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PMC:138691 JSONTXT 7 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T36 0-5 NN denotes BRCA2
T37 0-34 sentence denotes BRCA2 and homologous recombination
T38 6-9 CC denotes and
T39 10-20 JJ denotes homologous
T40 21-34 NN denotes recombination
T41 34-35 sentence denotes
T43 45-48 CD denotes Two
T42 45-166 sentence denotes Two recent papers provide new evidence relevant to the role of the breast cancer susceptibility gene BRCA2 in DNA repair.
T45 49-55 JJ denotes recent
T44 56-62 NNS denotes papers
T46 63-70 VBP denotes provide
T47 71-74 JJ denotes new
T48 75-83 NN denotes evidence
T49 84-92 JJ denotes relevant
T50 93-95 IN denotes to
T51 96-99 DT denotes the
T52 100-104 NN denotes role
T53 105-107 IN denotes of
T54 108-111 DT denotes the
T56 112-118 NN denotes breast
T57 119-125 NN denotes cancer
T58 126-140 NN denotes susceptibility
T55 141-145 NN denotes gene
T59 146-151 NN denotes BRCA2
T60 152-154 IN denotes in
T61 155-158 NN denotes DNA
T62 159-165 NN denotes repair
T63 165-166 . denotes .
T64 166-313 sentence denotes Moynahan et al provide genetic data indicating a requirement for BRCA2 in homology-dependent (recombinational) repair of DNA double-strand breaks.
T65 167-175 NNP denotes Moynahan
T67 176-178 FW denotes et
T68 179-181 FW denotes al
T66 182-189 VBP denotes provide
T69 190-197 JJ denotes genetic
T70 198-202 NNS denotes data
T71 203-213 VBG denotes indicating
T72 214-215 DT denotes a
T73 216-227 NN denotes requirement
T74 228-231 IN denotes for
T75 232-237 NN denotes BRCA2
T76 238-240 IN denotes in
T77 241-249 JJ denotes homology
T79 249-250 HYPH denotes -
T78 250-259 JJ denotes dependent
T81 260-261 -LRB- denotes (
T80 261-276 JJ denotes recombinational
T83 276-277 -RRB- denotes )
T82 278-284 NN denotes repair
T84 285-287 IN denotes of
T85 288-291 NN denotes DNA
T87 292-298 JJ denotes double
T89 298-299 HYPH denotes -
T88 299-305 NN denotes strand
T86 306-312 NNS denotes breaks
T90 312-313 . denotes .
T91 313-450 sentence denotes The second paper, by Davies et al, begins to address the mechanism through which BRCA2 makes its contribution to recombinational repair.
T92 314-317 DT denotes The
T94 318-324 JJ denotes second
T93 325-330 NN denotes paper
T96 330-332 , denotes ,
T97 332-334 IN denotes by
T98 335-341 NNP denotes Davies
T99 342-344 FW denotes et
T100 345-347 FW denotes al
T101 347-349 , denotes ,
T95 349-355 VBZ denotes begins
T102 356-358 TO denotes to
T103 359-366 VB denotes address
T104 367-370 DT denotes the
T105 371-380 NN denotes mechanism
T106 381-388 IN denotes through
T108 389-394 WDT denotes which
T109 395-400 NN denotes BRCA2
T107 401-406 VBZ denotes makes
T110 407-410 PRP$ denotes its
T111 411-423 NN denotes contribution
T112 424-426 IN denotes to
T113 427-442 JJ denotes recombinational
T114 443-449 NN denotes repair
T115 449-450 . denotes .
T116 450-563 sentence denotes BRCA2 appears to function in recombination via interactions with the major eukaryotic recombinase RAD51 [1,2,3].
T117 451-456 NN denotes BRCA2
T118 457-464 VBZ denotes appears
T119 465-467 TO denotes to
T120 468-476 VB denotes function
T121 477-479 IN denotes in
T122 480-493 NN denotes recombination
T123 494-497 IN denotes via
T124 498-510 NNS denotes interactions
T125 511-515 IN denotes with
T126 516-519 DT denotes the
T128 520-525 JJ denotes major
T129 526-536 JJ denotes eukaryotic
T127 537-548 NN denotes recombinase
T130 549-554 NN denotes RAD51
T131 555-556 -LRB- denotes [
T133 556-557 CD denotes 1
T134 557-558 , denotes ,
T135 558-559 CD denotes 2
T136 559-560 , denotes ,
T132 560-561 CD denotes 3
T137 561-562 -RRB- denotes ]
T138 562-563 . denotes .
T139 563-763 sentence denotes We briefly review the context in which the two studies were carried out, we comment on the results presented, and we discuss models designed to account for the role of BRCA2 in RAD51–mediated repair.
T140 564-566 PRP denotes We
T142 567-574 RB denotes briefly
T141 575-581 VBP denotes review
T143 582-585 DT denotes the
T144 586-593 NN denotes context
T145 594-596 IN denotes in
T147 597-602 WDT denotes which
T148 603-606 DT denotes the
T150 607-610 CD denotes two
T149 611-618 NNS denotes studies
T151 619-623 VBD denotes were
T146 624-631 VBN denotes carried
T152 632-635 RP denotes out
T153 635-637 , denotes ,
T154 637-639 PRP denotes we
T155 640-647 VBP denotes comment
T156 648-650 IN denotes on
T157 651-654 DT denotes the
T158 655-662 NNS denotes results
T159 663-672 VBN denotes presented
T160 672-674 , denotes ,
T161 674-677 CC denotes and
T162 678-680 PRP denotes we
T163 681-688 VBP denotes discuss
T164 689-695 NNS denotes models
T165 696-704 VBN denotes designed
T166 705-707 TO denotes to
T167 708-715 VB denotes account
T168 716-719 IN denotes for
T169 720-723 DT denotes the
T170 724-728 NN denotes role
T171 729-731 IN denotes of
T172 732-737 NN denotes BRCA2
T173 738-740 IN denotes in
T174 741-746 NN denotes RAD51
T176 746-747 HYPH denotes
T175 747-755 VBN denotes mediated
T177 756-762 NN denotes repair
T178 762-763 . denotes .
T227 771-776 NN denotes BRCA2
T228 777-780 VBD denotes was
T229 781-784 DT denotes the
T231 785-791 JJ denotes second
T232 792-798 NN denotes breast
T233 799-805 NN denotes cancer
T234 806-820 NN denotes susceptibility
T230 821-825 NN denotes gene
T235 826-828 TO denotes to
T237 829-831 VB denotes be
T236 832-842 VBN denotes discovered
T238 842-844 , denotes ,
T239 844-847 CC denotes and
T240 848-851 VBD denotes was
T241 852-860 VBN denotes isolated
T242 861-868 IN denotes through
T243 869-879 JJ denotes positional
T244 880-887 NN denotes cloning
T245 888-893 VBG denotes using
T246 894-898 NNS denotes data
T247 899-903 IN denotes from
T248 904-912 NNS denotes families
T249 913-917 IN denotes with
T250 918-927 JJ denotes inherited
T252 928-934 NN denotes breast
T251 935-941 NN denotes cancer
T253 942-943 -LRB- denotes [
T254 943-944 CD denotes 4
T255 944-945 -RRB- denotes ]
T256 945-946 . denotes .
T257 946-1083 sentence denotes Cells with mutant BRCA2 protein are, like many cancer cells, genetically unstable and accumulate gross chromosomal rearrangements [5,6].
T258 947-952 NNS denotes Cells
T260 953-957 IN denotes with
T261 958-964 JJ denotes mutant
T263 965-970 NN denotes BRCA2
T262 971-978 NN denotes protein
T259 979-982 VBP denotes are
T264 982-984 , denotes ,
T265 984-988 IN denotes like
T266 989-993 JJ denotes many
T268 994-1000 NN denotes cancer
T267 1001-1006 NNS denotes cells
T269 1006-1008 , denotes ,
T270 1008-1019 RB denotes genetically
T271 1020-1028 JJ denotes unstable
T272 1029-1032 CC denotes and
T273 1033-1043 VBP denotes accumulate
T274 1044-1049 JJ denotes gross
T276 1050-1061 JJ denotes chromosomal
T275 1062-1076 NNS denotes rearrangements
T277 1077-1078 -LRB- denotes [
T279 1078-1079 CD denotes 5
T280 1079-1080 , denotes ,
T278 1080-1081 CD denotes 6
T281 1081-1082 -RRB- denotes ]
T282 1082-1083 . denotes .
T283 1083-1330 sentence denotes The sequence of this large protein (3418 amino acids) offers very little clue to its function, although there are eight repeated segments (termed BRC repeats) in the middle of the protein that are highly conserved among mammalian orthologs [7,8].
T284 1084-1087 DT denotes The
T285 1088-1096 NN denotes sequence
T287 1097-1099 IN denotes of
T288 1100-1104 DT denotes this
T290 1105-1110 JJ denotes large
T289 1111-1118 NN denotes protein
T291 1119-1120 -LRB- denotes (
T292 1120-1124 CD denotes 3418
T294 1125-1130 NN denotes amino
T293 1131-1136 NNS denotes acids
T295 1136-1137 -RRB- denotes )
T286 1138-1144 VBZ denotes offers
T296 1145-1149 RB denotes very
T298 1150-1156 JJ denotes little
T297 1157-1161 NN denotes clue
T299 1162-1164 IN denotes to
T300 1165-1168 PRP$ denotes its
T301 1169-1177 NN denotes function
T302 1177-1179 , denotes ,
T303 1179-1187 IN denotes although
T305 1188-1193 EX denotes there
T304 1194-1197 VBP denotes are
T306 1198-1203 CD denotes eight
T308 1204-1212 JJ denotes repeated
T307 1213-1221 NNS denotes segments
T309 1222-1223 -LRB- denotes (
T310 1223-1229 VBN denotes termed
T311 1230-1233 NN denotes BRC
T312 1234-1241 NNS denotes repeats
T313 1241-1242 -RRB- denotes )
T314 1243-1245 IN denotes in
T315 1246-1249 DT denotes the
T316 1250-1256 NN denotes middle
T317 1257-1259 IN denotes of
T318 1260-1263 DT denotes the
T319 1264-1271 NN denotes protein
T320 1272-1276 WDT denotes that
T321 1277-1280 VBP denotes are
T322 1281-1287 RB denotes highly
T323 1288-1297 VBN denotes conserved
T324 1298-1303 IN denotes among
T325 1304-1313 JJ denotes mammalian
T326 1314-1323 NNS denotes orthologs
T327 1324-1325 -LRB- denotes [
T329 1325-1326 CD denotes 7
T330 1326-1327 , denotes ,
T328 1327-1328 CD denotes 8
T331 1328-1329 -RRB- denotes ]
T332 1329-1330 . denotes .
T437 1382-1391 VBG denotes Following
T439 1392-1395 DT denotes the
T441 1396-1404 NN denotes landmark
T440 1405-1414 NN denotes discovery
T442 1415-1417 IN denotes by
T443 1418-1424 NNP denotes Scully
T444 1425-1427 FW denotes et
T445 1428-1430 FW denotes al
T446 1431-1435 IN denotes that
T448 1436-1439 DT denotes the
T450 1440-1450 JJ denotes homologous
T451 1451-1462 NN denotes recombinase
T449 1463-1468 NN denotes RAD51
T447 1469-1480 VBZ denotes colocalizes
T452 1481-1483 IN denotes at
T453 1484-1494 JJ denotes subnuclear
T454 1495-1500 NNS denotes sites
T455 1501-1505 IN denotes with
T456 1506-1511 NN denotes BRCA1
T457 1512-1513 -LRB- denotes [
T458 1513-1514 CD denotes 9
T459 1514-1515 -RRB- denotes ]
T460 1515-1517 , denotes ,
T461 1517-1518 DT denotes a
T462 1519-1525 NN denotes number
T463 1526-1528 IN denotes of
T464 1529-1539 JJ denotes additional
T465 1540-1547 NNS denotes results
T466 1548-1552 VBP denotes have
T438 1553-1561 VBN denotes provided
T467 1562-1570 NN denotes evidence
T468 1571-1575 IN denotes that
T470 1576-1580 CC denotes both
T471 1581-1586 NN denotes BRCA1
T472 1587-1590 CC denotes and
T473 1591-1596 NN denotes BRCA2
T474 1597-1600 VBP denotes are
T469 1601-1609 VBN denotes involved
T475 1610-1612 IN denotes in
T476 1613-1628 JJ denotes recombinational
T477 1629-1635 NN denotes repair
T478 1636-1638 IN denotes of
T479 1639-1642 NN denotes DNA
T480 1643-1649 NN denotes damage
T481 1649-1650 . denotes .
T482 1650-1765 sentence denotes BRCA1 and BRCA2 form discrete nuclear foci during the S phase and after exposure to DNA damaging agents [9,10,11].
T483 1651-1656 NN denotes BRCA1
T485 1657-1660 CC denotes and
T486 1661-1666 NN denotes BRCA2
T484 1667-1671 VBP denotes form
T487 1672-1680 JJ denotes discrete
T489 1681-1688 JJ denotes nuclear
T488 1689-1693 NNS denotes foci
T490 1694-1700 IN denotes during
T491 1701-1704 DT denotes the
T493 1705-1706 NN denotes S
T492 1707-1712 NN denotes phase
T494 1713-1716 CC denotes and
T495 1717-1722 IN denotes after
T496 1723-1731 NN denotes exposure
T497 1732-1734 IN denotes to
T498 1735-1738 NN denotes DNA
T499 1739-1747 VBG denotes damaging
T500 1748-1754 NNS denotes agents
T501 1755-1756 -LRB- denotes [
T503 1756-1757 CD denotes 9
T504 1757-1758 , denotes ,
T505 1758-1760 CD denotes 10
T506 1760-1761 , denotes ,
T502 1761-1763 CD denotes 11
T507 1763-1764 -RRB- denotes ]
T508 1764-1765 . denotes .
T509 1765-1855 sentence denotes These foci are probably sites of repair of spontaneous and induced DNA damage [12,13,14].
T510 1766-1771 DT denotes These
T511 1772-1776 NNS denotes foci
T512 1777-1780 VBP denotes are
T513 1781-1789 RB denotes probably
T514 1790-1795 NNS denotes sites
T515 1796-1798 IN denotes of
T516 1799-1805 NN denotes repair
T517 1806-1808 IN denotes of
T518 1809-1820 JJ denotes spontaneous
T520 1821-1824 CC denotes and
T521 1825-1832 JJ denotes induced
T522 1833-1836 NN denotes DNA
T519 1837-1843 NN denotes damage
T523 1844-1845 -LRB- denotes [
T525 1845-1847 CD denotes 12
T526 1847-1848 , denotes ,
T527 1848-1850 CD denotes 13
T528 1850-1851 , denotes ,
T524 1851-1853 CD denotes 14
T529 1853-1854 -RRB- denotes ]
T530 1854-1855 . denotes .
T531 1855-2053 sentence denotes Cell lines defective in either BRCA1 or BRCA2 are sensitive to damaging agents that form double-strand breaks (DSBs), as are other cell lines defective in recombinational repair (reviewed in [15]).
T532 1856-1860 NN denotes Cell
T533 1861-1866 NNS denotes lines
T535 1867-1876 JJ denotes defective
T536 1877-1879 IN denotes in
T537 1880-1886 CC denotes either
T538 1887-1892 NN denotes BRCA1
T539 1893-1895 CC denotes or
T540 1896-1901 NN denotes BRCA2
T534 1902-1905 VBP denotes are
T541 1906-1915 JJ denotes sensitive
T542 1916-1918 IN denotes to
T543 1919-1927 VBG denotes damaging
T544 1928-1934 NNS denotes agents
T545 1935-1939 WDT denotes that
T546 1940-1944 VBP denotes form
T547 1945-1951 JJ denotes double
T549 1951-1952 HYPH denotes -
T548 1952-1958 JJ denotes strand
T550 1959-1965 NNS denotes breaks
T551 1966-1967 -LRB- denotes (
T552 1967-1971 NNS denotes DSBs
T553 1971-1972 -RRB- denotes )
T554 1972-1974 , denotes ,
T555 1974-1976 IN denotes as
T556 1977-1980 VBP denotes are
T557 1981-1986 JJ denotes other
T559 1987-1991 NN denotes cell
T558 1992-1997 NNS denotes lines
T560 1998-2007 JJ denotes defective
T561 2008-2010 IN denotes in
T562 2011-2026 JJ denotes recombinational
T563 2027-2033 NN denotes repair
T564 2034-2035 -LRB- denotes (
T565 2035-2043 VBN denotes reviewed
T566 2044-2046 IN denotes in
T567 2047-2048 -LRB- denotes [
T568 2048-2050 CD denotes 15
T569 2050-2051 -RRB- denotes ]
T570 2051-2052 -RRB- denotes )
T571 2052-2053 . denotes .
T572 2053-2147 sentence denotes BRCA2 interacts with the RAD51 recombinase via direct protein-protein contacts [16,17,18,19].
T573 2054-2059 NN denotes BRCA2
T574 2060-2069 VBZ denotes interacts
T575 2070-2074 IN denotes with
T576 2075-2078 DT denotes the
T578 2079-2084 NN denotes RAD51
T577 2085-2096 NN denotes recombinase
T579 2097-2100 IN denotes via
T580 2101-2107 JJ denotes direct
T582 2108-2115 NN denotes protein
T584 2115-2116 HYPH denotes -
T583 2116-2123 NN denotes protein
T581 2124-2132 NNS denotes contacts
T585 2133-2134 -LRB- denotes [
T587 2134-2136 CD denotes 16
T588 2136-2137 , denotes ,
T589 2137-2139 CD denotes 17
T590 2139-2140 , denotes ,
T591 2140-2142 CD denotes 18
T592 2142-2143 , denotes ,
T586 2143-2145 CD denotes 19
T593 2145-2146 -RRB- denotes ]
T594 2146-2147 . denotes .
T595 2147-2282 sentence denotes Biochemical analysis also showed interaction between BRCA1 and RAD51, although these detected interactions may have been indirect [9].
T596 2148-2159 JJ denotes Biochemical
T597 2160-2168 NN denotes analysis
T599 2169-2173 RB denotes also
T598 2174-2180 VBD denotes showed
T600 2181-2192 NN denotes interaction
T601 2193-2200 IN denotes between
T602 2201-2206 NN denotes BRCA1
T603 2207-2210 CC denotes and
T604 2211-2216 NN denotes RAD51
T605 2216-2218 , denotes ,
T606 2218-2226 IN denotes although
T608 2227-2232 DT denotes these
T610 2233-2241 VBN denotes detected
T609 2242-2254 NNS denotes interactions
T611 2255-2258 MD denotes may
T612 2259-2263 VB denotes have
T607 2264-2268 VBN denotes been
T613 2269-2277 JJ denotes indirect
T614 2278-2279 -LRB- denotes [
T615 2279-2280 CD denotes 9
T616 2280-2281 -RRB- denotes ]
T617 2281-2282 . denotes .
T618 2282-2353 sentence denotes The BRC repeats of BRCA2 are responsible for direct RAD51 interaction.
T619 2283-2286 DT denotes The
T621 2287-2290 NN denotes BRC
T620 2291-2298 NNS denotes repeats
T623 2299-2301 IN denotes of
T624 2302-2307 NN denotes BRCA2
T622 2308-2311 VBP denotes are
T625 2312-2323 JJ denotes responsible
T626 2324-2327 IN denotes for
T627 2328-2334 JJ denotes direct
T629 2335-2340 NN denotes RAD51
T628 2341-2352 NN denotes interaction
T630 2352-2353 . denotes .
T631 2353-2572 sentence denotes Cells lacking BRCA1/2 fail to form damage-induced subnuclear RAD51 foci with normal efficiency, suggesting that these proteins are required for the formation of recombinase complexes at the sites of DNA damage [20,21].
T632 2354-2359 NNS denotes Cells
T634 2360-2367 VBG denotes lacking
T635 2368-2373 NN denotes BRCA1
T637 2373-2374 HYPH denotes /
T636 2374-2375 NN denotes 2
T633 2376-2380 VBP denotes fail
T638 2381-2383 TO denotes to
T639 2384-2388 VB denotes form
T640 2389-2395 NN denotes damage
T642 2395-2396 HYPH denotes -
T641 2396-2403 VBN denotes induced
T644 2404-2414 JJ denotes subnuclear
T643 2415-2420 NN denotes RAD51
T645 2421-2425 NNS denotes foci
T646 2426-2430 IN denotes with
T647 2431-2437 JJ denotes normal
T648 2438-2448 NN denotes efficiency
T649 2448-2450 , denotes ,
T650 2450-2460 VBG denotes suggesting
T651 2461-2465 IN denotes that
T653 2466-2471 DT denotes these
T654 2472-2480 NN denotes proteins
T655 2481-2484 VBP denotes are
T652 2485-2493 VBN denotes required
T656 2494-2497 IN denotes for
T657 2498-2501 DT denotes the
T658 2502-2511 NN denotes formation
T659 2512-2514 IN denotes of
T660 2515-2526 NN denotes recombinase
T661 2527-2536 NNS denotes complexes
T662 2537-2539 IN denotes at
T663 2540-2543 DT denotes the
T664 2544-2549 NNS denotes sites
T665 2550-2552 IN denotes of
T666 2553-2556 NN denotes DNA
T667 2557-2563 NN denotes damage
T668 2564-2565 -LRB- denotes [
T670 2565-2567 CD denotes 20
T671 2567-2568 , denotes ,
T669 2568-2570 CD denotes 21
T672 2570-2571 -RRB- denotes ]
T673 2571-2572 . denotes .
T674 2572-2733 sentence denotes Finally, genetic measurements of recombination frequency have shown that Brca1-/- embryonic stem (ES) cells are deficient in recombinational DSB repair [22,23].
T675 2573-2580 RB denotes Finally
T677 2580-2582 , denotes ,
T678 2582-2589 JJ denotes genetic
T679 2590-2602 NNS denotes measurements
T680 2603-2605 IN denotes of
T681 2606-2619 NN denotes recombination
T682 2620-2629 NN denotes frequency
T683 2630-2634 VBP denotes have
T676 2635-2640 VBN denotes shown
T684 2641-2645 IN denotes that
T686 2646-2651 NN denotes Brca1
T688 2651-2652 SYM denotes -
T689 2652-2653 HYPH denotes /
T690 2653-2654 SYM denotes -
T691 2655-2664 JJ denotes embryonic
T692 2665-2669 NN denotes stem
T693 2670-2671 -LRB- denotes (
T694 2671-2673 NN denotes ES
T695 2673-2674 -RRB- denotes )
T687 2675-2680 NNS denotes cells
T685 2681-2684 VBP denotes are
T696 2685-2694 JJ denotes deficient
T697 2695-2697 IN denotes in
T698 2698-2713 JJ denotes recombinational
T700 2714-2717 NN denotes DSB
T699 2718-2724 NN denotes repair
T701 2725-2726 -LRB- denotes [
T703 2726-2728 CD denotes 22
T704 2728-2729 , denotes ,
T702 2729-2731 CD denotes 23
T705 2731-2732 -RRB- denotes ]
T706 2732-2733 . denotes .
T707 2733-3028 sentence denotes The similarity between phenotypes associated with BRCA1 and BRCA2 deficiency, together with data showing a similar effect of DNA damage on distribution of BRCA1 and BRCA2 in repair-proficient cells, led to the hypothesis that BRCA2, like BRCA1, is required for efficient recombinational repair.
T708 2734-2737 DT denotes The
T709 2738-2748 NN denotes similarity
T711 2749-2756 IN denotes between
T712 2757-2767 NNS denotes phenotypes
T713 2768-2778 VBN denotes associated
T714 2779-2783 IN denotes with
T715 2784-2789 NN denotes BRCA1
T717 2790-2793 CC denotes and
T718 2794-2799 NN denotes BRCA2
T716 2800-2810 NN denotes deficiency
T719 2810-2812 , denotes ,
T720 2812-2820 RB denotes together
T721 2821-2825 IN denotes with
T722 2826-2830 NNS denotes data
T723 2831-2838 VBG denotes showing
T724 2839-2840 DT denotes a
T726 2841-2848 JJ denotes similar
T725 2849-2855 NN denotes effect
T727 2856-2858 IN denotes of
T728 2859-2862 NN denotes DNA
T729 2863-2869 NN denotes damage
T730 2870-2872 IN denotes on
T731 2873-2885 NN denotes distribution
T732 2886-2888 IN denotes of
T733 2889-2894 NN denotes BRCA1
T734 2895-2898 CC denotes and
T735 2899-2904 NN denotes BRCA2
T736 2905-2907 IN denotes in
T737 2908-2914 NN denotes repair
T739 2914-2915 HYPH denotes -
T738 2915-2925 JJ denotes proficient
T740 2926-2931 NNS denotes cells
T741 2931-2933 , denotes ,
T710 2933-2936 VBD denotes led
T742 2937-2939 IN denotes to
T743 2940-2943 DT denotes the
T744 2944-2954 NN denotes hypothesis
T745 2955-2959 IN denotes that
T747 2960-2965 NN denotes BRCA2
T748 2965-2967 , denotes ,
T749 2967-2971 IN denotes like
T750 2972-2977 NN denotes BRCA1
T751 2977-2979 , denotes ,
T752 2979-2981 VBZ denotes is
T746 2982-2990 VBN denotes required
T753 2991-2994 IN denotes for
T754 2995-3004 JJ denotes efficient
T756 3005-3020 JJ denotes recombinational
T755 3021-3027 NN denotes repair
T757 3027-3028 . denotes .
T758 3028-3109 sentence denotes The paper by Moynahan et al [24] provides important support for this hypothesis.
T759 3029-3032 DT denotes The
T760 3033-3038 NN denotes paper
T762 3039-3041 IN denotes by
T763 3042-3050 NNP denotes Moynahan
T764 3051-3053 FW denotes et
T765 3054-3056 FW denotes al
T766 3057-3058 -LRB- denotes [
T767 3058-3060 CD denotes 24
T768 3060-3061 -RRB- denotes ]
T761 3062-3070 VBZ denotes provides
T769 3071-3080 JJ denotes important
T770 3081-3088 NN denotes support
T771 3089-3092 IN denotes for
T772 3093-3097 DT denotes this
T773 3098-3108 NN denotes hypothesis
T774 3108-3109 . denotes .
T1002 3182-3188 NNP denotes Pierce
T1004 3189-3191 FW denotes et
T1005 3192-3194 FW denotes al
T1006 3195-3199 VBP denotes have
T1003 3200-3208 VBN denotes designed
T1007 3209-3210 DT denotes a
T1008 3211-3214 NN denotes set
T1009 3215-3217 IN denotes of
T1010 3218-3231 NN denotes recombination
T1011 3232-3242 NNS denotes substrates
T1012 3243-3246 IN denotes for
T1013 3247-3256 VBG denotes measuring
T1014 3257-3260 DT denotes the
T1015 3261-3266 NN denotes level
T1016 3267-3269 IN denotes of
T1017 3270-3280 JJ denotes homologous
T1018 3281-3294 NN denotes recombination
T1019 3295-3297 FW denotes in
T1020 3298-3302 FW denotes vivo
T1021 3303-3304 -LRB- denotes (
T1022 3304-3308 NN denotes Fig.
T1023 3309-3310 CD denotes 1
T1024 3310-3311 -RRB- denotes )
T1025 3312-3313 -LRB- denotes [
T1026 3313-3315 CD denotes 25
T1027 3315-3316 -RRB- denotes ]
T1028 3316-3317 . denotes .
