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PMC:1941754 / 6650-7418 JSONTXT 4 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T1421 0-3 DT denotes The
T1423 4-13 JJ denotes mammalian
T1422 14-22 NN denotes ortholog
T1425 23-25 IN denotes of
T1426 26-30 NN denotes PCH2
T1427 30-32 , denotes ,
T1428 32-38 NN denotes Trip13
T1429 39-40 -LRB- denotes (
T1430 40-47 NN denotes thyroid
T1432 48-55 NN denotes hormone
T1431 56-64 NN denotes receptor
T1433 65-76 VBG denotes interacting
T1434 77-84 NN denotes protein
T1435 85-87 CD denotes 13
T1436 87-88 -RRB- denotes )
T1437 88-90 , denotes ,
T1424 90-97 VBZ denotes encodes
T1438 98-99 DT denotes a
T1439 100-107 NN denotes protein
T1440 108-112 IN denotes with
T1441 113-122 JJ denotes extensive
T1443 123-128 NN denotes amino
T1444 129-133 NN denotes acid
T1442 134-142 NN denotes homology
T1445 143-145 IN denotes in
T1446 146-153 NNS denotes regions
T1447 154-163 JJ denotes alignable
T1448 164-166 IN denotes to
T1449 167-170 DT denotes the
T1451 171-176 NN denotes yeast
T1452 177-180 CC denotes and
T1453 181-185 NN denotes worm
T1450 186-195 NNS denotes orthologs
T1454 196-197 -LRB- denotes (
T1456 197-203 NN denotes Figure
T1455 204-206 NN denotes S1
T1457 206-207 -RRB- denotes )
T1458 208-209 -LRB- denotes [
T1459 209-211 CD denotes 12
T1460 211-212 -RRB- denotes ]
T1461 212-213 -RRB- denotes )
T1462 213-214 . denotes .
T1463 214-433 sentence denotes Interestingly, phylogenetic analysis of TRIP13/Pch2p shows that the mammalian protein clusters more closely to plants than it does to the evolutionarily more closely related worms and flies (Figure 1A; see Discussion).
T1464 215-228 RB denotes Interestingly
T1466 228-230 , denotes ,
T1467 230-242 JJ denotes phylogenetic
T1468 243-251 NN denotes analysis
T1469 252-254 IN denotes of
T1470 255-261 NN denotes TRIP13
T1472 261-262 HYPH denotes /
T1471 262-267 NN denotes Pch2p
T1465 268-273 VBZ denotes shows
T1473 274-278 IN denotes that
T1475 279-282 DT denotes the
T1477 283-292 JJ denotes mammalian
T1476 293-300 NN denotes protein
T1474 301-309 VBZ denotes clusters
T1478 310-314 RBR denotes more
T1479 315-322 RB denotes closely
T1480 323-325 IN denotes to
T1481 326-332 NNS denotes plants
T1482 333-337 IN denotes than
T1484 338-340 PRP denotes it
T1485 341-345 VBZ denotes does
T1483 346-348 IN denotes to
T1486 349-352 DT denotes the
T1488 353-367 RB denotes evolutionarily
T1490 368-372 RBR denotes more
T1491 373-380 RB denotes closely
T1489 381-388 VBN denotes related
T1487 389-394 NNS denotes worms
T1492 395-398 CC denotes and
T1493 399-404 NNS denotes flies
T1494 405-406 -LRB- denotes (
T1496 406-412 NN denotes Figure
T1495 413-415 NN denotes 1A
T1497 415-416 : denotes ;
T1498 417-420 VB denotes see
T1499 421-431 NN denotes Discussion
T1500 431-432 -RRB- denotes )
T1501 432-433 . denotes .
T1502 433-707 sentence denotes Semi-quantitative reverse-transcriptase PCR (RT-PCR) analysis showed Trip13 mRNA to be expressed in a variety of embryonic and adult tissues, including testis (Figure 1B), consistent with mouse and human EST data summarized in Unigene (http://www.ncbi.nlm.nih.gov/UniGene).
