaries annotation for disease terms - updated at 2020-04-20
It is based on MONDO Version 2020-04-20.
The terms in MONDO are loaded in PubDictionaries, with which the annotations in this project are produced. The parameter configuration used for this project is here.
Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. | 13.4 K | | Jin-Dong Kim | 2023-11-29 | Released | |
| LitCovid-sample-PD-GO-BP-0 | | | 708 | | Jin-Dong Kim | 2023-11-29 | Beta | |
| LitCovid-GlycoBiology | | Articles from GlycoBiology, received by the keyword "Covid-19" | 0 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| LitCovid-sentences-v1 | | Sentence segmentation of all the texts in the LitCovid literature. The segmentation is automatically obtained using the TextSentencer annotation service developed and maintained by DBCLS. | 16.5 K | | Jin-Dong Kim | 2023-11-27 | Released | |
| CORD-19-sample-UBERON | | | 54 | | Jin-Dong Kim | 2023-11-26 | Developing | |
| glycogenes | | | 2.75 K | | Jin-Dong Kim | 2023-11-30 | Testing | |