T1029 3317-3561 sentence denotes The DNA substrate contains a pair of mutated GFP genes (GFP encodes the easily detected green fluorescent protein), one of which contains a restriction site for I-SceI, a yeast intron encoded endonuclease with an 18 base pair recognition site.
T1030 3318-3321 DT denotes The
T1032 3322-3325 NN denotes DNA
T1031 3326-3335 NN denotes substrate
T1033 3336-3344 VBZ denotes contains
T1034 3345-3346 DT denotes a
T1035 3347-3351 NN denotes pair
T1036 3352-3354 IN denotes of
T1037 3355-3362 VBN denotes mutated
T1039 3363-3366 NN denotes GFP
T1038 3367-3372 NNS denotes genes
T1040 3373-3374 -LRB- denotes (
T1042 3374-3377 NN denotes GFP
T1041 3378-3385 VBZ denotes encodes
T1043 3386-3389 DT denotes the
T1045 3390-3396 RB denotes easily
T1046 3397-3405 VBN denotes detected
T1047 3406-3411 JJ denotes green
T1048 3412-3423 JJ denotes fluorescent
T1044 3424-3431 NN denotes protein
T1049 3431-3432 -RRB- denotes )
T1050 3432-3434 , denotes ,
T1051 3434-3437 CD denotes one
T1053 3438-3440 IN denotes of
T1054 3441-3446 WDT denotes which
T1052 3447-3455 VBZ denotes contains
T1055 3456-3457 DT denotes a
T1057 3458-3469 NN denotes restriction
T1056 3470-3474 NN denotes site
T1058 3475-3478 IN denotes for
T1059 3479-3480 NN denotes I
T1061 3480-3481 HYPH denotes -
T1060 3481-3485 NN denotes SceI
T1062 3485-3487 , denotes ,
T1063 3487-3488 DT denotes a
T1065 3489-3494 NN denotes yeast
T1066 3495-3501 NN denotes intron
T1067 3502-3509 VBN denotes encoded
T1064 3510-3522 NN denotes endonuclease
T1068 3523-3527 IN denotes with
T1069 3528-3530 DT denotes an
T1071 3531-3533 CD denotes 18
T1073 3534-3538 NN denotes base
T1072 3539-3543 NN denotes pair
T1074 3544-3555 NN denotes recognition
T1070 3556-3560 NN denotes site
T1075 3560-3561 . denotes .
T1076 3561-3684 sentence denotes Transient transfection of an I-SceI expression vector results in the production of a DSB in the first mutated copy of GFP.
T1077 3562-3571 JJ denotes Transient
T1078 3572-3584 NN denotes transfection
T1080 3585-3587 IN denotes of
T1081 3588-3590 DT denotes an
T1083 3591-3592 NN denotes I
T1085 3592-3593 HYPH denotes -
T1084 3593-3597 NN denotes SceI
T1086 3598-3608 NN denotes expression
T1082 3609-3615 NN denotes vector
T1079 3616-3623 VBZ denotes results
T1087 3624-3626 IN denotes in
T1088 3627-3630 DT denotes the
T1089 3631-3641 NN denotes production
T1090 3642-3644 IN denotes of
T1091 3645-3646 DT denotes a
T1092 3647-3650 NN denotes DSB
T1093 3651-3653 IN denotes in
T1094 3654-3657 DT denotes the
T1096 3658-3663 JJ denotes first
T1097 3664-3671 VBN denotes mutated
T1095 3672-3676 NN denotes copy
T1098 3677-3679 IN denotes of
T1099 3680-3683 NN denotes GFP
T1100 3683-3684 . denotes .
T1101 3684-3868 sentence denotes One or both DNA ends formed by the break invade(s) the homologous sequence in the second mutant GFP copy, resulting in repair of the DSB via a homology-mediated gene conversion event.
T1102 3685-3688 CD denotes One
T1104 3689-3691 CC denotes or
T1105 3692-3696 CC denotes both
T1107 3697-3700 NN denotes DNA
T1106 3701-3705 NNS denotes ends
T1108 3706-3712 VBN denotes formed
T1109 3713-3715 IN denotes by
T1110 3716-3719 DT denotes the
T1111 3720-3725 NN denotes break
T1103 3726-3732 VB denotes invade
T1112 3732-3733 -LRB- denotes (
T1113 3733-3734 VBZ denotes s
T1114 3734-3735 -RRB- denotes )
T1115 3736-3739 DT denotes the
T1117 3740-3750 JJ denotes homologous
T1116 3751-3759 NN denotes sequence
T1118 3760-3762 IN denotes in
T1119 3763-3766 DT denotes the
T1121 3767-3773 JJ denotes second
T1122 3774-3780 JJ denotes mutant
T1123 3781-3784 NN denotes GFP
T1120 3785-3789 NN denotes copy
T1124 3789-3791 , denotes ,
T1125 3791-3800 VBG denotes resulting
T1126 3801-3803 IN denotes in
T1127 3804-3810 NN denotes repair
T1128 3811-3813 IN denotes of
T1129 3814-3817 DT denotes the
T1130 3818-3821 NN denotes DSB
T1131 3822-3825 IN denotes via
T1132 3826-3827 DT denotes a
T1134 3828-3836 NN denotes homology
T1136 3836-3837 HYPH denotes -
T1135 3837-3845 VBN denotes mediated
T1137 3846-3850 NN denotes gene
T1138 3851-3861 NN denotes conversion
T1133 3862-3867 NN denotes event
T1139 3867-3868 . denotes .
T1140 3868-4005 sentence denotes The configuration of the GFP construct is such that homology-mediated repair often results in the formation of a functional copy of GFP.
T1141 3869-3872 DT denotes The
T1142 3873-3886 NN denotes configuration
T1144 3887-3889 IN denotes of
T1145 3890-3893 DT denotes the
T1147 3894-3897 NN denotes GFP
T1146 3898-3907 NN denotes construct
T1143 3908-3910 VBZ denotes is
T1148 3911-3915 JJ denotes such
T1149 3916-3920 IN denotes that
T1151 3921-3929 NN denotes homology
T1153 3929-3930 HYPH denotes -
T1152 3930-3938 VBN denotes mediated
T1154 3939-3945 NN denotes repair
T1155 3946-3951 RB denotes often
T1150 3952-3959 VBZ denotes results
T1156 3960-3962 IN denotes in
T1157 3963-3966 DT denotes the
T1158 3967-3976 NN denotes formation
T1159 3977-3979 IN denotes of
T1160 3980-3981 DT denotes a
T1162 3982-3992 JJ denotes functional
T1161 3993-3997 NN denotes copy
T1163 3998-4000 IN denotes of
T1164 4001-4004 NN denotes GFP
T1165 4004-4005 . denotes .
T1166 4005-4119 sentence denotes Such events can be detected by fluorescence-activated cell sorting analysis by virtue of their expression of GFP.
T1167 4006-4010 JJ denotes Such
T1168 4011-4017 NNS denotes events
T1170 4018-4021 MD denotes can
T1171 4022-4024 VB denotes be
T1169 4025-4033 VBN denotes detected
T1172 4034-4036 IN denotes by
T1173 4037-4049 NN denotes fluorescence
T1175 4049-4050 HYPH denotes -
T1174 4050-4059 VBN denotes activated
T1177 4060-4064 NN denotes cell
T1176 4065-4072 NN denotes sorting
T1178 4073-4081 NN denotes analysis
T1179 4082-4084 IN denotes by
T1180 4085-4091 NN denotes virtue
T1181 4092-4094 IN denotes of
T1182 4095-4100 PRP$ denotes their
T1183 4101-4111 NN denotes expression
T1184 4112-4114 IN denotes of
T1185 4115-4118 NN denotes GFP
T1186 4118-4119 . denotes .
T1187 4119-4788 sentence denotes Figure 1 Recombination substrates used for assaying homology-directed repair. Cutting at the I-SceI site within the mutant GFP (SceGFP) results in a double-strand break that can be repaired through homologous gene conversion using a 3'-truncated copy of GFP as sequence donor. The mechanism results in the formation of a functional copy of the GFP gene. The model shown assumes gene conversion occurs via the synthesis-dependent annealing mechanism. Moynahan et al [24] have used such a GFP recombination substrate to demonstrate that cells with defective BRCA2 protein are deficient in their ability to repair the I-SceI-induced DSB through homologous recombination.
T1188 4571-4579 NNP denotes Moynahan
T1190 4580-4582 FW denotes et
T1191 4583-4585 FW denotes al
T1192 4586-4587 -LRB- denotes [
T1193 4587-4589 CD denotes 24
T1194 4589-4590 -RRB- denotes ]
T1195 4591-4595 VBP denotes have
T1189 4596-4600 VBN denotes used
T1196 4601-4605 PDT denotes such
T1198 4606-4607 DT denotes a
T1199 4608-4611 NN denotes GFP
T1200 4612-4625 NN denotes recombination
T1197 4626-4635 NN denotes substrate
T1201 4636-4638 TO denotes to
T1202 4639-4650 VB denotes demonstrate
T1203 4651-4655 IN denotes that
T1205 4656-4661 NNS denotes cells
T1206 4662-4666 IN denotes with
T1207 4667-4676 JJ denotes defective
T1209 4677-4682 NN denotes BRCA2
T1208 4683-4690 NN denotes protein
T1204 4691-4694 VBP denotes are
T1210 4695-4704 JJ denotes deficient
T1211 4705-4707 IN denotes in
T1212 4708-4713 PRP$ denotes their
T1213 4714-4721 NN denotes ability
T1214 4722-4724 TO denotes to
T1215 4725-4731 VB denotes repair
T1216 4732-4735 DT denotes the
T1218 4736-4737 NN denotes I
T1220 4737-4738 HYPH denotes -
T1219 4738-4742 NN denotes SceI
T1222 4742-4743 HYPH denotes -
T1221 4743-4750 VBN denotes induced
T1217 4751-4754 NN denotes DSB
T1223 4755-4762 IN denotes through
T1224 4763-4773 JJ denotes homologous
T1225 4774-4787 NN denotes recombination
T1226 4787-4788 . denotes .
T1227 4788-4933 sentence denotes Expression of I-SceI resulted in 1 out of 1400 cells producing GFP via homologous recombination in the human pancreatic tumor cell line CAPAN-1.
T1228 4789-4799 NN denotes Expression
T1230 4800-4802 IN denotes of
T1231 4803-4804 NN denotes I
T1233 4804-4805 HYPH denotes -
T1232 4805-4809 NN denotes SceI
T1229 4810-4818 VBD denotes resulted
T1234 4819-4821 IN denotes in
T1235 4822-4823 CD denotes 1
T1237 4824-4827 IN denotes out
T1238 4828-4830 IN denotes of
T1236 4831-4835 CD denotes 1400
T1239 4836-4841 NNS denotes cells
T1240 4842-4851 VBG denotes producing
T1241 4852-4855 NN denotes GFP
T1242 4856-4859 IN denotes via
T1243 4860-4870 JJ denotes homologous
T1244 4871-4884 NN denotes recombination
T1245 4885-4887 IN denotes in
T1246 4888-4891 DT denotes the
T1248 4892-4897 JJ denotes human
T1250 4898-4908 JJ denotes pancreatic
T1251 4909-4914 NN denotes tumor
T1249 4915-4919 NN denotes cell
T1247 4920-4924 NN denotes line
T1252 4925-4930 NN denotes CAPAN
T1253 4930-4931 HYPH denotes -
T1254 4931-4932 CD denotes 1
T1255 4932-4933 . denotes .
T1256 4933-5063 sentence denotes CAPAN-1 cells carry a deletion of BRCA2 on one homolog and codes for a protein truncated at amino acid 1981 on the other homolog.
T1257 4934-4939 NN denotes CAPAN
T1259 4939-4940 HYPH denotes -
T1260 4940-4941 CD denotes 1
T1258 4942-4947 NNS denotes cells
T1261 4948-4953 VBP denotes carry
T1262 4954-4955 DT denotes a
T1263 4956-4964 NN denotes deletion
T1264 4965-4967 IN denotes of
T1265 4968-4973 NN denotes BRCA2
T1266 4974-4976 IN denotes on
T1267 4977-4980 CD denotes one
T1268 4981-4988 NN denotes homolog
T1269 4989-4992 CC denotes and
T1270 4993-4998 NNS denotes codes
T1271 4999-5002 IN denotes for
T1272 5003-5004 DT denotes a
T1273 5005-5012 NN denotes protein
T1274 5013-5022 VBN denotes truncated
T1275 5023-5025 IN denotes at
T1276 5026-5031 JJ denotes amino
T1277 5032-5036 NN denotes acid
T1278 5037-5041 CD denotes 1981
T1279 5042-5044 IN denotes on
T1280 5045-5048 DT denotes the
T1282 5049-5054 JJ denotes other
T1281 5055-5062 NN denotes homolog
T1283 5062-5063 . denotes .
T1284 5063-5224 sentence denotes The authors indicate that the level of I-SceI-induced recombination in CAPAN-1 is over 100-fold less than that seen using other (BRCA2+) human tumor cell lines.
T1285 5064-5067 DT denotes The
T1286 5068-5075 NNS denotes authors
T1287 5076-5084 VBP denotes indicate
T1288 5085-5089 IN denotes that
T1290 5090-5093 DT denotes the
T1291 5094-5099 NN denotes level
T1292 5100-5102 IN denotes of
T1293 5103-5104 NN denotes I
T1295 5104-5105 HYPH denotes -
T1294 5105-5109 NN denotes SceI
T1297 5109-5110 HYPH denotes -
T1296 5110-5117 VBN denotes induced
T1298 5118-5131 NN denotes recombination
T1299 5132-5134 IN denotes in
T1300 5135-5140 NN denotes CAPAN
T1301 5140-5141 HYPH denotes -
T1302 5141-5142 CD denotes 1
T1289 5143-5145 VBZ denotes is
T1303 5146-5150 IN denotes over
T1304 5151-5159 RB denotes 100-fold
T1305 5160-5164 JJR denotes less
T1306 5165-5169 IN denotes than
T1307 5170-5174 DT denotes that
T1308 5175-5179 VBN denotes seen
T1309 5180-5185 VBG denotes using
T1310 5186-5191 JJ denotes other
T1312 5192-5193 -LRB- denotes (
T1311 5193-5199 JJ denotes BRCA2+
T1314 5199-5200 -RRB- denotes )
T1315 5201-5206 JJ denotes human
T1316 5207-5212 NN denotes tumor
T1317 5213-5217 NN denotes cell
T1313 5218-5223 NNS denotes lines
T1318 5223-5224 . denotes .
T1319 5224-5401 sentence denotes The different lines examined, however, are very likely to differ genetically from CAPAN-1 cells not only at the BRCA2 locus, but also at a very large number of additional loci.
T1320 5225-5228 DT denotes The
T1322 5229-5238 JJ denotes different
T1321 5239-5244 NNS denotes lines
T1324 5245-5253 VBN denotes examined
T1325 5253-5255 , denotes ,
T1326 5255-5262 RB denotes however
T1327 5262-5264 , denotes ,
T1323 5264-5267 VBP denotes are
T1328 5268-5272 RB denotes very
T1329 5273-5279 JJ denotes likely
T1330 5280-5282 TO denotes to
T1331 5283-5289 VB denotes differ
T1332 5290-5301 RB denotes genetically
T1333 5302-5306 IN denotes from
T1334 5307-5312 NN denotes CAPAN
T1336 5312-5313 HYPH denotes -
T1337 5313-5314 CD denotes 1
T1335 5315-5320 NNS denotes cells
T1338 5321-5324 RB denotes not
T1340 5325-5329 RB denotes only
T1339 5330-5332 IN denotes at
T1341 5333-5336 DT denotes the
T1343 5337-5342 NN denotes BRCA2
T1342 5343-5348 NN denotes locus
T1344 5348-5350 , denotes ,
T1345 5350-5353 CC denotes but
T1346 5354-5358 RB denotes also
T1347 5359-5361 IN denotes at
T1348 5362-5363 DT denotes a
T1350 5364-5368 RB denotes very
T1351 5369-5374 JJ denotes large
T1349 5375-5381 NN denotes number
T1352 5382-5384 IN denotes of
T1353 5385-5395 JJ denotes additional
T1354 5396-5400 NNS denotes loci
T1355 5400-5401 . denotes .
T1356 5401-5549 sentence denotes This raises the possibility that some or even all of the recombinational repair defect seen in CAPAN-1 could be due to mutations at non-BRCA2 loci.
T1357 5402-5406 DT denotes This
T1358 5407-5413 VBZ denotes raises
T1359 5414-5417 DT denotes the
T1360 5418-5429 NN denotes possibility
T1361 5430-5434 IN denotes that
T1363 5435-5439 DT denotes some
T1364 5440-5442 CC denotes or
T1365 5443-5447 RB denotes even
T1366 5448-5451 DT denotes all
T1367 5452-5454 IN denotes of
T1368 5455-5458 DT denotes the
T1370 5459-5474 JJ denotes recombinational
T1371 5475-5481 NN denotes repair
T1369 5482-5488 NN denotes defect
T1372 5489-5493 VBN denotes seen
T1373 5494-5496 IN denotes in
T1374 5497-5502 NN denotes CAPAN
T1375 5502-5503 HYPH denotes -
T1376 5503-5504 CD denotes 1
T1377 5505-5510 MD denotes could
T1362 5511-5513 VB denotes be
T1378 5514-5517 IN denotes due
T1379 5518-5520 IN denotes to
T1380 5521-5530 NNS denotes mutations
T1381 5531-5533 IN denotes at
T1382 5534-5543 JJ denotes non-BRCA2
T1383 5544-5548 NNS denotes loci
T1384 5548-5549 . denotes .
T1385 5549-5770 sentence denotes While Moynahan et al were careful to point out this problem, two sets of results argue against the possibility that the recombinational repair deficiency of CAPAN-1 cells is completely independent of its defect in BRCA2.
T1386 5550-5555 IN denotes While
T1388 5556-5564 NNP denotes Moynahan
T1389 5565-5567 FW denotes et
T1390 5568-5570 FW denotes al
T1387 5571-5575 VBD denotes were
T1392 5576-5583 JJ denotes careful
T1393 5584-5586 TO denotes to
T1394 5587-5592 VB denotes point
T1395 5593-5596 RP denotes out
T1396 5597-5601 DT denotes this
T1397 5602-5609 NN denotes problem
T1398 5609-5611 , denotes ,
T1399 5611-5614 CD denotes two
T1400 5615-5619 NNS denotes sets
T1401 5620-5622 IN denotes of
T1402 5623-5630 NNS denotes results
T1391 5631-5636 VBP denotes argue
T1403 5637-5644 IN denotes against
T1404 5645-5648 DT denotes the
T1405 5649-5660 NN denotes possibility
T1406 5661-5665 IN denotes that
T1408 5666-5669 DT denotes the
T1410 5670-5685 JJ denotes recombinational
T1411 5686-5692 NN denotes repair
T1409 5693-5703 NN denotes deficiency
T1412 5704-5706 IN denotes of
T1413 5707-5712 NN denotes CAPAN
T1415 5712-5713 HYPH denotes -
T1416 5713-5714 CD denotes 1
T1414 5715-5720 NNS denotes cells
T1407 5721-5723 VBZ denotes is
T1417 5724-5734 RB denotes completely
T1418 5735-5746 JJ denotes independent
T1419 5747-5749 IN denotes of
T1420 5750-5753 PRP$ denotes its
T1421 5754-5760 NN denotes defect
T1422 5761-5763 IN denotes in
T1423 5764-5769 NN denotes BRCA2
T1424 5769-5770 . denotes .
T1425 5770-5897 sentence denotes First, in the same study [24], recombination in a mouse ES cell line that expresses only truncated BRCA2 protein was measured.
T1426 5771-5776 RB denotes First
T1428 5776-5778 , denotes ,
T1429 5778-5780 IN denotes in
T1430 5781-5784 DT denotes the
T1432 5785-5789 JJ denotes same
T1431 5790-5795 NN denotes study
T1433 5796-5797 -LRB- denotes [
T1434 5797-5799 CD denotes 24
T1435 5799-5800 -RRB- denotes ]
T1436 5800-5802 , denotes ,
T1437 5802-5815 NN denotes recombination
T1438 5816-5818 IN denotes in
T1439 5819-5820 DT denotes a
T1441 5821-5826 NN denotes mouse
T1442 5827-5829 NN denotes ES
T1443 5830-5834 NN denotes cell
T1440 5835-5839 NN denotes line
T1444 5840-5844 WDT denotes that
T1445 5845-5854 VBZ denotes expresses
T1446 5855-5859 RB denotes only
T1448 5860-5869 VBN denotes truncated
T1449 5870-5875 NN denotes BRCA2
T1447 5876-5883 NN denotes protein
T1450 5884-5887 VBD denotes was
T1427 5888-5896 VBN denotes measured
T1451 5896-5897 . denotes .
T1452 5897-6058 sentence denotes This line was found to have lower recombination efficiency than isogenic cells expressing full-length BRCA2 (the defect observed was about fivefold to sixfold).
T1453 5898-5902 DT denotes This
T1454 5903-5907 NN denotes line
T1456 5908-5911 VBD denotes was
T1455 5912-5917 VBN denotes found
T1457 5918-5920 TO denotes to
T1458 5921-5925 VB denotes have
T1459 5926-5931 JJR denotes lower
T1461 5932-5945 NN denotes recombination
T1460 5946-5956 NN denotes efficiency
T1462 5957-5961 IN denotes than
T1463 5962-5970 JJ denotes isogenic
T1464 5971-5976 NNS denotes cells
T1465 5977-5987 VBG denotes expressing
T1466 5988-5992 JJ denotes full
T1468 5992-5993 HYPH denotes -
T1467 5993-5999 NN denotes length
T1469 6000-6005 NN denotes BRCA2
T1470 6006-6007 -LRB- denotes (
T1472 6007-6010 DT denotes the
T1473 6011-6017 NN denotes defect
T1474 6018-6026 VBN denotes observed
T1471 6027-6030 VBD denotes was
T1475 6031-6036 RB denotes about
T1477 6037-6045 RB denotes fivefold
T1478 6046-6048 IN denotes to
T1476 6049-6056 RB denotes sixfold
T1479 6056-6057 -RRB- denotes )
T1480 6057-6058 . denotes .
T1481 6058-6257 sentence denotes Second, in an independent study, Powell was able to compare derivatives of CAPAN-1 that differed only in their ability to express full-length BRCA2 protein (S. Powell, personal communication, 2001).
T1482 6059-6065 RB denotes Second
T1484 6065-6067 , denotes ,
T1485 6067-6069 IN denotes in
T1486 6070-6072 DT denotes an
T1488 6073-6084 JJ denotes independent
T1487 6085-6090 NN denotes study
T1489 6090-6092 , denotes ,
T1490 6092-6098 NNP denotes Powell
T1483 6099-6102 VBD denotes was
T1491 6103-6107 JJ denotes able
T1492 6108-6110 TO denotes to
T1493 6111-6118 VB denotes compare
T1494 6119-6130 NNS denotes derivatives
T1495 6131-6133 IN denotes of
T1496 6134-6139 NN denotes CAPAN
T1497 6139-6140 HYPH denotes -
T1498 6140-6141 CD denotes 1
T1499 6142-6146 WDT denotes that
T1500 6147-6155 VBD denotes differed
T1501 6156-6160 RB denotes only
T1502 6161-6163 IN denotes in
T1503 6164-6169 PRP$ denotes their
T1504 6170-6177 NN denotes ability
T1505 6178-6180 TO denotes to
T1506 6181-6188 VB denotes express
T1507 6189-6193 JJ denotes full
T1509 6193-6194 HYPH denotes -
T1508 6194-6200 NN denotes length
T1511 6201-6206 NN denotes BRCA2
T1510 6207-6214 NN denotes protein
T1512 6215-6216 -LRB- denotes (
T1514 6216-6218 NNP denotes S.
T1513 6219-6225 NNP denotes Powell
T1515 6225-6227 , denotes ,
T1516 6227-6235 JJ denotes personal
T1517 6236-6249 NN denotes communication
T1518 6249-6251 , denotes ,
T1519 6251-6255 CD denotes 2001
T1520 6255-6256 -RRB- denotes )
T1521 6256-6257 . denotes .
T1522 6257-6446 sentence denotes In these experiments, the derivative expressing full-length BRCA2 yielded 10-fold more recombinants than controls expressing only truncated BRCA2 (S. Powell, personal communication, 2001).
T1523 6258-6260 IN denotes In
T1525 6261-6266 DT denotes these
T1526 6267-6278 NNS denotes experiments
T1527 6278-6280 , denotes ,
T1528 6280-6283 DT denotes the
T1529 6284-6294 NN denotes derivative
T1530 6295-6305 VBG denotes expressing
T1531 6306-6310 JJ denotes full
T1533 6310-6311 HYPH denotes -
T1532 6311-6317 NN denotes length
T1534 6318-6323 NN denotes BRCA2
T1524 6324-6331 VBD denotes yielded
T1535 6332-6339 RB denotes 10-fold
T1536 6340-6344 JJR denotes more
T1537 6345-6357 NNS denotes recombinants
T1538 6358-6362 IN denotes than
T1539 6363-6371 NNS denotes controls
T1540 6372-6382 VBG denotes expressing
T1541 6383-6387 RB denotes only
T1543 6388-6397 VBN denotes truncated
T1542 6398-6403 NN denotes BRCA2
T1544 6404-6405 -LRB- denotes (
T1546 6405-6407 NNP denotes S.
T1545 6408-6414 NNP denotes Powell
T1547 6414-6416 , denotes ,
T1548 6416-6424 JJ denotes personal
T1549 6425-6438 NN denotes communication
T1550 6438-6440 , denotes ,
T1551 6440-6444 CD denotes 2001
T1552 6444-6445 -RRB- denotes )
T1553 6445-6446 . denotes .
T1554 6446-6742 sentence denotes While the experimental design of these experiments was somewhat different from that of Moyna-han et al [24], the results raise the possibility that CAPAN-1 cells have more than one mutation that lowers the efficiency of recombinational repair relative to that observed in other human cell lines.
T1555 6447-6452 IN denotes While
T1557 6453-6456 DT denotes the
T1559 6457-6469 JJ denotes experimental
T1558 6470-6476 NN denotes design
T1560 6477-6479 IN denotes of
T1561 6480-6485 DT denotes these
T1562 6486-6497 NNS denotes experiments
T1556 6498-6501 VBD denotes was
T1564 6502-6510 RB denotes somewhat
T1565 6511-6520 JJ denotes different
T1566 6521-6525 IN denotes from
T1567 6526-6530 DT denotes that
T1568 6531-6533 IN denotes of
T1569 6534-6539 NNP denotes Moyna
T1571 6539-6540 HYPH denotes -
T1570 6540-6543 NNP denotes han
T1572 6544-6546 FW denotes et
T1573 6547-6549 FW denotes al
T1574 6550-6551 -LRB- denotes [
T1575 6551-6553 CD denotes 24
T1576 6553-6554 -RRB- denotes ]
T1577 6554-6556 , denotes ,
T1578 6556-6559 DT denotes the
T1579 6560-6567 NNS denotes results
T1563 6568-6573 VBP denotes raise
T1580 6574-6577 DT denotes the
T1581 6578-6589 NN denotes possibility
T1582 6590-6594 IN denotes that
T1584 6595-6600 NN denotes CAPAN
T1586 6600-6601 HYPH denotes -
T1587 6601-6602 CD denotes 1
T1585 6603-6608 NNS denotes cells
T1583 6609-6613 VBP denotes have
T1588 6614-6618 JJR denotes more
T1590 6619-6623 IN denotes than
T1589 6624-6627 CD denotes one
T1591 6628-6636 NN denotes mutation
T1592 6637-6641 WDT denotes that
T1593 6642-6648 VBZ denotes lowers
T1594 6649-6652 DT denotes the
T1595 6653-6663 NN denotes efficiency
T1596 6664-6666 IN denotes of
T1597 6667-6682 JJ denotes recombinational
T1598 6683-6689 NN denotes repair
T1599 6690-6698 JJ denotes relative
T1600 6699-6701 IN denotes to
T1601 6702-6706 DT denotes that
T1602 6707-6715 VBN denotes observed
T1603 6716-6718 IN denotes in
T1604 6719-6724 JJ denotes other
T1606 6725-6730 JJ denotes human
T1607 6731-6735 NN denotes cell
T1605 6736-6741 NNS denotes lines
T1608 6741-6742 . denotes .
