PMC:1420271 / 18415-19277 JSONTXT 4 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T10414 0-10 NN denotes Generation
T10415 11-13 IN denotes of
T10416 14-23 JJ denotes anti-ESG1
T10418 24-34 JJ denotes polyclonal
T10417 35-45 NNS denotes antibodies
T10419 45-222 sentence denotes The coding sequence of Esg1 was amplified by PCR with the pH34-gw-s (5'- AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA-3') and pH34-gw-as (5'- AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA-3') primers.
T10420 46-49 DT denotes The
T10422 50-56 VBG denotes coding
T10421 57-65 NN denotes sequence
T10424 66-68 IN denotes of
T10425 69-73 NN denotes Esg1
T10426 74-77 VBD denotes was
T10423 78-87 VBN denotes amplified
T10427 88-90 IN denotes by
T10428 91-94 NN denotes PCR
T10429 95-99 IN denotes with
T10430 100-103 DT denotes the
T10432 104-108 NN denotes pH34
T10434 108-109 HYPH denotes -
T10435 109-111 NN denotes gw
T10436 111-112 HYPH denotes -
T10433 112-113 NN denotes s
T10437 114-115 -LRB- denotes (
T10439 115-116 CD denotes 5
T10440 116-117 SYM denotes '
T10441 117-118 HYPH denotes -
T10438 119-152 NN denotes AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA
T10442 152-153 HYPH denotes -
T10443 153-154 CD denotes 3
T10444 154-155 SYM denotes '
T10445 155-156 -RRB- denotes )
T10446 157-160 CC denotes and
T10447 161-165 NN denotes pH34
T10449 165-166 HYPH denotes -
T10450 166-168 NN denotes gw
T10451 168-169 HYPH denotes -
T10448 169-171 NN denotes as
T10452 172-173 -LRB- denotes (
T10454 173-174 CD denotes 5
T10455 174-175 SYM denotes '
T10456 175-176 HYPH denotes -
T10453 177-209 NN denotes AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA
T10457 209-210 HYPH denotes -
T10458 210-211 CD denotes 3
T10459 211-212 SYM denotes '
T10460 212-213 -RRB- denotes )
T10431 214-221 NNS denotes primers
T10461 221-222 . denotes .
T10462 222-315 sentence denotes To construct pDONR-pH34, the resulting PCR product was subcloned into pDONR201 (Invitrogen).
T10463 223-225 TO denotes To
T10464 226-235 VB denotes construct
T10466 236-241 NN denotes pDONR
T10468 241-242 HYPH denotes -
T10467 242-246 NN denotes pH34
T10469 246-248 , denotes ,
T10470 248-251 DT denotes the
T10472 252-261 VBG denotes resulting
T10473 262-265 NN denotes PCR
T10471 266-273 NN denotes product
T10474 274-277 VBD denotes was
T10465 278-287 VBN denotes subcloned
T10475 288-292 IN denotes into
T10476 293-301 NN denotes pDONR201
T10477 302-303 -LRB- denotes (
T10478 303-313 NNP denotes Invitrogen
T10479 313-314 -RRB- denotes )
T10480 314-315 . denotes .
T10481 315-388 sentence denotes pDONR-pH34 was interacted with pDEST17 (Invitrogen) by LR recombination.
T10482 316-321 NN denotes pDONR
T10484 321-322 HYPH denotes -
T10483 322-326 NN denotes pH34
T10486 327-330 VBD denotes was
T10485 331-341 VBN denotes interacted
T10487 342-346 IN denotes with
T10488 347-354 NN denotes pDEST17
T10489 355-356 -LRB- denotes (
T10490 356-366 NNP denotes Invitrogen
T10491 366-367 -RRB- denotes )
T10492 368-370 IN denotes by
T10493 371-373 NN denotes LR
T10494 374-387 NN denotes recombination
T10495 387-388 . denotes .
T10496 388-574 sentence denotes After introduction of the resulting expression vector pDEST17-pH34 into BL21-AI E. coli (Invitrogen), recombinant protein production was induced according to the manufacture's protocol.
