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PMC:509305 / 38049-38727 JSONTXT 5 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T19159 0-7 NN denotes Linkage
T19160 8-16 NN denotes analysis
T19161 16-160 sentence denotes The QTL program MAPMANAGER.QTL (ftp://mcbio.med.buffalo.edu/pub/MapMgr/) was used, and the two experimental groups were examined independently.
T19162 17-20 DT denotes The
T19164 21-24 NN denotes QTL
T19163 25-32 NN denotes program
T19166 33-47 NNP denotes MAPMANAGER.QTL
T19167 48-49 -LRB- denotes (
T19168 49-88 NN denotes ftp://mcbio.med.buffalo.edu/pub/MapMgr/
T19169 88-89 -RRB- denotes )
T19170 90-93 VBD denotes was
T19165 94-98 VBN denotes used
T19171 98-100 , denotes ,
T19172 100-103 CC denotes and
T19173 104-107 DT denotes the
T19175 108-111 CD denotes two
T19176 112-124 JJ denotes experimental
T19174 125-131 NNS denotes groups
T19178 132-136 VBD denotes were
T19177 137-145 VBN denotes examined
T19179 146-159 RB denotes independently
T19180 159-160 . denotes .
T19181 160-211 sentence denotes Only data from mice at 12 mo of age were analysed.
T19182 161-165 RB denotes Only
T19183 166-170 NNS denotes data
T19185 171-175 IN denotes from
T19186 176-180 NNS denotes mice
T19187 181-183 IN denotes at
T19188 184-186 CD denotes 12
T19189 187-189 NN denotes mo
T19190 190-192 IN denotes of
T19191 193-196 NN denotes age
T19192 197-201 VBD denotes were
T19184 202-210 VBN denotes analysed
T19193 210-211 . denotes .
T19194 211-321 sentence denotes Log transformations of auto-Abs levels resulted in more normalised distribution and were used in QTL mapping.
T19195 212-215 NN denotes Log
T19196 216-231 NNS denotes transformations
T19198 232-234 IN denotes of
T19199 235-243 NNS denotes auto-Abs
T19200 244-250 NNS denotes levels
T19197 251-259 VBD denotes resulted
T19201 260-262 IN denotes in
T19202 263-267 RBR denotes more
T19203 268-278 VBN denotes normalised
T19204 279-291 NN denotes distribution
T19205 292-295 CC denotes and
T19206 296-300 VBD denotes were
T19207 301-305 VBN denotes used
T19208 306-308 IN denotes in
T19209 309-312 NN denotes QTL
T19210 313-320 NN denotes mapping
T19211 320-321 . denotes .
T19212 321-469 sentence denotes LOD thresholds for suggestive and significant linkages were determined by using a cohort- and trait-specific permutation test (1,000 permutations).
T19213 322-325 NN denotes LOD
T19214 326-336 NNS denotes thresholds
T19216 337-340 IN denotes for
T19217 341-351 JJ denotes suggestive
T19219 352-355 CC denotes and
T19220 356-367 JJ denotes significant
T19218 368-376 NNS denotes linkages
T19221 377-381 VBD denotes were
T19215 382-392 VBN denotes determined
T19222 393-395 IN denotes by
T19223 396-401 VBG denotes using
T19224 402-403 DT denotes a
T19226 404-410 NN denotes cohort
T19228 410-411 HYPH denotes -
T19229 412-415 CC denotes and
T19230 416-421 NN denotes trait
T19231 421-422 HYPH denotes -
T19227 422-430 JJ denotes specific
T19232 431-442 NN denotes permutation
T19225 443-447 NN denotes test
T19233 448-449 -LRB- denotes (
T19235 449-454 CD denotes 1,000
T19234 455-467 NNS denotes permutations
T19236 467-468 -RRB- denotes )
T19237 468-469 . denotes .
T19238 469-678 sentence denotes The average threshold for suggestive, significant, and highly significant linkages were LOD ≥ 2.1 (p ≤ 7.8 × 10−3), LOD ≥ 3.6 (p ≤ 2.4 × 10−4), and LOD ≥ 5 (p ≤ 1 × 10−5), respectively (Manly and Olson 1999).
