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PMC:523229 / 37020-37991 JSONTXT 4 Projects

Annnotations TAB TSV DIC JSON TextAE Lectin_function IAV-Glycan

Id Subject Object Predicate Lexical cue
T7697 0-3 DT denotes The
T7699 4-9 JJ denotes major
T7700 10-16 NN denotes weight
T7701 16-17 HYPH denotes -
T7702 17-24 VBG denotes bearing
T7698 25-30 NN denotes joint
T7704 31-33 IN denotes of
T7705 34-37 DT denotes the
T7706 38-46 NN denotes hindlimb
T7707 46-48 , denotes ,
T7708 48-51 DT denotes the
T7709 52-56 NN denotes knee
T7710 56-58 , denotes ,
T7703 58-64 VBD denotes showed
T7711 65-72 NNS denotes changes
T7712 73-77 WDT denotes that
T7714 78-85 RB denotes closely
T7713 86-96 VBD denotes paralleled
T7715 97-101 DT denotes that
T7716 102-106 VBN denotes seen
T7717 107-109 IN denotes in
T7718 110-113 DT denotes the
T7720 114-118 NN denotes foot
T7719 119-125 NNS denotes joints
T7721 125-126 . denotes .
T7722 126-282 sentence denotes All markers of cartilage matrix looked similar to controls at E16.5, suggesting that early stages of joint formation were not disrupted (unpublished data).
T7723 127-130 DT denotes All
T7724 131-138 NNS denotes markers
T7726 139-141 IN denotes of
T7727 142-151 NN denotes cartilage
T7728 152-158 NN denotes matrix
T7725 159-165 VBD denotes looked
T7729 166-173 JJ denotes similar
T7730 174-176 IN denotes to
T7731 177-185 NNS denotes controls
T7732 186-188 IN denotes at
T7733 189-194 NN denotes E16.5
T7734 194-196 , denotes ,
T7735 196-206 VBG denotes suggesting
T7736 207-211 IN denotes that
T7738 212-217 JJ denotes early
T7739 218-224 NNS denotes stages
T7740 225-227 IN denotes of
T7741 228-233 NN denotes joint
T7742 234-243 NN denotes formation
T7743 244-248 VBD denotes were
T7744 249-252 RB denotes not
T7737 253-262 VBN denotes disrupted
T7745 263-264 -LRB- denotes (
T7747 264-275 JJ denotes unpublished
T7746 276-280 NNS denotes data
T7748 280-281 -RRB- denotes )
T7749 281-282 . denotes .
T7750 282-445 sentence denotes By postnatal day 7, Safranin O staining and Col2a1 and Agg expression were clearly reduced in the mutant, despite continued expression of Sox9 (unpublished data).
T7751 283-285 IN denotes By
T7753 286-295 JJ denotes postnatal
T7754 296-299 NN denotes day
T7755 300-301 CD denotes 7
T7756 301-303 , denotes ,
T7757 303-311 NN denotes Safranin
T7758 312-313 NN denotes O
T7759 314-322 NN denotes staining
T7760 323-326 CC denotes and
T7761 327-333 NN denotes Col2a1
T7763 334-337 CC denotes and
T7764 338-341 NN denotes Agg
T7762 342-352 NN denotes expression
T7765 353-357 VBD denotes were
T7766 358-365 RB denotes clearly
T7752 366-373 VBN denotes reduced
T7767 374-376 IN denotes in
T7768 377-380 DT denotes the
T7769 381-387 NN denotes mutant
T7770 387-389 , denotes ,
T7771 389-396 IN denotes despite
T7772 397-406 VBN denotes continued
T7773 407-417 NN denotes expression
T7774 418-420 IN denotes of
T7775 421-425 NN denotes Sox9
T7776 426-427 -LRB- denotes (
T7778 427-438 JJ denotes unpublished
T7777 439-443 NNS denotes data
T7779 443-444 -RRB- denotes )
T7780 444-445 . denotes .
T7781 445-654 sentence denotes The overall shape of mutant knee skeletal elements appeared similar to controls, although the fibrocartilaginous meniscus that resides between the femur and tibia appeared much less dense in mutants at E16.5.
