Id |
Subject |
Object |
Predicate |
Lexical cue |
T5644 |
0-3 |
DT |
denotes |
The |
T5646 |
4-12 |
VBN |
denotes |
observed |
T5647 |
13-25 |
JJ |
denotes |
inter-sample |
T5645 |
26-35 |
NN |
denotes |
variation |
T5649 |
36-38 |
IN |
denotes |
in |
T5650 |
39-42 |
DT |
denotes |
the |
T5651 |
43-51 |
NN |
denotes |
presence |
T5652 |
52-54 |
IN |
denotes |
of |
T5653 |
55-59 |
NN |
denotes |
gene |
T5655 |
59-60 |
HYPH |
denotes |
- |
T5654 |
60-68 |
JJ |
denotes |
specific |
T5656 |
69-79 |
NNS |
denotes |
inhibitors |
T5657 |
80-82 |
IN |
denotes |
of |
T5658 |
83-86 |
NN |
denotes |
PCR |
T5648 |
87-95 |
VBZ |
denotes |
provides |
T5659 |
96-104 |
NN |
denotes |
evidence |
T5660 |
105-115 |
VBG |
denotes |
supporting |
T5661 |
116-119 |
DT |
denotes |
the |
T5662 |
120-124 |
NN |
denotes |
need |
T5663 |
125-128 |
IN |
denotes |
for |
T5664 |
129-138 |
NN |
denotes |
inclusion |
T5665 |
139-141 |
IN |
denotes |
of |
T5666 |
142-144 |
DT |
denotes |
an |
T5668 |
145-153 |
JJ |
denotes |
internal |
T5667 |
154-162 |
NN |
denotes |
standard |
T5669 |
163-165 |
IN |
denotes |
in |
T5670 |
166-170 |
DT |
denotes |
each |
T5672 |
171-183 |
JJ |
denotes |
quantitative |
T5673 |
184-187 |
NN |
denotes |
PCR |
T5674 |
188-198 |
NN |
denotes |
transcript |
T5675 |
199-208 |
NN |
denotes |
abundance |
T5671 |
209-220 |
NN |
denotes |
measurement |
T5676 |
220-221 |
. |
denotes |
. |
T5677 |
221-490 |
sentence |
denotes |
Including such internal standards in the form of standardized mixtures of internal standards improves the reproducibility of transcript abundance measurement and enables development of a standardized database comprising virtually-multiplexed transcript abundance data. |
T5678 |
222-231 |
VBG |
denotes |
Including |
T5680 |
232-236 |
JJ |
denotes |
such |
T5682 |
237-245 |
JJ |
denotes |
internal |
T5681 |
246-255 |
NNS |
denotes |
standards |
T5683 |
256-258 |
IN |
denotes |
in |
T5684 |
259-262 |
DT |
denotes |
the |
T5685 |
263-267 |
NN |
denotes |
form |
T5686 |
268-270 |
IN |
denotes |
of |
T5687 |
271-283 |
JJ |
denotes |
standardized |
T5688 |
284-292 |
NNS |
denotes |
mixtures |
T5689 |
293-295 |
IN |
denotes |
of |
T5690 |
296-304 |
JJ |
denotes |
internal |
T5691 |
305-314 |
NNS |
denotes |
standards |
T5679 |
315-323 |
VBZ |
denotes |
improves |
T5692 |
324-327 |
DT |
denotes |
the |
T5693 |
328-343 |
NN |
denotes |
reproducibility |
T5694 |
344-346 |
IN |
denotes |
of |
T5695 |
347-357 |
NN |
denotes |
transcript |
T5696 |
358-367 |
NN |
denotes |
abundance |
T5697 |
368-379 |
NN |
denotes |
measurement |
T5698 |
380-383 |
CC |
denotes |
and |
T5699 |
384-391 |
VBZ |
denotes |
enables |
T5700 |
392-403 |
NN |
denotes |
development |
T5701 |
404-406 |
IN |
denotes |
of |
T5702 |
407-408 |
DT |
denotes |
a |
T5704 |
409-421 |
VBN |
denotes |
standardized |
T5703 |
422-430 |
NN |
denotes |
database |
T5705 |
431-441 |
VBG |
denotes |
comprising |
T5706 |
442-451 |
RB |
denotes |
virtually |
T5708 |
451-452 |
HYPH |
denotes |
- |
T5707 |
452-463 |
VBN |
denotes |
multiplexed |
T5710 |
464-474 |
NN |
denotes |
transcript |
T5711 |
475-484 |
NN |
denotes |
abundance |
T5709 |
485-489 |
NNS |
denotes |
data |
T5712 |
489-490 |
. |
denotes |
. |
T5713 |
490-633 |
sentence |
denotes |
Virtually-multiplexed transcript abundance data are highly suited to identification of genes that have correlated transcript abundance values. |
T5714 |
491-500 |
RB |
denotes |
Virtually |