T1609 6742-6923 sentence denotes Conversely, the BRCA2 defect in CAPAN-1 could be fully responsible for the 100-fold defect in recombination if the level of BRCA2 complementation observed by Powell was incomplete.
T1610 6743-6753 RB denotes Conversely
T1612 6753-6755 , denotes ,
T1613 6755-6758 DT denotes the
T1615 6759-6764 NN denotes BRCA2
T1614 6765-6771 NN denotes defect
T1616 6772-6774 IN denotes in
T1617 6775-6780 NN denotes CAPAN
T1618 6780-6781 HYPH denotes -
T1619 6781-6782 CD denotes 1
T1620 6783-6788 MD denotes could
T1611 6789-6791 VB denotes be
T1621 6792-6797 RB denotes fully
T1622 6798-6809 JJ denotes responsible
T1623 6810-6813 IN denotes for
T1624 6814-6817 DT denotes the
T1626 6818-6826 JJ denotes 100-fold
T1625 6827-6833 NN denotes defect
T1627 6834-6836 IN denotes in
T1628 6837-6850 NN denotes recombination
T1629 6851-6853 IN denotes if
T1631 6854-6857 DT denotes the
T1632 6858-6863 NN denotes level
T1633 6864-6866 IN denotes of
T1634 6867-6872 NN denotes BRCA2
T1635 6873-6888 NN denotes complementation
T1636 6889-6897 VBN denotes observed
T1637 6898-6900 IN denotes by
T1638 6901-6907 NNP denotes Powell
T1630 6908-6911 VBD denotes was
T1639 6912-6922 JJ denotes incomplete
T1640 6922-6923 . denotes .
T1641 6923-7216 sentence denotes Furthermore, the discrepancy between the 100-fold difference between CAPAN-1 and the other human lines as compared with the fivefold to sixfold difference between the Brca2lex1/lex2cells and Brca2+/+ ES cells might simply be accounted for by the fact that Brca2lex1/lex2 is not a null allele.
T1642 6924-6935 RB denotes Furthermore
T1644 6935-6937 , denotes ,
T1645 6937-6940 DT denotes the
T1646 6941-6952 NN denotes discrepancy
T1647 6953-6960 IN denotes between
T1648 6961-6964 DT denotes the
T1650 6965-6973 JJ denotes 100-fold
T1649 6974-6984 NN denotes difference
T1651 6985-6992 IN denotes between
T1652 6993-6998 NN denotes CAPAN
T1653 6998-6999 HYPH denotes -
T1654 6999-7000 CD denotes 1
T1655 7001-7004 CC denotes and
T1656 7005-7008 DT denotes the
T1658 7009-7014 JJ denotes other
T1659 7015-7020 JJ denotes human
T1657 7021-7026 NNS denotes lines
T1660 7027-7029 IN denotes as
T1661 7030-7038 VBN denotes compared
T1662 7039-7043 IN denotes with
T1663 7044-7047 DT denotes the
T1665 7048-7056 JJ denotes fivefold
T1667 7057-7059 IN denotes to
T1666 7060-7067 JJ denotes sixfold
T1664 7068-7078 NN denotes difference
T1668 7079-7086 IN denotes between
T1669 7087-7090 DT denotes the
T1671 7091-7100 NN denotes Brca2lex1
T1673 7100-7101 HYPH denotes /
T1672 7101-7105 NN denotes lex2
T1670 7105-7110 NNS denotes cells
T1674 7111-7114 CC denotes and
T1675 7115-7120 NN denotes Brca2
T1677 7120-7121 SYM denotes +
T1678 7121-7122 HYPH denotes /
T1679 7122-7123 SYM denotes +
T1680 7124-7126 NN denotes ES
T1676 7127-7132 NNS denotes cells
T1681 7133-7138 MD denotes might
T1682 7139-7145 RB denotes simply
T1683 7146-7148 VB denotes be
T1643 7149-7158 VBN denotes accounted
T1684 7159-7162 IN denotes for
T1685 7163-7165 IN denotes by
T1686 7166-7169 DT denotes the
T1687 7170-7174 NN denotes fact
T1688 7175-7179 IN denotes that
T1690 7180-7189 NN denotes Brca2lex1
T1692 7189-7190 HYPH denotes /
T1691 7190-7194 NN denotes lex2
T1689 7195-7197 VBZ denotes is
T1693 7198-7201 RB denotes not
T1694 7202-7203 DT denotes a
T1696 7204-7208 JJ denotes null
T1695 7209-7215 NN denotes allele
T1697 7215-7216 . denotes .
T1698 7216-7323 sentence denotes Additional studies are likely to shed light on the efficiency of BRCA2-independent recombination pathways.
T1699 7217-7227 JJ denotes Additional
T1700 7228-7235 NNS denotes studies
T1701 7236-7239 VBP denotes are
T1702 7240-7246 JJ denotes likely
T1703 7247-7249 TO denotes to
T1704 7250-7254 VB denotes shed
T1705 7255-7260 NN denotes light
T1706 7261-7263 IN denotes on
T1707 7264-7267 DT denotes the
T1708 7268-7278 NN denotes efficiency
T1709 7279-7281 IN denotes of
T1710 7282-7287 NN denotes BRCA2
T1712 7287-7288 HYPH denotes -
T1711 7288-7299 JJ denotes independent
T1714 7300-7313 NN denotes recombination
T1713 7314-7322 NNS denotes pathways
T1715 7322-7323 . denotes .
T1716 7323-7457 sentence denotes Taken together, the results indicate that BRCA2 is indeed required for high levels of recombinational repair in both human and mouse.
T1717 7324-7329 VBN denotes Taken
T1719 7330-7338 RB denotes together
T1720 7338-7340 , denotes ,
T1721 7340-7343 DT denotes the
T1722 7344-7351 NNS denotes results
T1718 7352-7360 VBP denotes indicate
T1723 7361-7365 IN denotes that
T1725 7366-7371 NN denotes BRCA2
T1726 7372-7374 VBZ denotes is
T1727 7375-7381 RB denotes indeed
T1724 7382-7390 VBN denotes required
T1728 7391-7394 IN denotes for
T1729 7395-7399 JJ denotes high
T1730 7400-7406 NNS denotes levels
T1731 7407-7409 IN denotes of
T1732 7410-7425 JJ denotes recombinational
T1733 7426-7432 NN denotes repair
T1734 7433-7435 IN denotes in
T1735 7436-7440 CC denotes both
T1737 7441-7446 JJ denotes human
T1738 7447-7450 CC denotes and
T1736 7451-7456 NN denotes mouse
T1739 7456-7457 . denotes .
T2154 7499-7502 DT denotes The
T2156 7503-7509 JJ denotes second
T2155 7510-7515 NN denotes paper
T2158 7516-7525 VBG denotes providing
T2159 7526-7534 NN denotes evidence
T2160 7534-7536 , denotes ,
T2161 7536-7538 IN denotes by
T2162 7539-7545 NNP denotes Davies
T2163 7546-7548 FW denotes et
T2164 7549-7551 FW denotes al
T2165 7552-7553 -LRB- denotes [
T2166 7553-7555 CD denotes 26
T2167 7555-7556 -RRB- denotes ]
T2168 7556-7558 , denotes ,
T2157 7558-7560 VBZ denotes is
T2169 7561-7562 DT denotes a
T2171 7563-7574 JJ denotes biochemical
T2170 7575-7580 NN denotes study
T2172 7581-7583 IN denotes of
T2173 7584-7587 DT denotes the
T2174 7588-7599 NN denotes interaction
T2175 7600-7607 IN denotes between
T2176 7608-7611 DT denotes the
T2178 7612-7622 JJ denotes homologous
T2179 7623-7634 NN denotes recombinase
T2177 7635-7640 NN denotes RAD51
T2180 7641-7644 CC denotes and
T2181 7645-7646 DT denotes a
T2182 7647-7654 NN denotes peptide
T2183 7655-7665 VBG denotes consisting
T2184 7666-7668 IN denotes of
T2185 7669-7672 CD denotes one
T2186 7673-7675 IN denotes of
T2187 7676-7679 DT denotes the
T2189 7680-7685 CD denotes eight
T2190 7686-7689 NN denotes BRC
T2188 7690-7697 NNS denotes repeats
T2191 7698-7702 IN denotes from
T2192 7703-7708 JJ denotes human
T2193 7709-7714 NN denotes BRCA2
T2194 7714-7715 . denotes .
T2195 7715-7842 sentence denotes Expression of a single BRC repeat (BRC4) had previously been reported to act as an inhibitor of DNA repair by Chen et al [27].
T2196 7716-7726 NN denotes Expression
T2198 7727-7729 IN denotes of
T2199 7730-7731 DT denotes a
T2201 7732-7738 JJ denotes single
T2202 7739-7742 NN denotes BRC
T2200 7743-7749 NN denotes repeat
T2203 7750-7751 -LRB- denotes (
T2204 7751-7755 NN denotes BRC4
T2205 7755-7756 -RRB- denotes )
T2206 7757-7760 VBD denotes had
T2207 7761-7771 RB denotes previously
T2208 7772-7776 VBN denotes been
T2197 7777-7785 VBN denotes reported
T2209 7786-7788 TO denotes to
T2210 7789-7792 VB denotes act
T2211 7793-7795 IN denotes as
T2212 7796-7798 DT denotes an
T2213 7799-7808 NN denotes inhibitor
T2214 7809-7811 IN denotes of
T2215 7812-7815 NN denotes DNA
T2216 7816-7822 NN denotes repair
T2217 7823-7825 IN denotes by
T2218 7826-7830 NNP denotes Chen
T2219 7831-7833 FW denotes et
T2220 7834-7836 FW denotes al
T2221 7837-7838 -LRB- denotes [
T2222 7838-7840 CD denotes 27
T2223 7840-7841 -RRB- denotes ]
T2224 7841-7842 . denotes .
T2225 7842-8110 sentence denotes These investigators showed that expression of constructs containing the BRC4 repeat in MCF-7 cells enhances the radiosensitivity of cells and blocks both the G2/M delay associated with damage and the ability of the transfected cells to assembly subnuclear RAD51 foci.
T2226 7843-7848 DT denotes These
T2227 7849-7862 NNS denotes investigators
T2228 7863-7869 VBD denotes showed
T2229 7870-7874 IN denotes that
T2231 7875-7885 NN denotes expression
T2232 7886-7888 IN denotes of
T2233 7889-7899 NNS denotes constructs
T2234 7900-7910 VBG denotes containing
T2235 7911-7914 DT denotes the
T2237 7915-7919 NN denotes BRC4
T2236 7920-7926 NN denotes repeat
T2238 7927-7929 IN denotes in
T2239 7930-7933 NN denotes MCF
T2241 7933-7934 HYPH denotes -
T2242 7934-7935 CD denotes 7
T2240 7936-7941 NNS denotes cells
T2230 7942-7950 VBZ denotes enhances
T2243 7951-7954 DT denotes the
T2244 7955-7971 NN denotes radiosensitivity
T2245 7972-7974 IN denotes of
T2246 7975-7980 NNS denotes cells
T2247 7981-7984 CC denotes and
T2248 7985-7991 VBZ denotes blocks
T2249 7992-7996 CC denotes both
T2251 7997-8000 DT denotes the
T2252 8001-8003 NN denotes G2
T2254 8003-8004 HYPH denotes /
T2253 8004-8005 NN denotes M
T2250 8006-8011 NN denotes delay
T2255 8012-8022 VBN denotes associated
T2256 8023-8027 IN denotes with
T2257 8028-8034 NN denotes damage
T2258 8035-8038 CC denotes and
T2259 8039-8042 DT denotes the
T2260 8043-8050 NN denotes ability
T2261 8051-8053 IN denotes of
T2262 8054-8057 DT denotes the
T2264 8058-8069 VBN denotes transfected
T2263 8070-8075 NNS denotes cells
T2265 8076-8078 TO denotes to
T2266 8079-8087 VB denotes assembly
T2267 8088-8098 JJ denotes subnuclear
T2269 8099-8104 NN denotes RAD51
T2268 8105-8109 NNS denotes foci
T2270 8109-8110 . denotes .
T2271 8110-8271 sentence denotes In the paper by Davies et al, data provide evidence for a plausible mechanism of the dominant negative effect associated with expression of a single BRC repeat.
T2272 8111-8113 IN denotes In
T2274 8114-8117 DT denotes the
T2275 8118-8123 NN denotes paper
T2276 8124-8126 IN denotes by
T2277 8127-8133 NNP denotes Davies
T2278 8134-8136 FW denotes et
T2279 8137-8139 FW denotes al
T2280 8139-8141 , denotes ,
T2281 8141-8145 NNS denotes data
T2273 8146-8153 VBP denotes provide
T2282 8154-8162 NN denotes evidence
T2283 8163-8166 IN denotes for
T2284 8167-8168 DT denotes a
T2286 8169-8178 JJ denotes plausible
T2285 8179-8188 NN denotes mechanism
T2287 8189-8191 IN denotes of
T2288 8192-8195 DT denotes the
T2290 8196-8204 JJ denotes dominant
T2291 8205-8213 JJ denotes negative
T2289 8214-8220 NN denotes effect
T2292 8221-8231 VBN denotes associated
T2293 8232-8236 IN denotes with
T2294 8237-8247 NN denotes expression
T2295 8248-8250 IN denotes of
T2296 8251-8252 DT denotes a
T2298 8253-8259 JJ denotes single
T2299 8260-8263 NN denotes BRC
T2297 8264-8270 NN denotes repeat
T2300 8270-8271 . denotes .
T2301 8271-8443 sentence denotes DNA binding assays and electron microscopy methods were used to show that a BRC3 peptide interferes with the ability of RAD51 to assemble into oligomeric filaments on DNA.
T2302 8272-8275 NN denotes DNA
T2304 8276-8283 NN denotes binding
T2303 8284-8290 NNS denotes assays
T2306 8291-8294 CC denotes and
T2307 8295-8303 NN denotes electron
T2308 8304-8314 NN denotes microscopy
T2309 8315-8322 NNS denotes methods
T2310 8323-8327 VBD denotes were
T2305 8328-8332 VBN denotes used
T2311 8333-8335 TO denotes to
T2312 8336-8340 VB denotes show
T2313 8341-8345 IN denotes that
T2315 8346-8347 DT denotes a
T2317 8348-8352 NN denotes BRC3
T2316 8353-8360 NN denotes peptide
T2314 8361-8371 VBZ denotes interferes
T2318 8372-8376 IN denotes with
T2319 8377-8380 DT denotes the
T2320 8381-8388 NN denotes ability
T2321 8389-8391 IN denotes of
T2322 8392-8397 NN denotes RAD51
T2323 8398-8400 TO denotes to
T2324 8401-8409 VB denotes assemble
T2325 8410-8414 IN denotes into
T2326 8415-8425 JJ denotes oligomeric
T2327 8426-8435 NNS denotes filaments
T2328 8436-8438 IN denotes on
T2329 8439-8442 NN denotes DNA
T2330 8442-8443 . denotes .
T2331 8443-8514 sentence denotes A BRC4 peptide was also reported to inhibit the RAD51–DNA interaction.
T2332 8444-8445 DT denotes A
T2334 8446-8450 NN denotes BRC4
T2333 8451-8458 NN denotes peptide
T2336 8459-8462 VBD denotes was
T2337 8463-8467 RB denotes also
T2335 8468-8476 VBN denotes reported
T2338 8477-8479 TO denotes to
T2339 8480-8487 VB denotes inhibit
T2340 8488-8491 DT denotes the
T2342 8492-8497 NN denotes RAD51
T2344 8497-8498 HYPH denotes
T2343 8498-8501 NN denotes DNA
T2341 8502-8513 NN denotes interaction
T2345 8513-8514 . denotes .
T2346 8514-8663 sentence denotes These experiments raise the possibility that the full-length BRCA2 protein could act as a negative regulator of inappropriate RAD51–DNA interaction.
T2347 8515-8520 DT denotes These
T2348 8521-8532 NNS denotes experiments
T2349 8533-8538 VBP denotes raise
T2350 8539-8542 DT denotes the
T2351 8543-8554 NN denotes possibility
T2352 8555-8559 IN denotes that
T2354 8560-8563 DT denotes the
T2356 8564-8568 JJ denotes full
T2358 8568-8569 HYPH denotes -
T2357 8569-8575 NN denotes length
T2359 8576-8581 NN denotes BRCA2
T2355 8582-8589 NN denotes protein
T2360 8590-8595 MD denotes could
T2353 8596-8599 VB denotes act
T2361 8600-8602 IN denotes as
T2362 8603-8604 DT denotes a
T2364 8605-8613 JJ denotes negative
T2363 8614-8623 NN denotes regulator
T2365 8624-8626 IN denotes of
T2366 8627-8640 JJ denotes inappropriate
T2368 8641-8646 NN denotes RAD51
T2370 8646-8647 HYPH denotes
T2369 8647-8650 NN denotes DNA
T2367 8651-8662 NN denotes interaction
T2371 8662-8663 . denotes .
T2372 8663-8847 sentence denotes The final experiment reported by Davies et al [26] is particularly important with respect to understanding the mechanism(s) through which BRCA2 promotes RAD51-dependent recombination.
T2373 8664-8667 DT denotes The
T2375 8668-8673 JJ denotes final
T2374 8674-8684 NN denotes experiment
T2377 8685-8693 VBN denotes reported
T2378 8694-8696 IN denotes by
T2379 8697-8703 NNP denotes Davies
T2380 8704-8706 FW denotes et
T2381 8707-8709 FW denotes al
T2382 8710-8711 -LRB- denotes [
T2383 8711-8713 CD denotes 26
T2384 8713-8714 -RRB- denotes ]
T2376 8715-8717 VBZ denotes is
T2385 8718-8730 RB denotes particularly
T2386 8731-8740 JJ denotes important
T2387 8741-8745 IN denotes with
T2388 8746-8753 NN denotes respect
T2389 8754-8756 IN denotes to
T2390 8757-8770 VBG denotes understanding
T2391 8771-8774 DT denotes the
T2393 8775-8784 NN denotes mechanism
T2394 8784-8785 -LRB- denotes (
T2392 8785-8786 NNS denotes s
T2395 8786-8787 -RRB- denotes )
T2396 8788-8795 IN denotes through
T2398 8796-8801 WDT denotes which
T2399 8802-8807 NN denotes BRCA2
T2397 8808-8816 VBZ denotes promotes
T2400 8817-8822 NN denotes RAD51
T2402 8822-8823 HYPH denotes -
T2401 8823-8832 JJ denotes dependent
T2403 8833-8846 NN denotes recombination
T2404 8846-8847 . denotes .
T2405 8847-8963 sentence denotes The localization of RAD51 was examined in CAPAN-1 cells, the same human tumor line examined by Moynahan et al [24].
T2406 8848-8851 DT denotes The
T2407 8852-8864 NN denotes localization
T2409 8865-8867 IN denotes of
T2410 8868-8873 NN denotes RAD51
T2411 8874-8877 VBD denotes was
T2408 8878-8886 VBN denotes examined
T2412 8887-8889 IN denotes in
T2413 8890-8895 NN denotes CAPAN
T2415 8895-8896 HYPH denotes -
T2416 8896-8897 CD denotes 1
T2414 8898-8903 NNS denotes cells
T2417 8903-8905 , denotes ,
T2418 8905-8908 DT denotes the
T2420 8909-8913 JJ denotes same
T2421 8914-8919 JJ denotes human
T2422 8920-8925 NN denotes tumor
T2419 8926-8930 NN denotes line
T2423 8931-8939 VBN denotes examined
T2424 8940-8942 IN denotes by
T2425 8943-8951 NNP denotes Moynahan
T2426 8952-8954 FW denotes et
T2427 8955-8957 FW denotes al
T2428 8958-8959 -LRB- denotes [
T2429 8959-8961 CD denotes 24
T2430 8961-8962 -RRB- denotes ]
T2431 8962-8963 . denotes .
T2432 8963-9198 sentence denotes It had been shown previously that the small amount of truncated BRCA2 protein expressed by CAPAN-1 cells was mislocalized to the cytoplasm, consistent with the fact that the truncation protein lacks a nuclear localization signal [28].
T2433 8964-8966 PRP denotes It
T2435 8967-8970 VBD denotes had
T2436 8971-8975 VBN denotes been
T2434 8976-8981 VBN denotes shown
T2437 8982-8992 RB denotes previously
T2438 8993-8997 IN denotes that
T2440 8998-9001 DT denotes the
T2442 9002-9007 JJ denotes small
T2441 9008-9014 NN denotes amount
T2443 9015-9017 IN denotes of
T2444 9018-9027 VBN denotes truncated
T2446 9028-9033 NN denotes BRCA2
T2445 9034-9041 NN denotes protein
T2447 9042-9051 VBN denotes expressed
T2448 9052-9054 IN denotes by
T2449 9055-9060 NN denotes CAPAN
T2451 9060-9061 HYPH denotes -
T2452 9061-9062 CD denotes 1
T2450 9063-9068 NNS denotes cells
T2453 9069-9072 VBD denotes was
T2439 9073-9085 VBN denotes mislocalized
T2454 9086-9088 IN denotes to
T2455 9089-9092 DT denotes the
T2456 9093-9102 NN denotes cytoplasm
T2457 9102-9104 , denotes ,
T2458 9104-9114 JJ denotes consistent
T2459 9115-9119 IN denotes with
T2460 9120-9123 DT denotes the
T2461 9124-9128 NN denotes fact
T2462 9129-9133 IN denotes that
T2464 9134-9137 DT denotes the
T2466 9138-9148 NN denotes truncation
T2465 9149-9156 NN denotes protein
T2463 9157-9162 VBZ denotes lacks
T2467 9163-9164 DT denotes a
T2469 9165-9172 JJ denotes nuclear
T2470 9173-9185 NN denotes localization
T2468 9186-9192 NN denotes signal
T2471 9193-9194 -LRB- denotes [
T2472 9194-9196 CD denotes 28
T2473 9196-9197 -RRB- denotes ]
T2474 9197-9198 . denotes .
T2475 9198-9370 sentence denotes Davies et al showed CAPAN-1 cells to be defective in nuclear localization of RAD51, raising the possibility that RAD51 is normally carried to the nucleus by binding BRCA2.
T2476 9199-9205 NNP denotes Davies
T2478 9206-9208 FW denotes et
T2479 9209-9211 FW denotes al
T2477 9212-9218 VBD denotes showed
T2480 9219-9224 NN denotes CAPAN
T2482 9224-9225 HYPH denotes -
T2483 9225-9226 CD denotes 1
T2481 9227-9232 NNS denotes cells
T2485 9233-9235 TO denotes to
T2484 9236-9238 VB denotes be
T2486 9239-9248 JJ denotes defective
T2487 9249-9251 IN denotes in
T2488 9252-9259 JJ denotes nuclear
T2489 9260-9272 NN denotes localization
T2490 9273-9275 IN denotes of
T2491 9276-9281 NN denotes RAD51
T2492 9281-9283 , denotes ,
T2493 9283-9290 VBG denotes raising
T2494 9291-9294 DT denotes the
T2495 9295-9306 NN denotes possibility
T2496 9307-9311 IN denotes that
T2498 9312-9317 NN denotes RAD51
T2499 9318-9320 VBZ denotes is
T2500 9321-9329 RB denotes normally
T2497 9330-9337 VBN denotes carried
T2501 9338-9340 IN denotes to
T2502 9341-9344 DT denotes the
T2503 9345-9352 NN denotes nucleus
T2504 9353-9355 IN denotes by
T2505 9356-9363 VBG denotes binding
T2506 9364-9369 NN denotes BRCA2
T2507 9369-9370 . denotes .
T2508 9370-9563 sentence denotes It is possible that RAD51 may alternatively be capable of BRCA2-independent transport, but mislocalization of BRCA2 to the cytoplasm may sequester RAD51 and block its normal mode of transport.
T2509 9371-9373 PRP denotes It
T2510 9374-9376 VBZ denotes is
T2511 9377-9385 JJ denotes possible
T2512 9386-9390 IN denotes that
T2514 9391-9396 NN denotes RAD51
T2515 9397-9400 MD denotes may
T2516 9401-9414 RB denotes alternatively
T2513 9415-9417 VB denotes be
T2517 9418-9425 JJ denotes capable
T2518 9426-9428 IN denotes of
T2519 9429-9434 NN denotes BRCA2
T2521 9434-9435 HYPH denotes -
T2520 9435-9446 JJ denotes independent
T2522 9447-9456 NN denotes transport
T2523 9456-9458 , denotes ,
T2524 9458-9461 CC denotes but
T2525 9462-9477 NN denotes mislocalization
T2527 9478-9480 IN denotes of
T2528 9481-9486 NN denotes BRCA2
T2529 9487-9489 IN denotes to
T2530 9490-9493 DT denotes the
T2531 9494-9503 NN denotes cytoplasm
T2532 9504-9507 MD denotes may
T2526 9508-9517 VB denotes sequester
T2533 9518-9523 NN denotes RAD51
T2534 9524-9527 CC denotes and
T2535 9528-9533 VB denotes block
T2536 9534-9537 PRP$ denotes its
T2538 9538-9544 JJ denotes normal
T2537 9545-9549 NN denotes mode
T2539 9550-9552 IN denotes of
T2540 9553-9562 NN denotes transport
T2541 9562-9563 . denotes .
T2542 9563-9738 sentence denotes Support for the hypothesis that the observed mislocalization of RAD51 is an indirect consequence of the BRCA2 defect requires reintroduction of functional BRCA2 into CAPAN-1.
T2543 9564-9571 NN denotes Support
T2545 9572-9575 IN denotes for
T2546 9576-9579 DT denotes the
T2547 9580-9590 NN denotes hypothesis
T2548 9591-9595 IN denotes that
T2550 9596-9599 DT denotes the
T2552 9600-9608 VBN denotes observed
T2551 9609-9624 NN denotes mislocalization
T2553 9625-9627 IN denotes of
T2554 9628-9633 NN denotes RAD51
T2549 9634-9636 VBZ denotes is
T2555 9637-9639 DT denotes an
T2557 9640-9648 JJ denotes indirect
T2556 9649-9660 NN denotes consequence
T2558 9661-9663 IN denotes of
T2559 9664-9667 DT denotes the
T2561 9668-9673 NN denotes BRCA2
T2560 9674-9680 NN denotes defect
T2544 9681-9689 VBZ denotes requires
T2562 9690-9704 NN denotes reintroduction
T2563 9705-9707 IN denotes of
T2564 9708-9718 JJ denotes functional
T2565 9719-9724 NN denotes BRCA2
T2566 9725-9729 IN denotes into
T2567 9730-9735 NN denotes CAPAN
T2568 9735-9736 HYPH denotes -
T2569 9736-9737 CD denotes 1
T2570 9737-9738 . denotes .
