PMC:1635039 / 22234-23279 JSONTXT 4 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T20789 10-20 JJ denotes Pharyngeal
T20790 21-27 NNS denotes organs
T20791 28-32 VBP denotes fail
T20792 33-35 TO denotes to
T20793 36-43 VB denotes migrate
T20794 44-46 IN denotes in
T20795 47-51 NN denotes Alk5
T20797 51-52 HYPH denotes /
T20798 52-56 NN denotes Wnt1
T20799 56-57 HYPH denotes -
T20796 57-60 NN denotes Cre
T20800 61-68 NNS denotes mutants
T20801 68-69 . denotes .
T20802 69-201 sentence denotes At E14.0, the thymus was not detectable in the superior mediastinum (asterisks) in Alk5 mutants (D), when compared to controls (A).
T20803 70-72 IN denotes At
T20805 73-78 NN denotes E14.0
T20806 78-80 , denotes ,
T20807 80-83 DT denotes the
T20808 84-90 NN denotes thymus
T20804 91-94 VBD denotes was
T20809 95-98 RB denotes not
T20810 99-109 JJ denotes detectable
T20811 110-112 IN denotes in
T20812 113-116 DT denotes the
T20814 117-125 JJ denotes superior
T20813 126-137 NN denotes mediastinum
T20815 138-139 -LRB- denotes (
T20816 139-148 NNS denotes asterisks
T20817 148-149 -RRB- denotes )
T20818 150-152 IN denotes in
T20819 153-157 NN denotes Alk5
T20820 158-165 NNS denotes mutants
T20821 166-167 -LRB- denotes (
T20822 167-168 NN denotes D
T20823 168-169 -RRB- denotes )
T20824 169-171 , denotes ,
T20825 171-175 WRB denotes when
T20826 176-184 VBN denotes compared
T20827 185-187 IN denotes to
T20828 188-196 NNS denotes controls
T20829 197-198 -LRB- denotes (
T20830 198-199 NN denotes A
T20831 199-200 -RRB- denotes )
T20832 200-201 . denotes .
T20833 201-414 sentence denotes Serial sectioning revealed that the thymic primordia had failed to descend and were seen bilaterally in the upper pharyngeal region (E, F) surrounded by neural crest derived mesenchyme (blue staining cells in E).
T20834 202-208 JJ denotes Serial
T20835 209-219 NN denotes sectioning
T20836 220-228 VBD denotes revealed
T20837 229-233 IN denotes that
T20839 234-237 DT denotes the
T20841 238-244 JJ denotes thymic
T20840 245-254 NNS denotes primordia
T20842 255-258 VBD denotes had
T20838 259-265 VBN denotes failed
T20843 266-268 TO denotes to
T20844 269-276 VB denotes descend
T20845 277-280 CC denotes and
T20846 281-285 VBD denotes were
T20847 286-290 VBN denotes seen
T20848 291-302 RB denotes bilaterally
T20849 303-305 IN denotes in
T20850 306-309 DT denotes the
T20852 310-315 JJ denotes upper
T20853 316-326 JJ denotes pharyngeal
T20851 327-333 NN denotes region
T20854 334-335 -LRB- denotes (
T20856 335-336 NN denotes E
T20857 336-338 , denotes ,
T20855 338-339 NN denotes F
T20858 339-340 -RRB- denotes )
T20859 341-351 VBN denotes surrounded
T20860 352-354 IN denotes by
T20861 355-361 JJ denotes neural
T20862 362-367 NN denotes crest
T20863 368-375 VBN denotes derived
T20864 376-386 NN denotes mesenchyme
T20865 387-388 -LRB- denotes (
T20867 388-392 JJ denotes blue
T20868 393-401 NN denotes staining
T20866 402-407 NNS denotes cells
T20869 408-410 IN denotes in
T20870 411-412 NN denotes E
T20871 412-413 -RRB- denotes )
T20872 413-414 . denotes .
T20873 414-616 sentence denotes In controls, the parathyroid glands were properly associated with the thyroid glands (arrows in C), while in Alk5 mutants the parathyroid glands were associated with the thymic primordia (arrows in F).
