PMC:1382200 / 32754-33924 JSONTXT 4 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T17462 0-2 NN denotes ES
T17464 3-7 NN denotes cell
T17463 8-15 NN denotes culture
T17465 15-17 , denotes ,
T17466 17-29 NN denotes transfection
T17467 30-33 CC denotes and
T17468 34-43 NN denotes selection
T17469 44-46 IN denotes of
T17470 47-55 VBN denotes targeted
T17471 56-62 NNS denotes clones
T17472 62-481 sentence denotes Mouse R1 ES cells [49] were maintained on gelatin-coated plates with feeder layers of mouse embryonic fibroblasts at 37°C under 5% CO2 in ES cell medium (DMEM [high glucose] supplemented with 15% fetal bovine serum, 0.1 mM non-essential amino acids, 2 mM glutamine, 1 mM sodium pyruvate, 0.1 mM 2-mercaptoethanol, 100 U/ml penicillin, 100 μg/ml streptomycin, 25 μg/ml amphotericin, and 1,000 U/ml of ESGro [Chemicon]).
T17473 63-68 NN denotes Mouse
T17475 69-71 NN denotes R1
T17476 72-74 NN denotes ES
T17474 75-80 NNS denotes cells
T17478 81-82 -LRB- denotes [
T17479 82-84 CD denotes 49
T17480 84-85 -RRB- denotes ]
T17481 86-90 VBD denotes were
T17477 91-101 VBN denotes maintained
T17482 102-104 IN denotes on
T17483 105-112 NN denotes gelatin
T17485 112-113 HYPH denotes -
T17484 113-119 VBN denotes coated
T17486 120-126 NNS denotes plates
T17487 127-131 IN denotes with
T17488 132-138 NN denotes feeder
T17489 139-145 NNS denotes layers
T17490 146-148 IN denotes of
T17491 149-154 NN denotes mouse
T17493 155-164 JJ denotes embryonic
T17492 165-176 NNS denotes fibroblasts
T17494 177-179 IN denotes at
T17495 180-182 CD denotes 37
T17496 182-184 NN denotes °C
T17497 185-190 IN denotes under
T17498 191-192 CD denotes 5
T17499 192-193 NN denotes %
T17500 194-197 NN denotes CO2
T17501 198-200 IN denotes in
T17502 201-203 NN denotes ES
T17504 204-208 NN denotes cell
T17503 209-215 NN denotes medium
T17505 216-217 -LRB- denotes (
T17506 217-221 NN denotes DMEM
T17507 222-223 -LRB- denotes [
T17509 223-227 JJ denotes high
T17508 228-235 NN denotes glucose
T17510 235-236 -RRB- denotes ]
T17511 237-249 VBN denotes supplemented
T17512 250-254 IN denotes with
T17513 255-257 CD denotes 15
T17514 257-258 NN denotes %
T17516 259-264 JJ denotes fetal
T17517 265-271 JJ denotes bovine
T17515 272-277 NN denotes serum
T17518 277-279 , denotes ,
T17519 279-282 CD denotes 0.1
T17520 283-285 NN denotes mM
T17522 286-299 JJ denotes non-essential
T17523 300-305 NN denotes amino
T17521 306-311 NNS denotes acids
T17524 311-313 , denotes ,
T17525 313-314 CD denotes 2
T17526 315-317 NN denotes mM
T17527 318-327 NN denotes glutamine
T17528 327-329 , denotes ,
T17529 329-330 CD denotes 1
T17530 331-333 NN denotes mM
T17532 334-340 NN denotes sodium
T17531 341-349 NN denotes pyruvate
T17533 349-351 , denotes ,
T17534 351-354 CD denotes 0.1
T17535 355-357 NN denotes mM
T17537 358-359 CD denotes 2
T17538 359-360 HYPH denotes -
T17536 360-375 NN denotes mercaptoethanol
T17539 375-377 , denotes ,
T17540 377-380 CD denotes 100
T17541 381-382 NN denotes U
T17543 382-383 SYM denotes /
T17544 383-385 NN denotes ml
T17542 386-396 NN denotes penicillin
T17545 396-398 , denotes ,
T17546 398-401 CD denotes 100
T17547 402-404 NN denotes μg
T17549 404-405 SYM denotes /
T17550 405-407 NN denotes ml
T17548 408-420 NN denotes streptomycin
T17551 420-422 , denotes ,
T17552 422-424 CD denotes 25
T17553 425-427 NN denotes μg
T17555 427-428 SYM denotes /
T17556 428-430 NN denotes ml
T17554 431-443 NN denotes amphotericin
T17557 443-445 , denotes ,
T17558 445-448 CC denotes and
T17559 449-454 CD denotes 1,000
T17560 455-456 NN denotes U
T17561 456-457 SYM denotes /
T17562 457-459 NN denotes ml
T17563 460-462 IN denotes of
T17564 463-468 NN denotes ESGro
T17565 469-470 -LRB- denotes [
T17566 470-478 NNP denotes Chemicon
T17567 478-479 -RRB- denotes ]
T17568 479-480 -RRB- denotes )
T17569 480-481 . denotes .
