| GlyCosmos600-docs | | A random collection of 600 PubMed abstracts from 6 glycobiology-related journals: Glycobiology, Glycoconjugate journal, The Journal of biological chemistry, Journal of proteome research, Journal of proteomics, and Carbohydrate research. The whole PMIDs were collected on June 11, 2019. From each journal, 100 PMIDs were randomly sampled. | 0 | | Jin-Dong Kim | 2023-11-29 | Released | |
| LitCovid-sample-PD-MONDO | | | 1.21 K | | Jin-Dong Kim | 2023-11-27 | Developing | |
| LitCovid-PD-UBERON | | | 540 K | | Jin-Dong Kim | 2023-11-29 | | |
| CORD-19-PD-UBERON | | PubDictionaries annotation for UBERON terms - updated at 2020-04-30
It is disease term annotation based on Uberon.
The terms in Uberon are uploaded in PubDictionaries
(Uberon), with which the annotations in this project are produced.
The parameter configuration used for this project is
here.
Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. | 1.42 M | | Jin-Dong Kim | 2023-11-24 | Released | |
| uniprot-mouse | | Protein annotation based on UniProt | 11.5 K | | Jin-Dong Kim | 2023-11-28 | Developing | |
| CORD-19_Non-commercial_use_subset | | The Non commercial use subset of the CORD-19 dataset.
The documents in this project will be updated as the CORD-19 dataset grows.
See the COVID DATASET LICENSE AGREEMENT. | 0 | | Jin-Dong Kim | 2023-11-29 | Released | |
| GlycoConjugate-collection | | The PubMed entries (titles and abstracts) from the journal of GlycoConjugate | 0 | | Jin-Dong Kim | 2023-11-28 | Developing | |
| twitter-test | | | 13 | | Jin-Dong Kim | 2023-11-28 | Developing | |
| LitCovid-sample-DRON | | | 0 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| Glycosmos6-GlycoEpitope | | Automatic annotation by PD-GlycoEpitope. | 19.9 K | | Jin-Dong Kim | 2023-11-28 | Developing | |
| tutorial1 | | | 5 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| LitCovid-GlycoBiology | | Articles from GlycoBiology, received by the keyword "Covid-19" | 0 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| LitCovid-sample-PD-MAT | | | 251 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| GlyCosmos6-docs | | | 0 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| UBERON-AE | | Annotation for anatomical entities based on the "Anatomical Entity" subtree of UBERON ontology.
Annotations are automatically produced using PubDictionaries with threshold: 0.85. | 859 K | DBCLS | Jin-Dong Kim | 2023-11-29 | Developing | |
| MENA-example | | | 5 | | Jin-Dong Kim | 2023-11-29 | | |
| epi-statement-test | | | 2 | | Jin-Dong Kim | 2023-11-30 | Testing | |
| CORD-19-sample-paragraphs | | | 28 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| GlyCosmos600-MAT | | | 863 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| CORD-19-sample-IDO | | | 76 | | Jin-Dong Kim | 2023-11-29 | Developing | |