T7782 446-449 DT denotes The
T7784 450-457 JJ denotes overall
T7783 458-463 NN denotes shape
T7786 464-466 IN denotes of
T7787 467-473 NN denotes mutant
T7788 474-478 NN denotes knee
T7790 479-487 JJ denotes skeletal
T7789 488-496 NNS denotes elements
T7785 497-505 VBD denotes appeared
T7791 506-513 JJ denotes similar
T7792 514-516 IN denotes to
T7793 517-525 NNS denotes controls
T7794 525-527 , denotes ,
T7795 527-535 IN denotes although
T7797 536-539 DT denotes the
T7799 540-558 NN denotes fibrocartilaginous
T7798 559-567 NN denotes meniscus
T7800 568-572 WDT denotes that
T7801 573-580 VBZ denotes resides
T7802 581-588 IN denotes between
T7803 589-592 DT denotes the
T7804 593-598 NN denotes femur
T7805 599-602 CC denotes and
T7806 603-608 NN denotes tibia
T7796 609-617 VBD denotes appeared
T7807 618-622 RB denotes much
T7808 623-627 RBR denotes less
T7809 628-633 JJ denotes dense
T7810 634-636 IN denotes in
T7811 637-644 NNS denotes mutants
T7812 645-647 IN denotes at
T7813 648-653 NN denotes E16.5
T7814 653-654 . denotes .
T7815 654-842 sentence denotes Some cartilage formed in the meniscus region, but the size of these elements was greatly reduced and contained abundant cells with fibrous, noncartilaginous appearance (unpublished data).
T7816 655-659 DT denotes Some
T7817 660-669 NN denotes cartilage
T7818 670-676 VBN denotes formed
T7819 677-679 IN denotes in
T7820 680-683 DT denotes the
T7822 684-692 NN denotes meniscus
T7821 693-699 NN denotes region
T7823 699-701 , denotes ,
T7824 701-704 CC denotes but
T7825 705-708 DT denotes the
T7826 709-713 NN denotes size
T7828 714-716 IN denotes of
T7829 717-722 DT denotes these
T7830 723-731 NNS denotes elements
T7831 732-735 VBD denotes was
T7832 736-743 RB denotes greatly
T7827 744-751 VBN denotes reduced
T7833 752-755 CC denotes and
T7834 756-765 VBN denotes contained
T7835 766-774 JJ denotes abundant
T7836 775-780 NNS denotes cells
T7837 781-785 IN denotes with
T7838 786-793 JJ denotes fibrous
T7840 793-795 , denotes ,
T7841 795-811 JJ denotes noncartilaginous
T7839 812-822 NN denotes appearance
T7842 823-824 -LRB- denotes (
T7844 824-835 JJ denotes unpublished
T7843 836-840 NNS denotes data
T7845 840-841 -RRB- denotes )
T7846 841-842 . denotes .
T7847 842-971 sentence denotes This reduction of the meniscus can also be seen in sections from 7-wk- and 9-mo-old animals (Figure 7E, 7H, 7K, and 7N, arrows).
T7848 843-847 DT denotes This
T7849 848-857 NN denotes reduction
T7851 858-860 IN denotes of
T7852 861-864 DT denotes the
T7853 865-873 NN denotes meniscus
T7854 874-877 MD denotes can
T7855 878-882 RB denotes also
T7856 883-885 VB denotes be
T7850 886-890 VBN denotes seen
T7857 891-893 IN denotes in
T7858 894-902 NNS denotes sections
T7859 903-907 IN denotes from
T7860 908-909 CD denotes 7
T7862 909-910 HYPH denotes -
T7861 910-912 NN denotes wk
T7864 912-913 HYPH denotes -
T7865 914-917 CC denotes and
T7866 918-919 CD denotes 9
T7868 919-920 HYPH denotes -
T7867 920-922 NN denotes mo
T7869 922-923 HYPH denotes -
T7863 923-926 JJ denotes old
T7870 927-934 NNS denotes animals
T7871 935-936 -LRB- denotes (
T7873 936-942 NN denotes Figure
T7874 943-945 CD denotes 7E
T7875 945-947 , denotes ,
T7876 947-949 CD denotes 7H
T7877 949-951 , denotes ,
T7878 951-953 CD denotes 7K
T7879 953-955 , denotes ,
T7880 955-958 CC denotes and
T7881 959-961 CD denotes 7N
T7882 961-963 , denotes ,
T7872 963-969 NNS denotes arrows
T7883 969-970 -RRB- denotes )
T7884 970-971 . denotes .
