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PMC:539297 / 7812-8305 JSONTXT 4 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T8215 0-2 NN denotes RT
T8217 2-3 HYPH denotes -
T8216 3-6 NN denotes PCR
T8219 7-9 IN denotes of
T8220 10-14 NN denotes Cln3
T8221 15-19 NN denotes mRNA
T8222 20-22 IN denotes in
T8223 23-27 JJ denotes wild
T8225 27-28 HYPH denotes -
T8224 28-32 NN denotes type
T8227 33-36 CC denotes and
T8228 37-47 JJ denotes homozygous
T8229 48-58 NN denotes CbCln3Δex7
T8230 58-59 HYPH denotes /
T8231 59-60 CD denotes 8
T8226 61-66 NNS denotes cells
T8232 67-71 NN denotes Cln3
T8234 72-77 NN denotes Exon1
T8236 77-78 HYPH denotes -
T8235 78-85 JJ denotes forward
T8238 85-87 , denotes ,
T8239 87-91 NN denotes Exon
T8240 92-94 CD denotes 15
T8241 94-95 HYPH denotes -
T8237 95-102 JJ denotes reverse
T8242 103-105 NN denotes RT
T8244 105-106 HYPH denotes -
T8243 106-109 NN denotes PCR
T8233 110-118 NNS denotes products
T8245 119-122 VBP denotes are
T8218 123-128 VBN denotes shown
T8246 128-130 , denotes ,
T8247 130-134 IN denotes from
T8248 135-140 JJ denotes total
T8250 141-145 JJ denotes wild
T8252 145-146 HYPH denotes -
T8251 146-150 NN denotes type
T8253 151-152 -LRB- denotes (
T8254 152-153 SYM denotes +
T8256 153-154 HYPH denotes /
T8255 154-155 SYM denotes +
T8257 155-156 -RRB- denotes )
T8258 157-159 CC denotes or
T8259 160-170 JJ denotes homozygous
T8260 171-177 NN denotes mutant
T8261 178-179 -LRB- denotes (
T8262 179-183 NN denotes Δex7
T8263 183-184 HYPH denotes /
T8264 184-185 CD denotes 8
T8265 185-186 HYPH denotes /
T8266 186-190 NN denotes Δex7
T8267 190-191 HYPH denotes /
T8268 191-192 CD denotes 8
T8269 192-193 -RRB- denotes )
T8270 194-199 NN denotes brain
T8271 200-203 CC denotes and
T8272 204-208 NN denotes cell
T8273 209-213 NN denotes line
T8249 214-217 NN denotes RNA
T8274 217-218 . denotes .
T8275 218-333 sentence denotes Brain and cell line RT-PCR reaction products had identical band patterns on ethidium-bromide stained agarose gels.
T8276 219-224 NN denotes Brain
T8278 225-228 CC denotes and
T8279 229-233 NN denotes cell
T8280 234-238 NN denotes line
T8281 239-241 NN denotes RT
T8283 241-242 HYPH denotes -
T8282 242-245 NN denotes PCR
T8284 246-254 NN denotes reaction
T8277 255-263 NNS denotes products
T8285 264-267 VBD denotes had
T8286 268-277 JJ denotes identical
T8288 278-282 NN denotes band
T8287 283-291 NNS denotes patterns
T8289 292-294 IN denotes on
T8290 295-303 NN denotes ethidium
T8292 303-304 HYPH denotes -
T8291 304-311 NN denotes bromide
T8293 312-319 VBN denotes stained
T8295 320-327 NN denotes agarose
T8294 328-332 NNS denotes gels
T8296 332-333 . denotes .
T8297 333-493 sentence denotes Wild-type RT-PCR product was a single ~1.6 kb band and mutant products were ~1.6, ~1.5, ~1.4, ~1.35, and ~1.3 kb, representing multiple mutant splice variants.