T19239 470-473 DT denotes The
T19241 474-481 JJ denotes average
T19240 482-491 NN denotes threshold
T19243 492-495 IN denotes for
T19244 496-506 JJ denotes suggestive
T19246 506-508 , denotes ,
T19247 508-519 JJ denotes significant
T19248 519-521 , denotes ,
T19249 521-524 CC denotes and
T19250 525-531 RB denotes highly
T19251 532-543 JJ denotes significant
T19245 544-552 NNS denotes linkages
T19242 553-557 VBD denotes were
T19252 558-561 NN denotes LOD
T19253 562-563 SYM denotes ≥
T19254 564-567 CD denotes 2.1
T19255 568-569 -LRB- denotes (
T19257 569-570 NN denotes p
T19258 571-572 SYM denotes ≤
T19259 573-576 CD denotes 7.8
T19260 577-578 SYM denotes ×
T19261 579-581 CD denotes 10
T19262 581-582 SYM denotes −
T19256 582-583 CD denotes 3
T19263 583-584 -RRB- denotes )
T19264 584-586 , denotes ,
T19265 586-589 NN denotes LOD
T19266 590-591 SYM denotes ≥
T19267 592-595 CD denotes 3.6
T19268 596-597 -LRB- denotes (
T19270 597-598 NN denotes p
T19271 599-600 SYM denotes ≤
T19272 601-604 CD denotes 2.4
T19273 605-606 SYM denotes ×
T19274 607-609 CD denotes 10
T19275 609-610 SYM denotes −
T19269 610-611 CD denotes 4
T19276 611-612 -RRB- denotes )
T19277 612-614 , denotes ,
T19278 614-617 CC denotes and
T19279 618-621 NN denotes LOD
T19280 622-623 SYM denotes ≥
T19281 624-625 CD denotes 5
T19282 626-627 -LRB- denotes (
T19284 627-628 NN denotes p
T19285 629-630 SYM denotes ≤
T19286 631-632 CD denotes 1
T19287 633-634 SYM denotes ×
T19288 635-637 CD denotes 10
T19289 637-638 SYM denotes −
T19283 638-639 CD denotes 5
T19290 639-640 -RRB- denotes )
T19291 640-642 , denotes ,
T19292 642-654 RB denotes respectively
T19293 655-656 -LRB- denotes (
T19294 656-661 NNP denotes Manly
T19295 662-665 CC denotes and
T19296 666-671 NNP denotes Olson
T19297 672-676 CD denotes 1999
T19298 676-677 -RRB- denotes )
T19299 677-678 . denotes .
R6107 T19159 T19160 compound Linkage,analysis
R6108 T19162 T19163 det The,program
R6109 T19163 T19165 nsubjpass program,used
R6110 T19164 T19163 compound QTL,program
R6111 T19166 T19163 appos MAPMANAGER.QTL,program
R6112 T19167 T19168 punct (,ftp://mcbio.med.buffalo.edu/pub/MapMgr/
R6113 T19168 T19163 parataxis ftp://mcbio.med.buffalo.edu/pub/MapMgr/,program
R6114 T19169 T19168 punct ),ftp://mcbio.med.buffalo.edu/pub/MapMgr/
R6115 T19170 T19165 auxpass was,used
R6116 T19171 T19165 punct ", ",used
R6117 T19172 T19165 cc and,used
R6118 T19173 T19174 det the,groups
R6119 T19174 T19177 nsubjpass groups,examined
R6120 T19175 T19174 nummod two,groups
R6121 T19176 T19174 amod experimental,groups
R6122 T19177 T19165 conj examined,used
R6123 T19178 T19177 auxpass were,examined
R6124 T19179 T19177 advmod independently,examined
R6125 T19180 T19177 punct .,examined
R6126 T19182 T19183 advmod Only,data
R6127 T19183 T19184 nsubjpass data,analysed
R6128 T19185 T19183 prep from,data
R6129 T19186 T19185 pobj mice,from
R6130 T19187 T19186 prep at,mice
R6131 T19188 T19189 nummod 12,mo
R6132 T19189 T19187 pobj mo,at
R6133 T19190 T19189 prep of,mo
R6134 T19191 T19190 pobj age,of
R6135 T19192 T19184 auxpass were,analysed
R6136 T19193 T19184 punct .,analysed
R6137 T19195 T19196 compound Log,transformations
R6138 T19196 T19197 nsubj transformations,resulted
R6139 T19198 T19196 prep of,transformations
R6140 T19199 T19200 compound auto-Abs,levels
R6141 T19200 T19198 pobj levels,of
R6142 T19201 T19197 prep in,resulted
R6143 T19202 T19203 advmod more,normalised
