Id |
Subject |
Object |
Predicate |
Lexical cue |
TextSentencer_T1 |
0-71 |
Sentence |
denotes |
Structure and promoter activity of the LpS1 genes of Lytechinus pictus. |
T1 |
0-71 |
Sentence |
denotes |
Structure and promoter activity of the LpS1 genes of Lytechinus pictus. |
TextSentencer_T2 |
72-150 |
Sentence |
denotes |
Duplicated exons account for LpS1 proteins with eight calcium binding domains. |
T2 |
72-150 |
Sentence |
denotes |
Duplicated exons account for LpS1 proteins with eight calcium binding domains. |
TextSentencer_T3 |
151-262 |
Sentence |
denotes |
The LpS1 genes of the sea urchin Lytechinus pictus are activated early in development in aboral ectoderm cells. |
T3 |
151-262 |
Sentence |
denotes |
The LpS1 genes of the sea urchin Lytechinus pictus are activated early in development in aboral ectoderm cells. |
TextSentencer_T4 |
263-383 |
Sentence |
denotes |
They therefore have ontogenic properties similar to their counterparts in Stronglyocentrotus purpuratus, the Spec genes. |
T4 |
263-383 |
Sentence |
denotes |
They therefore have ontogenic properties similar to their counterparts in Stronglyocentrotus purpuratus, the Spec genes. |
TextSentencer_T5 |
384-535 |
Sentence |
denotes |
Both gene families encode proteins belonging to the calmodulin superfamily as evidenced by the presence of distinct EF-hand (helix-loop-helix) domains. |
T5 |
384-535 |
Sentence |
denotes |
Both gene families encode proteins belonging to the calmodulin superfamily as evidenced by the presence of distinct EF-hand (helix-loop-helix) domains. |
TextSentencer_T6 |
536-676 |
Sentence |
denotes |
The presence of eight EF-hand domains in LpS1 proteins suggests that the LpS1 genes arose from a duplication of an ancestral Spec-like gene. |
T6 |
536-676 |
Sentence |
denotes |
The presence of eight EF-hand domains in LpS1 proteins suggests that the LpS1 genes arose from a duplication of an ancestral Spec-like gene. |
TextSentencer_T7 |
677-829 |
Sentence |
denotes |
The LpS1 genes were further analyzed to increase our understanding of the mechanisms underlying their evolution and activation in aboral ectoderm cells. |
T7 |
677-829 |
Sentence |
denotes |
The LpS1 genes were further analyzed to increase our understanding of the mechanisms underlying their evolution and activation in aboral ectoderm cells. |
TextSentencer_T8 |
830-947 |
Sentence |
denotes |
Genomic DNA blot analysis showed two LpS1 genes, LpS1 alpha and LpS1 beta, which did not appear to be closely linked. |
T8 |
830-947 |
Sentence |
denotes |
Genomic DNA blot analysis showed two LpS1 genes, LpS1 alpha and LpS1 beta, which did not appear to be closely linked. |
TextSentencer_T9 |
948-1128 |
Sentence |
denotes |
LpS1 genomic clones were isolated by screening an L. pictus genomic library with an LpS1 cDNA clone, and partial gene structures for both LpS1 alpha and LpS1 beta were constructed. |
T9 |
948-1128 |
Sentence |
denotes |
LpS1 genomic clones were isolated by screening an L. pictus genomic library with an LpS1 cDNA clone, and partial gene structures for both LpS1 alpha and LpS1 beta were constructed. |
TextSentencer_T10 |
1129-1249 |
Sentence |
denotes |
These revealed internal duplication of the LpS1 genes that accounted for the eight EF-hand domains in the LpS1 proteins. |
T10 |
1129-1249 |
Sentence |
denotes |
These revealed internal duplication of the LpS1 genes that accounted for the eight EF-hand domains in the LpS1 proteins. |
TextSentencer_T11 |
1250-1362 |
Sentence |
denotes |
Duplication of exon 1 in both genes suggested four different LpS1 proteins could be derived from the LpS1 genes. |
T11 |
1250-1362 |
Sentence |
denotes |
Duplication of exon 1 in both genes suggested four different LpS1 proteins could be derived from the LpS1 genes. |
TextSentencer_T12 |
1363-1632 |
Sentence |
denotes |
Primer extension to map the transcriptional initiation sites of the LpS1 genes and sequencing analysis showed there was little in common among the 5'-flanking regions of the LpS1 and Spec genes except for the presence of a binding site for the transcription factor USF. |
T12 |
1363-1632 |
Sentence |
denotes |
Primer extension to map the transcriptional initiation sites of the LpS1 genes and sequencing analysis showed there was little in common among the 5'-flanking regions of the LpS1 and Spec genes except for the presence of a binding site for the transcription factor USF. |
TextSentencer_T13 |
1633-1939 |
Sentence |
denotes |
A sea urchin gene-transfer expression system showed that 762 base pairs (bp) of 5'-flanking DNA and 17 bp of 5'-untranslated leader sequence of the LpS1 beta gene were sufficient for correct temporal and spatial expression of reporter chloramphenicol acetyltransferase and lacZ genes in sea urchin embryos. |
T13 |
1633-1939 |
Sentence |
denotes |
A sea urchin gene-transfer expression system showed that 762 base pairs (bp) of 5'-flanking DNA and 17 bp of 5'-untranslated leader sequence of the LpS1 beta gene were sufficient for correct temporal and spatial expression of reporter chloramphenicol acetyltransferase and lacZ genes in sea urchin embryos. |
TextSentencer_T14 |
1940-2149 |
Sentence |
denotes |
Deletions at the 5' end to either 511 or 368 bp resulted in a 3-4 fold decrease in chloramphenicol acetyltransferase activity and disrupted the exclusive activation of the lacZ gene in aboral ectodermal cells. |
T14 |
1940-2149 |
Sentence |
denotes |
Deletions at the 5' end to either 511 or 368 bp resulted in a 3-4 fold decrease in chloramphenicol acetyltransferase activity and disrupted the exclusive activation of the lacZ gene in aboral ectodermal cells. |
TextSentencer_T15 |
2150-2349 |
Sentence |
denotes |
Based on a lineage analysis among the LpS1 and Spec gene families and other related genes, we propose a model in which LpS1 genes evolved from a series of duplications of an ancestral Spec-like gene. |
T15 |
2150-2349 |
Sentence |
denotes |
Based on a lineage analysis among the LpS1 and Spec gene families and other related genes, we propose a model in which LpS1 genes evolved from a series of duplications of an ancestral Spec-like gene. |