Id |
Subject |
Object |
Predicate |
Lexical cue |
T2209 |
0-11 |
NN |
denotes |
Correlation |
T2211 |
12-14 |
IN |
denotes |
of |
T2212 |
15-19 |
DT |
denotes |
each |
T2213 |
20-22 |
IN |
denotes |
of |
T2214 |
23-26 |
DT |
denotes |
the |
T2216 |
27-30 |
CD |
denotes |
six |
T2217 |
31-44 |
NN |
denotes |
transcription |
T2215 |
45-52 |
NNS |
denotes |
factors |
T2218 |
53-57 |
IN |
denotes |
with |
T2219 |
58-62 |
DT |
denotes |
each |
T2220 |
63-65 |
IN |
denotes |
of |
T2221 |
66-69 |
DT |
denotes |
the |
T2223 |
70-81 |
NN |
denotes |
antioxidant |
T2224 |
82-84 |
CC |
denotes |
or |
T2225 |
85-88 |
NN |
denotes |
DNA |
T2226 |
89-95 |
NN |
denotes |
repair |
T2222 |
96-101 |
NNS |
denotes |
genes |
T2227 |
102-105 |
VBD |
denotes |
was |
T2210 |
106-116 |
VBN |
denotes |
determined |
T2228 |
117-119 |
IN |
denotes |
by |
T2229 |
120-127 |
NNP |
denotes |
Pearson |
T2231 |
127-129 |
POS |
denotes |
's |
T2230 |
130-141 |
NN |
denotes |
correlation |
T2232 |
142-151 |
VBG |
denotes |
following |
T2233 |
152-163 |
JJ |
denotes |
logarithmic |
T2234 |
164-178 |
NN |
denotes |
transformation |
T2235 |
178-179 |
. |
denotes |
. |
T2236 |
179-299 |
sentence |
denotes |
The transformation was necessary due to the wide biological variation in expression of each gene among the individuals. |
T2237 |
180-183 |
DT |
denotes |
The |
T2238 |
184-198 |
NN |
denotes |
transformation |
T2239 |
199-202 |
VBD |
denotes |
was |
T2240 |
203-212 |
JJ |
denotes |
necessary |
T2241 |
213-216 |
IN |
denotes |
due |
T2242 |
217-219 |
IN |
denotes |
to |
T2243 |
220-223 |
DT |
denotes |
the |
T2245 |
224-228 |
JJ |
denotes |
wide |
T2246 |
229-239 |
JJ |
denotes |
biological |
T2244 |
240-249 |
NN |
denotes |
variation |
T2247 |
250-252 |
IN |
denotes |
in |
T2248 |
253-263 |
NN |
denotes |
expression |
T2249 |
264-266 |
IN |
denotes |
of |
T2250 |
267-271 |
DT |
denotes |
each |
T2251 |
272-276 |
NN |
denotes |
gene |
T2252 |
277-282 |
IN |
denotes |
among |
T2253 |
283-286 |
DT |
denotes |
the |
T2254 |
287-298 |
NNS |
denotes |
individuals |
T2255 |
298-299 |
. |
denotes |
. |
T2256 |
299-508 |
sentence |
denotes |
Significance level was defined as p < 0.01 following Bonferroni adjustment for multiple comparison, specifically comparison of each of six transcription factors to each of the antioxidant or DNA repair genes. |
T2257 |
300-312 |
NN |
denotes |
Significance |
T2258 |
313-318 |
NN |
denotes |
level |
T2260 |
319-322 |
VBD |
denotes |
was |
T2259 |
323-330 |
VBN |
denotes |
defined |
T2261 |
331-333 |
IN |
denotes |
as |
T2262 |
334-335 |
NN |
denotes |
p |
T2263 |
336-337 |
SYM |
denotes |
< |
T2264 |
338-342 |
CD |
denotes |
0.01 |
T2265 |
343-352 |
VBG |
denotes |
following |
T2266 |
353-363 |
NNP |
denotes |
Bonferroni |
T2267 |
364-374 |
NN |
denotes |
adjustment |
T2268 |
375-378 |
IN |
denotes |
for |
T2269 |
379-387 |
JJ |
denotes |
multiple |
T2270 |
388-398 |
NN |
denotes |
comparison |
T2271 |
398-400 |
, |
denotes |
, |
T2272 |
400-412 |
RB |
denotes |
specifically |
T2273 |
413-423 |
NN |
denotes |
comparison |
T2274 |
424-426 |
IN |
denotes |
of |
T2275 |
427-431 |
DT |
denotes |
each |