T2571 9738-9935 sentence denotes Given the elaborate nature of the RAD51–BRCA2 interaction, it seems somewhat unlikely that the only role of BRCA2 in promoting recombination is to serve as a specific nuclear transporter of RAD51.
T2572 9739-9744 VBN denotes Given
T2574 9745-9748 DT denotes the
T2576 9749-9758 JJ denotes elaborate
T2575 9759-9765 NN denotes nature
T2577 9766-9768 IN denotes of
T2578 9769-9772 DT denotes the
T2580 9773-9778 NN denotes RAD51
T2582 9778-9779 HYPH denotes
T2581 9779-9784 NN denotes BRCA2
T2579 9785-9796 NN denotes interaction
T2583 9796-9798 , denotes ,
T2584 9798-9800 PRP denotes it
T2573 9801-9806 VBZ denotes seems
T2585 9807-9815 RB denotes somewhat
T2586 9816-9824 JJ denotes unlikely
T2587 9825-9829 IN denotes that
T2589 9830-9833 DT denotes the
T2591 9834-9838 JJ denotes only
T2590 9839-9843 NN denotes role
T2592 9844-9846 IN denotes of
T2593 9847-9852 NN denotes BRCA2
T2594 9853-9855 IN denotes in
T2595 9856-9865 VBG denotes promoting
T2596 9866-9879 NN denotes recombination
T2588 9880-9882 VBZ denotes is
T2597 9883-9885 TO denotes to
T2598 9886-9891 VB denotes serve
T2599 9892-9894 IN denotes as
T2600 9895-9896 DT denotes a
T2602 9897-9905 JJ denotes specific
T2603 9906-9913 JJ denotes nuclear
T2601 9914-9925 NN denotes transporter
T2604 9926-9928 IN denotes of
T2605 9929-9934 NN denotes RAD51
T2606 9934-9935 . denotes .
T2607 9935-10116 sentence denotes An attractive alternative, favored by Davies et al [26], is that the association of RAD51–BRCA2 is required to maintain RAD51 in a form that is in a state of 'readiness' (Fig. 2a).
T2608 9936-9938 DT denotes An
T2610 9939-9949 JJ denotes attractive
T2609 9950-9961 NN denotes alternative
T2612 9961-9963 , denotes ,
T2613 9963-9970 VBN denotes favored
T2614 9971-9973 IN denotes by
T2615 9974-9980 NNP denotes Davies
T2616 9981-9983 FW denotes et
T2617 9984-9986 FW denotes al
T2618 9987-9988 -LRB- denotes [
T2619 9988-9990 CD denotes 26
T2620 9990-9991 -RRB- denotes ]
T2621 9991-9993 , denotes ,
T2611 9993-9995 VBZ denotes is
T2622 9996-10000 IN denotes that
T2624 10001-10004 DT denotes the
T2625 10005-10016 NN denotes association
T2626 10017-10019 IN denotes of
T2627 10020-10025 NN denotes RAD51
T2629 10025-10026 HYPH denotes
T2628 10026-10031 NN denotes BRCA2
T2630 10032-10034 VBZ denotes is
T2623 10035-10043 VBN denotes required
T2631 10044-10046 TO denotes to
T2632 10047-10055 VB denotes maintain
T2633 10056-10061 NN denotes RAD51
T2634 10062-10064 IN denotes in
T2635 10065-10066 DT denotes a
T2636 10067-10071 NN denotes form
T2637 10072-10076 WDT denotes that
T2638 10077-10079 VBZ denotes is
T2639 10080-10082 IN denotes in
T2640 10083-10084 DT denotes a
T2641 10085-10090 NN denotes state
T2642 10091-10093 IN denotes of
T2643 10094-10095 `` denotes '
T2644 10095-10104 NN denotes readiness
T2645 10104-10105 '' denotes '
T2646 10106-10107 -LRB- denotes (
T2648 10107-10111 NNP denotes Fig.
T2647 10112-10114 NNP denotes 2a
T2649 10114-10115 -RRB- denotes )
T2650 10115-10116 . denotes .
T2651 10116-10283 sentence denotes In the absence of this interaction with BRCA2, RAD51 might exist in a form that is not capable of being recruited into a functional repair complex when damage occurs.
T2652 10117-10119 IN denotes In
T2654 10120-10123 DT denotes the
T2655 10124-10131 NN denotes absence
T2656 10132-10134 IN denotes of
T2657 10135-10139 DT denotes this
T2658 10140-10151 NN denotes interaction
T2659 10152-10156 IN denotes with
T2660 10157-10162 NN denotes BRCA2
T2661 10162-10164 , denotes ,
T2662 10164-10169 NN denotes RAD51
T2663 10170-10175 MD denotes might
T2653 10176-10181 VB denotes exist
T2664 10182-10184 IN denotes in
T2665 10185-10186 DT denotes a
T2666 10187-10191 NN denotes form
T2667 10192-10196 WDT denotes that
T2668 10197-10199 VBZ denotes is
T2669 10200-10203 RB denotes not
T2670 10204-10211 JJ denotes capable
T2671 10212-10214 IN denotes of
T2672 10215-10220 VBG denotes being
T2673 10221-10230 VBN denotes recruited
T2674 10231-10235 IN denotes into
T2675 10236-10237 DT denotes a
T2677 10238-10248 JJ denotes functional
T2678 10249-10255 NN denotes repair
T2676 10256-10263 NN denotes complex
T2679 10264-10268 WRB denotes when
T2681 10269-10275 NN denotes damage
T2680 10276-10282 VBZ denotes occurs
T2682 10282-10283 . denotes .
T2683 10283-10435 sentence denotes For example, previous studies indicated that RAD51 shows little binding preference for single-strand DNA (ssDNA) over double-strand DNA (dsDNA) [3,29].
T2684 10284-10287 IN denotes For
T2686 10288-10295 NN denotes example
T2687 10295-10297 , denotes ,
T2688 10297-10305 JJ denotes previous
T2689 10306-10313 NNS denotes studies
T2685 10314-10323 VBD denotes indicated
T2690 10324-10328 IN denotes that
T2692 10329-10334 NN denotes RAD51
T2691 10335-10340 VBZ denotes shows
T2693 10341-10347 JJ denotes little
T2695 10348-10355 NN denotes binding
T2694 10356-10366 NN denotes preference
T2696 10367-10370 IN denotes for
T2697 10371-10377 JJ denotes single
T2699 10377-10378 HYPH denotes -
T2698 10378-10384 NN denotes strand
T2700 10385-10388 NN denotes DNA
T2701 10389-10390 -LRB- denotes (
T2702 10390-10395 NN denotes ssDNA
T2703 10395-10396 -RRB- denotes )
T2704 10397-10401 IN denotes over
T2705 10402-10408 JJ denotes double
T2707 10408-10409 HYPH denotes -
T2706 10409-10415 NN denotes strand
T2708 10416-10419 NN denotes DNA
T2709 10420-10421 -LRB- denotes (
T2710 10421-10426 NN denotes dsDNA
T2711 10426-10427 -RRB- denotes )
T2712 10428-10429 -LRB- denotes [
T2714 10429-10430 CD denotes 3
T2715 10430-10431 , denotes ,
T2713 10431-10433 CD denotes 29
T2716 10433-10434 -RRB- denotes ]
T2717 10434-10435 . denotes .
T2718 10435-10607 sentence denotes This result could mean that regulatory factors, such as BRCA2, are required to suppress RAD51–dsDNA interactions to prevent sequestration of RAD51 in a nonfunctional form.
T2719 10436-10440 DT denotes This
T2720 10441-10447 NN denotes result
T2722 10448-10453 MD denotes could
T2721 10454-10458 VB denotes mean
T2723 10459-10463 IN denotes that
T2725 10464-10474 JJ denotes regulatory
T2726 10475-10482 NNS denotes factors
T2727 10482-10484 , denotes ,
T2728 10484-10488 JJ denotes such
T2729 10489-10491 IN denotes as
T2730 10492-10497 NN denotes BRCA2
T2731 10497-10499 , denotes ,
T2732 10499-10502 VBP denotes are
T2724 10503-10511 VBN denotes required
T2733 10512-10514 TO denotes to
T2734 10515-10523 VB denotes suppress
T2735 10524-10529 NN denotes RAD51
T2737 10529-10530 HYPH denotes
T2736 10530-10535 NN denotes dsDNA
T2738 10536-10548 NNS denotes interactions
T2739 10549-10551 TO denotes to
T2740 10552-10559 VB denotes prevent
T2741 10560-10573 NN denotes sequestration
T2742 10574-10576 IN denotes of
T2743 10577-10582 NN denotes RAD51
T2744 10583-10585 IN denotes in
T2745 10586-10587 DT denotes a
T2747 10588-10601 JJ denotes nonfunctional
T2746 10602-10606 NN denotes form
T2748 10606-10607 . denotes .
T2749 10607-10795 sentence denotes Alternatively, or in addition, suppression of RAD51–ssDNA interaction might be important for preventing RAD51 from binding to the regions of ssDNA that form during normal DNA replication.
T2750 10608-10621 RB denotes Alternatively
T2752 10621-10623 , denotes ,
T2753 10623-10625 CC denotes or
T2751 10626-10628 IN denotes in
T2755 10629-10637 NN denotes addition
T2756 10637-10639 , denotes ,
T2757 10639-10650 NN denotes suppression
T2758 10651-10653 IN denotes of
T2759 10654-10659 NN denotes RAD51
T2761 10659-10660 HYPH denotes
T2760 10660-10665 NN denotes ssDNA
T2762 10666-10677 NN denotes interaction
T2763 10678-10683 MD denotes might
T2754 10684-10686 VB denotes be
T2764 10687-10696 JJ denotes important
T2765 10697-10700 IN denotes for
T2766 10701-10711 VBG denotes preventing
T2767 10712-10717 NN denotes RAD51
T2768 10718-10722 IN denotes from
T2769 10723-10730 VBG denotes binding
T2770 10731-10733 IN denotes to
T2771 10734-10737 DT denotes the
T2772 10738-10745 NNS denotes regions
T2773 10746-10748 IN denotes of
T2774 10749-10754 NN denotes ssDNA
T2775 10755-10759 WDT denotes that
T2776 10760-10764 VBP denotes form
T2777 10765-10771 IN denotes during
T2778 10772-10778 JJ denotes normal
T2780 10779-10782 NN denotes DNA
T2779 10783-10794 NN denotes replication
T2781 10794-10795 . denotes .
T2782 10795-11063 sentence denotes BRCA2 may thus promote RAD51 assembly into recombinational repair complexes via a negative regulatory mechanism (i.e. by blocking RAD51–BRCA2 interaction until damage has occurred and factors required for 'productive' assembly of RAD51 at damaged sites are in place).
T2783 10796-10801 NN denotes BRCA2
T2785 10802-10805 MD denotes may
T2786 10806-10810 RB denotes thus
T2784 10811-10818 VB denotes promote
T2787 10819-10824 NN denotes RAD51
T2788 10825-10833 NN denotes assembly
T2789 10834-10838 IN denotes into
T2790 10839-10854 JJ denotes recombinational
T2792 10855-10861 NN denotes repair
T2791 10862-10871 NNS denotes complexes
T2793 10872-10875 IN denotes via
T2794 10876-10877 DT denotes a
T2796 10878-10886 JJ denotes negative
T2797 10887-10897 JJ denotes regulatory
T2795 10898-10907 NN denotes mechanism
T2798 10908-10909 -LRB- denotes (
T2799 10909-10913 FW denotes i.e.
T2800 10914-10916 IN denotes by
T2801 10917-10925 VBG denotes blocking
T2802 10926-10937 NN denotes RAD51–BRCA2
T2803 10938-10949 NN denotes interaction
T2804 10950-10955 IN denotes until
T2806 10956-10962 NN denotes damage
T2807 10963-10966 VBZ denotes has
T2805 10967-10975 VBN denotes occurred
T2808 10976-10979 CC denotes and
T2809 10980-10987 NNS denotes factors
T2811 10988-10996 VBN denotes required
T2812 10997-11000 IN denotes for
T2813 11001-11002 `` denotes '
T2814 11002-11012 JJ denotes productive
T2816 11012-11013 '' denotes '
T2815 11014-11022 NN denotes assembly
T2817 11023-11025 IN denotes of
T2818 11026-11031 NN denotes RAD51
T2819 11032-11034 IN denotes at
T2820 11035-11042 JJ denotes damaged
T2821 11043-11048 NNS denotes sites
T2810 11049-11052 VBP denotes are
T2822 11053-11055 IN denotes in
T2823 11056-11061 NN denotes place
T2824 11061-11062 -RRB- denotes )
T2825 11062-11063 . denotes .
T2826 11063-11250 sentence denotes As mentioned previously, the ability of a BRC peptide to repress the RAD51–BRCA2 interaction could reflect a role of full-length protein in suppressing unwanted RAD51–BRCA2 interactions.
T2827 11064-11066 IN denotes As
T2828 11067-11076 VBN denotes mentioned
T2830 11077-11087 RB denotes previously
T2831 11087-11089 , denotes ,
T2832 11089-11092 DT denotes the
T2833 11093-11100 NN denotes ability
T2834 11101-11103 IN denotes of
T2835 11104-11105 DT denotes a
T2837 11106-11109 NN denotes BRC
T2836 11110-11117 NN denotes peptide
T2838 11118-11120 TO denotes to
T2839 11121-11128 VB denotes repress
T2840 11129-11132 DT denotes the
T2842 11133-11138 NN denotes RAD51
T2843 11138-11139 HYPH denotes
T2844 11139-11144 NN denotes BRCA2
T2841 11145-11156 NN denotes interaction
T2845 11157-11162 MD denotes could
T2829 11163-11170 VB denotes reflect
T2846 11171-11172 DT denotes a
T2847 11173-11177 NN denotes role
T2848 11178-11180 IN denotes of
T2849 11181-11185 JJ denotes full
T2851 11185-11186 HYPH denotes -
T2850 11186-11192 NN denotes length
T2852 11193-11200 NN denotes protein
T2853 11201-11203 IN denotes in
T2854 11204-11215 VBG denotes suppressing
T2855 11216-11224 JJ denotes unwanted
T2857 11225-11230 NN denotes RAD51
T2859 11230-11231 HYPH denotes
T2858 11231-11236 NN denotes BRCA2
T2856 11237-11249 NNS denotes interactions
T2860 11249-11250 . denotes .
T2861 11250-12442 sentence denotes Figure 2 Potential roles of BRCA2 in promoting assembly of Rad51 at sites of DNA damage. Chromosomal DNA is shown as pairs of straight lines, Rad51 as open circles, and BRCA2 as grey bars. (a) Prevention of nonproductive DNA interactions. BRCA2–Rad51 interaction is proposed to suppress RAD51–BRCA2 interactions until DNA damage is present. When damage occurs, Rad51 is recruited to damaged sites where is polymerizes into nucleoprotein filaments. In this model, BRCA2 is not required for assembly of functional complexes at damaged sites, only to prevent a substantial fraction of Rad51 from being sequestered in a nonfunctional form. In a BRCA2-defective cell, mutant Rad51 becomes associated with DNA at random sites and is therefore not readily recruited to sites of damage. (b) Positive regulation. BRCA2 is proposed to be required for Rad51 to assemble into functional recombinational repair complexes at sites of damage. In BRCA-defective cells, Rad51 fails to associate with sites of damage due to lack of an assembly factor. Yet another potential role for BRCA2 in promoting RAD51-dependent recombinational repair is a positive role in assembly of RAD51 at damaged sites (Fig. 2b).
T2862 12286-12289 RB denotes Yet
T2864 12290-12297 DT denotes another
T2865 12298-12307 JJ denotes potential
T2863 12308-12312 NN denotes role
T2867 12313-12316 IN denotes for
T2868 12317-12322 NN denotes BRCA2
T2869 12323-12325 IN denotes in
T2870 12326-12335 VBG denotes promoting
T2871 12336-12341 NN denotes RAD51
T2873 12341-12342 HYPH denotes -
T2872 12342-12351 JJ denotes dependent
T2875 12352-12367 JJ denotes recombinational
T2874 12368-12374 NN denotes repair
T2866 12375-12377 VBZ denotes is
T2876 12378-12379 DT denotes a
T2878 12380-12388 JJ denotes positive
T2877 12389-12393 NN denotes role
T2879 12394-12396 IN denotes in
T2880 12397-12405 NN denotes assembly
T2881 12406-12408 IN denotes of
T2882 12409-12414 NN denotes RAD51
T2883 12415-12417 IN denotes at
T2884 12418-12425 VBN denotes damaged
T2885 12426-12431 NNS denotes sites
T2886 12432-12433 -LRB- denotes (
T2888 12433-12437 NN denotes Fig.
T2887 12438-12440 NN denotes 2b
T2889 12440-12441 -RRB- denotes )
T2890 12441-12442 . denotes .
T2891 12442-12570 sentence denotes Several proteins that interact with RAD51 are thought to 'mediate' assembly of RAD51 at sites of DNA damage (reviewed in [30]).
T2892 12443-12450 JJ denotes Several
T2893 12451-12459 NN denotes proteins
T2895 12460-12464 WDT denotes that
T2896 12465-12473 VBP denotes interact
T2897 12474-12478 IN denotes with
T2898 12479-12484 NN denotes RAD51
T2899 12485-12488 VBP denotes are
T2894 12489-12496 VBN denotes thought
T2900 12497-12499 TO denotes to
T2902 12500-12501 `` denotes '
T2901 12501-12508 VB denotes mediate
T2903 12508-12509 '' denotes '
T2904 12510-12518 NN denotes assembly
T2905 12519-12521 IN denotes of
T2906 12522-12527 NN denotes RAD51
T2907 12528-12530 IN denotes at
T2908 12531-12536 NNS denotes sites
T2909 12537-12539 IN denotes of
T2910 12540-12543 NN denotes DNA
T2911 12544-12550 NN denotes damage
T2912 12551-12552 -LRB- denotes (
T2913 12552-12560 VBN denotes reviewed
T2914 12561-12563 IN denotes in
T2915 12564-12565 -LRB- denotes [
T2916 12565-12567 CD denotes 30
T2917 12567-12568 -RRB- denotes ]
T2918 12568-12569 -RRB- denotes )
T2919 12569-12570 . denotes .
T2920 12570-12721 sentence denotes RAD51 paralogs in particular, including XRCC2, XRCC3, RAD51B, RAD51C and RAD51D, may function as a complex that actively promotes RAD51 assembly [31].
T2921 12571-12576 NN denotes RAD51
T2922 12577-12585 NNS denotes paralogs
T2924 12586-12588 IN denotes in
T2925 12589-12599 JJ denotes particular
T2926 12599-12601 , denotes ,
T2927 12601-12610 VBG denotes including
T2928 12611-12616 NN denotes XRCC2
T2929 12616-12618 , denotes ,
T2930 12618-12623 NN denotes XRCC3
T2931 12623-12625 , denotes ,
T2932 12625-12631 NN denotes RAD51B
T2933 12631-12633 , denotes ,
T2934 12633-12639 NN denotes RAD51C
T2935 12640-12643 CC denotes and
T2936 12644-12650 NN denotes RAD51D
T2937 12650-12652 , denotes ,
T2938 12652-12655 MD denotes may
T2923 12656-12664 VB denotes function
T2939 12665-12667 IN denotes as
T2940 12668-12669 DT denotes a
T2941 12670-12677 NN denotes complex
T2942 12678-12682 WDT denotes that
T2944 12683-12691 RB denotes actively
T2943 12692-12700 VBZ denotes promotes
T2945 12701-12706 NN denotes RAD51
T2946 12707-12715 NN denotes assembly
T2947 12716-12717 -LRB- denotes [
T2948 12717-12719 CD denotes 31
T2949 12719-12720 -RRB- denotes ]
T2950 12720-12721 . denotes .
T2951 12721-12841 sentence denotes BRCA2 could cooperate with RAD51 paralogs in promoting RAD51 assembly, or even provide an alternative assembly pathway.
T2952 12722-12727 NN denotes BRCA2
T2954 12728-12733 MD denotes could
T2953 12734-12743 VB denotes cooperate
T2955 12744-12748 IN denotes with
T2956 12749-12754 NN denotes RAD51
T2957 12755-12763 NNS denotes paralogs
T2958 12764-12766 IN denotes in
T2959 12767-12776 VBG denotes promoting
T2960 12777-12782 NN denotes RAD51
T2961 12783-12791 NN denotes assembly
T2962 12791-12793 , denotes ,
T2963 12793-12795 CC denotes or
T2964 12796-12800 RB denotes even
T2965 12801-12808 VB denotes provide
T2966 12809-12811 DT denotes an
T2968 12812-12823 JJ denotes alternative
T2969 12824-12832 NN denotes assembly
T2967 12833-12840 NN denotes pathway
T2970 12840-12841 . denotes .
T2971 12841-13041 sentence denotes The observation that BRCA2 localizes to damage-induced subnuclear foci with RAD51 seems consistent with the possibility that BRCA2 plays a positive role in assembly of the recombination complex [11].
T2972 12842-12845 DT denotes The
T2973 12846-12857 NN denotes observation
T2975 12858-12862 IN denotes that
T2977 12863-12868 NN denotes BRCA2
T2976 12869-12878 VBZ denotes localizes
T2978 12879-12881 IN denotes to
T2979 12882-12888 NN denotes damage
T2981 12888-12889 HYPH denotes -
T2980 12889-12896 VBN denotes induced
T2983 12897-12907 JJ denotes subnuclear
T2982 12908-12912 NNS denotes foci
T2984 12913-12917 IN denotes with
T2985 12918-12923 NN denotes RAD51
T2974 12924-12929 VBZ denotes seems
T2986 12930-12940 JJ denotes consistent
T2987 12941-12945 IN denotes with
T2988 12946-12949 DT denotes the
T2989 12950-12961 NN denotes possibility
T2990 12962-12966 IN denotes that
T2992 12967-12972 NN denotes BRCA2
T2991 12973-12978 VBZ denotes plays
T2993 12979-12980 DT denotes a
T2995 12981-12989 JJ denotes positive
T2994 12990-12994 NN denotes role
T2996 12995-12997 IN denotes in
T2997 12998-13006 NN denotes assembly
T2998 13007-13009 IN denotes of
T2999 13010-13013 DT denotes the
T3001 13014-13027 NN denotes recombination
T3000 13028-13035 NN denotes complex
T3002 13036-13037 -LRB- denotes [
T3003 13037-13039 CD denotes 11
T3004 13039-13040 -RRB- denotes ]
T3005 13040-13041 . denotes .
T3006 13041-13188 sentence denotes Finally, it is important to note that the two models for the function of the BRCA2–RAD51 interaction shown in Figure 2 are not mutually exclusive.
T3007 13042-13049 RB denotes Finally
T3009 13049-13051 , denotes ,
T3010 13051-13053 PRP denotes it
T3008 13054-13056 VBZ denotes is
T3011 13057-13066 JJ denotes important
T3012 13067-13069 TO denotes to
T3013 13070-13074 VB denotes note
T3014 13075-13079 IN denotes that
T3016 13080-13083 DT denotes the
T3018 13084-13087 CD denotes two
T3017 13088-13094 NNS denotes models
T3019 13095-13098 IN denotes for
T3020 13099-13102 DT denotes the
T3021 13103-13111 NN denotes function
T3022 13112-13114 IN denotes of
T3023 13115-13118 DT denotes the
T3025 13119-13124 NN denotes BRCA2
T3027 13124-13125 HYPH denotes
T3026 13125-13130 NN denotes RAD51
T3024 13131-13142 NN denotes interaction
T3028 13143-13148 VBN denotes shown
T3029 13149-13151 IN denotes in
T3030 13152-13158 NN denotes Figure
T3031 13159-13160 CD denotes 2
T3015 13161-13164 VBP denotes are
T3032 13165-13168 RB denotes not
T3033 13169-13177 RB denotes mutually
T3034 13178-13187 JJ denotes exclusive
T3035 13187-13188 . denotes .
T3036 13188-13343 sentence denotes BRCA2 could prevent inappropriate RAD51 assembly in the absence of damage and promote functional RAD51 assembly at DNA lesions during the damage response.
T3037 13189-13194 NN denotes BRCA2
T3039 13195-13200 MD denotes could
T3038 13201-13208 VB denotes prevent
T3040 13209-13222 JJ denotes inappropriate
T3042 13223-13228 NN denotes RAD51
T3041 13229-13237 NN denotes assembly
T3043 13238-13240 IN denotes in
T3044 13241-13244 DT denotes the
T3045 13245-13252 NN denotes absence
T3046 13253-13255 IN denotes of
T3047 13256-13262 NN denotes damage
T3048 13263-13266 CC denotes and
T3049 13267-13274 VB denotes promote
T3050 13275-13285 JJ denotes functional
T3052 13286-13291 NN denotes RAD51
T3051 13292-13300 NN denotes assembly
T3053 13301-13303 IN denotes at
T3054 13304-13307 NN denotes DNA
T3055 13308-13315 NNS denotes lesions
T3056 13316-13322 IN denotes during
T3057 13323-13326 DT denotes the
T3059 13327-13333 NN denotes damage
T3058 13334-13342 NN denotes response
T3060 13342-13343 . denotes .
T3061 13343-13478 sentence denotes Further experiments are clearly required to clarify the functional interactions between BRCA2 and RAD51 during recombinational repair.
T3062 13344-13351 JJ denotes Further
T3063 13352-13363 NNS denotes experiments
T3065 13364-13367 VBP denotes are
T3066 13368-13375 RB denotes clearly
T3064 13376-13384 VBN denotes required
T3067 13385-13387 TO denotes to
T3068 13388-13395 VB denotes clarify
T3069 13396-13399 DT denotes the
T3071 13400-13410 JJ denotes functional
T3070 13411-13423 NNS denotes interactions
T3072 13424-13431 IN denotes between
T3073 13432-13437 NN denotes BRCA2
T3074 13438-13441 CC denotes and
T3075 13442-13447 NN denotes RAD51
T3076 13448-13454 IN denotes during
T3077 13455-13470 JJ denotes recombinational
T3078 13471-13477 NN denotes repair
T3079 13477-13478 . denotes .
T3080 13478-13606 sentence denotes It should be relatively straightforward to determine whether the role of BRCA2 is limited to transporting RAD51 to the nucleus.
T3081 13479-13481 PRP denotes It
T3083 13482-13488 MD denotes should
T3082 13489-13491 VB denotes be
T3084 13492-13502 RB denotes relatively
T3085 13503-13518 JJ denotes straightforward
T3086 13519-13521 TO denotes to
T3087 13522-13531 VB denotes determine
T3088 13532-13539 IN denotes whether
T3090 13540-13543 DT denotes the
T3091 13544-13548 NN denotes role
T3092 13549-13551 IN denotes of
T3093 13552-13557 NN denotes BRCA2
T3094 13558-13560 VBZ denotes is
T3089 13561-13568 VBN denotes limited
T3095 13569-13571 IN denotes to
T3096 13572-13584 VBG denotes transporting
T3097 13585-13590 NN denotes RAD51
T3098 13591-13593 IN denotes to
T3099 13594-13597 DT denotes the
T3100 13598-13605 NN denotes nucleus
T3101 13605-13606 . denotes .
