PMC:1283364 / 5484-21072 JSONTXT 5 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T1535 9-18 NN denotes Transgene
T1536 19-31 NN denotes Construction
T1537 31-431 sentence denotes We created a tetracycline-responsive chimeric mouse/human APP695Swedish/Indiana (swe/ind) vector by replacing the promoter region of the moPrP.XhoI vector (also known as pPrPpE1/E2,3sal [15]) with the tetracycline-responsive promoter of pTetSplice (Life Technologies, Rockville, Maryland, United States), and then ligating mouse APP with a humanized Aβ domain (mo/huAPP695) cDNA into the new vector.
T1538 32-34 PRP denotes We
T1539 35-42 VBD denotes created
T1540 43-44 DT denotes a
T1542 45-57 NN denotes tetracycline
T1544 57-58 HYPH denotes -
T1543 58-68 JJ denotes responsive
T1545 69-77 JJ denotes chimeric
T1546 78-83 NN denotes mouse
T1547 83-84 HYPH denotes /
T1548 84-89 JJ denotes human
T1549 90-103 NN denotes APP695Swedish
T1551 103-104 HYPH denotes /
T1550 104-111 NNP denotes Indiana
T1552 112-113 -LRB- denotes (
T1553 113-116 NN denotes swe
T1555 116-117 HYPH denotes /
T1554 117-120 NN denotes ind
T1556 120-121 -RRB- denotes )
T1541 122-128 NN denotes vector
T1557 129-131 IN denotes by
T1558 132-141 VBG denotes replacing
T1559 142-145 DT denotes the
T1561 146-154 NN denotes promoter
T1560 155-161 NN denotes region
T1562 162-164 IN denotes of
T1563 165-168 DT denotes the
T1565 169-179 NN denotes moPrP.XhoI
T1564 180-186 NN denotes vector
T1566 187-188 -LRB- denotes (
T1568 188-192 RB denotes also
T1567 193-198 VBN denotes known
T1569 199-201 IN denotes as
T1570 202-209 NN denotes pPrPpE1
T1572 209-210 HYPH denotes /
T1573 210-212 NN denotes E2
T1574 212-213 , denotes ,
T1571 213-217 NN denotes 3sal
T1575 218-219 -LRB- denotes [
T1576 219-221 CD denotes 15
T1577 221-222 -RRB- denotes ]
T1578 222-223 -RRB- denotes )
T1579 224-228 IN denotes with
T1580 229-232 DT denotes the
T1582 233-245 NN denotes tetracycline
T1584 245-246 HYPH denotes -
T1583 246-256 JJ denotes responsive
T1581 257-265 NN denotes promoter
T1585 266-268 IN denotes of
T1586 269-279 NN denotes pTetSplice
T1587 280-281 -LRB- denotes (
T1589 281-285 NNP denotes Life
T1588 286-298 NNP denotes Technologies
T1590 298-300 , denotes ,
T1591 300-309 NNP denotes Rockville
T1592 309-311 , denotes ,
T1593 311-319 NNP denotes Maryland
T1594 319-321 , denotes ,
T1595 321-327 NNP denotes United
T1596 328-334 NNP denotes States
T1597 334-335 -RRB- denotes )
T1598 335-337 , denotes ,
T1599 337-340 CC denotes and
T1600 341-345 RB denotes then
T1601 346-354 VBG denotes ligating
T1602 355-360 NN denotes mouse
T1603 361-364 NN denotes APP
T1604 365-369 IN denotes with
T1605 370-371 DT denotes a
T1607 372-381 JJ denotes humanized
T1608 382-384 NN denotes
T1606 385-391 NN denotes domain
T1610 392-393 -LRB- denotes (
T1611 393-395 NN denotes mo
T1613 395-396 HYPH denotes /
T1612 396-404 NN denotes huAPP695
T1614 404-405 -RRB- denotes )
T1609 406-410 NN denotes cDNA
T1615 411-415 IN denotes into
T1616 416-419 DT denotes the
T1618 420-423 JJ denotes new
T1617 424-430 NN denotes vector
T1619 430-431 . denotes .