T2276 |
432-434 |
IN |
denotes |
of |
T2277 |
435-438 |
CD |
denotes |
six |
T2279 |
439-452 |
NN |
denotes |
transcription |
T2278 |
453-460 |
NNS |
denotes |
factors |
T2280 |
461-463 |
IN |
denotes |
to |
T2281 |
464-468 |
DT |
denotes |
each |
T2282 |
469-471 |
IN |
denotes |
of |
T2283 |
472-475 |
DT |
denotes |
the |
T2285 |
476-487 |
NN |
denotes |
antioxidant |
T2286 |
488-490 |
CC |
denotes |
or |
T2287 |
491-494 |
NN |
denotes |
DNA |
T2288 |
495-501 |
NN |
denotes |
repair |
T2284 |
502-507 |
NNS |
denotes |
genes |
T2289 |
507-508 |
. |
denotes |
. |
T2290 |
508-638 |
sentence |
denotes |
Comparison for significant differences between pairs of correlation coefficients was done by Fisher's Z-transformation test [16]. |
T2291 |
509-519 |
NN |
denotes |
Comparison |
T2293 |
520-523 |
IN |
denotes |
for |
T2294 |
524-535 |
JJ |
denotes |
significant |
T2295 |
536-547 |
NNS |
denotes |
differences |
T2296 |
548-555 |
IN |
denotes |
between |
T2297 |
556-561 |
NNS |
denotes |
pairs |
T2298 |
562-564 |
IN |
denotes |
of |
T2299 |
565-576 |
NN |
denotes |
correlation |
T2300 |
577-589 |
NNS |
denotes |
coefficients |
T2301 |
590-593 |
VBD |
denotes |
was |
T2292 |
594-598 |
VBN |
denotes |
done |
T2302 |
599-601 |
IN |
denotes |
by |
T2303 |
602-608 |
NNP |
denotes |
Fisher |
T2305 |
608-610 |
POS |
denotes |
's |
T2306 |
611-612 |
NN |
denotes |
Z |
T2308 |
612-613 |
HYPH |
denotes |
- |
T2307 |
613-627 |
NN |
denotes |
transformation |
T2304 |
628-632 |
NN |
denotes |
test |
T2309 |
633-634 |
-LRB- |
denotes |
[ |
T2310 |
634-636 |
CD |
denotes |
16 |
T2311 |
636-637 |
-RRB- |
denotes |
] |
T2312 |
637-638 |
. |
denotes |
. |
R1439 |
T2209 |
T2210 |
nsubjpass |
Correlation,determined |
R1440 |
T2211 |
T2209 |
prep |
of,Correlation |
R1441 |
T2212 |
T2211 |
pobj |
each,of |
R1442 |
T2213 |
T2212 |
prep |
of,each |
R1443 |
T2214 |
T2215 |
det |
the,factors |
R1444 |
T2215 |
T2213 |
pobj |
factors,of |
R1445 |
T2216 |
T2215 |
nummod |
six,factors |
R1446 |
T2217 |
T2215 |
compound |
transcription,factors |
R1447 |
T2218 |
T2209 |
prep |
with,Correlation |
R1448 |
T2219 |
T2218 |
pobj |
each,with |
R1449 |
T2220 |
T2219 |
prep |
of,each |
R1450 |
T2221 |
T2222 |
det |
the,genes |
R1451 |
T2222 |
T2220 |
pobj |
genes,of |
R1452 |
T2223 |
T2222 |
nmod |
antioxidant,genes |
R1453 |
T2224 |
T2223 |
cc |
or,antioxidant |
R1454 |
T2225 |
T2226 |
compound |
DNA,repair |
R1455 |
T2226 |
T2223 |
conj |
repair,antioxidant |
R1456 |
T2227 |
T2210 |
auxpass |
was,determined |
R1457 |
T2228 |
T2210 |
prep |
by,determined |
R1458 |
T2229 |
T2230 |
poss |
Pearson,correlation |
R1459 |
T2230 |
T2228 |
pobj |
correlation,by |
R1460 |
T2231 |
T2229 |
case |
's,Pearson |
R1461 |
T2232 |
T2230 |
prep |
following,correlation |
R1462 |
T2233 |
T2234 |
amod |
logarithmic,transformation |
R1463 |
T2234 |
T2232 |
pobj |
transformation,following |
R1464 |
T2235 |
T2210 |
punct |
.,determined |
R1465 |
T2237 |
T2238 |
det |
The,transformation |
R1466 |
T2238 |
T2239 |
nsubj |
transformation,was |
R1467 |
T2240 |
T2239 |
acomp |
necessary,was |
R1468 |
T2241 |
T2239 |
prep |
due,was |
R1469 |
T2242 |
T2241 |
pcomp |