T3102 13606-13760 sentence denotes If this were the case, addition of a nuclear localization signal to RAD51 should suppress the RAD51-mediated phenotypes associated with a BRCA2 mutation.
T3103 13607-13609 IN denotes If
T3105 13610-13614 DT denotes this
T3104 13615-13619 VBD denotes were
T3107 13620-13623 DT denotes the
T3108 13624-13628 NN denotes case
T3109 13628-13630 , denotes ,
T3110 13630-13638 NN denotes addition
T3111 13639-13641 IN denotes of
T3112 13642-13643 DT denotes a
T3114 13644-13651 JJ denotes nuclear
T3115 13652-13664 NN denotes localization
T3113 13665-13671 NN denotes signal
T3116 13672-13674 IN denotes to
T3117 13675-13680 NN denotes RAD51
T3118 13681-13687 MD denotes should
T3106 13688-13696 VB denotes suppress
T3119 13697-13700 DT denotes the
T3121 13701-13706 NN denotes RAD51
T3123 13706-13707 HYPH denotes -
T3122 13707-13715 VBN denotes mediated
T3120 13716-13726 NNS denotes phenotypes
T3124 13727-13737 VBN denotes associated
T3125 13738-13742 IN denotes with
T3126 13743-13744 DT denotes a
T3128 13745-13750 NN denotes BRCA2
T3127 13751-13759 NN denotes mutation
T3129 13759-13760 . denotes .
T3130 13760-13887 sentence denotes However, biochemical experiments are needed to determine whether full-length BRCA2 blocks or promotes RAD51–BRCA2 interaction.
T3131 13761-13768 RB denotes However
T3133 13768-13770 , denotes ,
T3134 13770-13781 JJ denotes biochemical
T3135 13782-13793 NNS denotes experiments
T3136 13794-13797 VBP denotes are
T3132 13798-13804 VBN denotes needed
T3137 13805-13807 TO denotes to
T3138 13808-13817 VB denotes determine
T3139 13818-13825 IN denotes whether
T3141 13826-13830 JJ denotes full
T3143 13830-13831 HYPH denotes -
T3142 13831-13837 NN denotes length
T3144 13838-13843 NN denotes BRCA2
T3140 13844-13850 VBZ denotes blocks
T3145 13851-13853 CC denotes or
T3146 13854-13862 VBZ denotes promotes
T3147 13863-13868 NN denotes RAD51
T3149 13868-13869 HYPH denotes
T3148 13869-13874 NN denotes BRCA2
T3150 13875-13886 NN denotes interaction
T3151 13886-13887 . denotes .
T3152 13887-13976 sentence denotes Such experiments could also reveal additional roles for BRCA2 in recombinational repair.
T3153 13888-13892 JJ denotes Such
T3154 13893-13904 NNS denotes experiments
T3156 13905-13910 MD denotes could
T3157 13911-13915 RB denotes also
T3155 13916-13922 VB denotes reveal
T3158 13923-13933 JJ denotes additional
T3159 13934-13939 NNS denotes roles
T3160 13940-13943 IN denotes for
T3161 13944-13949 NN denotes BRCA2
T3162 13950-13952 IN denotes in
T3163 13953-13968 JJ denotes recombinational
T3164 13969-13975 NN denotes repair
T3165 13975-13976 . denotes .
T3166 13976-14123 sentence denotes However, several technical obstacles, including the large size of BRCA2, promise to make biochemical characterization of BRCA2 function difficult.
T3167 13977-13984 RB denotes However
T3169 13984-13986 , denotes ,
T3170 13986-13993 JJ denotes several
T3172 13994-14003 JJ denotes technical
T3171 14004-14013 NNS denotes obstacles
T3173 14013-14015 , denotes ,
T3174 14015-14024 VBG denotes including
T3175 14025-14028 DT denotes the
T3177 14029-14034 JJ denotes large
T3176 14035-14039 NN denotes size
T3178 14040-14042 IN denotes of
T3179 14043-14048 NN denotes BRCA2
T3180 14048-14050 , denotes ,
T3168 14050-14057 VBP denotes promise
T3181 14058-14060 TO denotes to
T3182 14061-14065 VB denotes make
T3183 14066-14077 JJ denotes biochemical
T3184 14078-14094 NN denotes characterization
T3186 14095-14097 IN denotes of
T3187 14098-14103 NN denotes BRCA2
T3188 14104-14112 NN denotes function
T3185 14113-14122 JJ denotes difficult
T3189 14122-14123 . denotes .
R10 T48 T46 dobj evidence,provide
R100 T146 T144 relcl carried,context
R1000 T1467 T1469 compound length,BRCA2
R1001 T1468 T1467 punct -,length
R1002 T1469 T1465 dobj BRCA2,expressing
R1003 T1470 T1471 punct (,was
R1004 T1471 T1469 parataxis was,BRCA2
R1005 T1472 T1473 det the,defect
R1006 T1473 T1471 nsubj defect,was
R1007 T1474 T1473 acl observed,defect
R1008 T1475 T1476 advmod about,sixfold
R1009 T1476 T1471 advmod sixfold,was
R101 T147 T145 pobj which,in
R1010 T1477 T1476 advmod fivefold,sixfold
R1011 T1478 T1476 quantmod to,sixfold
R1012 T1479 T1471 punct ),was
R1013 T1480 T1455 punct .,found
R1014 T1482 T1483 advmod Second,was
R1015 T1484 T1483 punct ", ",was
R1016 T1485 T1483 prep in,was
R1017 T1486 T1487 det an,study
R1018 T1487 T1485 pobj study,in
R1019 T1488 T1487 amod independent,study
R102 T148 T149 det the,studies
R1020 T1489 T1483 punct ", ",was
R1021 T1490 T1483 nsubj Powell,was
R1022 T1491 T1483 acomp able,was
R1023 T1492 T1493 aux to,compare
R1024 T1493 T1491 xcomp compare,able
R1025 T1494 T1493 dobj derivatives,compare
R1026 T1495 T1494 prep of,derivatives
R1027 T1496 T1495 pobj CAPAN,of
R1028 T1497 T1496 punct -,CAPAN
R1029 T1498 T1496 nummod 1,CAPAN
R103 T149 T146 nsubjpass studies,carried
R1030 T1499 T1500 dep that,differed
R1031 T1500 T1494 relcl differed,derivatives
R1032 T1501 T1500 advmod only,differed
R1033 T1502 T1500 prep in,differed
R1034 T1503 T1504 poss their,ability
R1035 T1504 T1502 pobj ability,in
R1036 T1505 T1506 aux to,express
R1037 T1506 T1504 acl express,ability
R1038 T1507 T1508 amod full,length
R1039 T1508 T1510 compound length,protein
R104 T150 T149 nummod two,studies
R1040 T1509 T1508 punct -,length
R1041 T1510 T1506 dobj protein,express
R1042 T1511 T1510 compound BRCA2,protein
R1043 T1512 T1513 punct (,Powell
R1044 T1513 T1493 meta Powell,compare
R1045 T1514 T1513 compound S.,Powell
R1046 T1515 T1513 punct ", ",Powell
R1047 T1516 T1517 amod personal,communication
R1048 T1517 T1513 dep communication,Powell
R1049 T1518 T1513 punct ", ",Powell
R105 T151 T146 auxpass were,carried
R1050 T1519 T1513 npadvmod 2001,Powell
R1051 T1520 T1513 punct ),Powell
R1052 T1521 T1483 punct .,was
R1053 T1523 T1524 prep In,yielded
R1054 T1525 T1526 det these,experiments
R1055 T1526 T1523 pobj experiments,In
R1056 T1527 T1524 punct ", ",yielded
R1057 T1528 T1529 det the,derivative
R1058 T1529 T1524 nsubj derivative,yielded
R1059 T1530 T1529 acl expressing,derivative
R106 T152 T146 prt out,carried
R1060 T1531 T1532 amod full,length
R1061 T1532 T1534 compound length,BRCA2
R1062 T1533 T1532 punct -,length
R1063 T1534 T1530 dobj BRCA2,expressing
R1064 T1535 T1536 advmod 10-fold,more
R1065 T1536 T1537 amod more,recombinants
R1066 T1537 T1524 dobj recombinants,yielded
R1067 T1538 T1537 prep than,recombinants
R1068 T1539 T1538 pobj controls,than
R1069 T1540 T1539 acl expressing,controls
R107 T153 T141 punct ", ",review
R1070 T1541 T1542 advmod only,BRCA2
R1071 T1542 T1540 dobj BRCA2,expressing
R1072 T1543 T1542 amod truncated,BRCA2
R1073 T1544 T1545 punct (,Powell
R1074 T1545 T1524 meta Powell,yielded
R1075 T1546 T1545 compound S.,Powell
R1076 T1547 T1545 punct ", ",Powell
R1077 T1548 T1549 amod personal,communication
R1078 T1549 T1545 dep communication,Powell
R1079 T1550 T1545 punct ", ",Powell
R108 T154 T155 nsubj we,comment
R1080 T1551 T1545 dep 2001,Powell
R1081 T1552 T1545 punct ),Powell
R1082 T1553 T1524 punct .,yielded
R1083 T1555 T1556 mark While,was
R1084 T1556 T1563 advcl was,raise
R1085 T1557 T1558 det the,design
R1086 T1558 T1556 nsubj design,was
R1087 T1559 T1558 amod experimental,design
R1088 T1560 T1558 prep of,design
R1089 T1561 T1562 det these,experiments
R109 T155 T141 conj comment,review
R1090 T1562 T1560 pobj experiments,of
R1091 T1564 T1565 advmod somewhat,different
R1092 T1565 T1556 acomp different,was
R1093 T1566 T1565 prep from,different
R1094 T1567 T1566 pobj that,from
R1095 T1568 T1567 prep of,that
R1096 T1569 T1570 compound Moyna,han
R1097 T1570 T1568 pobj han,of
R1098 T1571 T1570 punct -,han
R1099 T1572 T1573 advmod et,al
R11 T49 T48 amod relevant,evidence
R110 T156 T155 prep on,comment
R1100 T1573 T1570 advmod al,han
R1101 T1574 T1575 punct [,24
R1102 T1575 T1570 parataxis 24,han
R1103 T1576 T1575 punct ],24
R1104 T1577 T1563 punct ", ",raise
R1105 T1578 T1579 det the,results
R1106 T1579 T1563 nsubj results,raise
R1107 T1580 T1581 det the,possibility
R1108 T1581 T1563 dobj possibility,raise
R1109 T1582 T1583 mark that,have
R111 T157 T158 det the,results
R1110 T1583 T1581 acl have,possibility
R1111 T1584 T1585 nmod CAPAN,cells
R1112 T1585 T1583 nsubj cells,have
R1113 T1586 T1584 punct -,CAPAN
R1114 T1587 T1584 nummod 1,CAPAN
R1115 T1588 T1589 amod more,one
R1116 T1589 T1591 nummod one,mutation
R1117 T1590 T1589 quantmod than,one
R1118 T1591 T1583 dobj mutation,have
R1119 T1592 T1593 dep that,lowers
R112 T158 T156 pobj results,on
R1120 T1593 T1591 relcl lowers,mutation
R1121 T1594 T1595 det the,efficiency
R1122 T1595 T1593 dobj efficiency,lowers
R1123 T1596 T1595 prep of,efficiency
R1124 T1597 T1598 amod recombinational,repair
R1125 T1598 T1596 pobj repair,of
R1126 T1599 T1598 amod relative,repair
R1127 T1600 T1599 prep to,relative
R1128 T1601 T1600 pobj that,to
R1129 T1602 T1601 acl observed,that
R113 T159 T158 acl presented,results
R1130 T1603 T1602 prep in,observed
R1131 T1604 T1605 amod other,lines
R1132 T1605 T1603 pobj lines,in
R1133 T1606 T1605 amod human,lines
R1134 T1607 T1605 compound cell,lines
R1135 T1608 T1563 punct .,raise
R1136 T1610 T1611 advmod Conversely,be
R1137 T1612 T1611 punct ", ",be
R1138 T1613 T1614 det the,defect
R1139 T1614 T1611 nsubj defect,be
R114 T160 T155 punct ", ",comment
R1140 T1615 T1614 compound BRCA2,defect
R1141 T1616 T1614 prep in,defect
R1142 T1617 T1616 pobj CAPAN,in
R1143 T1618 T1617 punct -,CAPAN
R1144 T1619 T1617 nummod 1,CAPAN
R1145 T1621 T1622 advmod fully,responsible
R1146 T1622 T1611 acomp responsible,be
R1147 T1623 T1622 prep for,responsible
R1148 T1624 T1625 det the,defect
R1149 T1625 T1623 pobj defect,for
R115 T161 T155 cc and,comment
R1150 T1620 T1611 aux could,be
R1151 T1627 T1625 prep in,defect
R1152 T1628 T1627 pobj recombination,in
R1153 T1626 T1625 amod 100-fold,defect
R1154 T1630 T1611 advcl was,be
R1155 T1631 T1632 det the,level
R1156 T1629 T1630 mark if,was
R1157 T1633 T1632 prep of,level
R1158 T1634 T1635 compound BRCA2,complementation
R1159 T1632 T1630 nsubj level,was
R116 T162 T163 nsubj we,discuss
R1160 T1636 T1632 acl observed,level
R1161 T1637 T1636 agent by,observed
R1162 T1638 T1637 pobj Powell,by
R1163 T1639 T1630 acomp incomplete,was
R1164 T1635 T1633 pobj complementation,of
R1165 T1642 T1643 advmod Furthermore,accounted
R1166 T1640 T1611 punct .,be
R1167 T1644 T1643 punct ", ",accounted
R1168 T1645 T1646 det the,discrepancy
R1169 T1647 T1646 prep between,discrepancy
R117 T163 T155 conj discuss,comment
R1170 T1648 T1649 det the,difference
R1171 T1646 T1643 nsubjpass discrepancy,accounted
R1172 T1650 T1649 amod 100-fold,difference
R1173 T1651 T1649 prep between,difference
R1174 T1649 T1647 pobj difference,between
R1175 T1653 T1652 punct -,CAPAN
R1176 T1654 T1652 nummod 1,CAPAN
R1177 T1652 T1651 pobj CAPAN,between
R1178 T1656 T1657 det the,lines
R1179 T1657 T1652 conj lines,CAPAN
R118 T164 T163 dobj models,discuss
R1180 T1655 T1652 cc and,CAPAN
R1181 T1659 T1657 amod human,lines
R1182 T1660 T1646 prep as,discrepancy
R1183 T1658 T1657 amod other,lines
R1184 T1662 T1661 prep with,compared
R1185 T1661 T1660 prep compared,as
R1186 T1664 T1662 pobj difference,with
R1187 T1663 T1664 det the,difference
R1188 T1666 T1664 nummod sixfold,difference
R1189 T1665 T1666 amod fivefold,sixfold
R119 T165 T164 acl designed,models
R1190 T1668 T1664 prep between,difference
R1191 T1669 T1670 det the,cells
R1192 T1667 T1666 quantmod to,sixfold
R1193 T1671 T1672 compound Brca2lex1,lex2
R1194 T1672 T1670 compound lex2,cells
R1195 T1670 T1668 pobj cells,between
R1196 T1674 T1670 cc and,cells
R1197 T1675 T1676 nmod Brca2,cells
R1198 T1673 T1672 punct /,lex2
R1199 T1677 T1675 punct +,Brca2
R12 T50 T49 prep to,relevant
R120 T166 T167 aux to,account
R1200 T1678 T1675 punct /,Brca2
R1201 T1679 T1675 punct +,Brca2
R1202 T1676 T1670 conj cells,cells
R1203 T1681 T1643 aux might,accounted
R1204 T1682 T1643 advmod simply,accounted
R1205 T1680 T1676 compound ES,cells
R1206 T1684 T1643 prep for,accounted
R1207 T1685 T1643 prep by,accounted
R1208 T1683 T1643 auxpass be,accounted
R1209 T1687 T1685 pobj fact,by
R121 T167 T165 advcl account,designed
R1210 T1688 T1689 mark that,is
R1211 T1686 T1687 det the,fact
R1212 T1690 T1691 compound Brca2lex1,lex2
R1213 T1691 T1689 nsubj lex2,is
R1214 T1689 T1687 acl is,fact
R1215 T1693 T1689 neg not,is
R1216 T1694 T1695 det a,allele
R1217 T1692 T1691 punct /,lex2
R1218 T1696 T1695 amod null,allele
R1219 T1697 T1643 punct .,accounted
R122 T168 T167 prep for,account
R1220 T1695 T1689 attr allele,is
R1221 T1699 T1700 amod Additional,studies
R1222 T1700 T1701 nsubj studies,are
R1223 T1702 T1701 acomp likely,are
R1224 T1704 T1702 xcomp shed,likely
R1225 T1705 T1704 dobj light,shed
R1226 T1703 T1704 aux to,shed
R1227 T1707 T1708 det the,efficiency
R1228 T1708 T1706 pobj efficiency,on
R1229 T1706 T1704 prep on,shed
R123 T169 T170 det the,role
R1230 T1710 T1711 npadvmod BRCA2,independent
R1231 T1711 T1713 amod independent,pathways
R1232 T1709 T1708 prep of,efficiency
R1233 T1713 T1709 pobj pathways,of
R1234 T1714 T1713 compound recombination,pathways
R1235 T1712 T1711 punct -,independent
R1236 T1719 T1717 advmod together,Taken
R1237 T1715 T1701 punct .,are
R1238 T1720 T1718 punct ", ",indicate
R1239 T1717 T1718 advcl Taken,indicate
R124 T170 T168 pobj role,for
R1240 T1722 T1718 nsubj results,indicate
R1241 T1721 T1722 det the,results
R1242 T1724 T1718 ccomp required,indicate
R1243 T1725 T1724 nsubjpass BRCA2,required
R1244 T1723 T1724 mark that,required
R1245 T1727 T1724 advmod indeed,required
R1246 T1728 T1724 prep for,required
R1247 T1726 T1724 auxpass is,required
R1248 T1730 T1728 pobj levels,for
R1249 T1729 T1730 amod high,levels
R125 T171 T170 prep of,role
R1250 T1732 T1733 amod recombinational,repair
R1251 T1733 T1731 pobj repair,of
R1252 T1731 T1730 prep of,levels
R1253 T1735 T1736 preconj both,mouse
R1254 T1734 T1724 prep in,required
R1255 T1737 T1736 amod human,mouse
R1256 T1738 T1736 cc and,mouse
R1257 T1736 T1734 pobj mouse,in
R1258 T1739 T1718 punct .,indicate
R126 T172 T171 pobj BRCA2,of
R1262 T2154 T2155 det The,paper
R1263 T2155 T2157 nsubj paper,is
R1264 T2156 T2155 amod second,paper
R1265 T2158 T2155 acl providing,paper
R1266 T2159 T2158 dobj evidence,providing
R1267 T2160 T2155 punct ", ",paper
R1268 T2161 T2155 prep by,paper
R1269 T2162 T2161 pobj Davies,by
R127 T173 T170 prep in,role
R1270 T2163 T2164 advmod et,al
R1271 T2164 T2162 advmod al,Davies
R1272 T2165 T2166 punct [,26
R1273 T2166 T2155 parataxis 26,paper
R1274 T2167 T2166 punct ],26
R1275 T2168 T2157 punct ", ",is
R1276 T2169 T2170 det a,study
R1277 T2170 T2157 attr study,is
R1278 T2171 T2170 amod biochemical,study
R1279 T2172 T2170 prep of,study
R128 T174 T175 npadvmod RAD51,mediated
R1280 T2173 T2174 det the,interaction
R1281 T2174 T2172 pobj interaction,of
R1282 T2175 T2174 prep between,interaction
R1283 T2176 T2177 det the,RAD51
R1284 T2177 T2175 pobj RAD51,between
R1285 T2178 T2177 amod homologous,RAD51
R1286 T2179 T2177 compound recombinase,RAD51
R1287 T2180 T2177 cc and,RAD51
R1288 T2181 T2182 det a,peptide
R1289 T2182 T2177 conj peptide,RAD51
R129 T175 T177 amod mediated,repair
R1290 T2183 T2182 acl consisting,peptide
R1291 T2184 T2183 prep of,consisting
R1292 T2185 T2184 pobj one,of
R1293 T2186 T2185 prep of,one
R1294 T2187 T2188 det the,repeats
R1295 T2188 T2186 pobj repeats,of
R1296 T2189 T2188 nummod eight,repeats
R1297 T2190 T2188 compound BRC,repeats
R1298 T2191 T2188 prep from,repeats
R1299 T2192 T2193 amod human,BRCA2
R13 T51 T52 det the,role
R130 T176 T175 punct –,mediated
R1300 T2193 T2191 pobj BRCA2,from
R1301 T2194 T2157 punct .,is
R1302 T2196 T2197 nsubjpass Expression,reported
R1303 T2198 T2196 prep of,Expression
R1304 T2199 T2200 det a,repeat
R1305 T2200 T2198 pobj repeat,of
R1306 T2201 T2200 amod single,repeat
R1307 T2202 T2200 compound BRC,repeat
R1308 T2203 T2200 punct (,repeat
R1309 T2204 T2200 appos BRC4,repeat
R131 T177 T173 pobj repair,in
R1310 T2205 T2197 punct ),reported
R1311 T2206 T2197 aux had,reported
R1312 T2207 T2197 advmod previously,reported
R1313 T2208 T2197 auxpass been,reported
R1314 T2209 T2210 aux to,act
R1315 T2210 T2197 xcomp act,reported
R1316 T2211 T2210 prep as,act
R1317 T2212 T2213 det an,inhibitor
R1318 T2213 T2211 pobj inhibitor,as
R1319 T2214 T2213 prep of,inhibitor
R132 T178 T163 punct .,discuss
R1320 T2215 T2216 compound DNA,repair
R1321 T2216 T2214 pobj repair,of
R1322 T2217 T2197 agent by,reported
R1323 T2218 T2217 pobj Chen,by
R1324 T2219 T2220 advmod et,al
R1325 T2220 T2218 advmod al,Chen
R1326 T2221 T2222 punct [,27
R1327 T2222 T2197 parataxis 27,reported
R1328 T2223 T2222 punct ],27
R1329 T2224 T2197 punct .,reported
R1330 T2226 T2227 det These,investigators
R1331 T2227 T2228 nsubj investigators,showed
R1332 T2229 T2230 mark that,enhances
R1333 T2230 T2228 ccomp enhances,showed
R1334 T2231 T2230 nsubj expression,enhances
R1335 T2232 T2231 prep of,expression
R1336 T2233 T2232 pobj constructs,of
R1337 T2234 T2233 acl containing,constructs
R1338 T2235 T2236 det the,repeat
R1339 T2236 T2234 dobj repeat,containing
R1340 T2237 T2236 compound BRC4,repeat
R1341 T2238 T2236 prep in,repeat
R1342 T2239 T2240 nmod MCF,cells
R1343 T2240 T2238 pobj cells,in
R1344 T2241 T2239 punct -,MCF
R1345 T2242 T2239 nummod 7,MCF
R1346 T2243 T2244 det the,radiosensitivity
R1347 T2244 T2230 dobj radiosensitivity,enhances
R1348 T2245 T2244 prep of,radiosensitivity
R1349 T2246 T2245 pobj cells,of
R135 T227 T228 nsubj BRCA2,was
R1350 T2247 T2230 cc and,enhances
R1351 T2248 T2230 conj blocks,enhances
R1352 T2249 T2250 preconj both,delay
R1353 T2250 T2248 dobj delay,blocks
R1354 T2251 T2250 det the,delay
R1355 T2252 T2253 compound G2,M
R1356 T2253 T2250 compound M,delay
R1357 T2254 T2253 punct /,M
R1358 T2255 T2250 acl associated,delay
R1359 T2256 T2255 prep with,associated
R136 T229 T230 det the,gene
R1360 T2257 T2256 pobj damage,with
R1361 T2258 T2250 cc and,delay
R1362 T2259 T2260 det the,ability
R1363 T2260 T2250 conj ability,delay
R1364 T2261 T2260 prep of,ability
R1365 T2262 T2263 det the,cells
R1366 T2263 T2261 pobj cells,of
R1367 T2264 T2263 amod transfected,cells
R1368 T2265 T2266 aux to,assembly
R1369 T2266 T2260 acl assembly,ability
R137 T230 T228 attr gene,was
R1370 T2267 T2268 amod subnuclear,foci
R1371 T2268 T2266 dobj foci,assembly
R1372 T2269 T2268 compound RAD51,foci
R1373 T2270 T2228 punct .,showed
R1374 T2272 T2273 prep In,provide
R1375 T2274 T2275 det the,paper
R1376 T2275 T2272 pobj paper,In
R1377 T2276 T2275 prep by,paper
R1378 T2277 T2276 pobj Davies,by
R1379 T2278 T2279 advmod et,al
R138 T231 T230 amod second,gene
R1380 T2279 T2277 advmod al,Davies
R1381 T2280 T2273 punct ", ",provide
R1382 T2281 T2273 nsubj data,provide
R1383 T2282 T2273 dobj evidence,provide
R1384 T2283 T2282 prep for,evidence
R1385 T2284 T2285 det a,mechanism
R1386 T2285 T2283 pobj mechanism,for
R1387 T2286 T2285 amod plausible,mechanism
R1388 T2287 T2285 prep of,mechanism
R1389 T2288 T2289 det the,effect
R139 T232 T233 compound breast,cancer
R1390 T2289 T2287 pobj effect,of
R1391 T2290 T2289 amod dominant,effect
R1392 T2291 T2289 amod negative,effect
R1393 T2292 T2289 acl associated,effect
R1394 T2293 T2292 prep with,associated
R1395 T2294 T2293 pobj expression,with
R1396 T2295 T2294 prep of,expression
R1397 T2296 T2297 det a,repeat
R1398 T2297 T2295 pobj repeat,of
R1399 T2298 T2297 amod single,repeat
R14 T52 T50 pobj role,to
R140 T233 T234 compound cancer,susceptibility
R1400 T2299 T2297 compound BRC,repeat
R1401 T2300 T2273 punct .,provide
R1402 T2302 T2303 compound DNA,assays
R1403 T2303 T2305 nsubjpass assays,used
R1404 T2304 T2303 compound binding,assays
R1405 T2306 T2303 cc and,assays
R1406 T2307 T2308 compound electron,microscopy
R1407 T2308 T2309 compound microscopy,methods
R1408 T2309 T2303 conj methods,assays
R1409 T2310 T2305 auxpass were,used
R141 T234 T230 compound susceptibility,gene
R1410 T2311 T2312 aux to,show
R1411 T2312 T2305 advcl show,used
R1412 T2313 T2314 mark that,interferes
R1413 T2314 T2312 ccomp interferes,show
R1414 T2315 T2316 det a,peptide
R1415 T2316 T2314 nsubj peptide,interferes
R1416 T2317 T2316 compound BRC3,peptide
R1417 T2318 T2314 prep with,interferes
R1418 T2319 T2320 det the,ability
R1419 T2320 T2318 pobj ability,with
R142 T235 T236 aux to,discovered
R1420 T2321 T2320 prep of,ability
R1421 T2322 T2321 pobj RAD51,of
R1422 T2323 T2324 aux to,assemble
R1423 T2324 T2320 acl assemble,ability
R1424 T2325 T2324 prep into,assemble
R1425 T2326 T2327 amod oligomeric,filaments
R1426 T2327 T2325 pobj filaments,into
R1427 T2328 T2324 prep on,assemble
R1428 T2329 T2328 pobj DNA,on
R1429 T2330 T2305 punct .,used
R143 T236 T230 advcl discovered,gene
R1430 T2332 T2333 det A,peptide
R1431 T2333 T2335 nsubjpass peptide,reported
R1432 T2334 T2333 compound BRC4,peptide
R1433 T2336 T2335 auxpass was,reported
R1434 T2337 T2335 advmod also,reported
R1435 T2338 T2339 aux to,inhibit
R1436 T2339 T2335 xcomp inhibit,reported
R1437 T2340 T2341 det the,interaction
R1438 T2341 T2339 dobj interaction,inhibit
R1439 T2342 T2343 compound RAD51,DNA
R144 T237 T236 auxpass be,discovered
R1440 T2343 T2341 compound DNA,interaction
R1441 T2344 T2343 punct –,DNA
R1442 T2345 T2335 punct .,reported
R1443 T2347 T2348 det These,experiments
R1444 T2348 T2349 nsubj experiments,raise
R1445 T2350 T2351 det the,possibility
R1446 T2351 T2349 dobj possibility,raise
R1447 T2352 T2353 mark that,act
R1448 T2353 T2351 acl act,possibility
R1449 T2354 T2355 det the,protein
R145 T238 T228 punct ", ",was
R1450 T2355 T2353 nsubj protein,act
R1451 T2356 T2357 amod full,length
R1452 T2357 T2355 compound length,protein
R1453 T2358 T2357 punct -,length
R1454 T2359 T2355 compound BRCA2,protein
R1455 T2360 T2353 aux could,act
R1456 T2361 T2353 prep as,act
R1457 T2362 T2363 det a,regulator
R1458 T2363 T2361 pobj regulator,as
R1459 T2364 T2363 amod negative,regulator