T20874 415-417 IN denotes In
T20876 418-426 NNS denotes controls
T20877 426-428 , denotes ,
T20878 428-431 DT denotes the
T20880 432-443 JJ denotes parathyroid
T20879 444-450 NNS denotes glands
T20881 451-455 VBD denotes were
T20882 456-464 RB denotes properly
T20875 465-475 VBN denotes associated
T20883 476-480 IN denotes with
T20884 481-484 DT denotes the
T20886 485-492 JJ denotes thyroid
T20885 493-499 NNS denotes glands
T20887 500-501 -LRB- denotes (
T20888 501-507 NNS denotes arrows
T20889 508-510 IN denotes in
T20890 511-512 NN denotes C
T20891 512-513 -RRB- denotes )
T20892 513-515 , denotes ,
T20893 515-520 IN denotes while
T20895 521-523 IN denotes in
T20896 524-528 NN denotes Alk5
T20897 529-536 NNS denotes mutants
T20898 537-540 DT denotes the
T20900 541-552 JJ denotes parathyroid
T20899 553-559 NNS denotes glands
T20901 560-564 VBD denotes were
T20894 565-575 VBN denotes associated
T20902 576-580 IN denotes with
T20903 581-584 DT denotes the
T20905 585-591 JJ denotes thymic
T20904 592-601 NNS denotes primordia
T20906 602-603 -LRB- denotes (
T20907 603-609 NNS denotes arrows
T20908 610-612 IN denotes in
T20909 613-614 NN denotes F
T20910 614-615 -RRB- denotes )
T20911 615-616 . denotes .
T20912 616-736 sentence denotes However, both controls and mutants expressed parathyroid hormone (PTH) at comparable levels (blue staining in C and F).
T20913 617-624 RB denotes However
T20915 624-626 , denotes ,
T20916 626-630 DT denotes both
T20917 631-639 NNS denotes controls
T20918 640-643 CC denotes and
T20919 644-651 NNS denotes mutants
T20914 652-661 VBD denotes expressed
T20920 662-673 NN denotes parathyroid
T20921 674-681 NN denotes hormone
T20922 682-683 -LRB- denotes (
T20923 683-686 NN denotes PTH
T20924 686-687 -RRB- denotes )
T20925 688-690 IN denotes at
T20926 691-701 JJ denotes comparable
T20927 702-708 NNS denotes levels
T20928 709-710 -LRB- denotes (
T20930 710-714 JJ denotes blue
T20929 715-723 NN denotes staining
T20931 724-726 IN denotes in
T20932 727-728 NN denotes C
T20933 729-732 CC denotes and
T20934 733-734 NN denotes F
T20935 734-735 -RRB- denotes )
T20936 735-736 . denotes .
T20937 736-922 sentence denotes A and D, hematoxyllin and eosin staining; B and E, R26 R lineage tracing assay – counterstaining with eosin; C and F, section in situ hybridization for PTH – counterstaining with eosin.
T20938 737-738 LS denotes A
T20940 739-742 CC denotes and
T20941 743-744 LS denotes D
T20942 744-746 , denotes ,
T20943 746-758 NN denotes hematoxyllin
T20944 759-762 CC denotes and
T20945 763-768 NN denotes eosin
T20939 769-777 NN denotes staining
T20946 777-778 : denotes ;
T20947 779-780 LS denotes B
T20949 781-784 CC denotes and
T20950 785-786 LS denotes E
T20951 786-788 , denotes ,
T20952 788-791 NN denotes R26
T20948 792-793 NN denotes R
T20953 794-801 NN denotes lineage
T20955 802-809 NN denotes tracing
T20954 810-815 NN denotes assay
T20956 816-817 HYPH denotes
T20957 818-833 VBG denotes counterstaining
T20958 834-838 IN denotes with
T20959 839-844 NN denotes eosin
T20960 844-845 : denotes ;
T20961 846-847 LS denotes C
T20963 848-851 CC denotes and
T20964 852-853 LS denotes F
T20965 853-855 , denotes ,
T20966 855-862 NN denotes section
T20967 863-865 FW denotes in
T20968 866-870 FW denotes situ
T20962 871-884 NN denotes hybridization
T20969 885-888 IN denotes for
T20970 889-892 NN denotes PTH
T20971 893-894 HYPH denotes
T20972 895-910 VBG denotes counterstaining
T20973 911-915 IN denotes with
T20974 916-921 NN denotes eosin
T20975 921-922 . denotes .
