> top > projects > sentences > docs > PubMed:1351413 > annotations
sentences Home  

PubMed:1351413 JSONTXT 61 Projects

Annnotations TAB TSV DIC JSON TextAE Lectin_function IAV-Glycan

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-147 Sentence denotes Application of restrained minimization, simulated annealing and molecular dynamics simulations for the conformational analysis of oligosaccharides.
T1 0-147 Sentence denotes Application of restrained minimization, simulated annealing and molecular dynamics simulations for the conformational analysis of oligosaccharides.
T1 0-147 Sentence denotes Application of restrained minimization, simulated annealing and molecular dynamics simulations for the conformational analysis of oligosaccharides.
TextSentencer_T2 148-413 Sentence denotes The purpose of the present study was to determine the confidence with which the small number of 1H NMR nuclear Overhauser effect (NOE) distance constraints measurable across glycosidic linkages in oligosaccharides could be used for solution conformational analysis.
T2 148-413 Sentence denotes The purpose of the present study was to determine the confidence with which the small number of 1H NMR nuclear Overhauser effect (NOE) distance constraints measurable across glycosidic linkages in oligosaccharides could be used for solution conformational analysis.
T2 148-413 Sentence denotes The purpose of the present study was to determine the confidence with which the small number of 1H NMR nuclear Overhauser effect (NOE) distance constraints measurable across glycosidic linkages in oligosaccharides could be used for solution conformational analysis.
TextSentencer_T3 414-642 Sentence denotes This was assessed by use of these constraints in restrained molecular mechanical minimization of the tetrasaccharide Gal beta 1----4(Fuc alpha 1----3)Glc-NAc beta 1----3Gal, a model compound of the Lewis-X antigenic determinant.
T3 414-642 Sentence denotes This was assessed by use of these constraints in restrained molecular mechanical minimization of the tetrasaccharide Gal beta 1----4(Fuc alpha 1----3)Glc-NAc beta 1----3Gal, a model compound of the Lewis-X antigenic determinant.
T3 414-642 Sentence denotes This was assessed by use of these constraints in restrained molecular mechanical minimization of the tetrasaccharide Gal beta 1----4(Fuc alpha 1----3)Glc-NAc beta 1----3Gal, a model compound of the Lewis-X antigenic determinant.
TextSentencer_T4 643-777 Sentence denotes This presents a particularly severe test case in view of extreme resonance overlap and a dearth of inter-residue distance constraints.
T4 643-777 Sentence denotes This presents a particularly severe test case in view of extreme resonance overlap and a dearth of inter-residue distance constraints.
T4 643-777 Sentence denotes This presents a particularly severe test case in view of extreme resonance overlap and a dearth of inter-residue distance constraints.
TextSentencer_T5 778-964 Sentence denotes It is concluded that these constraints, when used in conventional restrained minimization, result in the generation of 'virtual conformations' and local minima about glycosidic linkages.
T5 778-964 Sentence denotes It is concluded that these constraints, when used in conventional restrained minimization, result in the generation of 'virtual conformations' and local minima about glycosidic linkages.
T5 778-964 Sentence denotes It is concluded that these constraints, when used in conventional restrained minimization, result in the generation of 'virtual conformations' and local minima about glycosidic linkages.
TextSentencer_T6 965-1330 Sentence denotes However, these restraints are nevertheless found to be useful in the initial stages of a conformational analysis strategy involving restrained minimization combined with dynamical simulated annealing to define more accurately the global minimum energy configuration, together with molecular dynamics simulation to explore conformational mobility about this minimum.
T6 965-1330 Sentence denotes However, these restraints are nevertheless found to be useful in the initial stages of a conformational analysis strategy involving restrained minimization combined with dynamical simulated annealing to define more accurately the global minimum energy configuration, together with molecular dynamics simulation to explore conformational mobility about this minimum.
T6 965-1330 Sentence denotes However, these restraints are nevertheless found to be useful in the initial stages of a conformational analysis strategy involving restrained minimization combined with dynamical simulated annealing to define more accurately the global minimum energy configuration, together with molecular dynamics simulation to explore conformational mobility about this minimum.
TextSentencer_T7 1331-1552 Sentence denotes Theoretical ROE values calculated over the time course of the MD simulation, using a formalism appropriate for the time scale of the internal motion, are compared with those obtained experimentally in the oligosaccharide.
T7 1331-1552 Sentence denotes Theoretical ROE values calculated over the time course of the MD simulation, using a formalism appropriate for the time scale of the internal motion, are compared with those obtained experimentally in the oligosaccharide.
T7 1331-1552 Sentence denotes Theoretical ROE values calculated over the time course of the MD simulation, using a formalism appropriate for the time scale of the internal motion, are compared with those obtained experimentally in the oligosaccharide.