R146 T239 T228 cc and,was
R1460 T2365 T2363 prep of,regulator
R1461 T2366 T2367 amod inappropriate,interaction
R1462 T2367 T2365 pobj interaction,of
R1463 T2368 T2369 compound RAD51,DNA
R1464 T2369 T2367 compound DNA,interaction
R1465 T2370 T2369 punct –,DNA
R1466 T2371 T2349 punct .,raise
R1467 T2373 T2374 det The,experiment
R1468 T2374 T2376 nsubj experiment,is
R1469 T2375 T2374 amod final,experiment
R147 T240 T241 auxpass was,isolated
R1470 T2377 T2374 acl reported,experiment
R1471 T2378 T2377 agent by,reported
R1472 T2379 T2378 pobj Davies,by
R1473 T2380 T2381 advmod et,al
R1474 T2381 T2379 advmod al,Davies
R1475 T2382 T2383 punct [,26
R1476 T2383 T2379 parataxis 26,Davies
R1477 T2384 T2383 punct ],26
R1478 T2385 T2386 advmod particularly,important
R1479 T2386 T2376 acomp important,is
R148 T241 T228 conj isolated,was
R1480 T2387 T2386 prep with,important
R1481 T2388 T2387 pobj respect,with
R1482 T2389 T2388 prep to,respect
R1483 T2390 T2389 pcomp understanding,to
R1484 T2391 T2392 det the,s
R1485 T2392 T2390 dobj s,understanding
R1486 T2393 T2392 nmod mechanism,s
R1487 T2394 T2392 punct (,s
R1488 T2395 T2392 punct ),s
R1489 T2396 T2397 prep through,promotes
R149 T242 T241 prep through,isolated
R1490 T2397 T2392 relcl promotes,s
R1491 T2398 T2396 pobj which,through
R1492 T2399 T2397 nsubj BRCA2,promotes
R1493 T2400 T2401 npadvmod RAD51,dependent
R1494 T2401 T2403 amod dependent,recombination
R1495 T2402 T2401 punct -,dependent
R1496 T2403 T2397 dobj recombination,promotes
R1497 T2404 T2376 punct .,is
R1498 T2406 T2407 det The,localization
R1499 T2407 T2408 nsubjpass localization,examined
R15 T53 T52 prep of,role
R150 T243 T244 amod positional,cloning
R1500 T2409 T2407 prep of,localization
R1501 T2410 T2409 pobj RAD51,of
R1502 T2411 T2408 auxpass was,examined
R1503 T2412 T2408 prep in,examined
R1504 T2413 T2414 nmod CAPAN,cells
R1505 T2414 T2412 pobj cells,in
R1506 T2415 T2413 punct -,CAPAN
R1507 T2416 T2413 nummod 1,CAPAN
R1508 T2417 T2414 punct ", ",cells
R1509 T2418 T2419 det the,line
R151 T244 T242 pobj cloning,through
R1510 T2419 T2414 appos line,cells
R1511 T2420 T2419 amod same,line
R1512 T2421 T2422 amod human,tumor
R1513 T2422 T2419 compound tumor,line
R1514 T2423 T2419 acl examined,line
R1515 T2424 T2423 agent by,examined
R1516 T2425 T2424 pobj Moynahan,by
R1517 T2426 T2427 advmod et,al
R1518 T2427 T2425 advmod al,Moynahan
R1519 T2428 T2429 punct [,24
R152 T245 T241 advcl using,isolated
R1520 T2429 T2425 parataxis 24,Moynahan
R1521 T2430 T2429 punct ],24
R1522 T2431 T2408 punct .,examined
R1523 T2433 T2434 nsubjpass It,shown
R1524 T2435 T2434 aux had,shown
R1525 T2436 T2434 auxpass been,shown
R1526 T2437 T2434 advmod previously,shown
R1527 T2438 T2439 mark that,mislocalized
R1528 T2439 T2434 ccomp mislocalized,shown
R1529 T2440 T2441 det the,amount
R153 T246 T245 dobj data,using
R1530 T2441 T2439 nsubjpass amount,mislocalized
R1531 T2442 T2441 amod small,amount
R1532 T2443 T2441 prep of,amount
R1533 T2444 T2445 amod truncated,protein
R1534 T2445 T2443 pobj protein,of
R1535 T2446 T2445 compound BRCA2,protein
R1536 T2447 T2441 acl expressed,amount
R1537 T2448 T2447 prep by,expressed
R1538 T2449 T2450 nmod CAPAN,cells
R1539 T2450 T2448 pobj cells,by
R154 T247 T246 prep from,data
R1540 T2451 T2449 punct -,CAPAN
R1541 T2452 T2449 nummod 1,CAPAN
R1542 T2453 T2439 auxpass was,mislocalized
R1543 T2454 T2439 prep to,mislocalized
R1544 T2455 T2456 det the,cytoplasm
R1545 T2456 T2454 pobj cytoplasm,to
R1546 T2457 T2439 punct ", ",mislocalized
R1547 T2458 T2439 advcl consistent,mislocalized
R1548 T2459 T2458 prep with,consistent
R1549 T2460 T2461 det the,fact
R155 T248 T247 pobj families,from
R1550 T2461 T2459 pobj fact,with
R1551 T2462 T2463 mark that,lacks
R1552 T2463 T2461 acl lacks,fact
R1553 T2464 T2465 det the,protein
R1554 T2465 T2463 nsubj protein,lacks
R1555 T2466 T2465 compound truncation,protein
R1556 T2467 T2468 det a,signal
R1557 T2468 T2463 dobj signal,lacks
R1558 T2469 T2468 amod nuclear,signal
R1559 T2470 T2468 compound localization,signal
R156 T249 T248 prep with,families
R1560 T2471 T2472 punct [,28
R1561 T2472 T2434 parataxis 28,shown
R1562 T2473 T2472 punct ],28
R1563 T2474 T2434 punct .,shown
R1564 T2476 T2477 nsubj Davies,showed
R1565 T2478 T2479 advmod et,al
R1566 T2479 T2476 advmod al,Davies
R1567 T2480 T2481 nmod CAPAN,cells
R1568 T2481 T2484 nsubj cells,be
R1569 T2482 T2480 punct -,CAPAN
R157 T250 T251 amod inherited,cancer
R1570 T2483 T2480 nummod 1,CAPAN
R1571 T2484 T2477 ccomp be,showed
R1572 T2485 T2484 aux to,be
R1573 T2486 T2484 acomp defective,be
R1574 T2487 T2484 prep in,be
R1575 T2488 T2489 amod nuclear,localization
R1576 T2489 T2487 pobj localization,in
R1577 T2490 T2489 prep of,localization
R1578 T2491 T2490 pobj RAD51,of
R1579 T2492 T2477 punct ", ",showed
R158 T251 T249 pobj cancer,with
R1580 T2493 T2477 advcl raising,showed
R1581 T2494 T2495 det the,possibility
R1582 T2495 T2493 dobj possibility,raising
R1583 T2496 T2497 mark that,carried
R1584 T2497 T2495 acl carried,possibility
R1585 T2498 T2497 nsubjpass RAD51,carried
R1586 T2499 T2497 auxpass is,carried
R1587 T2500 T2497 advmod normally,carried
R1588 T2501 T2497 prep to,carried
R1589 T2502 T2503 det the,nucleus
R159 T252 T251 compound breast,cancer
R1590 T2503 T2501 pobj nucleus,to
R1591 T2504 T2497 prep by,carried
R1592 T2505 T2504 pcomp binding,by
R1593 T2506 T2505 dobj BRCA2,binding
R1594 T2507 T2477 punct .,showed
R1595 T2509 T2510 nsubj It,is
R1596 T2511 T2510 acomp possible,is
R1597 T2512 T2513 mark that,be
R1598 T2513 T2510 ccomp be,is
R1599 T2514 T2513 nsubj RAD51,be
R16 T54 T55 det the,gene
R160 T253 T254 punct [,4
R1600 T2515 T2513 aux may,be
R1601 T2516 T2513 advmod alternatively,be
R1602 T2517 T2513 acomp capable,be
R1603 T2518 T2517 prep of,capable
R1604 T2519 T2520 npadvmod BRCA2,independent
R1605 T2520 T2522 amod independent,transport
R1606 T2521 T2520 punct -,independent
R1607 T2522 T2518 pobj transport,of
R1608 T2523 T2510 punct ", ",is
R1609 T2524 T2510 cc but,is
R161 T254 T241 parataxis 4,isolated
R1610 T2525 T2526 nsubj mislocalization,sequester
R1611 T2526 T2510 conj sequester,is
R1612 T2527 T2525 prep of,mislocalization
R1613 T2528 T2527 pobj BRCA2,of
R1614 T2529 T2525 prep to,mislocalization
R1615 T2530 T2531 det the,cytoplasm
R1616 T2531 T2529 pobj cytoplasm,to
R1617 T2532 T2526 aux may,sequester
R1618 T2533 T2526 dobj RAD51,sequester
R1619 T2534 T2526 cc and,sequester
R162 T255 T254 punct ],4
R1620 T2535 T2526 conj block,sequester
R1621 T2536 T2537 poss its,mode
R1622 T2537 T2535 dobj mode,block
R1623 T2538 T2537 amod normal,mode
R1624 T2539 T2537 prep of,mode
R1625 T2540 T2539 pobj transport,of
R1626 T2541 T2526 punct .,sequester
R1627 T2543 T2544 nsubj Support,requires
R1628 T2545 T2543 prep for,Support
R1629 T2546 T2547 det the,hypothesis
R163 T256 T228 punct .,was
R1630 T2547 T2545 pobj hypothesis,for
R1631 T2548 T2549 mark that,is
R1632 T2549 T2547 acl is,hypothesis
R1633 T2550 T2551 det the,mislocalization
R1634 T2551 T2549 nsubj mislocalization,is
R1635 T2552 T2551 amod observed,mislocalization
R1636 T2553 T2551 prep of,mislocalization
R1637 T2554 T2553 pobj RAD51,of
R1638 T2555 T2556 det an,consequence
R1639 T2556 T2549 attr consequence,is
R164 T258 T259 nsubj Cells,are
R1640 T2557 T2556 amod indirect,consequence
R1641 T2558 T2556 prep of,consequence
R1642 T2559 T2560 det the,defect
R1643 T2560 T2558 pobj defect,of
R1644 T2561 T2560 compound BRCA2,defect
R1645 T2562 T2544 dobj reintroduction,requires
R1646 T2563 T2562 prep of,reintroduction
R1647 T2564 T2565 amod functional,BRCA2
R1648 T2565 T2563 pobj BRCA2,of
R1649 T2566 T2562 prep into,reintroduction
R165 T260 T258 prep with,Cells
R1650 T2567 T2566 pobj CAPAN,into
R1651 T2568 T2567 punct -,CAPAN
R1652 T2569 T2567 nummod 1,CAPAN
R1653 T2570 T2544 punct .,requires
R1654 T2572 T2573 prep Given,seems
R1655 T2574 T2575 det the,nature
R1656 T2575 T2572 pobj nature,Given
R1657 T2576 T2575 amod elaborate,nature
R1658 T2577 T2575 prep of,nature
R1659 T2578 T2579 det the,interaction
R166 T261 T262 amod mutant,protein
R1660 T2579 T2577 pobj interaction,of
R1661 T2580 T2581 compound RAD51,BRCA2
R1662 T2581 T2579 compound BRCA2,interaction
R1663 T2582 T2581 punct –,BRCA2
R1664 T2583 T2573 punct ", ",seems
R1665 T2584 T2573 nsubj it,seems
R1666 T2585 T2586 advmod somewhat,unlikely
R1667 T2586 T2573 oprd unlikely,seems
R1668 T2587 T2588 mark that,is
R1669 T2588 T2573 ccomp is,seems
R167 T262 T260 pobj protein,with
R1670 T2589 T2590 det the,role
R1671 T2590 T2588 nsubj role,is
R1672 T2591 T2590 amod only,role
R1673 T2592 T2590 prep of,role
R1674 T2593 T2592 pobj BRCA2,of
R1675 T2594 T2590 prep in,role
R1676 T2595 T2594 pcomp promoting,in
R1677 T2596 T2595 dobj recombination,promoting
R1678 T2597 T2598 aux to,serve
R1679 T2598 T2588 xcomp serve,is
R168 T263 T262 compound BRCA2,protein
R1680 T2599 T2598 prep as,serve
R1681 T2600 T2601 det a,transporter
R1682 T2601 T2599 pobj transporter,as
R1683 T2602 T2601 amod specific,transporter
R1684 T2603 T2601 amod nuclear,transporter
R1685 T2604 T2601 prep of,transporter
R1686 T2605 T2604 pobj RAD51,of
R1687 T2606 T2573 punct .,seems
R1688 T2608 T2609 det An,alternative
R1689 T2609 T2611 nsubj alternative,is
R169 T264 T259 punct ", ",are
R1690 T2610 T2609 amod attractive,alternative
R1691 T2612 T2609 punct ", ",alternative
R1692 T2613 T2609 acl favored,alternative
R1693 T2614 T2613 agent by,favored
R1694 T2615 T2614 pobj Davies,by
R1695 T2616 T2617 advmod et,al
R1696 T2617 T2615 advmod al,Davies
R1697 T2618 T2619 punct [,26
R1698 T2619 T2615 parataxis 26,Davies
R1699 T2620 T2619 punct ],26
R17 T55 T53 pobj gene,of
R170 T265 T259 prep like,are
R1700 T2621 T2611 punct ", ",is
R1701 T2622 T2623 mark that,required
R1702 T2623 T2611 ccomp required,is
R1703 T2624 T2625 det the,association
R1704 T2625 T2623 nsubjpass association,required
R1705 T2626 T2625 prep of,association
R1706 T2627 T2628 compound RAD51,BRCA2
R1707 T2628 T2626 pobj BRCA2,of
R1708 T2629 T2628 punct –,BRCA2
R1709 T2630 T2623 auxpass is,required
R171 T266 T267 amod many,cells
R1710 T2631 T2632 aux to,maintain
R1711 T2632 T2623 advcl maintain,required
R1712 T2633 T2632 dobj RAD51,maintain
R1713 T2634 T2632 prep in,maintain
R1714 T2635 T2636 det a,form
R1715 T2636 T2634 pobj form,in
R1716 T2637 T2638 dep that,is
R1717 T2638 T2636 relcl is,form
R1718 T2639 T2638 prep in,is
R1719 T2640 T2641 det a,state
R172 T267 T265 pobj cells,like
R1720 T2641 T2639 pobj state,in
R1721 T2642 T2641 prep of,state
R1722 T2643 T2642 punct ',of
R1723 T2644 T2642 pobj readiness,of
R1724 T2645 T2611 punct ',is
R1725 T2646 T2647 punct (,2a
R1726 T2647 T2611 parataxis 2a,is
R1727 T2648 T2647 compound Fig.,2a
R1728 T2649 T2647 punct ),2a
R1729 T2650 T2611 punct .,is
R173 T268 T267 compound cancer,cells
R1730 T2652 T2653 prep In,exist
R1731 T2654 T2655 det the,absence
R1732 T2655 T2652 pobj absence,In
R1733 T2656 T2655 prep of,absence
R1734 T2657 T2658 det this,interaction
R1735 T2658 T2656 pobj interaction,of
R1736 T2659 T2658 prep with,interaction
R1737 T2660 T2659 pobj BRCA2,with
R1738 T2661 T2653 punct ", ",exist
R1739 T2662 T2653 nsubj RAD51,exist
R174 T269 T259 punct ", ",are
R1740 T2663 T2653 aux might,exist
R1741 T2664 T2653 prep in,exist
R1742 T2665 T2666 det a,form
R1743 T2666 T2664 pobj form,in
R1744 T2667 T2668 dep that,is
R1745 T2668 T2666 relcl is,form
R1746 T2669 T2668 neg not,is
R1747 T2670 T2668 acomp capable,is
R1748 T2671 T2670 prep of,capable
R1749 T2672 T2673 auxpass being,recruited
R175 T270 T271 advmod genetically,unstable
R1750 T2673 T2671 pcomp recruited,of
R1751 T2674 T2673 prep into,recruited
R1752 T2675 T2676 det a,complex
R1753 T2676 T2674 pobj complex,into
R1754 T2677 T2676 amod functional,complex
R1755 T2678 T2676 compound repair,complex
R1756 T2679 T2680 advmod when,occurs
R1757 T2680 T2673 advcl occurs,recruited
R1758 T2681 T2680 nsubj damage,occurs
R1759 T2682 T2653 punct .,exist
R176 T271 T259 acomp unstable,are
R1760 T2684 T2685 prep For,indicated
R1761 T2686 T2684 pobj example,For
R1762 T2687 T2685 punct ", ",indicated
R1763 T2688 T2689 amod previous,studies
R1764 T2689 T2685 nsubj studies,indicated
R1765 T2690 T2691 mark that,shows
R1766 T2691 T2685 ccomp shows,indicated
R1767 T2692 T2691 nsubj RAD51,shows
R1768 T2693 T2694 amod little,preference
R1769 T2694 T2691 dobj preference,shows
R177 T272 T259 cc and,are
R1770 T2695 T2694 compound binding,preference
R1771 T2696 T2694 prep for,preference
R1772 T2697 T2698 amod single,strand
R1773 T2698 T2700 compound strand,DNA
R1774 T2699 T2698 punct -,strand
R1775 T2700 T2696 pobj DNA,for
R1776 T2701 T2700 punct (,DNA
R1777 T2702 T2700 appos ssDNA,DNA
R1778 T2703 T2694 punct ),preference
R1779 T2704 T2694 prep over,preference
R178 T273 T259 conj accumulate,are
R1780 T2705 T2706 amod double,strand
R1781 T2706 T2708 compound strand,DNA
R1782 T2707 T2706 punct -,strand
R1783 T2708 T2704 pobj DNA,over
R1784 T2709 T2708 punct (,DNA
R1785 T2710 T2708 appos dsDNA,DNA
R1786 T2711 T2685 punct ),indicated
R1787 T2712 T2713 punct [,29
R1788 T2713 T2685 parataxis 29,indicated
R1789 T2714 T2713 nummod 3,29
R179 T274 T275 amod gross,rearrangements
R1790 T2715 T2713 punct ",",29
R1791 T2716 T2713 punct ],29
R1792 T2717 T2685 punct .,indicated
R1793 T2719 T2720 det This,result
R1794 T2720 T2721 nsubj result,mean
R1795 T2722 T2721 aux could,mean
R1796 T2723 T2724 mark that,required
R1797 T2724 T2721 ccomp required,mean
R1798 T2725 T2726 amod regulatory,factors
R1799 T2726 T2724 nsubjpass factors,required
R18 T56 T57 compound breast,cancer
R180 T275 T273 dobj rearrangements,accumulate
R1800 T2727 T2726 punct ", ",factors
R1801 T2728 T2729 amod such,as
R1802 T2729 T2726 prep as,factors
R1803 T2730 T2729 pobj BRCA2,as
R1804 T2731 T2724 punct ", ",required
R1805 T2732 T2724 auxpass are,required
R1806 T2733 T2734 aux to,suppress
R1807 T2734 T2724 advcl suppress,required
R1808 T2735 T2736 compound RAD51,dsDNA
R1809 T2736 T2738 compound dsDNA,interactions
R181 T276 T275 amod chromosomal,rearrangements
R1810 T2737 T2736 punct –,dsDNA
R1811 T2738 T2734 dobj interactions,suppress
R1812 T2740 T2724 advcl prevent,required
R1813 T2741 T2740 dobj sequestration,prevent
R1814 T2742 T2741 prep of,sequestration
R1815 T2743 T2742 pobj RAD51,of
R1816 T2744 T2741 prep in,sequestration
R1817 T2745 T2746 det a,form
R1818 T2746 T2744 pobj form,in
R1819 T2747 T2746 amod nonfunctional,form
R182 T277 T278 punct [,6
R1820 T2748 T2721 punct .,mean
R1821 T2750 T2751 advmod Alternatively,in
R1822 T2751 T2754 prep in,be
R1823 T2752 T2751 punct ", ",in
R1824 T2739 T2740 aux to,prevent
R1825 T2755 T2751 pobj addition,in
R1826 T2756 T2754 punct ", ",be
R1827 T2753 T2751 cc or,in
R1828 T2758 T2757 prep of,suppression
R1829 T2759 T2760 compound RAD51,ssDNA
R183 T278 T273 parataxis 6,accumulate
R1830 T2757 T2754 nsubj suppression,be
R1831 T2761 T2760 punct –,ssDNA
R1832 T2762 T2758 pobj interaction,of
R1833 T2760 T2762 compound ssDNA,interaction
R1834 T2764 T2754 acomp important,be
R1835 T2765 T2754 prep for,be
R1836 T2763 T2754 aux might,be
R1837 T2767 T2766 dobj RAD51,preventing
R1838 T2768 T2766 prep from,preventing
R1839 T2766 T2765 pcomp preventing,for
R184 T279 T278 nummod 5,6
R1840 T2770 T2769 prep to,binding
R1841 T2771 T2772 det the,regions
R1842 T2769 T2768 pcomp binding,from
R1843 T2773 T2772 prep of,regions
R1844 T2774 T2773 pobj ssDNA,of
R1845 T2772 T2770 pobj regions,to
R1846 T2776 T2772 relcl form,regions
R1847 T2777 T2776 prep during,form
R1848 T2775 T2776 dep that,form
R1849 T2779 T2777 pobj replication,during
R185 T280 T278 punct ",",6
R1850 T2780 T2779 compound DNA,replication
R1851 T2781 T2754 punct .,be
R1852 T2778 T2779 amod normal,replication
R1853 T2783 T2784 nsubj BRCA2,promote
R1854 T2785 T2784 aux may,promote
R1855 T2786 T2784 advmod thus,promote
R1856 T2788 T2784 dobj assembly,promote
R1857 T2789 T2788 prep into,assembly
R1858 T2787 T2788 compound RAD51,assembly
R1859 T2791 T2789 pobj complexes,into
R186 T281 T278 punct ],6
R1860 T2792 T2791 compound repair,complexes
R1861 T2790 T2791 amod recombinational,complexes
R1862 T2794 T2795 det a,mechanism
R1863 T2795 T2793 pobj mechanism,via
R1864 T2796 T2795 amod negative,mechanism
R1865 T2793 T2784 prep via,promote
R1866 T2798 T2793 punct (,via
R1867 T2799 T2800 advmod i.e.,by
R1868 T2797 T2795 amod regulatory,mechanism
R1869 T2801 T2800 pcomp blocking,by
R187 T282 T259 punct .,are
R1870 T2802 T2803 compound RAD51–BRCA2,interaction
R1871 T2800 T2793 prep by,via
R1872 T2804 T2805 mark until,occurred
R1873 T2805 T2801 advcl occurred,blocking
R1874 T2803 T2801 dobj interaction,blocking
R1875 T2807 T2805 aux has,occurred
R1876 T2808 T2805 cc and,occurred
R1877 T2806 T2805 nsubj damage,occurred
R1878 T2810 T2805 conj are,occurred
R1879 T2811 T2809 acl required,factors
R188 T284 T285 det The,sequence
R1880 T2809 T2810 nsubj factors,are
R1881 T2813 T2812 punct ',for
R1882 T2812 T2811 prep for,required
R1883 T2815 T2812 pobj assembly,for
R1884 T2814 T2815 amod productive,assembly
R1885 T2817 T2815 prep of,assembly
R1886 T2816 T2815 punct ',assembly
R1887 T2819 T2815 prep at,assembly
R1888 T2818 T2817 pobj RAD51,of
R1889 T2821 T2819 pobj sites,at
R189 T285 T286 nsubj sequence,offers
R1890 T2822 T2810 prep in,are
R1891 T2820 T2821 amod damaged,sites
R1892 T2824 T2784 punct ),promote
R1893 T2825 T2784 punct .,promote
R1894 T2823 T2822 pobj place,in
R1895 T2827 T2828 mark As,mentioned
R1896 T2828 T2829 advcl mentioned,reflect
R1897 T2830 T2828 advmod previously,mentioned
R1898 T2831 T2829 punct ", ",reflect
R1899 T2833 T2829 nsubj ability,reflect
R19 T57 T58 compound cancer,susceptibility
R190 T287 T285 prep of,sequence
R1900 T2832 T2833 det the,ability
R1901 T2835 T2836 det a,peptide
R1902 T2836 T2834 pobj peptide,of
R1903 T2834 T2833 prep of,ability
R1904 T2838 T2839 aux to,repress
R1905 T2839 T2833 acl repress,ability
R1906 T2837 T2836 compound BRC,peptide
R1907 T2841 T2839 dobj interaction,repress
R1908 T2842 T2841 compound RAD51,interaction
R1909 T2840 T2841 det the,interaction
R191 T288 T289 det this,protein
R1910 T2844 T2841 compound BRCA2,interaction
R1911 T2843 T2841 punct –,interaction
R1912 T2846 T2847 det a,role
R1913 T2847 T2829 dobj role,reflect
R1914 T2845 T2829 aux could,reflect
R1915 T2849 T2850 amod full,length
R1916 T2850 T2852 compound length,protein
R1917 T2851 T2850 punct -,length
R1918 T2848 T2847 prep of,role
R1919 T2853 T2847 prep in,role
R192 T289 T287 pobj protein,of
R1920 T2852 T2848 pobj protein,of
R1921 T2855 T2856 amod unwanted,interactions
R1922 T2854 T2853 pcomp suppressing,in
R1923 T2857 T2858 compound RAD51,BRCA2
R1924 T2858 T2856 compound BRCA2,interactions
R1925 T2856 T2854 dobj interactions,suppressing
R1926 T2860 T2829 punct .,reflect
R1927 T2862 T2863 advmod Yet,role
R1928 T2859 T2858 punct –,BRCA2
R1929 T2864 T2863 det another,role
R193 T290 T289 amod large,protein
R1930 T2867 T2863 prep for,role
R1931 T2863 T2866 nsubj role,is
R1932 T2865 T2863 amod potential,role
R1933 T2869 T2863 prep in,role
R1934 T2870 T2869 pcomp promoting,in
R1935 T2868 T2867 pobj BRCA2,for
R1936 T2872 T2874 amod dependent,repair
R1937 T2873 T2872 punct -,dependent
R1938 T2871 T2872 npadvmod RAD51,dependent
R1939 T2875 T2874 amod recombinational,repair
R194 T291 T285 punct (,sequence
R1940 T2876 T2877 det a,role
R1941 T2874 T2870 dobj repair,promoting
R1942 T2878 T2877 amod positive,role
R1943 T2877 T2866 attr role,is
R1944 T2880 T2879 pobj assembly,in
R1945 T2881 T2880 prep of,assembly
R1946 T2879 T2877 prep in,role
R1947 T2883 T2880 prep at,assembly
R1948 T2884 T2885 amod damaged,sites
R1949 T2882 T2881 pobj RAD51,of
R195 T292 T293 nummod 3418,acids
R1950 T2886 T2887 punct (,2b
R1951 T2885 T2883 pobj sites,at
R1952 T2888 T2887 compound Fig.,2b
R1953 T2889 T2887 punct ),2b
R1954 T2887 T2866 parataxis 2b,is
R1955 T2892 T2893 amod Several,proteins
R1956 T2890 T2866 punct .,is
R1957 T2895 T2896 dep that,interact
R1958 T2893 T2894 nsubjpass proteins,thought
R1959 T2897 T2896 prep with,interact
R196 T293 T285 appos acids,sequence
R1960 T2898 T2897 pobj RAD51,with
R1961 T2896 T2893 relcl interact,proteins
R1962 T2900 T2901 aux to,mediate
R1963 T2901 T2894 xcomp mediate,thought
R1964 T2899 T2894 auxpass are,thought
R1965 T2903 T2901 punct ',mediate
R1966 T2904 T2901 dobj assembly,mediate
R1967 T2902 T2901 punct ',mediate
R1968 T2906 T2905 pobj RAD51,of
R1969 T2907 T2901 prep at,mediate
R197 T294 T293 compound amino,acids
R1970 T2905 T2904 prep of,assembly
R1971 T2909 T2908 prep of,sites
R1972 T2910 T2911 compound DNA,damage
R1973 T2908 T2907 pobj sites,at
R1974 T2912 T2913 punct (,reviewed
R1975 T2913 T2894 parataxis reviewed,thought
R1976 T2911 T2909 pobj damage,of
R1977 T2914 T2913 prep in,reviewed
R1978 T2916 T2914 pobj 30,in
R1979 T2917 T2913 punct ],reviewed
R198 T295 T286 punct ),offers
R1980 T2915 T2914 punct [,in
R1981 T2919 T2894 punct .,thought
R1982 T2918 T2913 punct ),reviewed
R1983 T2921 T2922 compound RAD51,paralogs
R1984 T2924 T2922 prep in,paralogs
R1985 T2922 T2923 nsubj paralogs,function
R1986 T2926 T2922 punct ", ",paralogs
R1987 T2925 T2924 amod particular,in
R1988 T2928 T2927 pobj XRCC2,including
R1989 T2929 T2928 punct ", ",XRCC2
R199 T296 T297 advmod very,clue
R1990 T2927 T2922 prep including,paralogs
R1991 T2931 T2930 punct ", ",XRCC3
R1992 T2932 T2930 conj RAD51B,XRCC3
R1993 T2930 T2928 conj XRCC3,XRCC2
R1994 T2934 T2932 conj RAD51C,RAD51B
R1995 T2935 T2934 cc and,RAD51C
R1996 T2933 T2932 punct ", ",RAD51B
R1997 T2937 T2923 punct ", ",function
R1998 T2938 T2923 aux may,function
R1999 T2936 T2934 conj RAD51D,RAD51C
R20 T58 T55 compound susceptibility,gene
R200 T297 T286 dobj clue,offers
R2000 T2940 T2941 det a,complex
R2001 T2941 T2939 pobj complex,as
R2002 T2939 T2923 prep as,function
R2003 T2943 T2941 relcl promotes,complex
R2004 T2944 T2943 advmod actively,promotes
R2005 T2942 T2943 dep that,promotes
R2006 T2946 T2943 dobj assembly,promotes