T10497 389-394 IN denotes After
T10499 395-407 NN denotes introduction
T10500 408-410 IN denotes of
T10501 411-414 DT denotes the
T10503 415-424 VBG denotes resulting
T10504 425-435 NN denotes expression
T10502 436-442 NN denotes vector
T10505 443-450 NN denotes pDEST17
T10507 450-451 HYPH denotes -
T10506 451-455 NN denotes pH34
T10508 456-460 IN denotes into
T10509 461-465 NN denotes BL21
T10511 465-466 HYPH denotes -
T10510 466-468 NN denotes AI
T10512 469-471 FW denotes E.
T10513 472-476 FW denotes coli
T10514 477-478 -LRB- denotes (
T10515 478-488 NNP denotes Invitrogen
T10516 488-489 -RRB- denotes )
T10517 489-491 , denotes ,
T10518 491-502 JJ denotes recombinant
T10519 503-510 NN denotes protein
T10520 511-521 NN denotes production
T10521 522-525 VBD denotes was
T10498 526-533 VBN denotes induced
T10522 534-543 VBG denotes according
T10523 544-546 IN denotes to
T10524 547-550 DT denotes the
T10525 551-562 NN denotes manufacture
T10527 562-564 POS denotes 's
T10526 565-573 NN denotes protocol
T10528 573-574 . denotes .
T10529 574-714 sentence denotes Histidine-tagged ESG1 was purified using Ni-nitrilotriacetic acid agarose (Qiagen) under denaturing conditions in the presence of 8 M urea.
T10530 575-584 NN denotes Histidine
T10532 584-585 HYPH denotes -
T10531 585-591 VBN denotes tagged
T10533 592-596 NN denotes ESG1
T10535 597-600 VBD denotes was
T10534 601-609 VBN denotes purified
T10536 610-615 VBG denotes using
T10537 616-618 NN denotes Ni
T10539 618-619 : denotes -
T10540 619-635 JJ denotes nitrilotriacetic
T10541 636-640 NN denotes acid
T10538 641-648 NN denotes agarose
T10542 649-650 -LRB- denotes (
T10543 650-656 NNP denotes Qiagen
T10544 656-657 -RRB- denotes )
T10545 658-663 IN denotes under
T10546 664-674 NN denotes denaturing
T10547 675-685 NNS denotes conditions
T10548 686-688 IN denotes in
T10549 689-692 DT denotes the
T10550 693-701 NN denotes presence
T10551 702-704 IN denotes of
T10552 705-706 CD denotes 8
T10553 707-708 NN denotes M
T10554 709-713 NN denotes urea
T10555 713-714 . denotes .
T10556 714-862 sentence denotes After dialysis against 6 M urea, the recombinant proteins were injected into New Zealand White rabbits to generate anti-ESG1 polyclonal antibodies.
T10557 715-720 IN denotes After
T10559 721-729 NN denotes dialysis
T10560 730-737 IN denotes against
T10561 738-739 CD denotes 6
T10562 740-741 NN denotes M
T10563 742-746 NN denotes urea
T10564 746-748 , denotes ,
T10565 748-751 DT denotes the
T10567 752-763 JJ denotes recombinant
T10566 764-772 NN denotes proteins
T10568 773-777 VBD denotes were
T10558 778-786 VBN denotes injected
T10569 787-791 IN denotes into
T10570 792-795 NNP denotes New
T10571 796-803 NNP denotes Zealand
T10573 804-809 JJ denotes White
T10572 810-817 NNS denotes rabbits
T10574 818-820 TO denotes to
T10575 821-829 VB denotes generate
T10576 830-839 JJ denotes anti-ESG1
T10578 840-850 JJ denotes polyclonal
T10577 851-861 NNS denotes antibodies
T10579 861-862 . denotes .