T8298 334-338 JJ denotes Wild
T8300 338-339 HYPH denotes -
T8299 339-343 NN denotes type
T8302 344-346 NN denotes RT
T8304 346-347 HYPH denotes -
T8303 347-350 NN denotes PCR
T8301 351-358 NN denotes product
T8305 359-362 VBD denotes was
T8306 363-364 DT denotes a
T8308 365-371 JJ denotes single
T8309 372-373 SYM denotes ~
T8310 373-376 CD denotes 1.6
T8311 377-379 NN denotes kb
T8307 380-384 NN denotes band
T8312 385-388 CC denotes and
T8313 389-395 NN denotes mutant
T8314 396-404 NNS denotes products
T8315 405-409 VBD denotes were
T8316 410-411 SYM denotes ~
T8317 411-414 CD denotes 1.6
T8319 414-416 , denotes ,
T8320 416-417 SYM denotes ~
T8321 417-420 CD denotes 1.5
T8322 420-422 , denotes ,
T8323 422-423 SYM denotes ~
T8324 423-426 CD denotes 1.4
T8325 426-428 , denotes ,
T8326 428-429 SYM denotes ~
T8327 429-433 CD denotes 1.35
T8328 433-435 , denotes ,
T8329 435-438 CC denotes and
T8330 439-440 SYM denotes ~
T8331 440-443 NN denotes 1.3
T8318 444-446 NN denotes kb
T8332 446-448 , denotes ,
T8333 448-460 VBG denotes representing
T8334 461-469 JJ denotes multiple
T8336 470-476 NN denotes mutant
T8337 477-483 NN denotes splice
T8335 484-492 NNS denotes variants
T8338 492-493 . denotes .
R5202 T8215 T8216 compound RT,PCR
R5203 T8216 T8218 dep PCR,shown
R5204 T8217 T8216 punct -,PCR
R5205 T8219 T8216 prep of,PCR
R5206 T8220 T8221 compound Cln3,mRNA
R5207 T8221 T8219 pobj mRNA,of
R5208 T8222 T8216 prep in,PCR
R5209 T8223 T8224 amod wild,type
R5210 T8224 T8226 nmod type,cells
R5211 T8225 T8224 punct -,type
R5212 T8226 T8222 pobj cells,in
R5213 T8227 T8224 cc and,type
R5214 T8228 T8224 conj homozygous,type
R5215 T8229 T8226 nmod CbCln3Δex7,cells
R5216 T8230 T8229 punct /,CbCln3Δex7
R5217 T8231 T8229 nummod 8,CbCln3Δex7
R5218 T8232 T8233 nmod Cln3,products
R5219 T8233 T8218 nsubjpass products,shown
R5220 T8234 T8235 npadvmod Exon1,forward
R5221 T8235 T8237 amod forward,reverse
R5222 T8236 T8235 punct -,forward
R5223 T8237 T8233 nmod reverse,products
R5224 T8238 T8237 punct ", ",reverse
R5225 T8239 T8237 npadvmod Exon,reverse
R5226 T8240 T8239 nummod 15,Exon
R5227 T8241 T8237 punct -,reverse
R5228 T8242 T8243 compound RT,PCR
R5229 T8243 T8233 compound PCR,products
R5230 T8244 T8243 punct -,PCR
R5231 T8245 T8218 auxpass are,shown
R5232 T8246 T8218 punct ", ",shown
R5233 T8247 T8218 prep from,shown
R5234 T8248 T8249 amod total,RNA
R5235 T8249 T8247 pobj RNA,from
R5236 T8250 T8251 amod wild,type
R5237 T8251 T8249 nmod type,RNA
R5238 T8252 T8251 punct -,type
R5239 T8253 T8251 punct (,type
R5240 T8254 T8255 punct +,+
R5241 T8255 T8251 appos +,type
R5242 T8256 T8255 punct /,+
R5243 T8257 T8251 punct ),type