to,due |
R1470 |
T2243 |
T2244 |
det |
the,variation |
R1471 |
T2244 |
T2241 |
pobj |
variation,due |
R1472 |
T2245 |
T2244 |
amod |
wide,variation |
R1473 |
T2246 |
T2244 |
amod |
biological,variation |
R1474 |
T2247 |
T2244 |
prep |
in,variation |
R1475 |
T2248 |
T2247 |
pobj |
expression,in |
R1476 |
T2249 |
T2248 |
prep |
of,expression |
R1477 |
T2250 |
T2251 |
det |
each,gene |
R1478 |
T2251 |
T2249 |
pobj |
gene,of |
R1479 |
T2252 |
T2244 |
prep |
among,variation |
R1480 |
T2253 |
T2254 |
det |
the,individuals |
R1481 |
T2254 |
T2252 |
pobj |
individuals,among |
R1482 |
T2255 |
T2239 |
punct |
.,was |
R1483 |
T2257 |
T2258 |
compound |
Significance,level |
R1484 |
T2258 |
T2259 |
nsubjpass |
level,defined |
R1485 |
T2260 |
T2259 |
auxpass |
was,defined |
R1486 |
T2261 |
T2259 |
prep |
as,defined |
R1487 |
T2262 |
T2261 |
pobj |
p,as |
R1488 |
T2263 |
T2264 |
punct |
<,0.01 |
R1489 |
T2264 |
T2262 |
amod |
0.01,p |
R1490 |
T2265 |
T2259 |
prep |
following,defined |
R1491 |
T2266 |
T2267 |
compound |
Bonferroni,adjustment |
R1492 |
T2267 |
T2265 |
pobj |
adjustment,following |
R1493 |
T2268 |
T2267 |
prep |
for,adjustment |
R1494 |
T2269 |
T2270 |
amod |
multiple,comparison |
R1495 |
T2270 |
T2268 |
pobj |
comparison,for |
R1496 |
T2271 |
T2270 |
punct |
", ",comparison |
R1497 |
T2272 |
T2273 |
advmod |
specifically,comparison |
R1498 |
T2273 |
T2270 |
appos |
comparison,comparison |
R1499 |
T2274 |
T2273 |
prep |
of,comparison |
R1500 |
T2275 |
T2274 |
pobj |
each,of |
R1501 |
T2276 |
T2275 |
prep |
of,each |
R1502 |
T2277 |
T2278 |
nummod |
six,factors |
R1503 |
T2278 |
T2276 |
pobj |
factors,of |
R1504 |
T2279 |
T2278 |
compound |
transcription,factors |
R1505 |
T2280 |
T2273 |
prep |
to,comparison |
R1506 |
T2281 |
T2280 |
pobj |
each,to |
R1507 |
T2282 |
T2281 |
prep |
of,each |
R1508 |
T2283 |
T2284 |
det |
the,genes |
R1509 |
T2284 |
T2282 |
pobj |
genes,of |
R1510 |
T2285 |
T2284 |
nmod |
antioxidant,genes |
R1511 |
T2286 |
T2285 |
cc |
or,antioxidant |
R1512 |
T2287 |
T2288 |
compound |
DNA,repair |
R1513 |
T2288 |
T2285 |
conj |
repair,antioxidant |
R1514 |
T2289 |
T2259 |
punct |
.,defined |
R1515 |
T2291 |
T2292 |
nsubjpass |
Comparison,done |
R1516 |
T2293 |
T2291 |
prep |
for,Comparison |
R1517 |
T2294 |
T2295 |
amod |
significant,differences |
R1518 |
T2295 |
T2293 |
pobj |
differences,for |
R1519 |
T2296 |
T2291 |
prep |
between,Comparison |
R1520 |
T2297 |
T2296 |
pobj |
pairs,between |
R1521 |
T2298 |
T2297 |
prep |
of,pairs |
R1522 |
T2299 |
T2300 |
compound |
correlation,coefficients |
R1523 |
T2300 |
T2298 |
pobj |
coefficients,of |
R1524 |
T2301 |
T2292 |
auxpass |
was,done |
R1525 |
T2302 |
T2292 |
prep |
by,done |
R1526 |
T2303 |
T2304 |
poss |
Fisher,test |
R1527 |
T2304 |
T2302 |
pobj |
test,by |
R1528 |
T2305 |
T2303 |
case |
's,Fisher |
R1529 |
T2306 |
T2307 |
compound |
Z,transformation |
R1530 |
T2307 |
T2304 |
compound |
transformation,test |
R1531 |
T2308 |
T2307 |
punct |
-,transformation |
R1532 |
T2309 |
T2310 |
punct |
[,16 |
R1533 |
T2310 |
T2292 |
parataxis |
16,done |
R1534 |
T2311 |
T2310 |
punct |
],16 |
R1535 |
T2312 |
T2292 |
punct |
.,done |