T20976 922-1045 sentence denotes T, thymus; Th, thyroid; asterisks in D depict the absence of the thymic primordia; asterisks in E and F depict the tongue.
T20977 923-924 NN denotes T
T20979 924-926 , denotes ,
T20980 926-932 NN denotes thymus
T20981 932-933 : denotes ;
T20982 934-936 NN denotes Th
T20983 936-938 , denotes ,
T20984 938-945 NN denotes thyroid
T20985 945-946 : denotes ;
T20986 947-956 NNS denotes asterisks
T20988 957-959 IN denotes in
T20989 960-961 NN denotes D
T20987 962-968 VBP denotes depict
T20990 969-972 DT denotes the
T20991 973-980 NN denotes absence
T20992 981-983 IN denotes of
T20993 984-987 DT denotes the
T20995 988-994 JJ denotes thymic
T20994 995-1004 NNS denotes primordia
T20996 1004-1005 : denotes ;
T20997 1006-1015 NNS denotes asterisks
T20998 1016-1018 IN denotes in
T20999 1019-1020 NN denotes E
T21000 1021-1024 CC denotes and
T21001 1025-1026 NN denotes F
T20978 1027-1033 VBP denotes depict
T21002 1034-1037 DT denotes the
T21003 1038-1044 NN denotes tongue
T21004 1044-1045 . denotes .
R6272 T20789 T20790 amod Pharyngeal,organs
R6273 T20790 T20791 nsubj organs,fail
R6274 T20792 T20793 aux to,migrate
R6275 T20793 T20791 xcomp migrate,fail
R6276 T20794 T20793 prep in,migrate
R6277 T20795 T20796 compound Alk5,Cre
R6278 T20796 T20800 compound Cre,mutants
R6279 T20797 T20796 punct /,Cre
R6280 T20798 T20796 compound Wnt1,Cre
R6281 T20799 T20796 punct -,Cre
R6282 T20800 T20794 pobj mutants,in
R6283 T20801 T20791 punct .,fail
R6284 T20803 T20804 prep At,was
R6285 T20805 T20803 pobj E14.0,At
R6286 T20806 T20804 punct ", ",was
R6287 T20807 T20808 det the,thymus
R6288 T20808 T20804 nsubj thymus,was
R6289 T20809 T20804 neg not,was
R6290 T20810 T20804 acomp detectable,was
R6291 T20811 T20804 prep in,was
R6292 T20812 T20813 det the,mediastinum
R6293 T20813 T20811 pobj mediastinum,in
R6294 T20814 T20813 amod superior,mediastinum
R6295 T20815 T20816 punct (,asterisks
R6296 T20816 T20813 parataxis asterisks,mediastinum
R6297 T20817 T20816 punct ),asterisks
R6298 T20818 T20804 prep in,was
R6299 T20819 T20820 compound Alk5,mutants
R6300 T20820 T20818 pobj mutants,in
R6301 T20821 T20822 punct (,D
R6302 T20822 T20820 parataxis D,mutants
R6303 T20823 T20822 punct ),D
R6304 T20824 T20804 punct ", ",was
R6305 T20825 T20826 advmod when,compared
R6306 T20826 T20804 advcl compared,was
R6307 T20827 T20826 prep to,compared
R6308 T20828 T20827 pobj controls,to
R6309 T20829 T20830 punct (,A
R6310 T20830 T20826 parataxis A,compared
R6311 T20831 T20830 punct ),A
R6312 T20832 T20804 punct .,was
R6313 T20834 T20835 amod Serial,sectioning
R6314 T20835 T20836 nsubj sectioning,revealed
R6315 T20837 T20838 mark that,failed
R6316 T20838 T20836 ccomp failed,revealed
R6317 T20839 T20840 det the,primordia
R6318 T20840 T20838 nsubj primordia,failed
R6319 T20841 T20840 amod thymic,primordia
R6320 T20842 T20838 aux had,failed
R6321 T20843 T20844 aux to,descend