R5244 T8258 T8251 cc or,type
R5245 T8259 T8260 amod homozygous,mutant
R5246 T8260 T8251 conj mutant,type
R5247 T8261 T8260 punct (,mutant
R5248 T8262 T8260 appos Δex7,mutant
R5249 T8263 T8262 punct /,Δex7
R5250 T8264 T8262 nummod 8,Δex7
R5251 T8265 T8262 punct /,Δex7
R5252 T8266 T8262 appos Δex7,Δex7
R5253 T8267 T8266 punct /,Δex7
R5254 T8268 T8266 nummod 8,Δex7
R5255 T8269 T8249 punct ),RNA
R5256 T8270 T8249 nmod brain,RNA
R5257 T8271 T8270 cc and,brain
R5258 T8272 T8273 compound cell,line
R5259 T8273 T8270 conj line,brain
R5260 T8274 T8218 punct .,shown
R5261 T8276 T8277 nmod Brain,products
R5262 T8277 T8285 nsubj products,had
R5263 T8278 T8276 cc and,Brain
R5264 T8279 T8280 compound cell,line
R5265 T8280 T8276 conj line,Brain
R5266 T8281 T8282 compound RT,PCR
R5267 T8282 T8277 compound PCR,products
R5268 T8283 T8282 punct -,PCR
R5269 T8284 T8277 compound reaction,products
R5270 T8286 T8287 amod identical,patterns
R5271 T8287 T8285 dobj patterns,had
R5272 T8288 T8287 compound band,patterns
R5273 T8289 T8285 prep on,had
R5274 T8290 T8291 compound ethidium,bromide
R5275 T8291 T8293 npadvmod bromide,stained
R5276 T8292 T8291 punct -,bromide
R5277 T8293 T8294 amod stained,gels
R5278 T8294 T8289 pobj gels,on
R5279 T8295 T8294 compound agarose,gels
R5280 T8296 T8285 punct .,had
R5281 T8298 T8299 amod Wild,type
R5282 T8299 T8301 compound type,product
R5283 T8300 T8299 punct -,type
R5284 T8301 T8305 nsubj product,was
R5285 T8302 T8303 compound RT,PCR
R5286 T8303 T8301 compound PCR,product
R5287 T8304 T8303 punct -,PCR
R5288 T8306 T8307 det a,band
R5289 T8307 T8305 attr band,was
R5290 T8308 T8307 amod single,band
R5291 T8309 T8310 punct ~,1.6
R5292 T8310 T8311 nummod 1.6,kb
R5293 T8311 T8307 compound kb,band
R5294 T8312 T8305 cc and,was
R5295 T8313 T8314 compound mutant,products
R5296 T8314 T8315 nsubj products,were
R5297 T8315 T8305 conj were,was
R5298 T8316 T8317 punct ~,1.6
R5299 T8317 T8318 nummod 1.6,kb
R5300 T8318 T8315 attr kb,were
R5301 T8319 T8317 punct ", ",1.6
R5302 T8320 T8321 punct ~,1.5
R5303 T8321 T8317 conj 1.5,1.6
R5304 T8322 T8321 punct ", ",1.5
R5305 T8323 T8324 punct ~,1.4
R5306 T8324 T8321 conj 1.4,1.5
R5307 T8325 T8324 punct ", ",1.4
R5308 T8326 T8327 punct ~,1.35
R5309 T8327 T8324 conj 1.35,1.4
R5310 T8328 T8327 punct ", ",1.35
R5311 T8329 T8327 cc and,1.35
R5312 T8330 T8331 punct ~,1.3
R5313 T8331 T8327 conj 1.3,1.35
R5314 T8332 T8315 punct ", ",were
R5315 T8333 T8315 advcl representing,were
R5316 T8334 T8335 amod multiple,variants
R5317 T8335 T8333 dobj variants,representing
R5318 T8336 T8337 compound mutant,splice
R5319 T8337 T8335 compound splice,variants
R5320 T8338 T8315 punct .,were