R6144 T19203 T19204 amod normalised,distribution
R6145 T19204 T19201 pobj distribution,in
R6146 T19205 T19197 cc and,resulted
R6147 T19206 T19207 auxpass were,used
R6148 T19207 T19197 conj used,resulted
R6149 T19208 T19207 prep in,used
R6150 T19209 T19210 compound QTL,mapping
R6151 T19210 T19208 pobj mapping,in
R6152 T19211 T19197 punct .,resulted
R6153 T19213 T19214 compound LOD,thresholds
R6154 T19214 T19215 nsubjpass thresholds,determined
R6155 T19216 T19214 prep for,thresholds
R6156 T19217 T19218 amod suggestive,linkages
R6157 T19218 T19216 pobj linkages,for
R6158 T19219 T19217 cc and,suggestive
R6159 T19220 T19217 conj significant,suggestive
R6160 T19221 T19215 auxpass were,determined
R6161 T19222 T19215 prep by,determined
R6162 T19223 T19222 pcomp using,by
R6163 T19224 T19225 det a,test
R6164 T19225 T19223 dobj test,using
R6165 T19226 T19227 npadvmod cohort,specific
R6166 T19227 T19225 amod specific,test
R6167 T19228 T19226 punct -,cohort
R6168 T19229 T19226 cc and,cohort
R6169 T19230 T19226 conj trait,cohort
R6170 T19231 T19230 punct -,trait
R6171 T19232 T19225 compound permutation,test
R6172 T19233 T19234 punct (,permutations
R6173 T19234 T19225 parataxis permutations,test
R6174 T19235 T19234 nummod "1,000",permutations
R6175 T19236 T19234 punct ),permutations
R6176 T19237 T19215 punct .,determined
R6177 T19239 T19240 det The,threshold
R6178 T19240 T19242 nsubj threshold,were
R6179 T19241 T19240 amod average,threshold
R6180 T19243 T19240 prep for,threshold
R6181 T19244 T19245 amod suggestive,linkages
R6182 T19245 T19243 pobj linkages,for
R6183 T19246 T19244 punct ", ",suggestive
R6184 T19247 T19244 conj significant,suggestive
R6185 T19248 T19247 punct ", ",significant
R6186 T19249 T19247 cc and,significant
R6187 T19250 T19251 advmod highly,significant
R6188 T19251 T19247 conj significant,significant
R6189 T19252 T19242 attr LOD,were
R6190 T19253 T19254 punct ≥,2.1
R6191 T19254 T19252 amod 2.1,LOD
R6192 T19255 T19256 punct (,3
R6193 T19256 T19252 parataxis 3,LOD
R6194 T19257 T19256 nsubj p,3
R6195 T19258 T19256 punct ≤,3
R6196 T19259 T19256 quantmod 7.8,3
R6197 T19260 T19256 punct ×,3
R6198 T19261 T19256 quantmod 10,3
R6199 T19262 T19256 punct −,3
R6200 T19263 T19256 punct ),3
R6201 T19264 T19252 punct ", ",LOD
R6202 T19265 T19252 conj LOD,LOD
R6203 T19266 T19267 punct ≥,3.6
R6204 T19267 T19265 amod 3.6,LOD
R6205 T19268 T19269 punct (,4
R6206 T19269 T19265 parataxis 4,LOD
R6207 T19270 T19269 nsubj p,4
R6208 T19271 T19269 punct ≤,4
R6209 T19272 T19269 quantmod 2.4,4
R6210 T19273 T19269 punct ×,4
R6211 T19274 T19269 quantmod 10,4
R6212 T19275 T19269 punct −,4
R6213 T19276 T19269 punct ),4
R6214 T19277 T19265 punct ", ",LOD
R6215 T19278 T19265 cc and,LOD
R6216 T19279 T19265 conj LOD,LOD
R6217 T19280 T19281 punct ≥,5
R6218 T19281 T19279 amod 5,LOD
R6219 T19282 T19283 punct (,5
R6220 T19283 T19279 parataxis 5,LOD
R6221 T19284 T19283 nsubj p,5
R6222 T19285 T19283 punct ≤,5
R6223 T19286 T19283 quantmod 1,5
R6224 T19287 T19283 punct ×,5
R6225 T19288 T19283 quantmod 10,5
R6226 T19289 T19283 punct −,5
R6227 T19290 T19283 punct ),5
R6228 T19291 T19242 punct ", ",were
R6229 T19292 T19242 advmod respectively,were
R6230 T19293 T19294 punct (,Manly
R6231 T19294 T19242 meta Manly,were
R6232 T19295 T19294 cc and,Manly
R6233 T19296 T19294 conj Olson,Manly
R6234 T19297 T19296 nummod 1999,Olson
R6235 T19298 T19296 punct ),Olson
R6236 T19299 T19242 punct .,were