T5716 |
500-501 |
HYPH |
denotes |
- |
T5715 |
501-512 |
VBN |
denotes |
multiplexed |
T5718 |
513-523 |
NN |
denotes |
transcript |
T5719 |
524-533 |
NN |
denotes |
abundance |
T5717 |
534-538 |
NNS |
denotes |
data |
T5720 |
539-542 |
VBP |
denotes |
are |
T5721 |
543-549 |
RB |
denotes |
highly |
T5722 |
550-556 |
JJ |
denotes |
suited |
T5723 |
557-559 |
IN |
denotes |
to |
T5724 |
560-574 |
NN |
denotes |
identification |
T5725 |
575-577 |
IN |
denotes |
of |
T5726 |
578-583 |
NNS |
denotes |
genes |
T5727 |
584-588 |
WDT |
denotes |
that |
T5728 |
589-593 |
VBP |
denotes |
have |
T5729 |
594-604 |
VBN |
denotes |
correlated |
T5731 |
605-615 |
NN |
denotes |
transcript |
T5732 |
616-625 |
NN |
denotes |
abundance |
T5730 |
626-632 |
NNS |
denotes |
values |
T5733 |
632-633 |
. |
denotes |
. |
T5734 |
633-763 |
sentence |
denotes |
Correlation at the transcript abundance level is an important property of genes that are co-regulated at the transcription level. |
T5735 |
634-645 |
NN |
denotes |
Correlation |
T5737 |
646-648 |
IN |
denotes |
at |
T5738 |
649-652 |
DT |
denotes |
the |
T5740 |
653-663 |
NN |
denotes |
transcript |
T5741 |
664-673 |
NN |
denotes |
abundance |
T5739 |
674-679 |
NN |
denotes |
level |
T5736 |
680-682 |
VBZ |
denotes |
is |
T5742 |
683-685 |
DT |
denotes |
an |
T5744 |
686-695 |
JJ |
denotes |
important |
T5743 |
696-704 |
NN |
denotes |
property |
T5745 |
705-707 |
IN |
denotes |
of |
T5746 |
708-713 |
NNS |
denotes |
genes |
T5747 |
714-718 |
WDT |
denotes |
that |
T5749 |
719-722 |
VBP |
denotes |
are |
T5748 |
723-735 |
VBN |
denotes |
co-regulated |
T5750 |
736-738 |
IN |
denotes |
at |
T5751 |
739-742 |
DT |
denotes |
the |
T5753 |
743-756 |
NN |
denotes |
transcription |
T5752 |
757-762 |
NN |
denotes |
level |
T5754 |
762-763 |
. |
denotes |
. |
R3646 |
T5706 |
T5707 |
advmod |
virtually,multiplexed |
R3648 |
T5707 |
T5709 |
amod |
multiplexed,data |
R3649 |
T5708 |
T5707 |
punct |
-,multiplexed |
R3651 |
T5709 |
T5705 |
dobj |
data,comprising |
R3652 |
T5710 |
T5711 |
compound |
transcript,abundance |
R3653 |
T5711 |
T5709 |
compound |
abundance,data |
R3654 |
T5712 |
T5679 |
punct |
.,improves |
R3655 |
T5714 |
T5715 |
advmod |
Virtually,multiplexed |
R3657 |
T5715 |
T5717 |
amod |
multiplexed,data |
R3658 |
T5716 |
T5715 |
punct |
-,multiplexed |
R3660 |
T5717 |
T5720 |
nsubj |
data,are |
R3661 |
T5718 |
T5719 |
compound |
transcript,abundance |
R3662 |
T5719 |
T5717 |
compound |
abundance,data |
R3664 |
T5721 |
T5722 |
advmod |
highly,suited |
R3665 |
T5722 |
T5720 |
acomp |
suited,are |
R3667 |
T5723 |
T5722 |
prep |
to,suited |
R3668 |
T5724 |
T5723 |
pobj |
identification,to |
R3669 |
T5725 |
T5724 |
prep |
of,identification |
R3671 |
T5726 |
T5725 |
pobj |
genes,of |
R3672 |
T5727 |
T5728 |
dep |
that,have |
R3673 |
T5728 |
T5726 |
relcl |
have,genes |
R3675 |
T5729 |
T5730 |
amod |
correlated,values |
R3676 |
T5730 |
T5728 |
dobj |
values,have |
R3678 |
T5731 |
T5732 |
compound |
transcript,abundance |
R3679 |
T5732 |
T5730 |
compound |
abundance,values |
R3682 |
T5733 |
T5720 |
punct |
.,are |
R3683 |
T5735 |
T5736 |
nsubj |
Correlation,is |
R3685 |
T5737 |
T5735 |
prep |
at,Correlation |
R3686 |
T5738 |
T5739 |
det |
the,level |
R3688 |
T5739 |
T5737 |
pobj |
level,at |
R3689 |
T5740 |
T5741 |
compound |
transcript,abundance |
R3690 |
T5741 |
T5739 |
compound |
abundance,level |
R3691 |
T5742 |
T5743 |
det |
an,property |
R3693 |