T17570 481-598 sentence denotes Fetal bovine serum from HyClone Laboratories Inc (Logan, Utah) was tested for its ability to support ES cell growth.
T17571 482-487 JJ denotes Fetal
T17573 488-494 JJ denotes bovine
T17572 495-500 NN denotes serum
T17575 501-505 IN denotes from
T17576 506-513 NNP denotes HyClone
T17578 514-526 NNP denotes Laboratories
T17577 527-530 NNP denotes Inc
T17579 531-532 -LRB- denotes (
T17580 532-537 NNP denotes Logan
T17581 537-539 , denotes ,
T17582 539-543 NNP denotes Utah
T17583 543-544 -RRB- denotes )
T17584 545-548 VBD denotes was
T17574 549-555 VBN denotes tested
T17585 556-559 IN denotes for
T17586 560-563 PRP$ denotes its
T17587 564-571 NN denotes ability
T17588 572-574 TO denotes to
T17589 575-582 VB denotes support
T17590 583-585 NN denotes ES
T17591 586-590 NN denotes cell
T17592 591-597 NN denotes growth
T17593 597-598 . denotes .
T17594 598-657 sentence denotes Gelatin was from Sigma-Aldrich Canada (Oakville, Ontario).
T17595 599-606 NN denotes Gelatin
T17596 607-610 VBD denotes was
T17597 611-615 IN denotes from
T17598 616-621 NNP denotes Sigma
T17600 621-622 HYPH denotes -
T17599 622-629 NNP denotes Aldrich
T17601 630-636 NNP denotes Canada
T17602 637-638 -LRB- denotes (
T17603 638-646 NNP denotes Oakville
T17604 646-648 , denotes ,
T17605 648-655 NNP denotes Ontario
T17606 655-656 -RRB- denotes )
T17607 656-657 . denotes .
T17608 657-740 sentence denotes Unless otherwise specified, all other tissue culture reagents were from Gibco-BRL.
T17609 658-664 IN denotes Unless
T17611 665-674 RB denotes otherwise
T17610 675-684 VBN denotes specified
T17613 684-686 , denotes ,
T17614 686-689 DT denotes all
T17616 690-695 JJ denotes other
T17617 696-702 NN denotes tissue
T17618 703-710 NN denotes culture
T17615 711-719 NNS denotes reagents
T17612 720-724 VBD denotes were
T17619 725-729 IN denotes from
T17620 730-735 NNP denotes Gibco
T17622 735-736 HYPH denotes -
T17621 736-739 NNP denotes BRL
T17623 739-740 . denotes .
T17624 740-834 sentence denotes The targeting construct was linearized by NotI digestion and electroporated into R1 ES cells.
T17625 741-744 DT denotes The
T17627 745-754 NN denotes targeting
T17626 755-764 NN denotes construct
T17629 765-768 VBD denotes was
T17628 769-779 VBN denotes linearized
T17630 780-782 IN denotes by
T17631 783-787 NN denotes NotI
T17632 788-797 NN denotes digestion
T17633 798-801 CC denotes and
T17634 802-816 VBN denotes electroporated
T17635 817-821 IN denotes into
T17636 822-824 NN denotes R1
T17638 825-827 NN denotes ES
T17637 828-833 NNS denotes cells
T17639 833-834 . denotes .