T1620 431-801 sentence denotes We began by cloning the tetracycline-responsive promoter (bp 6–481) from pTetSplice by PCR using primers that added external BamHI and NotI sites to the 5′ end and a BamHI site to the 3′ end, while destroying XhoI and BamHI sites within the promoter (forward: GCC GGA TCC GCG GCC GCC GTC GAG TTT ACC ACT CCC TAT C; reverse: GCC GGA TCC ACT CTA GAA GAT CCC CGG GTA CCG).
T1621 432-434 PRP denotes We
T1622 435-440 VBD denotes began
T1623 441-443 IN denotes by
T1624 444-451 VBG denotes cloning
T1625 452-455 DT denotes the
T1627 456-468 NN denotes tetracycline
T1629 468-469 HYPH denotes -
T1628 469-479 JJ denotes responsive
T1626 480-488 NN denotes promoter
T1630 489-490 -LRB- denotes (
T1632 490-492 NN denotes bp
T1631 493-494 CD denotes 6
T1633 494-495 SYM denotes
T1634 495-498 CD denotes 481
T1635 498-499 -RRB- denotes )
T1636 500-504 IN denotes from
T1637 505-515 NN denotes pTetSplice
T1638 516-518 IN denotes by
T1639 519-522 NN denotes PCR
T1640 523-528 VBG denotes using
T1641 529-536 NNS denotes primers
T1642 537-541 WDT denotes that
T1643 542-547 VBD denotes added
T1644 548-556 JJ denotes external
T1646 557-562 NN denotes BamHI
T1647 563-566 CC denotes and
T1648 567-571 NN denotes NotI
T1645 572-577 NNS denotes sites
T1649 578-580 IN denotes to
T1650 581-584 DT denotes the
T1652 585-586 CD denotes 5
T1653 586-587 SYM denotes
T1651 588-591 NN denotes end
T1654 592-595 CC denotes and
T1655 596-597 DT denotes a
T1657 598-603 NN denotes BamHI
T1656 604-608 NN denotes site
T1658 609-611 IN denotes to
T1659 612-615 DT denotes the
T1661 616-617 CD denotes 3
T1662 617-618 SYM denotes
T1660 619-622 NN denotes end
T1663 622-624 , denotes ,
T1664 624-629 IN denotes while
T1665 630-640 VBG denotes destroying
T1666 641-645 NN denotes XhoI
T1668 646-649 CC denotes and
T1669 650-655 NN denotes BamHI
T1667 656-661 NNS denotes sites
T1670 662-668 IN denotes within
T1671 669-672 DT denotes the
T1672 673-681 NN denotes promoter
T1673 682-683 -LRB- denotes (
T1675 683-690 NN denotes forward
T1677 690-692 : denotes :
T1678 692-695 NN denotes GCC
T1679 696-699 NN denotes GGA
T1680 700-703 NN denotes TCC
T1681 704-707 NN denotes GCG
T1682 708-711 NN denotes GCC
T1683 712-715 NN denotes GCC
T1684 716-719 NN denotes GTC
T1685 720-723 NN denotes GAG
T1686 724-727 NN denotes TTT
T1687 728-731 NN denotes ACC
T1688 732-735 NN denotes ACT
T1689 736-739 NN denotes CCC
T1690 740-743 NN denotes TAT
T1676 744-745 NN denotes C
T1691 745-746 : denotes ;
T1692 747-754 NN denotes reverse
T1693 754-756 : denotes :
T1694 756-759 NN denotes GCC
T1695 760-763 NN denotes GGA
T1696 764-767 NN denotes TCC
T1697 768-771 NN denotes ACT
T1698 772-775 NN denotes CTA
T1699 776-779 NN denotes GAA
T1700 780-783 NN denotes GAT
T1701 784-787 NN denotes CCC
T1702 788-791 NN denotes CGG
T1703 792-795 NN denotes GTA
T1674 796-799 NN denotes CCG
T1704 799-800 -RRB- denotes )
T1705 800-801 . denotes .