T1503 434-451 JJ denotes Semi-quantitative
T1505 452-459 NN denotes reverse
T1507 459-460 HYPH denotes -
T1506 460-473 NN denotes transcriptase
T1508 474-477 NN denotes PCR
T1509 478-479 -LRB- denotes (
T1510 479-481 NN denotes RT
T1512 481-482 HYPH denotes -
T1511 482-485 NN denotes PCR
T1513 485-486 -RRB- denotes )
T1504 487-495 NN denotes analysis
T1514 496-502 VBD denotes showed
T1515 503-509 NN denotes Trip13
T1516 510-514 NN denotes mRNA
T1518 515-517 TO denotes to
T1519 518-520 VB denotes be
T1517 521-530 VBN denotes expressed
T1520 531-533 IN denotes in
T1521 534-535 DT denotes a
T1522 536-543 NN denotes variety
T1523 544-546 IN denotes of
T1524 547-556 JJ denotes embryonic
T1526 557-560 CC denotes and
T1527 561-566 JJ denotes adult
T1525 567-574 NNS denotes tissues
T1528 574-576 , denotes ,
T1529 576-585 VBG denotes including
T1530 586-592 NN denotes testis
T1531 593-594 -LRB- denotes (
T1533 594-600 NN denotes Figure
T1532 601-603 NN denotes 1B
T1534 603-604 -RRB- denotes )
T1535 604-606 , denotes ,
T1536 606-616 JJ denotes consistent
T1537 617-621 IN denotes with
T1538 622-627 NN denotes mouse
T1540 628-631 CC denotes and
T1541 632-637 JJ denotes human
T1539 638-641 NN denotes EST
T1542 642-646 NNS denotes data
T1543 647-657 VBN denotes summarized
T1544 658-660 IN denotes in
T1545 661-668 NNP denotes Unigene
T1546 669-670 -LRB- denotes (
T1547 670-705 NN denotes http://www.ncbi.nlm.nih.gov/UniGene
T1548 705-706 -RRB- denotes )
T1549 706-707 . denotes .
T1550 707-768 sentence denotes It is also highly expressed in human and mouse oocytes [17].
T1551 708-710 PRP denotes It
T1553 711-713 VBZ denotes is
T1554 714-718 RB denotes also
T1555 719-725 RB denotes highly
T1552 726-735 VBN denotes expressed
T1556 736-738 IN denotes in
T1557 739-744 JJ denotes human
T1559 745-748 CC denotes and
T1558 749-754 NN denotes mouse
T1560 755-762 NNS denotes oocytes
T1561 763-764 -LRB- denotes [
T1562 764-766 CD denotes 17
T1563 766-767 -RRB- denotes ]
T1564 767-768 . denotes .
R1000 T1535 T1517 punct ", ",expressed
R1001 T1536 T1517 advcl consistent,expressed
R1002 T1537 T1536 prep with,consistent
R1003 T1538 T1539 nmod mouse,EST
R1004 T1539 T1542 compound EST,data
R1005 T1540 T1538 cc and,mouse
R1006 T1541 T1538 conj human,mouse
R1007 T1542 T1537 pobj data,with
R1008 T1543 T1542 acl summarized,data
R1009 T1544 T1543 prep in,summarized
R1010 T1545 T1544 pobj Unigene,in
R1011 T1546 T1547 punct (,http://www.ncbi.nlm.nih.gov/UniGene
R1012 T1547 T1545 parataxis http://www.ncbi.nlm.nih.gov/UniGene,Unigene
R1013 T1548 T1547 punct ),http://www.ncbi.nlm.nih.gov/UniGene
R1014 T1549 T1514 punct .,showed
R1015 T1551 T1552 nsubjpass It,expressed
R1016 T1553 T1552 auxpass is,expressed
R1017 T1554 T1552 advmod also,expressed
R1018 T1555 T1552 advmod highly,expressed
R1019 T1556 T1552 prep in,expressed
R1020 T1557 T1558 amod human,mouse
R1021 T1558 T1560 compound mouse,oocytes
R1022 T1559 T1558 cc and,mouse
R1023 T1560 T1556 pobj oocytes,in
R1024 T1561 T1562 punct [,17
R1025 T1562 T1552 parataxis 17,expressed
R1026 T1563 T1562 punct ],17
R1027 T1564 T1552 punct .,expressed
R891 T1421 T1422 det The,ortholog
R892 T1422 T1424 nsubj ortholog,encodes
R893 T1423 T1422 amod mammalian,ortholog
R894 T1425 T1422 prep of,ortholog
R895 T1426 T1425 pobj PCH2,of
R896 T1427 T1422 punct ", ",ortholog
R897 T1428 T1422 appos Trip13,ortholog
R898 T1429 T1428 punct (,Trip13
R899 T1430 T1431 compound thyroid,receptor
R900 T1431 T1433 npadvmod receptor,interacting