T17640 834-1035 sentence denotes Cells were plated without feeder layers on gelatin-coated plates and transformed clones were selected in the presence of 200 μg/ml G418 (Gibco- BRL) and 2 μM ganciclovir (Syntex, Inc.) for eight days.
T17641 835-840 NNS denotes Cells
T17643 841-845 VBD denotes were
T17642 846-852 VBN denotes plated
T17644 853-860 IN denotes without
T17645 861-867 NN denotes feeder
T17646 868-874 NNS denotes layers
T17647 875-877 IN denotes on
T17648 878-885 NN denotes gelatin
T17650 885-886 HYPH denotes -
T17649 886-892 VBN denotes coated
T17651 893-899 NNS denotes plates
T17652 900-903 CC denotes and
T17653 904-915 VBN denotes transformed
T17654 916-922 NNS denotes clones
T17656 923-927 VBD denotes were
T17655 928-936 VBN denotes selected
T17657 937-939 IN denotes in
T17658 940-943 DT denotes the
T17659 944-952 NN denotes presence
T17660 953-955 IN denotes of
T17661 956-959 CD denotes 200
T17662 960-962 NN denotes μg
T17664 962-963 SYM denotes /
T17665 963-965 NN denotes ml
T17663 966-970 NN denotes G418
T17666 971-972 -LRB- denotes (
T17668 972-977 NNP denotes Gibco
T17669 977-978 HYPH denotes -
T17667 979-982 NNP denotes BRL
T17670 982-983 -RRB- denotes )
T17671 984-987 CC denotes and
T17672 988-989 CD denotes 2
T17673 990-992 NN denotes μM
T17674 993-1004 NN denotes ganciclovir
T17675 1005-1006 -LRB- denotes (
T17676 1006-1012 NNP denotes Syntex
T17677 1012-1014 , denotes ,
T17678 1014-1018 NNP denotes Inc.
T17679 1018-1019 -RRB- denotes )
T17680 1020-1023 IN denotes for
T17681 1024-1029 CD denotes eight
T17682 1030-1034 NNS denotes days
T17683 1034-1035 . denotes .
T17684 1035-1170 sentence denotes Drug-resistant clones were picked, expanded on gelatin-coated plates, and genotyped by Southern blotting and PCR analysis (see below).
T17685 1036-1040 NN denotes Drug
T17687 1040-1041 HYPH denotes -
T17686 1041-1050 JJ denotes resistant
T17688 1051-1057 NNS denotes clones
T17690 1058-1062 VBD denotes were
T17689 1063-1069 VBN denotes picked
T17691 1069-1071 , denotes ,
T17692 1071-1079 VBN denotes expanded
T17693 1080-1082 IN denotes on
T17694 1083-1090 NN denotes gelatin
T17696 1090-1091 HYPH denotes -
T17695 1091-1097 VBN denotes coated
T17697 1098-1104 NNS denotes plates
T17698 1104-1106 , denotes ,
T17699 1106-1109 CC denotes and
T17700 1110-1119 VBN denotes genotyped
T17701 1120-1122 IN denotes by
T17702 1123-1131 NNP denotes Southern
T17703 1132-1140 NN denotes blotting
T17704 1141-1144 CC denotes and
T17705 1145-1148 NN denotes PCR
T17706 1149-1157 NN denotes analysis
T17707 1158-1159 -LRB- denotes (
T17708 1159-1162 VB denotes see
T17709 1163-1168 RB denotes below
T17710 1168-1169 -RRB- denotes )
T17711 1169-1170 . denotes .