T1706 801-1067 sentence denotes We then isolated the moPrP.XhoI intron by amplification with primers that added an external BamHI site to the 5′ end of exon 1 and ran through the Asp718 site of exon 2 (forward: GCC GGA TCC GAT CAG CAG ACC GAT TCT GG; reverse: GCC GGT ACC ACT AGG AAG GCA GAA TGC).
T1707 802-804 PRP denotes We
T1709 805-809 RB denotes then
T1708 810-818 VBD denotes isolated
T1710 819-822 DT denotes the
T1712 823-833 NN denotes moPrP.XhoI
T1711 834-840 NN denotes intron
T1713 841-843 IN denotes by
T1714 844-857 NN denotes amplification
T1715 858-862 IN denotes with
T1716 863-870 NNS denotes primers
T1717 871-875 WDT denotes that
T1718 876-881 VBD denotes added
T1719 882-884 DT denotes an
T1721 885-893 JJ denotes external
T1722 894-899 NN denotes BamHI
T1720 900-904 NN denotes site
T1723 905-907 IN denotes to
T1724 908-911 DT denotes the
T1726 912-913 CD denotes 5
T1727 913-914 SYM denotes
T1725 915-918 NN denotes end
T1728 919-921 IN denotes of
T1729 922-926 NN denotes exon
T1730 927-928 CD denotes 1
T1731 929-932 CC denotes and
T1732 933-936 VBD denotes ran
T1733 937-944 IN denotes through
T1734 945-948 DT denotes the
T1736 949-955 NN denotes Asp718
T1735 956-960 NN denotes site
T1737 961-963 IN denotes of
T1738 964-968 NN denotes exon
T1739 969-970 CD denotes 2
T1740 971-972 -LRB- denotes (
T1742 972-979 NN denotes forward
T1744 979-981 : denotes :
T1745 981-984 NN denotes GCC
T1746 985-988 NN denotes GGA
T1747 989-992 NN denotes TCC
T1748 993-996 NN denotes GAT
T1749 997-1000 NN denotes CAG
T1750 1001-1004 NN denotes CAG
T1751 1005-1008 NN denotes ACC
T1752 1009-1012 NN denotes GAT
T1753 1013-1016 NN denotes TCT
T1743 1017-1019 NN denotes GG
T1754 1019-1020 : denotes ;
T1755 1021-1028 NN denotes reverse
T1756 1028-1030 : denotes :
T1757 1030-1033 NN denotes GCC
T1758 1034-1037 NN denotes GGT
T1759 1038-1041 NN denotes ACC
T1760 1042-1045 NN denotes ACT
T1761 1046-1049 NN denotes AGG
T1762 1050-1053 NN denotes AAG
T1763 1054-1057 NN denotes GCA
T1764 1058-1061 NN denotes GAA
T1741 1062-1065 NN denotes TGC
T1765 1065-1066 -RRB- denotes )
T1766 1066-1067 . denotes .
T1767 1067-1418 sentence denotes This 2-kb intron fragment was cloned into a TA cloning vector (Invitrogen, Carlsbad, California, United States), then excised by Asp718 digestion and ligated to the 6.8-kb Asp718 fragment of moPrP.XhoI containing exon 2, exon 3, the 3′ UTR, and pBluescript to generate an intermediate vector with all three exons and a central intron but no promoter.