R6322 T20844 T20838 xcomp descend,failed
R6323 T20845 T20838 cc and,failed
R6324 T20846 T20847 auxpass were,seen
R6325 T20847 T20838 conj seen,failed
R6326 T20848 T20847 advmod bilaterally,seen
R6327 T20849 T20847 prep in,seen
R6328 T20850 T20851 det the,region
R6329 T20851 T20849 pobj region,in
R6330 T20852 T20853 amod upper,pharyngeal
R6331 T20853 T20851 amod pharyngeal,region
R6332 T20854 T20855 punct (,F
R6333 T20855 T20851 parataxis F,region
R6334 T20856 T20855 nmod E,F
R6335 T20857 T20855 punct ", ",F
R6336 T20858 T20855 punct ),F
R6337 T20859 T20851 acl surrounded,region
R6338 T20860 T20859 agent by,surrounded
R6339 T20861 T20862 amod neural,crest
R6340 T20862 T20863 npadvmod crest,derived
R6341 T20863 T20864 amod derived,mesenchyme
R6342 T20864 T20860 pobj mesenchyme,by
R6343 T20865 T20866 punct (,cells
R6344 T20866 T20859 parataxis cells,surrounded
R6345 T20867 T20866 amod blue,cells
R6346 T20868 T20866 compound staining,cells
R6347 T20869 T20866 prep in,cells
R6348 T20870 T20869 pobj E,in
R6349 T20871 T20866 punct ),cells
R6350 T20872 T20836 punct .,revealed
R6351 T20874 T20875 prep In,associated
R6352 T20876 T20874 pobj controls,In
R6353 T20877 T20875 punct ", ",associated
R6354 T20878 T20879 det the,glands
R6355 T20879 T20875 nsubjpass glands,associated
R6356 T20880 T20879 amod parathyroid,glands
R6357 T20881 T20875 auxpass were,associated
R6358 T20882 T20875 advmod properly,associated
R6359 T20883 T20875 prep with,associated
R6360 T20884 T20885 det the,glands
R6361 T20885 T20883 pobj glands,with
R6362 T20886 T20885 amod thyroid,glands
R6363 T20887 T20888 punct (,arrows
R6364 T20888 T20875 parataxis arrows,associated
R6365 T20889 T20888 prep in,arrows
R6366 T20890 T20889 pobj C,in
R6367 T20891 T20888 punct ),arrows
R6368 T20892 T20875 punct ", ",associated
R6369 T20893 T20894 mark while,associated
R6370 T20894 T20875 advcl associated,associated
R6371 T20895 T20894 prep in,associated
R6372 T20896 T20897 compound Alk5,mutants
R6373 T20897 T20895 pobj mutants,in
R6374 T20898 T20899 det the,glands
R6375 T20899 T20894 nsubjpass glands,associated
R6376 T20900 T20899 amod parathyroid,glands
R6377 T20901 T20894 auxpass were,associated
R6378 T20902 T20894 prep with,associated
R6379 T20903 T20904 det the,primordia
R6380 T20904 T20902 pobj primordia,with
R6381 T20905 T20904 amod thymic,primordia
R6382 T20906 T20907 punct (,arrows
R6383 T20907 T20894 parataxis arrows,associated
R6384 T20908 T20907 prep in,arrows
R6385 T20909 T20908 pobj F,in
R6386 T20910 T20907 punct ),arrows
R6387 T20911 T20875 punct .,associated
R6388 T20913 T20914 advmod However,expressed
R6389 T20915 T20914 punct ", ",expressed
R6390 T20916 T20917 det both,controls
R6391 T20917 T20914 nsubj controls,expressed
R6392 T20918 T20917 cc and,controls
R6393 T20919 T20917 conj mutants,controls
R6394 T20920 T20921 compound parathyroid,hormone
R6395 T20921 T20914 dobj hormone,expressed