R5122 T17462 T17463 compound ES,culture
R5123 T17464 T17463 compound cell,culture
R5124 T17465 T17463 punct ", ",culture
R5125 T17466 T17463 conj transfection,culture
R5126 T17467 T17466 cc and,transfection
R5127 T17468 T17466 conj selection,transfection
R5128 T17469 T17468 prep of,selection
R5129 T17470 T17471 amod targeted,clones
R5130 T17471 T17469 pobj clones,of
R5131 T17473 T17474 compound Mouse,cells
R5132 T17474 T17477 nsubjpass cells,maintained
R5133 T17475 T17474 compound R1,cells
R5134 T17476 T17474 compound ES,cells
R5135 T17478 T17479 punct [,49
R5136 T17479 T17474 parataxis 49,cells
R5137 T17480 T17479 punct ],49
R5138 T17481 T17477 auxpass were,maintained
R5139 T17482 T17477 prep on,maintained
R5140 T17483 T17484 npadvmod gelatin,coated
R5141 T17484 T17486 amod coated,plates
R5142 T17485 T17484 punct -,coated
R5143 T17486 T17482 pobj plates,on
R5144 T17487 T17477 prep with,maintained
R5145 T17488 T17489 compound feeder,layers
R5146 T17489 T17487 pobj layers,with
R5147 T17490 T17489 prep of,layers
R5148 T17491 T17492 nmod mouse,fibroblasts
R5149 T17492 T17490 pobj fibroblasts,of
R5150 T17493 T17492 amod embryonic,fibroblasts
R5151 T17494 T17477 prep at,maintained
R5152 T17495 T17496 nummod 37,°C
R5153 T17496 T17494 pobj °C,at
R5154 T17497 T17477 prep under,maintained
R5155 T17498 T17499 nummod 5,%
R5156 T17499 T17500 compound %,CO2
R5157 T17500 T17497 pobj CO2,under
R5158 T17501 T17477 prep in,maintained
R5159 T17502 T17503 compound ES,medium
R5160 T17503 T17501 pobj medium,in
R5161 T17504 T17503 compound cell,medium
R5162 T17505 T17506 punct (,DMEM
R5163 T17506 T17477 parataxis DMEM,maintained
R5164 T17507 T17508 punct [,glucose
R5165 T17508 T17506 parataxis glucose,DMEM
R5166 T17509 T17508 amod high,glucose
R5167 T17510 T17506 punct ],DMEM
R5168 T17511 T17506 acl supplemented,DMEM
R5169 T17512 T17511 prep with,supplemented
R5170 T17513 T17514 nummod 15,%
R5171 T17514 T17515 nmod %,serum
R5172 T17515 T17512 pobj serum,with
R5173 T17516 T17515 amod fetal,serum
R5174 T17517 T17515 amod bovine,serum
R5175 T17518 T17515 punct ", ",serum
R5176 T17519 T17520 nummod 0.1,mM
R5177 T17520 T17521 nmod mM,acids
R5178 T17521 T17515 conj acids,serum
R5179 T17522 T17521 amod non-essential,acids
R5180 T17523 T17521 compound amino,acids
R5181 T17524 T17521 punct ", ",acids
R5182 T17525 T17526 nummod 2,mM
R5183 T17526 T17527 compound mM,glutamine
R5184 T17527 T17521 conj glutamine,acids
R5185 T17528 T17527 punct ", ",glutamine
R5186 T17529 T17530 nummod 1,mM
R5187 T17530 T17531 compound mM,pyruvate
R5188 T17531 T17527 conj pyruvate,glutamine
R5189 T17532 T17531 compound sodium,pyruvate
R5190 T17533 T17531 punct ", ",pyruvate
R5191 T17534 T17535 nummod 0.1,mM
R5192 T17535 T17536 nmod mM,mercaptoethanol
R5193 T17536 T17531 conj mercaptoethanol,pyruvate
R5194 T17537 T17536 nummod 2,mercaptoethanol
R5195 T17538 T17536 punct -,mercaptoethanol
R5196 T17539 T17536 punct ", ",mercaptoethanol
R5197 T17540 T17541 nummod 100,U
R5198 T17541 T17542 nmod U,penicillin
R5199 T17542 T17536 conj penicillin,mercaptoethanol