T1768 1068-1072 DT denotes This
T1770 1073-1074 CD denotes 2
T1772 1074-1075 HYPH denotes -
T1771 1075-1077 NN denotes kb
T1773 1078-1084 NN denotes intron
T1769 1085-1093 NN denotes fragment
T1775 1094-1097 VBD denotes was
T1774 1098-1104 VBN denotes cloned
T1776 1105-1109 IN denotes into
T1777 1110-1111 DT denotes a
T1779 1112-1114 NN denotes TA
T1780 1115-1122 NN denotes cloning
T1778 1123-1129 NN denotes vector
T1781 1130-1131 -LRB- denotes (
T1782 1131-1141 NNP denotes Invitrogen
T1783 1141-1143 , denotes ,
T1784 1143-1151 NNP denotes Carlsbad
T1785 1151-1153 , denotes ,
T1786 1153-1163 NNP denotes California
T1787 1163-1165 , denotes ,
T1788 1165-1171 NNP denotes United
T1789 1172-1178 NNP denotes States
T1790 1178-1179 -RRB- denotes )
T1791 1179-1181 , denotes ,
T1792 1181-1185 RB denotes then
T1793 1186-1193 VBN denotes excised
T1794 1194-1196 IN denotes by
T1795 1197-1203 NN denotes Asp718
T1796 1204-1213 NN denotes digestion
T1797 1214-1217 CC denotes and
T1798 1218-1225 VBN denotes ligated
T1799 1226-1228 IN denotes to
T1800 1229-1232 DT denotes the
T1802 1233-1236 CD denotes 6.8
T1804 1236-1237 HYPH denotes -
T1803 1237-1239 NN denotes kb
T1805 1240-1246 NN denotes Asp718
T1801 1247-1255 NN denotes fragment
T1806 1256-1258 IN denotes of
T1807 1259-1269 NN denotes moPrP.XhoI
T1808 1270-1280 VBG denotes containing
T1809 1281-1285 NN denotes exon
T1810 1286-1287 CD denotes 2
T1811 1287-1289 , denotes ,
T1812 1289-1293 NN denotes exon
T1813 1294-1295 CD denotes 3
T1814 1295-1297 , denotes ,
T1815 1297-1300 DT denotes the
T1817 1301-1302 CD denotes 3
T1818 1302-1303 SYM denotes
T1816 1304-1307 NN denotes UTR
T1819 1307-1309 , denotes ,
T1820 1309-1312 CC denotes and
T1821 1313-1324 NN denotes pBluescript
T1822 1325-1327 TO denotes to
T1823 1328-1336 VB denotes generate
T1824 1337-1339 DT denotes an
T1826 1340-1352 JJ denotes intermediate
T1825 1353-1359 NN denotes vector
T1827 1360-1364 IN denotes with
T1828 1365-1368 DT denotes all
T1830 1369-1374 CD denotes three
T1829 1375-1380 NNS denotes exons
T1831 1381-1384 CC denotes and
T1832 1385-1386 DT denotes a
T1834 1387-1394 JJ denotes central
T1833 1395-1401 NN denotes intron
T1835 1402-1405 CC denotes but
T1836 1406-1408 DT denotes no
T1837 1409-1417 NN denotes promoter
T1838 1417-1418 . denotes .
T1839 1418-1573 sentence denotes This vector was then opened at the BamHI site introduced by the intron cloning primer, and ligated to the 0.5-kb BamHI-cut tetracycline promoter fragment.
T1840 1419-1423 DT denotes This
T1841 1424-1430 NN denotes vector
T1843 1431-1434 VBD denotes was
T1844 1435-1439 RB denotes then
T1842 1440-1446 VBN denotes opened
T1845 1447-1449 IN denotes at
T1846 1450-1453 DT denotes the
T1848 1454-1459 NN denotes BamHI
T1847 1460-1464 NN denotes site
T1849 1465-1475 VBN denotes introduced
T1850 1476-1478 IN denotes by
T1851 1479-1482 DT denotes the
T1853 1483-1489 NN denotes intron
T1854 1490-1497 NN denotes cloning
T1852 1498-1504 NN denotes primer
T1855 1504-1506 , denotes ,
T1856 1506-1509 CC denotes and
T1857 1510-1517 VBN denotes ligated
T1858 1518-1520 IN denotes to
T1859 1521-1524 DT denotes the
T1861 1525-1528 CD denotes 0.5
T1863 1528-1529 HYPH denotes -
T1862 1529-1531 NN denotes kb
T1864 1532-1537 NN denotes BamHI
T1866 1537-1538 HYPH denotes -
T1865 1538-1541 NN denotes cut
T1867 1542-1554 NN denotes tetracycline
T1868 1555-1563 NN denotes promoter
T1860 1564-1572 NN denotes fragment
T1869 1572-1573 . denotes .