R4859 T7697 T7698 det The,joint
R4860 T7698 T7703 nsubj joint,showed
R4861 T7699 T7698 amod major,joint
R4862 T7700 T7698 nmod weight,joint
R4863 T7701 T7700 punct -,weight
R4864 T7702 T7700 amod bearing,weight
R4865 T7704 T7698 prep of,joint
R4866 T7705 T7706 det the,hindlimb
R4867 T7706 T7704 pobj hindlimb,of
R4868 T7707 T7698 punct ", ",joint
R4869 T7708 T7709 det the,knee
R4870 T7709 T7698 appos knee,joint
R4871 T7710 T7703 punct ", ",showed
R4872 T7711 T7703 dobj changes,showed
R4873 T7712 T7713 dep that,paralleled
R4874 T7713 T7711 relcl paralleled,changes
R4875 T7714 T7713 advmod closely,paralleled
R4876 T7715 T7713 dobj that,paralleled
R4877 T7716 T7715 acl seen,that
R4878 T7717 T7716 prep in,seen
R4879 T7718 T7719 det the,joints
R4880 T7719 T7717 pobj joints,in
R4881 T7720 T7719 compound foot,joints
R4882 T7721 T7703 punct .,showed
R4883 T7723 T7724 det All,markers
R4884 T7724 T7725 nsubj markers,looked
R4885 T7726 T7724 prep of,markers
R4886 T7727 T7728 compound cartilage,matrix
R4887 T7728 T7726 pobj matrix,of
R4888 T7729 T7725 acomp similar,looked
R4889 T7730 T7729 prep to,similar
R4890 T7731 T7730 pobj controls,to
R4891 T7732 T7725 prep at,looked
R4892 T7733 T7732 pobj E16.5,at
R4893 T7734 T7725 punct ", ",looked
R4894 T7735 T7725 advcl suggesting,looked
R4895 T7736 T7737 mark that,disrupted
R4896 T7737 T7735 ccomp disrupted,suggesting
R4897 T7738 T7739 amod early,stages
R4898 T7739 T7737 nsubjpass stages,disrupted
R4899 T7740 T7739 prep of,stages
R4900 T7741 T7742 compound joint,formation
R4901 T7742 T7740 pobj formation,of
R4902 T7743 T7737 auxpass were,disrupted
R4903 T7744 T7737 neg not,disrupted
R4904 T7745 T7746 punct (,data
R4905 T7746 T7725 meta data,looked
R4906 T7747 T7746 amod unpublished,data
R4907 T7748 T7746 punct ),data
R4908 T7749 T7725 punct .,looked
R4909 T7751 T7752 prep By,reduced
R4910 T7753 T7754 amod postnatal,day
R4911 T7754 T7751 pobj day,By
R4912 T7755 T7754 nummod 7,day
R4913 T7756 T7752 punct ", ",reduced
R4914 T7757 T7758 compound Safranin,O
R4915 T7758 T7759 compound O,staining
R4916 T7759 T7752 nsubjpass staining,reduced
R4917 T7760 T7759 cc and,staining
R4918 T7761 T7762 nmod Col2a1,expression
R4919 T7762 T7759 conj expression,staining
R4920 T7763 T7761 cc and,Col2a1
R4921 T7764 T7761 conj Agg,Col2a1
R4922 T7765 T7752 auxpass were,reduced
R4923 T7766 T7752 advmod clearly,reduced
R4924 T7767 T7752 prep in,reduced
R4925 T7768 T7769 det the,mutant
R4926 T7769 T7767 pobj mutant,in
R4927 T7770 T7752 punct ", ",reduced
R4928 T7771 T7752 prep despite,reduced
R4929 T7772 T7773 amod continued,expression
R4930 T7773 T7771 pobj expression,despite
R4931 T7774 T7773 prep of,expression
R4932 T7775 T7774 pobj Sox9,of
R4933 T7776 T7777 punct (,data
R4934 T7777 T7752 meta data,reduced
R4935 T7778 T7777 amod unpublished,data
R4936 T7779 T7777 punct ),data
R4937 T7780 T7752 punct .,reduced
R4938 T7782 T7783 det The,shape
R4939 T7783 T7785 nsubj shape,appeared
R4940 T7784 T7783 amod overall,shape
R4941 T7786 T7783 prep of,shape
R4942 T7787 T7788 nmod mutant,knee
R4943 T7788 T7789 nmod knee,elements
R4944 T7789 T7786 pobj elements,of
R4945 T7790 T7789 amod skeletal,elements
R4946 T7791 T7785 oprd similar,appeared