R2891 T10415 T10414 prep of,Generation
R2892 T10416 T10417 amod anti-ESG1,antibodies
R2893 T10417 T10415 pobj antibodies,of
R2894 T10418 T10417 amod polyclonal,antibodies
R2895 T10420 T10421 det The,sequence
R2896 T10421 T10423 nsubjpass sequence,amplified
R2897 T10422 T10421 amod coding,sequence
R2898 T10424 T10421 prep of,sequence
R2899 T10425 T10424 pobj Esg1,of
R2900 T10426 T10423 auxpass was,amplified
R2901 T10427 T10423 agent by,amplified
R2902 T10428 T10427 pobj PCR,by
R2903 T10429 T10423 prep with,amplified
R2904 T10430 T10431 det the,primers
R2905 T10431 T10429 pobj primers,with
R2906 T10432 T10433 nmod pH34,s
R2907 T10433 T10431 nmod s,primers
R2908 T10434 T10433 punct -,s
R2909 T10435 T10433 nmod gw,s
R2910 T10436 T10433 punct -,s
R2911 T10437 T10438 punct (,AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA
R2912 T10438 T10433 parataxis AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA,s
R2913 T10439 T10438 nummod 5,AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA
R2914 T10440 T10439 punct ',5
R2915 T10441 T10438 punct -,AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA
R2916 T10442 T10438 punct -,AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA
R2917 T10443 T10438 nummod 3,AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA
R2918 T10444 T10438 punct ',AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA
R2919 T10445 T10438 punct ),AAAAAGCAGGCTGGATGATGGTGACCCTCGTGA
R2920 T10446 T10433 cc and,s
R2921 T10447 T10448 compound pH34,as
R2922 T10448 T10433 conj as,s
R2923 T10449 T10448 punct -,as
R2924 T10450 T10448 compound gw,as
R2925 T10451 T10448 punct -,as
R2926 T10452 T10453 punct (,AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA
R2927 T10453 T10448 parataxis AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA,as
R2928 T10454 T10453 nummod 5,AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA
R2929 T10455 T10454 punct ',5
R2930 T10456 T10453 punct -,AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA
R2931 T10457 T10453 punct -,AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA
R2932 T10458 T10453 nummod 3,AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA
R2933 T10459 T10453 punct ',AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA
R2934 T10460 T10453 punct ),AGAAAGCTGGGTCTGCATCCAGGTCGGAGACA
R2935 T10461 T10423 punct .,amplified
R2936 T10463 T10464 aux To,construct
R2937 T10464 T10465 advcl construct,subcloned
R2938 T10466 T10467 compound pDONR,pH34
R2939 T10467 T10464 dobj pH34,construct
R2940 T10468 T10467 punct -,pH34
R2941 T10469 T10465 punct ", ",subcloned
R2942 T10470 T10471 det the,product
R2943 T10471 T10465 nsubjpass product,subcloned
R2944 T10472 T10471 amod resulting,product
R2945 T10473 T10471 compound PCR,product
R2946 T10474 T10465 auxpass was,subcloned
R2947 T10475 T10465 prep into,subcloned
R2948 T10476 T10475 pobj pDONR201,into
R2949 T10477 T10478 punct (,Invitrogen
R2950 T10478 T10476 parataxis Invitrogen,pDONR201
R2951 T10479 T10478 punct ),Invitrogen
R2952 T10480 T10465 punct .,subcloned
R2953 T10482 T10483 compound pDONR,pH34
R2954 T10483 T10485 nsubjpass pH34,interacted
R2955 T10484 T10483 punct -,pH34
R2956 T10486 T10485 auxpass was,interacted
R2957 T10487 T10485 prep with,interacted
R2958 T10488 T10487 pobj pDEST17,with
R2959 T10489 T10490 punct (,Invitrogen