R901 T1432 T1431 compound hormone,receptor
R902 T1433 T1434 amod interacting,protein
R903 T1434 T1428 appos protein,Trip13
R904 T1435 T1434 nummod 13,protein
R905 T1436 T1424 punct ),encodes
R906 T1437 T1424 punct ", ",encodes
R907 T1438 T1439 det a,protein
R908 T1439 T1424 dobj protein,encodes
R909 T1440 T1439 prep with,protein
R910 T1441 T1442 amod extensive,homology
R911 T1442 T1440 pobj homology,with
R912 T1443 T1444 compound amino,acid
R913 T1444 T1442 compound acid,homology
R914 T1445 T1442 prep in,homology
R915 T1446 T1445 pobj regions,in
R916 T1447 T1446 amod alignable,regions
R917 T1448 T1447 prep to,alignable
R918 T1449 T1450 det the,orthologs
R919 T1450 T1448 pobj orthologs,to
R920 T1451 T1450 nmod yeast,orthologs
R921 T1452 T1451 cc and,yeast
R922 T1453 T1451 conj worm,yeast
R923 T1454 T1455 punct (,S1
R924 T1455 T1424 parataxis S1,encodes
R925 T1456 T1455 compound Figure,S1
R926 T1457 T1455 punct ),S1
R927 T1458 T1459 punct [,12
R928 T1459 T1424 parataxis 12,encodes
R929 T1460 T1459 punct ],12
R930 T1461 T1424 punct ),encodes
R931 T1462 T1424 punct .,encodes
R932 T1464 T1465 advmod Interestingly,shows
R933 T1466 T1465 punct ", ",shows
R934 T1467 T1468 amod phylogenetic,analysis
R935 T1468 T1465 nsubj analysis,shows
R936 T1469 T1468 prep of,analysis
R937 T1470 T1471 compound TRIP13,Pch2p
R938 T1471 T1469 pobj Pch2p,of
R939 T1472 T1471 punct /,Pch2p
R940 T1473 T1474 mark that,clusters
R941 T1474 T1465 ccomp clusters,shows
R942 T1475 T1476 det the,protein
R943 T1476 T1474 nsubj protein,clusters
R944 T1477 T1476 amod mammalian,protein
R945 T1478 T1479 advmod more,closely
R946 T1479 T1474 advmod closely,clusters
R947 T1480 T1474 prep to,clusters
R948 T1481 T1480 pobj plants,to
R949 T1482 T1483 mark than,to
R950 T1483 T1474 advcl to,clusters
R951 T1484 T1483 nsubj it,to
R952 T1485 T1483 aux does,to
R953 T1486 T1487 det the,worms
R954 T1487 T1483 pobj worms,to
R955 T1488 T1489 advmod evolutionarily,related
R956 T1489 T1487 amod related,worms
R957 T1490 T1491 advmod more,closely
R958 T1491 T1489 advmod closely,related
R959 T1492 T1487 cc and,worms
R960 T1493 T1487 conj flies,worms
R961 T1494 T1495 punct (,1A
R962 T1495 T1465 parataxis 1A,shows
R963 T1496 T1495 compound Figure,1A
R964 T1497 T1495 punct ;,1A
R965 T1498 T1495 advcl see,1A
R966 T1499 T1498 dobj Discussion,see
R967 T1500 T1495 punct ),1A
R968 T1501 T1465 punct .,shows
R969 T1503 T1504 amod Semi-quantitative,analysis
R970 T1504 T1514 nsubj analysis,showed
R971 T1505 T1506 nmod reverse,transcriptase
R972 T1506 T1508 nmod transcriptase,PCR
R973 T1507 T1506 punct -,transcriptase
R974 T1508 T1504 nmod PCR,analysis
R975 T1509 T1508 punct (,PCR
R976 T1510 T1511 compound RT,PCR
R977 T1511 T1508 appos PCR,PCR
R978 T1512 T1511 punct -,PCR
R979 T1513 T1504 punct ),analysis
R980 T1515 T1516 compound Trip13,mRNA
R981 T1516 T1517 nsubjpass mRNA,expressed
R982 T1517 T1514 ccomp expressed,showed
R983 T1518 T1517 aux to,expressed
R984 T1519 T1517 auxpass be,expressed
R985 T1520 T1517 prep in,expressed
R986 T1521 T1522 det a,variety
R987 T1522 T1520 pobj variety,in
R988 T1523 T1522 prep of,variety
R989 T1524 T1525 amod embryonic,tissues
R990 T1525 T1523 pobj tissues,of
R991 T1526 T1524 cc and,embryonic
R992 T1527 T1524 conj adult,embryonic
R993 T1528 T1525 punct ", ",tissues
R994 T1529 T1525 prep including,tissues
R995 T1530 T1529 pobj testis,including
R996 T1531 T1532 punct (,1B
R997 T1532 T1530 parataxis 1B,testis
R998 T1533 T1532 compound Figure,1B
R999 T1534 T1532 punct ),1B