R4947 T7792 T7791 prep to,similar
R4948 T7793 T7792 pobj controls,to
R4949 T7794 T7785 punct ", ",appeared
R4950 T7795 T7796 mark although,appeared
R4951 T7796 T7785 advcl appeared,appeared
R4952 T7797 T7798 det the,meniscus
R4953 T7798 T7796 nsubj meniscus,appeared
R4954 T7799 T7798 compound fibrocartilaginous,meniscus
R4955 T7800 T7801 dep that,resides
R4956 T7801 T7798 relcl resides,meniscus
R4957 T7802 T7801 prep between,resides
R4958 T7803 T7804 det the,femur
R4959 T7804 T7802 pobj femur,between
R4960 T7805 T7804 cc and,femur
R4961 T7806 T7804 conj tibia,femur
R4962 T7807 T7808 advmod much,less
R4963 T7808 T7809 advmod less,dense
R4964 T7809 T7796 oprd dense,appeared
R4965 T7810 T7796 prep in,appeared
R4966 T7811 T7810 pobj mutants,in
R4967 T7812 T7796 prep at,appeared
R4968 T7813 T7812 pobj E16.5,at
R4969 T7814 T7785 punct .,appeared
R4970 T7816 T7817 det Some,cartilage
R4971 T7817 T7818 nsubj cartilage,formed
R4972 T7819 T7818 prep in,formed
R4973 T7820 T7821 det the,region
R4974 T7821 T7819 pobj region,in
R4975 T7822 T7821 compound meniscus,region
R4976 T7823 T7818 punct ", ",formed
R4977 T7824 T7818 cc but,formed
R4978 T7825 T7826 det the,size
R4979 T7826 T7827 nsubjpass size,reduced
R4980 T7827 T7818 conj reduced,formed
R4981 T7828 T7826 prep of,size
R4982 T7829 T7830 det these,elements
R4983 T7830 T7828 pobj elements,of
R4984 T7831 T7827 auxpass was,reduced
R4985 T7832 T7827 advmod greatly,reduced
R4986 T7833 T7827 cc and,reduced
R4987 T7834 T7827 conj contained,reduced
R4988 T7835 T7836 amod abundant,cells
R4989 T7836 T7834 dobj cells,contained
R4990 T7837 T7836 prep with,cells
R4991 T7838 T7839 amod fibrous,appearance
R4992 T7839 T7837 pobj appearance,with
R4993 T7840 T7839 punct ", ",appearance
R4994 T7841 T7839 amod noncartilaginous,appearance
R4995 T7842 T7843 punct (,data
R4996 T7843 T7834 meta data,contained
R4997 T7844 T7843 amod unpublished,data
R4998 T7845 T7843 punct ),data
R4999 T7846 T7827 punct .,reduced
R5000 T7848 T7849 det This,reduction
R5001 T7849 T7850 nsubjpass reduction,seen
R5002 T7851 T7849 prep of,reduction
R5003 T7852 T7853 det the,meniscus
R5004 T7853 T7851 pobj meniscus,of
R5005 T7854 T7850 aux can,seen
R5006 T7855 T7850 advmod also,seen
R5007 T7856 T7850 auxpass be,seen
R5008 T7857 T7850 prep in,seen
R5009 T7858 T7857 pobj sections,in
R5010 T7859 T7858 prep from,sections
R5011 T7860 T7861 nummod 7,wk
R5012 T7861 T7863 npadvmod wk,old
R5013 T7862 T7861 punct -,wk
R5014 T7863 T7870 amod old,animals
R5015 T7864 T7861 punct -,wk
R5016 T7865 T7861 cc and,wk
R5017 T7866 T7867 nummod 9,mo
R5018 T7867 T7861 conj mo,wk
R5019 T7868 T7867 punct -,mo
R5020 T7869 T7863 punct -,old
R5021 T7870 T7859 pobj animals,from
R5022 T7871 T7872 punct (,arrows
R5023 T7872 T7850 parataxis arrows,seen
R5024 T7873 T7872 dep Figure,arrows
R5025 T7874 T7873 nummod 7E,Figure
R5026 T7875 T7873 punct ", ",Figure
R5027 T7876 T7873 nummod 7H,Figure
R5028 T7877 T7873 punct ", ",Figure
R5029 T7878 T7873 nummod 7K,Figure
R5030 T7879 T7873 punct ", ",Figure
R5031 T7880 T7873 cc and,Figure
R5032 T7881 T7873 conj 7N,Figure
R5033 T7882 T7872 punct ", ",arrows
R5034 T7883 T7872 punct ),arrows
R5035 T7884 T7850 punct .,seen