R2007 T2947 T2948 punct [,31
R2008 T2945 T2946 compound RAD51,assembly
R2009 T2949 T2948 punct ],31
R201 T298 T297 amod little,clue
R2010 T2950 T2923 punct .,function
R2011 T2948 T2923 parataxis 31,function
R2012 T2952 T2953 nsubj BRCA2,cooperate
R2013 T2954 T2953 aux could,cooperate
R2014 T2956 T2957 compound RAD51,paralogs
R2015 T2957 T2955 pobj paralogs,with
R2016 T2955 T2953 prep with,cooperate
R2017 T2959 T2958 pcomp promoting,in
R2018 T2960 T2961 compound RAD51,assembly
R2019 T2958 T2953 prep in,cooperate
R202 T299 T297 prep to,clue
R2020 T2962 T2953 punct ", ",cooperate
R2021 T2963 T2953 cc or,cooperate
R2022 T2961 T2959 dobj assembly,promoting
R2023 T2965 T2953 conj provide,cooperate
R2024 T2966 T2967 det an,pathway
R2025 T2964 T2965 advmod even,provide
R2026 T2968 T2967 amod alternative,pathway
R2027 T2969 T2967 compound assembly,pathway
R2028 T2967 T2965 dobj pathway,provide
R2029 T2972 T2973 det The,observation
R203 T300 T301 poss its,function
R2030 T2970 T2953 punct .,cooperate
R2031 T2975 T2976 mark that,localizes
R2032 T2976 T2973 acl localizes,observation
R2033 T2973 T2974 nsubj observation,seems
R2034 T2978 T2976 prep to,localizes
R2035 T2979 T2980 npadvmod damage,induced
R2036 T2977 T2976 nsubj BRCA2,localizes
R2037 T2981 T2980 punct -,induced
R2038 T2980 T2982 amod induced,foci
R2039 T2983 T2982 amod subnuclear,foci
R204 T301 T299 pobj function,to
R2040 T2982 T2978 pobj foci,to
R2041 T2985 T2984 pobj RAD51,with
R2042 T2986 T2974 oprd consistent,seems
R2043 T2984 T2976 prep with,localizes
R2044 T2988 T2989 det the,possibility
R2045 T2987 T2986 prep with,consistent
R2046 T2990 T2991 mark that,plays
R2047 T2989 T2987 pobj possibility,with
R2048 T2992 T2991 nsubj BRCA2,plays
R2049 T2991 T2989 acl plays,possibility
R205 T302 T286 punct ", ",offers
R2050 T2994 T2991 dobj role,plays
R2051 T2995 T2994 amod positive,role
R2052 T2993 T2994 det a,role
R2053 T2997 T2996 pobj assembly,in
R2054 T2996 T2991 prep in,plays
R2055 T2999 T3000 det the,complex
R2056 T3000 T2998 pobj complex,of
R2057 T2998 T2997 prep of,assembly
R2058 T3002 T3003 punct [,11
R2059 T3001 T3000 compound recombination,complex
R206 T303 T304 mark although,are
R2060 T3004 T3003 punct ],11
R2061 T3003 T2974 parataxis 11,seems
R2062 T3007 T3008 advmod Finally,is
R2063 T3005 T2974 punct .,seems
R2064 T3009 T3008 punct ", ",is
R2065 T3011 T3008 acomp important,is
R2066 T3012 T3013 aux to,note
R2067 T3010 T3008 nsubj it,is
R2068 T3014 T3015 mark that,are
R2069 T3015 T3013 ccomp are,note
R207 T304 T286 advcl are,offers
R2070 T3013 T3008 xcomp note,is
R2071 T3017 T3015 nsubj models,are
R2072 T3018 T3017 nummod two,models
R2073 T3016 T3017 det the,models
R2074 T3020 T3021 det the,function
R2075 T3021 T3019 pobj function,for
R2076 T3022 T3021 prep of,function
R2077 T3019 T3017 prep for,models
R2078 T3024 T3022 pobj interaction,of
R2079 T3025 T3026 compound BRCA2,RAD51
R208 T305 T304 expl there,are
R2080 T3023 T3024 det the,interaction
R2081 T3026 T3024 compound RAD51,interaction
R2082 T3028 T3017 acl shown,models
R2083 T3029 T3028 prep in,shown
R2084 T3027 T3026 punct –,RAD51
R2085 T3031 T3030 nummod 2,Figure
R2086 T3030 T3029 pobj Figure,in
R2087 T3033 T3034 advmod mutually,exclusive
R2088 T3034 T3015 acomp exclusive,are
R2089 T3032 T3015 neg not,are
R209 T306 T307 nummod eight,segments
R2090 T3039 T3038 aux could,prevent
R2091 T3035 T3008 punct .,is
R2092 T3041 T3038 dobj assembly,prevent
R2093 T3037 T3038 nsubj BRCA2,prevent
R2094 T3042 T3041 compound RAD51,assembly
R2095 T3040 T3041 amod inappropriate,assembly
R2096 T3044 T3045 det the,absence
R2097 T3043 T3038 prep in,prevent
R2098 T3046 T3045 prep of,absence
R2099 T3045 T3043 pobj absence,in
R21 T59 T55 appos BRCA2,gene
R210 T307 T304 attr segments,are
R2100 T3048 T3038 cc and,prevent
R2101 T3049 T3038 conj promote,prevent
R2102 T3047 T3046 pobj damage,of
R2103 T3051 T3049 dobj assembly,promote
R2104 T3052 T3051 compound RAD51,assembly
R2105 T3050 T3051 amod functional,assembly
R2106 T3054 T3055 compound DNA,lesions
R2107 T3055 T3053 pobj lesions,at
R2108 T3053 T3051 prep at,assembly
R2109 T3057 T3058 det the,response
R211 T308 T307 amod repeated,segments
R2110 T3056 T3049 prep during,promote
R2111 T3059 T3058 compound damage,response
R2112 T3060 T3038 punct .,prevent
R2113 T3058 T3056 pobj response,during
R2114 T3062 T3063 amod Further,experiments
R2115 T3065 T3064 auxpass are,required
R2116 T3066 T3064 advmod clearly,required
R2117 T3063 T3064 nsubjpass experiments,required
R2118 T3068 T3064 advcl clarify,required
R2119 T3069 T3070 det the,interactions
R212 T309 T310 punct (,termed
R2120 T3067 T3068 aux to,clarify
R2121 T3071 T3070 amod functional,interactions
R2122 T3070 T3068 dobj interactions,clarify
R2123 T3073 T3072 pobj BRCA2,between
R2124 T3074 T3073 cc and,BRCA2
R2125 T3072 T3070 prep between,interactions
R2126 T3076 T3068 prep during,clarify
R2127 T3077 T3078 amod recombinational,repair
R2128 T3075 T3073 conj RAD51,BRCA2
R2129 T3079 T3064 punct .,required
R213 T310 T307 parataxis termed,segments
R2130 T3078 T3076 pobj repair,during
R2131 T3083 T3082 aux should,be
R2132 T3084 T3085 advmod relatively,straightforward
R2133 T3085 T3082 acomp straightforward,be
R2134 T3081 T3082 nsubj It,be
R2135 T3087 T3082 xcomp determine,be
R2136 T3089 T3087 ccomp limited,determine
R2137 T3086 T3087 aux to,determine
R2138 T3090 T3091 det the,role
R2139 T3088 T3089 mark whether,limited
R214 T311 T312 compound BRC,repeats
R2140 T3092 T3091 prep of,role
R2141 T3091 T3089 nsubjpass role,limited
R2142 T3094 T3089 auxpass is,limited
R2143 T3095 T3089 prep to,limited
R2144 T3093 T3092 pobj BRCA2,of
R2145 T3097 T3096 dobj RAD51,transporting
R2146 T3096 T3095 pcomp transporting,to
R2147 T3099 T3100 det the,nucleus
R2148 T3100 T3098 pobj nucleus,to
R2149 T3098 T3096 prep to,transporting
R215 T312 T310 oprd repeats,termed
R2150 T3103 T3104 mark If,were
R2151 T3101 T3082 punct .,be
R2152 T3105 T3104 nsubj this,were
R2153 T3108 T3104 attr case,were
R2154 T3104 T3106 advcl were,suppress
R2155 T3109 T3106 punct ", ",suppress
R2156 T3107 T3108 det the,case
R2157 T3111 T3110 prep of,addition
R2158 T3112 T3113 det a,signal
R2159 T3113 T3111 pobj signal,of
R216 T313 T310 punct ),termed
R2160 T3110 T3106 nsubj addition,suppress
R2161 T3115 T3113 compound localization,signal
R2162 T3116 T3110 prep to,addition
R2163 T3114 T3113 amod nuclear,signal
R2164 T3118 T3106 aux should,suppress
R2165 T3119 T3120 det the,phenotypes
R2166 T3117 T3116 pobj RAD51,to
R2167 T3121 T3122 npadvmod RAD51,mediated
R2168 T3122 T3120 amod mediated,phenotypes
R2169 T3120 T3106 dobj phenotypes,suppress
R217 T314 T307 prep in,segments
R2170 T3124 T3120 acl associated,phenotypes
R2171 T3125 T3124 prep with,associated
R2172 T3123 T3122 punct -,mediated
R2173 T3127 T3125 pobj mutation,with
R2174 T3128 T3127 compound BRCA2,mutation
R2175 T3126 T3127 det a,mutation
R2176 T3133 T3132 punct ", ",needed
R2177 T3129 T3106 punct .,suppress
R2178 T3131 T3132 advmod However,needed
R2179 T3135 T3132 nsubjpass experiments,needed
R218 T315 T316 det the,middle
R2180 T3136 T3132 auxpass are,needed
R2181 T3134 T3135 amod biochemical,experiments
R2182 T3138 T3132 advcl determine,needed
R2183 T3137 T3138 aux to,determine
R2184 T3140 T3138 ccomp blocks,determine
R2185 T3141 T3142 amod full,length
R2186 T3139 T3140 mark whether,blocks
R2187 T3143 T3142 punct -,length
R2188 T3144 T3140 nsubj BRCA2,blocks
R2189 T3142 T3144 compound length,BRCA2
R219 T316 T314 pobj middle,in
R2190 T3146 T3140 conj promotes,blocks
R2191 T3147 T3148 compound RAD51,BRCA2
R2192 T3145 T3140 cc or,blocks
R2193 T3149 T3148 punct –,BRCA2
R2194 T3148 T3150 compound BRCA2,interaction
R2195 T3151 T3132 punct .,needed
R2196 T3154 T3155 nsubj experiments,reveal
R2197 T3150 T3146 dobj interaction,promotes
R2198 T3153 T3154 amod Such,experiments
R2199 T3156 T3155 aux could,reveal
R22 T60 T52 prep in,role
R220 T317 T316 prep of,middle
R2200 T3158 T3159 amod additional,roles
R2201 T3159 T3155 dobj roles,reveal
R2202 T3157 T3155 advmod also,reveal
R2203 T3161 T3160 pobj BRCA2,for
R2204 T3162 T3159 prep in,roles
R2205 T3160 T3159 prep for,roles
R2206 T3164 T3162 pobj repair,in
R2207 T3163 T3164 amod recombinational,repair
R2208 T3169 T3168 punct ", ",promise
R2209 T3165 T3155 punct .,reveal
R221 T318 T319 det the,protein
R2210 T3167 T3168 advmod However,promise
R2211 T3171 T3168 nsubj obstacles,promise
R2212 T3172 T3171 amod technical,obstacles
R2213 T3170 T3171 amod several,obstacles
R2214 T3174 T3171 prep including,obstacles
R2215 T3175 T3176 det the,size
R2216 T3173 T3171 punct ", ",obstacles
R2217 T3177 T3176 amod large,size
R2218 T3178 T3176 prep of,size
R2219 T3176 T3174 pobj size,including
R222 T319 T317 pobj protein,of
R2220 T3180 T3168 punct ", ",promise
R2221 T3181 T3182 aux to,make
R2222 T3182 T3168 xcomp make,promise
R2223 T3179 T3178 pobj BRCA2,of
R2224 T3184 T3185 nsubj characterization,difficult
R2225 T3185 T3182 ccomp difficult,make
R2226 T3183 T3184 amod biochemical,characterization
R2227 T3187 T3188 compound BRCA2,function
R2228 T3186 T3184 prep of,characterization
R2229 T3189 T3168 punct .,promise
R223 T320 T321 dep that,are
R2231 T3188 T3186 pobj function,of
R224 T321 T307 relcl are,segments
R225 T322 T323 advmod highly,conserved
R226 T323 T321 acomp conserved,are
R227 T324 T321 prep among,are
R228 T325 T326 amod mammalian,orthologs
R229 T326 T324 pobj orthologs,among
R23 T61 T62 compound DNA,repair
R230 T327 T328 punct [,8
R231 T328 T304 parataxis 8,are
R232 T329 T328 nummod 7,8
R233 T330 T328 punct ",",8
R234 T331 T328 punct ],8
R235 T332 T286 punct .,offers
R24 T62 T60 pobj repair,in
R241 T437 T438 prep Following,provided
R242 T439 T440 det the,discovery
R243 T440 T437 pobj discovery,Following
R244 T441 T440 compound landmark,discovery
R245 T442 T440 prep by,discovery
R246 T443 T442 pobj Scully,by
R247 T444 T445 advmod et,al
R248 T445 T443 advmod al,Scully
R249 T446 T447 mark that,colocalizes
R25 T63 T46 punct .,provide
R250 T447 T440 acl colocalizes,discovery
R251 T448 T449 det the,RAD51
R252 T449 T447 nsubj RAD51,colocalizes
R253 T450 T449 amod homologous,RAD51
R254 T451 T449 compound recombinase,RAD51
R255 T452 T447 prep at,colocalizes
R256 T453 T454 amod subnuclear,sites
R257 T454 T452 pobj sites,at
R258 T455 T447 prep with,colocalizes
R259 T456 T455 pobj BRCA1,with
R26 T65 T66 nsubj Moynahan,provide
R260 T457 T458 punct [,9
R261 T458 T447 parataxis 9,colocalizes
R262 T459 T458 punct ],9
R263 T460 T438 punct ", ",provided
R264 T461 T462 det a,number
R265 T462 T438 nsubj number,provided
R266 T463 T462 prep of,number
R267 T464 T465 amod additional,results
R268 T465 T463 pobj results,of
R269 T466 T438 aux have,provided
R27 T67 T68 advmod et,al
R270 T467 T438 dobj evidence,provided
R271 T468 T469 mark that,involved
R272 T469 T467 acl involved,evidence
R273 T470 T471 preconj both,BRCA1
R274 T471 T469 nsubjpass BRCA1,involved
R275 T472 T471 cc and,BRCA1
R276 T473 T471 conj BRCA2,BRCA1
R277 T474 T469 auxpass are,involved
R278 T475 T469 prep in,involved
R279 T476 T477 amod recombinational,repair
R28 T68 T65 advmod al,Moynahan
R280 T477 T475 pobj repair,in
R281 T478 T477 prep of,repair
R282 T479 T480 compound DNA,damage
R283 T480 T478 pobj damage,of
R284 T481 T438 punct .,provided
R285 T483 T484 nsubj BRCA1,form
R286 T485 T483 cc and,BRCA1
R287 T486 T483 conj BRCA2,BRCA1
R288 T487 T488 amod discrete,foci
R289 T488 T484 dobj foci,form
R29 T69 T70 amod genetic,data
R290 T489 T488 amod nuclear,foci
R291 T490 T484 prep during,form
R292 T491 T492 det the,phase
R293 T492 T490 pobj phase,during
R294 T493 T492 compound S,phase
R295 T494 T490 cc and,during
R296 T495 T490 conj after,during
R297 T496 T495 pobj exposure,after
R298 T497 T496 prep to,exposure
R299 T498 T499 npadvmod DNA,damaging
R3 T38 T36 cc and,BRCA2
R30 T70 T66 dobj data,provide
R300 T499 T500 amod damaging,agents
R301 T500 T497 pobj agents,to
R302 T501 T502 punct [,11
R303 T502 T484 parataxis 11,form
R304 T503 T502 nummod 9,11
R305 T504 T502 punct ",",11
R306 T505 T502 nummod 10,11
R307 T506 T502 punct ",",11
R308 T507 T502 punct ],11
R309 T508 T484 punct .,form
R31 T71 T70 acl indicating,data
R310 T510 T511 det These,foci
R311 T511 T512 nsubj foci,are
R312 T513 T512 advmod probably,are
R313 T514 T512 attr sites,are
R314 T515 T514 prep of,sites
R315 T516 T515 pobj repair,of
R316 T517 T516 prep of,repair
R317 T518 T519 amod spontaneous,damage
R318 T519 T517 pobj damage,of
R319 T520 T518 cc and,spontaneous
R32 T72 T73 det a,requirement
R320 T521 T518 conj induced,spontaneous
R321 T522 T519 compound DNA,damage
R322 T523 T524 punct [,14
R323 T524 T512 parataxis 14,are
R324 T525 T524 nummod 12,14
R325 T526 T524 punct ",",14
R326 T527 T524 nummod 13,14
R327 T528 T524 punct ",",14
R328 T529 T524 punct ],14
R329 T530 T512 punct .,are
R33 T73 T71 dobj requirement,indicating
R330 T532 T533 compound Cell,lines
R331 T533 T534 nsubj lines,are
R332 T535 T533 amod defective,lines
R333 T536 T535 prep in,defective
R334 T537 T538 preconj either,BRCA1
R335 T538 T536 pobj BRCA1,in
R336 T539 T538 cc or,BRCA1
R337 T540 T538 conj BRCA2,BRCA1
R338 T541 T534 acomp sensitive,are
R339 T542 T541 prep to,sensitive
R34 T74 T73 prep for,requirement
R340 T543 T544 amod damaging,agents
R341 T544 T542 pobj agents,to
R342 T545 T546 dep that,form
R343 T546 T544 relcl form,agents
R344 T547 T548 amod double,strand
R345 T548 T550 amod strand,breaks
R346 T549 T548 punct -,strand
R347 T550 T546 dobj breaks,form
R348 T551 T550 punct (,breaks
R349 T552 T550 appos DSBs,breaks
R35 T75 T74 pobj BRCA2,for
R350 T553 T534 punct ),are
R351 T554 T534 punct ", ",are
R352 T555 T556 mark as,are
R353 T556 T534 advcl are,are
R354 T557 T558 amod other,lines
R355 T558 T556 nsubj lines,are
R356 T559 T558 compound cell,lines
R357 T560 T558 amod defective,lines
R358 T561 T560 prep in,defective
R359 T562 T563 amod recombinational,repair
R36 T76 T73 prep in,requirement
R360 T563 T561 pobj repair,in
R361 T564 T565 punct (,reviewed
R362 T565 T534 parataxis reviewed,are
R363 T566 T565 prep in,reviewed
R364 T567 T566 punct [,in
R365 T568 T566 pobj 15,in
R366 T569 T566 punct ],in
R367 T570 T565 punct ),reviewed
R368 T571 T534 punct .,are
R369 T573 T574 nsubj BRCA2,interacts
R37 T77 T78 amod homology,dependent
R370 T575 T574 prep with,interacts
R371 T576 T577 det the,recombinase
R372 T577 T575 pobj recombinase,with
R373 T578 T577 compound RAD51,recombinase
R374 T579 T574 prep via,interacts
R375 T580 T581 amod direct,contacts
R376 T581 T579 pobj contacts,via
R377 T582 T583 compound protein,protein
R378 T583 T581 compound protein,contacts
R379 T584 T583 punct -,protein
R38 T78 T80 amod dependent,recombinational
R380 T585 T586 punct [,19
R381 T586 T574 parataxis 19,interacts
R382 T587 T586 nummod 16,19
R383 T588 T586 punct ",",19
R384 T589 T586 nummod 17,19
R385 T590 T586 punct ",",19
R386 T591 T586 nummod 18,19
R387 T592 T586 punct ",",19
R388 T593 T586 punct ],19
R389 T594 T574 punct .,interacts
R39 T79 T78 punct -,dependent
R390 T596 T597 amod Biochemical,analysis
R391 T597 T598 nsubj analysis,showed
R392 T599 T598 advmod also,showed
R393 T600 T598 dobj interaction,showed
R394 T601 T600 prep between,interaction
R395 T602 T601 pobj BRCA1,between
R396 T603 T602 cc and,BRCA1
R397 T604 T602 conj RAD51,BRCA1
R398 T605 T598 punct ", ",showed
R399 T606 T607 mark although,been
R4 T39 T40 amod homologous,recombination
R40 T80 T82 amod recombinational,repair
R400 T607 T598 advcl been,showed
R401 T608 T609 det these,interactions
R402 T609 T607 nsubj interactions,been
R403 T610 T609 amod detected,interactions
R404 T611 T607 aux may,been
R405 T612 T607 aux have,been
R406 T613 T607 acomp indirect,been
R407 T614 T615 punct [,9
R408 T615 T598 parataxis 9,showed
R409 T616 T615 punct ],9
R41 T81 T80 punct (,recombinational
R410 T617 T598 punct .,showed
R411 T619 T620 det The,repeats
R412 T620 T622 nsubj repeats,are
R413 T621 T620 compound BRC,repeats
R414 T623 T620 prep of,repeats
R415 T624 T623 pobj BRCA2,of
R416 T625 T622 acomp responsible,are
R417 T626 T625 prep for,responsible
R418 T627 T628 amod direct,interaction
R419 T628 T626 pobj interaction,for
R42 T82 T76 pobj repair,in
R420 T629 T628 compound RAD51,interaction
R421 T630 T622 punct .,are
R422 T632 T633 nsubj Cells,fail
R423 T634 T632 acl lacking,Cells
R424 T635 T636 compound BRCA1,2
R425 T636 T634 dobj 2,lacking
R426 T637 T636 punct /,2
R427 T638 T639 aux to,form
R428 T639 T633 xcomp form,fail
R429 T640 T641 npadvmod damage,induced
R43 T83 T82 punct ),repair
R430 T641 T643 amod induced,RAD51
R431 T642 T641 punct -,induced
R432 T643 T645 compound RAD51,foci
R433 T644 T643 amod subnuclear,RAD51
R434 T645 T639 dobj foci,form
R435 T646 T639 prep with,form
R436 T647 T648 amod normal,efficiency
R437 T648 T646 pobj efficiency,with
R438 T649 T633 punct ", ",fail
R439 T650 T633 advcl suggesting,fail
R44 T84 T82 prep of,repair
R440 T651 T652 mark that,required
R441 T652 T650 ccomp required,suggesting
R442 T653 T654 det these,proteins
R443 T654 T652 nsubjpass proteins,required
R444 T655 T652 auxpass are,required
R445 T656 T652 prep for,required
R446 T657 T658 det the,formation
R447 T658 T656 pobj formation,for
R448 T659 T658 prep of,formation
R449 T660 T661 compound recombinase,complexes
R45 T85 T86 nmod DNA,breaks
R450 T661 T659 pobj complexes,of
R451 T662 T658 prep at,formation
R452 T663 T664 det the,sites
R453 T664 T662 pobj sites,at
R454 T665 T664 prep of,sites
R455 T666 T667 compound DNA,damage
R456 T667 T665 pobj damage,of
R457 T668 T669 punct [,21
R458 T669 T633 parataxis 21,fail
R459 T670 T669 nummod 20,21
R46 T86 T84 pobj breaks,of
R460 T671 T669 punct ",",21
R461 T672 T669 punct ],21
R462 T673 T633 punct .,fail
R463 T675 T676 advmod Finally,shown
R464 T677 T676 punct ", ",shown
R465 T678 T679 amod genetic,measurements
R466 T679 T676 nsubj measurements,shown
R467 T680 T679 prep of,measurements
R468 T681 T682 compound recombination,frequency
R469 T682 T680 pobj frequency,of
R47 T87 T88 amod double,strand
R470 T683 T676 aux have,shown
R471 T684 T685 mark that,are
R472 T685 T676 ccomp are,shown
R473 T686 T687 nmod Brca1,cells
R474 T687 T685 nsubj cells,are
R475 T688 T686 punct -,Brca1
R476 T689 T686 punct /,Brca1
R477 T690 T686 punct -,Brca1
R478 T691 T692 amod embryonic,stem
R479 T692 T687 nmod stem,cells
R48 T88 T86 compound strand,breaks
R480 T693 T692 punct (,stem
R481 T694 T692 appos ES,stem
R482 T695 T687 punct ),cells
R483 T696 T685 acomp deficient,are
R484 T697 T696 prep in,deficient
R485 T698 T699 amod recombinational,repair
R486 T699 T697 pobj repair,in
R487 T700 T699 compound DSB,repair
R488 T701 T702 punct [,23
R489 T702 T676 parataxis 23,shown
R49 T89 T88 punct -,strand
R490 T703 T702 nummod 22,23
R491 T704 T702 punct ",",23
R492 T705 T702 punct ],23
R493 T706 T676 punct .,shown
R494 T708 T709 det The,similarity
R495 T709 T710 nsubj similarity,led
R496 T711 T709 prep between,similarity
R497 T712 T711 pobj phenotypes,between
R498 T713 T712 acl associated,phenotypes
R499 T714 T713 prep with,associated
R5 T40 T36 conj recombination,BRCA2
R50 T90 T66 punct .,provide
R500 T715 T716 nmod BRCA1,deficiency
R501 T716 T714 pobj deficiency,with
R502 T717 T715 cc and,BRCA1
R503 T718 T715 conj BRCA2,BRCA1
R504 T719 T709 punct ", ",similarity
R505 T720 T721 advmod together,with
R506 T721 T709 prep with,similarity
R507 T722 T721 pobj data,with
R508 T723 T722 acl showing,data
R509 T724 T725 det a,effect
R51 T92 T93 det The,paper
R510 T725 T723 dobj effect,showing
R511 T726 T725 amod similar,effect
R512 T727 T725 prep of,effect
R513 T728 T729 compound DNA,damage
R514 T729 T727 pobj damage,of
R515 T730 T729 prep on,damage
R516 T731 T730 pobj distribution,on
R517 T732 T731 prep of,distribution
R518 T733 T732 pobj BRCA1,of
R519 T734 T733 cc and,BRCA1
R52 T93 T95 nsubj paper,begins
R520 T735 T733 conj BRCA2,BRCA1
R521 T736 T731 prep in,distribution
R522 T737 T738 npadvmod repair,proficient
R523 T738 T740 amod proficient,cells
R524 T739 T738 punct -,proficient
R525 T740 T736 pobj cells,in
R526 T741 T710 punct ", ",led
R527 T742 T710 prep to,led
R528 T743 T744 det the,hypothesis
R529 T744 T742 pobj hypothesis,to
R53 T94 T93 amod second,paper
R530 T745 T746 mark that,required
R531 T746 T744 acl required,hypothesis
R532 T747 T746 nsubjpass BRCA2,required
R533 T748 T747 punct ", ",BRCA2
R534 T749 T747 prep like,BRCA2
R535 T750 T749 pobj BRCA1,like
R536 T751 T746 punct ", ",required
R537 T752 T746 auxpass is,required
R538 T753 T746 prep for,required
R539 T754 T755 amod efficient,repair
R54 T96 T93 punct ", ",paper
R540 T755 T753 pobj repair,for
R541 T756 T755 amod recombinational,repair
R542 T757 T710 punct .,led
R543 T759 T760 det The,paper
R544 T760 T761 nsubj paper,provides
R545 T762 T760 prep by,paper
R546 T763 T762 pobj Moynahan,by
R547 T764 T765 advmod et,al
R548 T765 T763 advmod al,Moynahan
R549 T766 T767 punct [,24
R55 T97 T93 prep by,paper
R550 T767 T760 parataxis 24,paper
R551 T768 T767 punct ],24
R552 T769 T770 amod important,support
R553 T770 T761 dobj support,provides
R554 T771 T761 dative for,provides
R555 T772 T773 det this,hypothesis
R556 T773 T771 pobj hypothesis,for
R557 T774 T761 punct .,provides
R56 T98 T97 pobj Davies,by
R564 T1002 T1003 nsubj Pierce,designed
R565 T1004 T1005 advmod et,al
R566 T1005 T1002 advmod al,Pierce
R567 T1006 T1003 aux have,designed
R568 T1007 T1008 det a,set
R569 T1008 T1003 dobj set,designed
R57 T99 T100 advmod et,al
R570 T1009 T1008 prep of,set
R571 T1010 T1011 compound recombination,substrates
R572 T1011 T1009 pobj substrates,of
R573 T1012 T1003 prep for,designed
R574 T1013 T1012 pcomp measuring,for
R575 T1014 T1015 det the,level
R576 T1015 T1013 dobj level,measuring
R577 T1016 T1015 prep of,level
R578 T1017 T1018 amod homologous,recombination
R579 T1018 T1016 pobj recombination,of
R58 T100 T98 advmod al,Davies
R580 T1019 T1020 advmod in,vivo
R581 T1020 T1013 advmod vivo,measuring
R582 T1021 T1022 punct (,Fig.
