| GlyCosmos600-GlycoEpitope | | | 277 | | Jin-Dong Kim | 2023-11-27 | Testing | |
| CORD-19-sample-IDO | | | 76 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| LitCovid-PD-HP-v1 | | PubDictionaries annotation for human phenotype terms - updated at 2020-04-20
Disease term annotation based on HP.
Version 2020-04-20.
The terms in HP are loaded in PubDictionaries, with which the annotations in this project are produced. The parameter configuration used for this project is here.
Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. | 3.03 K | | Jin-Dong Kim | 2023-11-29 | Released | |
| LitCoin-PubTator-for-Tuning | | A set of randomly selected PubMed articles with PubTator annotation.
The labels of PubTator annotations are converted to corresponding labels for LitCoin as follows:
'Gene' -> 'GeneOrGeneProduct',
'Disease' -> 'DiseaseOrPhenotypicFeature',
'Chemical' -> 'ChemicalEntity'
'Species' -> 'OrganismTaxon'
'Mutation' -> 'SequenceVariant'
'CellLine' -> 'CellLine' | 14.2 K | | Jin-Dong Kim | 2023-11-29 | | |
| PubCasesCollection | | abstracts in PubCases | 0 | | Jin-Dong Kim | 2023-11-29 | | |
| LitCovid-sample-MedDRA | | | 185 | | Jin-Dong Kim | 2023-11-27 | Testing | |
| GlyCosmos-GlycanStructure-c | | | 0 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| GlycoGenes | | annotation for glyco-genes based on GGDB | 1.01 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
| LitCovid-sample-HP | | | 0 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| CORD-19-sample-paragraphs | | | 28 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| uniprot-human | | Uniprot proteins for human | 21.8 K | Jin-Dong Kim | Jin-Dong Kim | 2023-11-29 | Testing | |
| test_lasige | | | 494 | | Jin-Dong Kim | 2023-12-02 | Testing | |
| LitCovid-sample-Pubtator | | | 3.86 K | | Jin-Dong Kim | 2023-11-28 | Uploading | |
| PubMed-2000 | | abstracts published in 2000. | 0 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| GlycoBiology-Motifs | | | 4.15 K | | Jin-Dong Kim | 2023-11-29 | | |
| CORD-19-sample-sentences | | | 161 | | Jin-Dong Kim | 2023-11-27 | Developing | |
| LitCovid-TimeML | | | 426 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
| LitCoin-entities | | | 13.6 K | | Jin-Dong Kim | 2023-11-29 | Testing | |
| pubmed-2016 | | abstracts published in 2016 | 0 | | Jin-Dong Kim | 2023-11-28 | | |
| LitCovid-sample-Glycan | | | 3.21 K | | Jin-Dong Kim | 2023-11-29 | Testing | |
