JournalClub | | | 170 | | AikoHIRAKI | 2023-11-29 | Developing | |
KYMEKA20240117Test | | This is a project to express the linking of terms and ontologies (DOID, FMA, Radlex) used in the dataset 'Annotationdata_type-2' used in BLAH8_Radiological Causal Annotation. | 0 | Kyung-Min Chae | Kyung-Min Chae | 2024-01-17 | Testing | |
Kymeka_cho | | | 91 | | | 2024-01-18 | Testing | |
Kymeka_cho_test | | | 583 | | davidecho | 2024-01-18 | | |
LappsTest | | Project to test posting annotations directly from the Language Applications Grid | 2.67 K | Keith Suderman | ksuderman | 2023-11-27 | Developing | |
LitCoin_CellLine | | CellLine | 113 | | Yasunori Yamamoto | 2023-11-29 | Developing | |
LitCoin-Chemical-MeSH-CHEBI | | ChemicalEntity:
Annotated by PD-MeSH2022_CHEBI_tuned-B | 3.84 K | | yucca | 2023-11-29 | Testing | |
LitCoin-Disease-MeSH | | MeSH C and F03, plus false negatives that appear in two or more documents in LitCoin-entities | 3.56 K | | yucca | 2023-11-29 | Testing | |
LitCoin-Disease-Tuning-1 | | Annotator=PD-MeSH2022_C_F03_plus_allFN-B | 6.98 K | | yucca | 2023-11-29 | | |
LitCoin-entities-OrganismTaxon-PD | | | 949 | | Jin-Dong Kim | 2023-11-27 | Testing | |
LitCoin-GeneOrGeneProduct-v0 | | https://pubdictionaries.org/text_annotation.json?dictionary=NCBIGene-NER&threshold=0.85&abbreviation=true | 15.8 K | | Jin-Dong Kim | 2023-11-29 | | |
LitCoin-GeneOrGeneProduct-v2 | | threshold = 0.93 | 8.98 K | | Jin-Dong Kim | 2023-11-29 | | |
LitCoin-GeneOrGeneProduct-v3 | | GeneOrGeneProduct
after false positive control | 4.67 K | | Jin-Dong Kim | 2023-11-24 | | |
LitCoin-MeSH-Disease-2 | | Flase Negative全部入れてみた | 4.08 K | | yucca | 2023-11-29 | | |
LitCoin_Mondo | | | 1.96 K | | Yasunori Yamamoto | 2023-11-28 | Testing | |
LitCoin_Mondo_095 | | | 3.26 K | | Yasunori Yamamoto | 2023-11-29 | Testing | |
LitCoin-MONDO_bioort2019 | | DiseaeseOrPhenotypicFeature | 3.72 K | | Eisuke Dohi | 2023-11-29 | Testing | |
LitCoin-NCBITaxon-2 | | | 1.65 K | | atsuko | 2023-11-29 | Testing | |
LitCoin-PubTator_CellLine | | | 388 | | Yasunori Yamamoto | 2023-11-29 | Testing | |
LitCoin-PubTator-for-Tuning | | A set of randomly selected PubMed articles with PubTator annotation.
The labels of PubTator annotations are converted to corresponding labels for LitCoin as follows:
'Gene' -> 'GeneOrGeneProduct',
'Disease' -> 'DiseaseOrPhenotypicFeature',
'Chemical' -> 'ChemicalEntity'
'Species' -> 'OrganismTaxon'
'Mutation' -> 'SequenceVariant'
'CellLine' -> 'CellLine' | 14.2 K | | Jin-Dong Kim | 2023-11-29 | | |