R5200 T17543 T17544 punct /,ml
R5201 T17544 T17541 prep ml,U
R5202 T17545 T17542 punct ", ",penicillin
R5203 T17546 T17547 nummod 100,μg
R5204 T17547 T17548 nmod μg,streptomycin
R5205 T17548 T17542 conj streptomycin,penicillin
R5206 T17549 T17550 punct /,ml
R5207 T17550 T17547 prep ml,μg
R5208 T17551 T17548 punct ", ",streptomycin
R5209 T17552 T17553 nummod 25,μg
R5210 T17553 T17554 nmod μg,amphotericin
R5211 T17554 T17548 conj amphotericin,streptomycin
R5212 T17555 T17556 punct /,ml
R5213 T17556 T17553 prep ml,μg
R5214 T17557 T17554 punct ", ",amphotericin
R5215 T17558 T17554 cc and,amphotericin
R5216 T17559 T17560 nummod "1,000",U
R5217 T17560 T17554 conj U,amphotericin
R5218 T17561 T17562 punct /,ml
R5219 T17562 T17560 prep ml,U
R5220 T17563 T17560 prep of,U
R5221 T17564 T17563 pobj ESGro,of
R5222 T17565 T17566 punct [,Chemicon
R5223 T17566 T17564 parataxis Chemicon,ESGro
R5224 T17567 T17566 punct ],Chemicon
R5225 T17568 T17477 punct ),maintained
R5226 T17569 T17477 punct .,maintained
R5227 T17571 T17572 amod Fetal,serum
R5228 T17572 T17574 nsubjpass serum,tested
R5229 T17573 T17572 amod bovine,serum
R5230 T17575 T17572 prep from,serum
R5231 T17576 T17577 compound HyClone,Inc
R5232 T17577 T17575 pobj Inc,from
R5233 T17578 T17577 compound Laboratories,Inc
R5234 T17579 T17580 punct (,Logan
R5235 T17580 T17577 parataxis Logan,Inc
R5236 T17581 T17580 punct ", ",Logan
R5237 T17582 T17580 npadvmod Utah,Logan
R5238 T17583 T17580 punct ),Logan
R5239 T17584 T17574 auxpass was,tested
R5240 T17585 T17574 prep for,tested
R5241 T17586 T17587 poss its,ability
R5242 T17587 T17585 pobj ability,for
R5243 T17588 T17589 aux to,support
R5244 T17589 T17587 acl support,ability
R5245 T17590 T17591 compound ES,cell
R5246 T17591 T17592 compound cell,growth
R5247 T17592 T17589 dobj growth,support
R5248 T17593 T17574 punct .,tested
R5249 T17595 T17596 nsubj Gelatin,was
R5250 T17597 T17596 prep from,was
R5251 T17598 T17599 compound Sigma,Aldrich
R5252 T17599 T17601 compound Aldrich,Canada
R5253 T17600 T17599 punct -,Aldrich
R5254 T17601 T17597 pobj Canada,from
R5255 T17602 T17603 punct (,Oakville
R5256 T17603 T17596 parataxis Oakville,was
R5257 T17604 T17603 punct ", ",Oakville
R5258 T17605 T17603 npadvmod Ontario,Oakville
R5259 T17606 T17603 punct ),Oakville
R5260 T17607 T17596 punct .,was
R5261 T17609 T17610 mark Unless,specified
R5262 T17610 T17612 advcl specified,were
R5263 T17611 T17610 advmod otherwise,specified
R5264 T17613 T17612 punct ", ",were
R5265 T17614 T17615 det all,reagents
R5266 T17615 T17612 nsubj reagents,were
R5267 T17616 T17615 amod other,reagents
R5268 T17617 T17618 compound tissue,culture
R5269 T17618 T17615 compound culture,reagents
R5270 T17619 T17612 prep from,were
R5271 T17620 T17621 compound Gibco,BRL
R5272 T17621 T17619 pobj BRL,from
R5273 T17622 T17621 punct -,BRL
R5274 T17623 T17612 punct .,were
R5275 T17625 T17626 det The,construct
R5276 T17626 T17628 nsubjpass construct,linearized
R5277 T17627 T17626 compound targeting,construct