R6396 T20922 T20921 punct (,hormone
R6397 T20923 T20921 appos PTH,hormone
R6398 T20924 T20914 punct ),expressed
R6399 T20925 T20914 prep at,expressed
R6400 T20926 T20927 amod comparable,levels
R6401 T20927 T20925 pobj levels,at
R6402 T20928 T20929 punct (,staining
R6403 T20929 T20914 parataxis staining,expressed
R6404 T20930 T20929 amod blue,staining
R6405 T20931 T20929 prep in,staining
R6406 T20932 T20931 pobj C,in
R6407 T20933 T20932 cc and,C
R6408 T20934 T20932 conj F,C
R6409 T20935 T20929 punct ),staining
R6410 T20936 T20914 punct .,expressed
R6411 T20938 T20939 meta A,staining
R6412 T20940 T20938 cc and,A
R6413 T20941 T20938 conj D,A
R6414 T20942 T20939 punct ", ",staining
R6415 T20943 T20939 nmod hematoxyllin,staining
R6416 T20944 T20943 cc and,hematoxyllin
R6417 T20945 T20943 conj eosin,hematoxyllin
R6418 T20946 T20939 punct ;,staining
R6419 T20947 T20948 meta B,R
R6420 T20948 T20939 appos R,staining
R6421 T20949 T20947 cc and,B
R6422 T20950 T20947 conj E,B
R6423 T20951 T20948 punct ", ",R
R6424 T20952 T20948 compound R26,R
R6425 T20953 T20954 compound lineage,assay
R6426 T20954 T20948 appos assay,R
R6427 T20955 T20954 compound tracing,assay
R6428 T20956 T20954 punct –,assay
R6429 T20957 T20954 amod counterstaining,assay
R6430 T20958 T20948 prep with,R
R6431 T20959 T20958 pobj eosin,with
R6432 T20960 T20939 punct ;,staining
R6433 T20961 T20962 meta C,hybridization
R6434 T20962 T20939 appos hybridization,staining
R6435 T20963 T20961 cc and,C
R6436 T20964 T20961 conj F,C
R6437 T20965 T20962 punct ", ",hybridization
R6438 T20966 T20962 nmod section,hybridization
R6439 T20967 T20968 nmod in,situ
R6440 T20968 T20962 nmod situ,hybridization
R6441 T20969 T20962 prep for,hybridization
R6442 T20970 T20969 pobj PTH,for
R6443 T20971 T20970 punct –,PTH
R6444 T20972 T20970 amod counterstaining,PTH
R6445 T20973 T20970 prep with,PTH
R6446 T20974 T20973 pobj eosin,with
R6447 T20975 T20939 punct .,staining
R6448 T20977 T20978 dep T,depict
R6449 T20979 T20977 punct ", ",T
R6450 T20980 T20977 appos thymus,T
R6451 T20981 T20978 punct ;,depict
R6452 T20982 T20978 dep Th,depict
R6453 T20983 T20982 punct ", ",Th
R6454 T20984 T20982 appos thyroid,Th
R6455 T20985 T20978 punct ;,depict
R6456 T20986 T20987 nsubj asterisks,depict
R6457 T20987 T20978 ccomp depict,depict
R6458 T20988 T20986 prep in,asterisks
R6459 T20989 T20988 pobj D,in
R6460 T20990 T20991 det the,absence
R6461 T20991 T20987 dobj absence,depict
R6462 T20992 T20991 prep of,absence
R6463 T20993 T20994 det the,primordia
R6464 T20994 T20992 pobj primordia,of
R6465 T20995 T20994 amod thymic,primordia
R6466 T20996 T20978 punct ;,depict
R6467 T20997 T20978 nsubj asterisks,depict
R6468 T20998 T20997 prep in,asterisks
R6469 T20999 T20998 pobj E,in
R6470 T21000 T20999 cc and,E
R6471 T21001 T20999 conj F,E
R6472 T21002 T21003 det the,tongue
R6473 T21003 T20978 dobj tongue,depict
R6474 T21004 T20978 punct .,depict