R583 T1022 T1003 parataxis Fig.,designed
R584 T1023 T1022 nummod 1,Fig.
R585 T1024 T1022 punct ),Fig.
R586 T1025 T1026 punct [,25
R587 T1026 T1003 parataxis 25,designed
R588 T1027 T1026 punct ],25
R589 T1028 T1003 punct .,designed
R59 T101 T95 punct ", ",begins
R590 T1030 T1031 det The,substrate
R591 T1031 T1033 nsubj substrate,contains
R592 T1032 T1031 compound DNA,substrate
R593 T1034 T1035 det a,pair
R594 T1035 T1033 dobj pair,contains
R595 T1036 T1035 prep of,pair
R596 T1037 T1038 amod mutated,genes
R597 T1038 T1036 pobj genes,of
R598 T1039 T1038 compound GFP,genes
R599 T1040 T1041 punct (,encodes
R6 T43 T44 nummod Two,papers
R60 T102 T103 aux to,address
R600 T1041 T1035 parataxis encodes,pair
R601 T1042 T1041 nsubj GFP,encodes
R602 T1043 T1044 det the,protein
R603 T1044 T1041 dobj protein,encodes
R604 T1045 T1046 advmod easily,detected
R605 T1046 T1044 amod detected,protein
R606 T1047 T1044 amod green,protein
R607 T1048 T1044 amod fluorescent,protein
R608 T1049 T1041 punct ),encodes
R609 T1050 T1035 punct ", ",pair
R61 T103 T95 xcomp address,begins
R610 T1051 T1052 dep one,contains
R611 T1052 T1035 relcl contains,pair
R612 T1053 T1051 prep of,one
R613 T1054 T1053 pobj which,of
R614 T1055 T1056 det a,site
R615 T1056 T1052 dobj site,contains
R616 T1057 T1056 compound restriction,site
R617 T1058 T1056 prep for,site
R618 T1059 T1060 compound I,SceI
R619 T1060 T1058 pobj SceI,for
R62 T104 T105 det the,mechanism
R620 T1061 T1060 punct -,SceI
R621 T1062 T1060 punct ", ",SceI
R622 T1063 T1064 det a,endonuclease
R623 T1064 T1060 appos endonuclease,SceI
R624 T1065 T1066 compound yeast,intron
R625 T1066 T1067 npadvmod intron,encoded
R626 T1067 T1064 amod encoded,endonuclease
R627 T1068 T1064 prep with,endonuclease
R628 T1069 T1070 det an,site
R629 T1070 T1068 pobj site,with
R63 T105 T103 dobj mechanism,address
R630 T1071 T1072 nummod 18,pair
R631 T1072 T1070 compound pair,site
R632 T1073 T1072 compound base,pair
R633 T1074 T1070 compound recognition,site
R634 T1075 T1033 punct .,contains
R635 T1077 T1078 amod Transient,transfection
R636 T1078 T1079 nsubj transfection,results
R637 T1080 T1078 prep of,transfection
R638 T1081 T1082 det an,vector
R639 T1082 T1080 pobj vector,of
R64 T106 T107 prep through,makes
R640 T1083 T1084 compound I,SceI
R641 T1084 T1082 compound SceI,vector
R642 T1085 T1084 punct -,SceI
R643 T1086 T1082 compound expression,vector
R644 T1087 T1079 prep in,results
R645 T1088 T1089 det the,production
R646 T1089 T1087 pobj production,in
R647 T1090 T1089 prep of,production
R648 T1091 T1092 det a,DSB
R649 T1092 T1090 pobj DSB,of
R65 T107 T105 relcl makes,mechanism
R650 T1093 T1089 prep in,production
R651 T1094 T1095 det the,copy
R652 T1095 T1093 pobj copy,in
R653 T1096 T1095 amod first,copy
R654 T1097 T1095 amod mutated,copy
R655 T1098 T1095 prep of,copy
R656 T1099 T1098 pobj GFP,of
R657 T1100 T1079 punct .,results
R658 T1102 T1103 nsubj One,invade
R659 T1104 T1102 cc or,One
R66 T108 T106 pobj which,through
R660 T1105 T1106 nmod both,ends
R661 T1106 T1102 conj ends,One
R662 T1107 T1106 compound DNA,ends
R663 T1108 T1102 acl formed,One
R664 T1109 T1108 agent by,formed
R665 T1110 T1111 det the,break
R666 T1111 T1109 pobj break,by
R667 T1112 T1103 punct (,invade
R668 T1113 T1103 dep s,invade
R669 T1114 T1103 punct ),invade
R67 T109 T107 nsubj BRCA2,makes
R670 T1115 T1116 det the,sequence
R671 T1116 T1103 dobj sequence,invade
R672 T1117 T1116 amod homologous,sequence
R673 T1118 T1116 prep in,sequence
R674 T1119 T1120 det the,copy
R675 T1120 T1118 pobj copy,in
R676 T1121 T1120 amod second,copy
R677 T1122 T1123 amod mutant,GFP
R678 T1123 T1120 compound GFP,copy
R679 T1124 T1103 punct ", ",invade
R68 T110 T111 poss its,contribution
R680 T1125 T1103 advcl resulting,invade
R681 T1126 T1125 prep in,resulting
R682 T1127 T1126 pobj repair,in
R683 T1128 T1127 prep of,repair
R684 T1129 T1130 det the,DSB
R685 T1130 T1128 pobj DSB,of
R686 T1131 T1127 prep via,repair
R687 T1132 T1133 det a,event
R688 T1133 T1131 pobj event,via
R689 T1134 T1135 npadvmod homology,mediated
R69 T111 T107 dobj contribution,makes
R690 T1135 T1133 amod mediated,event
R691 T1136 T1135 punct -,mediated
R692 T1137 T1138 compound gene,conversion
R693 T1138 T1133 compound conversion,event
R694 T1139 T1103 punct .,invade
R695 T1141 T1142 det The,configuration
R696 T1142 T1143 nsubj configuration,is
R697 T1144 T1142 prep of,configuration
R698 T1145 T1146 det the,construct
R699 T1146 T1144 pobj construct,of
R7 T44 T46 nsubj papers,provide
R70 T112 T111 prep to,contribution
R700 T1147 T1146 compound GFP,construct
R701 T1148 T1143 acomp such,is
R702 T1149 T1150 mark that,results
R703 T1150 T1148 ccomp results,such
R704 T1151 T1152 npadvmod homology,mediated
R705 T1152 T1154 amod mediated,repair
R706 T1153 T1152 punct -,mediated
R707 T1154 T1150 nsubj repair,results
R708 T1155 T1150 advmod often,results
R709 T1156 T1150 prep in,results
R71 T113 T114 amod recombinational,repair
R710 T1157 T1158 det the,formation
R711 T1158 T1156 pobj formation,in
R712 T1159 T1158 prep of,formation
R713 T1160 T1161 det a,copy
R714 T1161 T1159 pobj copy,of
R715 T1162 T1161 amod functional,copy
R716 T1163 T1161 prep of,copy
R717 T1164 T1163 pobj GFP,of
R718 T1165 T1143 punct .,is
R719 T1167 T1168 amod Such,events
R72 T114 T112 pobj repair,to
R720 T1168 T1169 nsubjpass events,detected
R721 T1170 T1169 aux can,detected
R722 T1171 T1169 auxpass be,detected
R723 T1172 T1169 prep by,detected
R724 T1173 T1174 npadvmod fluorescence,activated
R725 T1174 T1176 amod activated,sorting
R726 T1175 T1174 punct -,activated
R727 T1176 T1178 compound sorting,analysis
R728 T1177 T1176 compound cell,sorting
R729 T1178 T1172 pobj analysis,by
R73 T115 T95 punct .,begins
R730 T1179 T1169 prep by,detected
R731 T1180 T1179 pobj virtue,by
R732 T1181 T1180 prep of,virtue
R733 T1182 T1183 poss their,expression
R734 T1183 T1181 pobj expression,of
R735 T1184 T1183 prep of,expression
R736 T1185 T1184 pobj GFP,of
R737 T1186 T1169 punct .,detected
R738 T1188 T1189 nsubj Moynahan,used
R739 T1190 T1191 advmod et,al
R74 T117 T118 nsubj BRCA2,appears
R740 T1191 T1188 advmod al,Moynahan
R741 T1192 T1193 punct [,24
R742 T1193 T1188 parataxis 24,Moynahan
R743 T1194 T1193 punct ],24
R744 T1195 T1189 aux have,used
R745 T1196 T1197 predet such,substrate
R746 T1197 T1189 dobj substrate,used
R747 T1198 T1197 det a,substrate
R748 T1199 T1200 compound GFP,recombination
R749 T1200 T1197 compound recombination,substrate
R75 T119 T120 aux to,function
R750 T1201 T1202 aux to,demonstrate
R751 T1202 T1189 advcl demonstrate,used
R752 T1203 T1204 mark that,are
R753 T1204 T1202 ccomp are,demonstrate
R754 T1205 T1204 nsubj cells,are
R755 T1206 T1205 prep with,cells
R756 T1207 T1208 amod defective,protein
R757 T1208 T1206 pobj protein,with
R758 T1209 T1208 compound BRCA2,protein
R759 T1210 T1204 acomp deficient,are
R76 T120 T118 xcomp function,appears
R760 T1211 T1210 prep in,deficient
R761 T1212 T1213 poss their,ability
R762 T1213 T1211 pobj ability,in
R763 T1214 T1215 aux to,repair
R764 T1215 T1213 acl repair,ability
R765 T1216 T1217 det the,DSB
R766 T1217 T1215 dobj DSB,repair
R767 T1218 T1219 compound I,SceI
R768 T1219 T1221 npadvmod SceI,induced
R769 T1220 T1219 punct -,SceI
R77 T121 T120 prep in,function
R770 T1221 T1217 amod induced,DSB
R771 T1222 T1221 punct -,induced
R772 T1223 T1215 prep through,repair
R773 T1224 T1225 amod homologous,recombination
R774 T1225 T1223 pobj recombination,through
R775 T1226 T1189 punct .,used
R776 T1228 T1229 nsubj Expression,resulted
R777 T1230 T1228 prep of,Expression
R778 T1231 T1232 compound I,SceI
R779 T1232 T1230 pobj SceI,of
R78 T122 T121 pobj recombination,in
R780 T1233 T1232 punct -,SceI
R781 T1234 T1229 prep in,resulted
R782 T1235 T1236 quantmod 1,1400
R783 T1236 T1239 nummod 1400,cells
R784 T1237 T1236 quantmod out,1400
R785 T1238 T1236 quantmod of,1400
R786 T1239 T1240 nsubj cells,producing
R787 T1240 T1234 pcomp producing,in
R788 T1241 T1240 dobj GFP,producing
R789 T1242 T1240 prep via,producing
R79 T123 T120 prep via,function
R790 T1243 T1244 amod homologous,recombination
R791 T1244 T1242 pobj recombination,via
R792 T1245 T1244 prep in,recombination
R793 T1246 T1247 det the,line
R794 T1247 T1245 pobj line,in
R795 T1248 T1249 amod human,cell
R796 T1249 T1247 compound cell,line
R797 T1250 T1249 amod pancreatic,cell
R798 T1251 T1249 compound tumor,cell
R799 T1252 T1247 appos CAPAN,line
R8 T45 T44 amod recent,papers
R80 T124 T123 pobj interactions,via
R800 T1253 T1252 punct -,CAPAN
R801 T1254 T1252 nummod 1,CAPAN
R802 T1255 T1229 punct .,resulted
R803 T1257 T1258 nmod CAPAN,cells
R804 T1258 T1261 nsubj cells,carry
R805 T1259 T1257 punct -,CAPAN
R806 T1260 T1257 nummod 1,CAPAN
R807 T1262 T1263 det a,deletion
R808 T1263 T1261 dobj deletion,carry
R809 T1264 T1263 prep of,deletion
R81 T125 T124 prep with,interactions
R810 T1265 T1264 pobj BRCA2,of
R811 T1266 T1261 prep on,carry
R812 T1267 T1268 nummod one,homolog
R813 T1268 T1266 pobj homolog,on
R814 T1269 T1261 cc and,carry
R815 T1270 T1261 conj codes,carry
R816 T1271 T1270 prep for,codes
R817 T1272 T1273 det a,protein
R818 T1273 T1271 pobj protein,for
R819 T1274 T1273 acl truncated,protein
R82 T126 T127 det the,recombinase
R820 T1275 T1274 prep at,truncated
R821 T1276 T1277 amod amino,acid
R822 T1277 T1275 pobj acid,at
R823 T1278 T1277 appos 1981,acid
R824 T1279 T1270 prep on,codes
R825 T1280 T1281 det the,homolog
R826 T1281 T1279 pobj homolog,on
R827 T1282 T1281 amod other,homolog
R828 T1283 T1261 punct .,carry
R829 T1285 T1286 det The,authors
R83 T127 T125 pobj recombinase,with
R830 T1286 T1287 nsubj authors,indicate
R831 T1288 T1289 mark that,is
R832 T1289 T1287 ccomp is,indicate
R833 T1290 T1291 det the,level
R834 T1291 T1289 nsubj level,is
R835 T1292 T1291 prep of,level
R836 T1293 T1294 compound I,SceI
R837 T1294 T1296 npadvmod SceI,induced
R838 T1295 T1294 punct -,SceI
R839 T1296 T1298 amod induced,recombination
R84 T128 T127 amod major,recombinase
R840 T1297 T1296 punct -,induced
R841 T1298 T1292 pobj recombination,of
R842 T1299 T1291 prep in,level
R843 T1300 T1299 pobj CAPAN,in
R844 T1301 T1300 punct -,CAPAN
R845 T1302 T1300 nummod 1,CAPAN
R846 T1303 T1304 quantmod over,100-fold
R847 T1304 T1305 advmod 100-fold,less
R848 T1305 T1289 acomp less,is
R849 T1306 T1305 prep than,less
R85 T129 T127 amod eukaryotic,recombinase
R850 T1307 T1306 pobj that,than
R851 T1308 T1307 acl seen,that
R852 T1309 T1308 advcl using,seen
R853 T1310 T1311 amod other,BRCA2+
R854 T1311 T1313 amod BRCA2+,lines
R855 T1312 T1311 punct (,BRCA2+
R856 T1313 T1309 dobj lines,using
R857 T1314 T1313 punct ),lines
R858 T1315 T1316 amod human,tumor
R859 T1316 T1317 compound tumor,cell
R86 T130 T127 appos RAD51,recombinase
R860 T1317 T1313 compound cell,lines
R861 T1318 T1287 punct .,indicate
R862 T1320 T1321 det The,lines
R863 T1321 T1323 nsubj lines,are
R864 T1322 T1321 amod different,lines
R865 T1324 T1321 acl examined,lines
R866 T1325 T1323 punct ", ",are
R867 T1326 T1323 advmod however,are
R868 T1327 T1323 punct ", ",are
R869 T1328 T1329 advmod very,likely
R87 T131 T132 punct [,3
R870 T1329 T1323 acomp likely,are
R871 T1330 T1331 aux to,differ
R872 T1331 T1329 xcomp differ,likely
R873 T1332 T1331 advmod genetically,differ
R874 T1333 T1331 prep from,differ
R875 T1334 T1335 nmod CAPAN,cells
R876 T1335 T1333 pobj cells,from
R877 T1336 T1334 punct -,CAPAN
R878 T1337 T1334 nummod 1,CAPAN
R879 T1338 T1339 preconj not,at
R88 T132 T118 parataxis 3,appears
R880 T1339 T1331 prep at,differ
R881 T1340 T1338 advmod only,not
R882 T1341 T1342 det the,locus
R883 T1342 T1339 pobj locus,at
R884 T1343 T1342 compound BRCA2,locus
R885 T1344 T1339 punct ", ",at
R886 T1345 T1339 cc but,at
R887 T1346 T1345 advmod also,but
R888 T1347 T1339 conj at,at
R889 T1348 T1349 det a,number
R89 T133 T132 nummod 1,3
R890 T1349 T1347 pobj number,at
R891 T1350 T1351 advmod very,large
R892 T1351 T1349 amod large,number
R893 T1352 T1349 prep of,number
R894 T1353 T1354 amod additional,loci
R895 T1354 T1352 pobj loci,of
R896 T1355 T1323 punct .,are
R897 T1357 T1358 nsubj This,raises
R898 T1359 T1360 det the,possibility
R899 T1360 T1358 dobj possibility,raises
R9 T47 T48 amod new,evidence
R90 T134 T132 punct ",",3
R900 T1361 T1362 mark that,be
R901 T1362 T1360 acl be,possibility
R902 T1363 T1362 nsubj some,be
R903 T1364 T1363 cc or,some
R904 T1365 T1366 advmod even,all
R905 T1366 T1363 conj all,some
R906 T1367 T1363 prep of,some
R907 T1368 T1369 det the,defect
R908 T1369 T1367 pobj defect,of
R909 T1370 T1369 amod recombinational,defect
R91 T135 T132 nummod 2,3
R910 T1371 T1369 compound repair,defect
R911 T1372 T1369 acl seen,defect
R912 T1373 T1372 prep in,seen
R913 T1374 T1373 pobj CAPAN,in
R914 T1375 T1374 punct -,CAPAN
R915 T1376 T1374 nummod 1,CAPAN
R916 T1377 T1362 aux could,be
R917 T1378 T1362 prep due,be
R918 T1379 T1378 pcomp to,due
R919 T1380 T1378 pobj mutations,due
R92 T136 T132 punct ",",3
R920 T1381 T1380 prep at,mutations
R921 T1382 T1383 amod non-BRCA2,loci
R922 T1383 T1381 pobj loci,at
R923 T1384 T1358 punct .,raises
R924 T1386 T1387 mark While,were
R925 T1387 T1391 advcl were,argue
R926 T1388 T1387 nsubj Moynahan,were
R927 T1389 T1390 advmod et,al
R928 T1390 T1388 advmod al,Moynahan
R929 T1392 T1387 acomp careful,were
R93 T137 T132 punct ],3
R930 T1393 T1394 aux to,point
R931 T1394 T1392 xcomp point,careful
R932 T1395 T1394 prt out,point
R933 T1396 T1397 det this,problem
R934 T1397 T1394 dobj problem,point
R935 T1398 T1391 punct ", ",argue
R936 T1399 T1400 nummod two,sets
R937 T1400 T1391 nsubj sets,argue
R938 T1401 T1400 prep of,sets
R939 T1402 T1401 pobj results,of
R94 T138 T118 punct .,appears
R940 T1403 T1391 prep against,argue
R941 T1404 T1405 det the,possibility
R942 T1405 T1403 pobj possibility,against
R943 T1406 T1407 mark that,is
R944 T1407 T1405 acl is,possibility
R945 T1408 T1409 det the,deficiency
R946 T1409 T1407 nsubj deficiency,is
R947 T1410 T1409 amod recombinational,deficiency
R948 T1411 T1409 compound repair,deficiency
R949 T1412 T1409 prep of,deficiency
R95 T140 T141 nsubj We,review
R950 T1413 T1414 nmod CAPAN,cells
R951 T1414 T1412 pobj cells,of
R952 T1415 T1413 punct -,CAPAN
R953 T1416 T1413 nummod 1,CAPAN
R954 T1417 T1418 advmod completely,independent
R955 T1418 T1407 acomp independent,is
R956 T1419 T1418 prep of,independent
R957 T1420 T1421 poss its,defect
R958 T1421 T1419 pobj defect,of
R959 T1422 T1421 prep in,defect
R96 T142 T141 advmod briefly,review
R960 T1423 T1422 pobj BRCA2,in
R961 T1424 T1391 punct .,argue
R962 T1426 T1427 advmod First,measured
R963 T1428 T1427 punct ", ",measured
R964 T1429 T1427 prep in,measured
R965 T1430 T1431 det the,study
R966 T1431 T1429 pobj study,in
R967 T1432 T1431 amod same,study
R968 T1433 T1434 punct [,24
R969 T1434 T1431 parataxis 24,study
R97 T143 T144 det the,context
R970 T1435 T1434 punct ],24
R971 T1436 T1427 punct ", ",measured
R972 T1437 T1427 nsubjpass recombination,measured
R973 T1438 T1437 prep in,recombination
R974 T1439 T1440 det a,line
R975 T1440 T1438 pobj line,in
R976 T1441 T1440 compound mouse,line
R977 T1442 T1440 compound ES,line
R978 T1443 T1440 compound cell,line
R979 T1444 T1445 dep that,expresses
R98 T144 T141 dobj context,review
R980 T1445 T1440 relcl expresses,line
R981 T1446 T1447 advmod only,protein
R982 T1447 T1445 dobj protein,expresses
R983 T1448 T1447 amod truncated,protein
R984 T1449 T1447 compound BRCA2,protein
R985 T1450 T1427 auxpass was,measured
R986 T1451 T1427 punct .,measured
R987 T1453 T1454 det This,line
R988 T1454 T1455 nsubjpass line,found
R989 T1456 T1455 auxpass was,found
R99 T145 T146 prep in,carried
R990 T1457 T1458 aux to,have
R991 T1458 T1455 xcomp have,found
R992 T1459 T1460 amod lower,efficiency
R993 T1460 T1458 dobj efficiency,have
R994 T1461 T1460 compound recombination,efficiency
R995 T1462 T1460 prep than,efficiency
R996 T1463 T1464 amod isogenic,cells
R997 T1464 T1462 pobj cells,than
R998 T1465 T1464 acl expressing,cells
R999 T1466 T1467 amod full,length