R5278 T17629 T17628 auxpass was,linearized
R5279 T17630 T17628 agent by,linearized
R5280 T17631 T17632 compound NotI,digestion
R5281 T17632 T17630 pobj digestion,by
R5282 T17633 T17628 cc and,linearized
R5283 T17634 T17628 conj electroporated,linearized
R5284 T17635 T17634 prep into,electroporated
R5285 T17636 T17637 compound R1,cells
R5286 T17637 T17635 pobj cells,into
R5287 T17638 T17637 compound ES,cells
R5288 T17639 T17628 punct .,linearized
R5289 T17641 T17642 nsubjpass Cells,plated
R5290 T17643 T17642 auxpass were,plated
R5291 T17644 T17642 prep without,plated
R5292 T17645 T17646 compound feeder,layers
R5293 T17646 T17644 pobj layers,without
R5294 T17647 T17642 prep on,plated
R5295 T17648 T17649 npadvmod gelatin,coated
R5296 T17649 T17651 amod coated,plates
R5297 T17650 T17649 punct -,coated
R5298 T17651 T17647 pobj plates,on
R5299 T17652 T17642 cc and,plated
R5300 T17653 T17654 amod transformed,clones
R5301 T17654 T17655 nsubjpass clones,selected
R5302 T17655 T17642 conj selected,plated
R5303 T17656 T17655 auxpass were,selected
R5304 T17657 T17655 prep in,selected
R5305 T17658 T17659 det the,presence
R5306 T17659 T17657 pobj presence,in
R5307 T17660 T17659 prep of,presence
R5308 T17661 T17662 nummod 200,μg
R5309 T17662 T17663 nmod μg,G418
R5310 T17663 T17660 pobj G418,of
R5311 T17664 T17665 punct /,ml
R5312 T17665 T17662 prep ml,μg
R5313 T17666 T17667 punct (,BRL
R5314 T17667 T17663 parataxis BRL,G418
R5315 T17668 T17667 compound Gibco,BRL
R5316 T17669 T17667 punct -,BRL
R5317 T17670 T17667 punct ),BRL
R5318 T17671 T17663 cc and,G418
R5319 T17672 T17673 nummod 2,μM
R5320 T17673 T17674 compound μM,ganciclovir
R5321 T17674 T17663 conj ganciclovir,G418
R5322 T17675 T17676 punct (,Syntex
R5323 T17676 T17674 parataxis Syntex,ganciclovir
R5324 T17677 T17676 punct ", ",Syntex
R5325 T17678 T17676 amod Inc.,Syntex
R5326 T17679 T17676 punct ),Syntex
R5327 T17680 T17655 prep for,selected
R5328 T17681 T17682 nummod eight,days
R5329 T17682 T17680 pobj days,for
R5330 T17683 T17655 punct .,selected
R5331 T17685 T17686 npadvmod Drug,resistant
R5332 T17686 T17688 amod resistant,clones
R5333 T17687 T17686 punct -,resistant
R5334 T17688 T17689 nsubjpass clones,picked
R5335 T17690 T17689 auxpass were,picked
R5336 T17691 T17689 punct ", ",picked
R5337 T17692 T17689 conj expanded,picked
R5338 T17693 T17692 prep on,expanded
R5339 T17694 T17695 npadvmod gelatin,coated
R5340 T17695 T17697 amod coated,plates
R5341 T17696 T17695 punct -,coated
R5342 T17697 T17693 pobj plates,on
R5343 T17698 T17692 punct ", ",expanded
R5344 T17699 T17692 cc and,expanded
R5345 T17700 T17692 conj genotyped,expanded
R5346 T17701 T17700 prep by,genotyped
R5347 T17702 T17703 compound Southern,blotting
R5348 T17703 T17701 pobj blotting,by
R5349 T17704 T17703 cc and,blotting
R5350 T17705 T17706 compound PCR,analysis
R5351 T17706 T17703 conj analysis,blotting
R5352 T17707 T17708 punct (,see
R5353 T17708 T17700 parataxis see,genotyped
R5354 T17709 T17708 advmod below,see
R5355 T17710 T17708 punct ),see
R5356 T17711 T17689 punct .,picked