T5743 |
T5736 |
attr |
property,is |
R3695 |
T5744 |
T5743 |
amod |
important,property |
R3696 |
T5745 |
T5743 |
prep |
of,property |
R3697 |
T5746 |
T5745 |
pobj |
genes,of |
R3698 |
T5747 |
T5748 |
dep |
that,co-regulated |
R3700 |
T5748 |
T5746 |
relcl |
co-regulated,genes |
R3701 |
T5749 |
T5748 |
auxpass |
are,co-regulated |
R3703 |
T5750 |
T5748 |
prep |
at,co-regulated |
R3704 |
T5751 |
T5752 |
det |
the,level |
R3705 |
T5752 |
T5750 |
pobj |
level,at |
R3706 |
T5753 |
T5752 |
compound |
transcription,level |
R3707 |
T5754 |
T5736 |
punct |
.,is |
R3719 |
T5644 |
T5645 |
det |
The,variation |
R3720 |
T5645 |
T5648 |
nsubj |
variation,provides |
R3721 |
T5646 |
T5645 |
amod |
observed,variation |
R3722 |
T5647 |
T5645 |
amod |
inter-sample,variation |
R3723 |
T5649 |
T5645 |
prep |
in,variation |
R3724 |
T5650 |
T5651 |
det |
the,presence |
R3725 |
T5651 |
T5649 |
pobj |
presence,in |
R3726 |
T5652 |
T5651 |
prep |
of,presence |
R3727 |
T5653 |
T5654 |
npadvmod |
gene,specific |
R3728 |
T5654 |
T5656 |
amod |
specific,inhibitors |
R3729 |
T5655 |
T5654 |
punct |
-,specific |
R3730 |
T5656 |
T5652 |
pobj |
inhibitors,of |
R3731 |
T5657 |
T5656 |
prep |
of,inhibitors |
R3732 |
T5658 |
T5657 |
pobj |
PCR,of |
R3733 |
T5659 |
T5648 |
dobj |
evidence,provides |
R3734 |
T5660 |
T5659 |
acl |
supporting,evidence |
R3735 |
T5661 |
T5662 |
det |
the,need |
R3736 |
T5662 |
T5660 |
dobj |
need,supporting |
R3737 |
T5663 |
T5662 |
prep |
for,need |
R3738 |
T5664 |
T5663 |
pobj |
inclusion,for |
R3739 |
T5665 |
T5664 |
prep |
of,inclusion |
R3740 |
T5666 |
T5667 |
det |
an,standard |
R3741 |
T5667 |
T5665 |
pobj |
standard,of |
R3742 |
T5668 |
T5667 |
amod |
internal,standard |
R3743 |
T5669 |
T5664 |
prep |
in,inclusion |
R3744 |
T5670 |
T5671 |
det |
each,measurement |
R3745 |
T5671 |
T5669 |
pobj |
measurement,in |
R3746 |
T5672 |
T5671 |
amod |
quantitative,measurement |
R3747 |
T5673 |
T5671 |
compound |
PCR,measurement |
R3748 |
T5674 |
T5675 |
compound |
transcript,abundance |
R3749 |
T5675 |
T5671 |
compound |
abundance,measurement |
R3750 |
T5676 |
T5648 |
punct |
.,provides |
R3751 |
T5678 |
T5679 |
csubj |
Including,improves |
R3752 |
T5680 |
T5681 |
amod |
such,standards |
R3753 |
T5681 |
T5678 |
dobj |
standards,Including |
R3754 |
T5682 |
T5681 |
amod |
internal,standards |
R3755 |
T5683 |
T5678 |
prep |
in,Including |
R3756 |
T5684 |
T5685 |
det |
the,form |
R3757 |
T5685 |
T5683 |
pobj |
form,in |
R3758 |
T5686 |
T5685 |
prep |
of,form |
R3759 |
T5687 |
T5688 |
amod |
standardized,mixtures |
R3760 |
T5688 |
T5686 |
pobj |
mixtures,of |
R3761 |
T5689 |
T5688 |
prep |
of,mixtures |
R3762 |
T5690 |
T5691 |
amod |
internal,standards |
R3763 |
T5691 |
T5689 |
pobj |
standards,of |
R3764 |
T5692 |
T5693 |
det |
the,reproducibility |
R3765 |
T5693 |
T5679 |
dobj |
reproducibility,improves |
R3766 |
T5694 |
T5693 |
prep |
of,reproducibility |
R3767 |
T5695 |
T5696 |
compound |
transcript,abundance |
R3768 |
T5696 |
T5697 |
compound |
abundance,measurement |
R3769 |
T5697 |
T5694 |
pobj |
measurement,of |
R3770 |
T5698 |
T5679 |
cc |
and,improves |
R3771 |
T5699 |
T5679 |
conj |
enables,improves |
R3772 |
T5700 |
T5699 |
dobj |
development,enables |
R3773 |
T5701 |
T5700 |
prep |
of,development |
R3774 |
T5702 |
T5703 |
det |
a,database |
R3775 |
T5703 |
T5701 |
pobj |
database,of |
R3776 |
T5704 |
T5703 |
amod |
standardized,database |
R3777 |
T5705 |
T5703 |
acl |
comprising,database |