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PubMed:1822243 JSONTXT 57 Projects

Annnotations TAB TSV DIC JSON TextAE Lectin_function IAV-Glycan

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-57 Sentence denotes Molecular modelling of protein-carbohydrate interactions.
T1 0-57 Sentence denotes Molecular modelling of protein-carbohydrate interactions.
T1 0-57 Sentence denotes Molecular modelling of protein-carbohydrate interactions.
TextSentencer_T2 58-123 Sentence denotes Docking of monosaccharides in the binding site of concanavalin A.
T2 58-123 Sentence denotes Docking of monosaccharides in the binding site of concanavalin A.
T2 58-123 Sentence denotes Docking of monosaccharides in the binding site of concanavalin A.
TextSentencer_T3 124-233 Sentence denotes A general procedure is described for addressing the computer simulation of protein-carbohydrate interactions.
T3 124-233 Sentence denotes A general procedure is described for addressing the computer simulation of protein-carbohydrate interactions.
T3 124-233 Sentence denotes A general procedure is described for addressing the computer simulation of protein-carbohydrate interactions.
TextSentencer_T4 234-473 Sentence denotes First, a molecular mechanical force field capable of performing conformational analysis of oligosaccharides has been derived by the addition of new parameters to the Tripos force field; it is also compatible with the simulation of protein.
T4 234-473 Sentence denotes First, a molecular mechanical force field capable of performing conformational analysis of oligosaccharides has been derived by the addition of new parameters to the Tripos force field; it is also compatible with the simulation of protein.
T4 234-473 Sentence denotes First, a molecular mechanical force field capable of performing conformational analysis of oligosaccharides has been derived by the addition of new parameters to the Tripos force field; it is also compatible with the simulation of protein.
TextSentencer_T5 474-630 Sentence denotes Second, a docking procedure which allows for a systematic exploration of the orientations and positions of a ligand into a protein cavity has been designed.
T5 474-630 Sentence denotes Second, a docking procedure which allows for a systematic exploration of the orientations and positions of a ligand into a protein cavity has been designed.
T5 474-630 Sentence denotes Second, a docking procedure which allows for a systematic exploration of the orientations and positions of a ligand into a protein cavity has been designed.
TextSentencer_T6 631-787 Sentence denotes This so-called 'crankshaft' method uses rotations and variations about/of virtual bonds connecting, via dummy atoms, the ligand to the protein binding site.
T6 631-787 Sentence denotes This so-called 'crankshaft' method uses rotations and variations about/of virtual bonds connecting, via dummy atoms, the ligand to the protein binding site.
T6 631-787 Sentence denotes This so-called 'crankshaft' method uses rotations and variations about/of virtual bonds connecting, via dummy atoms, the ligand to the protein binding site.
TextSentencer_T7 788-874 Sentence denotes Third, calculation of the relative stability of protein ligand complexes is performed.
T7 788-874 Sentence denotes Third, calculation of the relative stability of protein ligand complexes is performed.
T7 788-874 Sentence denotes Third, calculation of the relative stability of protein ligand complexes is performed.
TextSentencer_T8 875-1068 Sentence denotes This strategy has been applied to search for all favourable interactions occurring between a lectin [concanavalin A (ConA)] and methyl alpha-D-mannopyranoside or methyl alpha-D-glucopyranoside.
T8 875-1068 Sentence denotes This strategy has been applied to search for all favourable interactions occurring between a lectin [concanavalin A (ConA)] and methyl alpha-D-mannopyranoside or methyl alpha-D-glucopyranoside.
T8 875-1068 Sentence denotes This strategy has been applied to search for all favourable interactions occurring between a lectin [concanavalin A (ConA)] and methyl alpha-D-mannopyranoside or methyl alpha-D-glucopyranoside.
TextSentencer_T9 1069-1183 Sentence denotes For each monosaccharide, different stable orientations and positions within the binding site can be distinguished.
T9 1069-1183 Sentence denotes For each monosaccharide, different stable orientations and positions within the binding site can be distinguished.
T9 1069-1183 Sentence denotes For each monosaccharide, different stable orientations and positions within the binding site can be distinguished.
TextSentencer_T10 1184-1332 Sentence denotes Among them, one corresponds to very favourable interactions, not only in terms of hydrogen bonding, but also in terms of van der Waals interactions.
T10 1184-1332 Sentence denotes Among them, one corresponds to very favourable interactions, not only in terms of hydrogen bonding, but also in terms of van der Waals interactions.
T10 1184-1332 Sentence denotes Among them, one corresponds to very favourable interactions, not only in terms of hydrogen bonding, but also in terms of van der Waals interactions.
TextSentencer_T11 1333-1510 Sentence denotes It corresponds precisely to the binding mode of methyl alpha-D-mannopyranoside into ConA as revealed by the 2.9 A resolution of the crystalline complex (Derewenda et al., 1989).
T11 1333-1510 Sentence denotes It corresponds precisely to the binding mode of methyl alpha-D-mannopyranoside into ConA as revealed by the 2.9 A resolution of the crystalline complex (Derewenda et al., 1989).
T11 1333-1510 Sentence denotes It corresponds precisely to the binding mode of methyl alpha-D-mannopyranoside into ConA as revealed by the 2.9 A resolution of the crystalline complex (Derewenda et al., 1989).
TextSentencer_T12 1511-1688 Sentence denotes Some implications of the present modelling study with respect to the molecular basis of the specificity of the interaction of lectins with various monosaccharides are presented.
T12 1511-1688 Sentence denotes Some implications of the present modelling study with respect to the molecular basis of the specificity of the interaction of lectins with various monosaccharides are presented.
T12 1511-1688 Sentence denotes Some implications of the present modelling study with respect to the molecular basis of the specificity of the interaction of lectins with various monosaccharides are presented.