R2960 T10490 T10488 parataxis Invitrogen,pDEST17
R2961 T10491 T10490 punct ),Invitrogen
R2962 T10492 T10485 prep by,interacted
R2963 T10493 T10494 compound LR,recombination
R2964 T10494 T10492 pobj recombination,by
R2965 T10495 T10485 punct .,interacted
R2966 T10497 T10498 prep After,induced
R2967 T10499 T10497 pobj introduction,After
R2968 T10500 T10499 prep of,introduction
R2969 T10501 T10502 det the,vector
R2970 T10502 T10500 pobj vector,of
R2971 T10503 T10502 amod resulting,vector
R2972 T10504 T10502 compound expression,vector
R2973 T10505 T10506 compound pDEST17,pH34
R2974 T10506 T10502 appos pH34,vector
R2975 T10507 T10506 punct -,pH34
R2976 T10508 T10499 prep into,introduction
R2977 T10509 T10510 compound BL21,AI
R2978 T10510 T10508 pobj AI,into
R2979 T10511 T10510 punct -,AI
R2980 T10512 T10510 nmod E.,AI
R2981 T10513 T10510 nmod coli,AI
R2982 T10514 T10515 punct (,Invitrogen
R2983 T10515 T10499 parataxis Invitrogen,introduction
R2984 T10516 T10515 punct ),Invitrogen
R2985 T10517 T10498 punct ", ",induced
R2986 T10518 T10519 amod recombinant,protein
R2987 T10519 T10520 compound protein,production
R2988 T10520 T10498 nsubjpass production,induced
R2989 T10521 T10498 auxpass was,induced
R2990 T10522 T10498 prep according,induced
R2991 T10523 T10522 prep to,according
R2992 T10524 T10525 det the,manufacture
R2993 T10525 T10526 poss manufacture,protocol
R2994 T10526 T10523 pobj protocol,to
R2995 T10527 T10525 case 's,manufacture
R2996 T10528 T10498 punct .,induced
R2997 T10530 T10531 npadvmod Histidine,tagged
R2998 T10531 T10533 amod tagged,ESG1
R2999 T10532 T10531 punct -,tagged
R3000 T10533 T10534 nsubjpass ESG1,purified
R3001 T10535 T10534 auxpass was,purified
R3002 T10536 T10534 advcl using,purified
R3003 T10537 T10538 nmod Ni,agarose
R3004 T10538 T10536 dobj agarose,using
R3005 T10539 T10537 punct -,Ni
R3006 T10540 T10537 amod nitrilotriacetic,Ni
R3007 T10541 T10538 compound acid,agarose
R3008 T10542 T10543 punct (,Qiagen
R3009 T10543 T10538 parataxis Qiagen,agarose
R3010 T10544 T10543 punct ),Qiagen
R3011 T10545 T10536 prep under,using
R3012 T10546 T10547 compound denaturing,conditions
R3013 T10547 T10545 pobj conditions,under
R3014 T10548 T10536 prep in,using
R3015 T10549 T10550 det the,presence
R3016 T10550 T10548 pobj presence,in
R3017 T10551 T10550 prep of,presence
R3018 T10552 T10553 nummod 8,M
R3019 T10553 T10554 compound M,urea
R3020 T10554 T10551 pobj urea,of
R3021 T10555 T10534 punct .,purified
R3022 T10557 T10558 prep After,injected
R3023 T10559 T10557 pobj dialysis,After
R3024 T10560 T10559 prep against,dialysis
R3025 T10561 T10562 nummod 6,M
R3026 T10562 T10563 compound M,urea
R3027 T10563 T10560 pobj urea,against
R3028 T10564 T10558 punct ", ",injected
R3029 T10565 T10566 det the,proteins
R3030 T10566 T10558 nsubjpass proteins,injected
R3031 T10567 T10566 amod recombinant,proteins
R3032 T10568 T10558 auxpass were,injected
R3033 T10569 T10558 prep into,injected
R3034 T10570 T10571 nmod New,Zealand
R3035 T10571 T10572 nmod Zealand,rabbits
R3036 T10572 T10569 pobj rabbits,into
R3037 T10573 T10572 amod White,rabbits
R3038 T10574 T10575 aux to,generate
R3039 T10575 T10558 advcl generate,injected
R3040 T10576 T10577 amod anti-ESG1,antibodies
R3041 T10577 T10575 dobj antibodies,generate
R3042 T10578 T10577 amod polyclonal,antibodies
R3043 T10579 T10558 punct .,injected