T1870 1573-1789 sentence denotes This ligation generated a 9.3-kb vector encoding the tetracycline promoter from pTetSplice with two exons, one intron, and the original 3′ UTR of the moPrP.XhoI vector, all carried in the pBluescript cloning vector.
T1871 1574-1578 DT denotes This
T1872 1579-1587 NN denotes ligation
T1873 1588-1597 VBD denotes generated
T1874 1598-1599 DT denotes a
T1876 1600-1603 CD denotes 9.3
T1878 1603-1604 HYPH denotes -
T1877 1604-1606 NN denotes kb
T1875 1607-1613 NN denotes vector
T1879 1614-1622 VBG denotes encoding
T1880 1623-1626 DT denotes the
T1882 1627-1639 NN denotes tetracycline
T1881 1640-1648 NN denotes promoter
T1883 1649-1653 IN denotes from
T1884 1654-1664 NN denotes pTetSplice
T1885 1665-1669 IN denotes with
T1886 1670-1673 CD denotes two
T1887 1674-1679 NNS denotes exons
T1888 1679-1681 , denotes ,
T1889 1681-1684 CD denotes one
T1890 1685-1691 NN denotes intron
T1891 1691-1693 , denotes ,
T1892 1693-1696 CC denotes and
T1893 1697-1700 DT denotes the
T1895 1701-1709 JJ denotes original
T1896 1710-1711 CD denotes 3
T1897 1711-1712 SYM denotes
T1894 1713-1716 NN denotes UTR
T1898 1717-1719 IN denotes of
T1899 1720-1723 DT denotes the
T1901 1724-1734 NN denotes moPrP.XhoI
T1900 1735-1741 NN denotes vector
T1902 1741-1743 , denotes ,
T1903 1743-1746 RB denotes all
T1904 1747-1754 VBN denotes carried
T1905 1755-1757 IN denotes in
T1906 1758-1761 DT denotes the
T1908 1762-1773 NNP denotes pBluescript
T1909 1774-1781 NN denotes cloning
T1907 1782-1788 NN denotes vector
T1910 1788-1789 . denotes .
T1911 1789-2239 sentence denotes We incorporated the Swedish (KM570/571NL) and Indiana (V617F) mutations into the mo/huAPP695 cDNA (in BS-KS) by PCR using a four-primer strategy: first, two partially overlapping products were generated in separate reactions using primers that encode the desired mutations (Swedish forward: GGA GAT CTC TGA AGT GAA TCT GGA TGC AGA ATT CCG/Indiana reverse: GGG TGA TGA AAA TCA CGG TTG C; Indiana forward: CAA CCG TGA TTT TCA TCA CCC TGG/M13 reverse).
T1912 1790-1792 PRP denotes We
T1913 1793-1805 VBD denotes incorporated
T1915 1806-1809 DT denotes the
T1917 1810-1817 NNP denotes Swedish
T1918 1818-1819 -LRB- denotes (
T1920 1819-1824 NN denotes KM570
T1921 1824-1825 HYPH denotes /
T1919 1825-1830 NN denotes 571NL
T1922 1830-1831 -RRB- denotes )
T1923 1832-1835 CC denotes and
T1924 1836-1843 NNP denotes Indiana
T1925 1844-1845 -LRB- denotes (
T1926 1845-1850 NN denotes V617F
T1927 1850-1851 -RRB- denotes )
T1916 1852-1861 NNS denotes mutations
T1928 1862-1866 IN denotes into
T1929 1867-1870 DT denotes the
T1931 1871-1873 NN denotes mo
T1933 1873-1874 HYPH denotes /
T1932 1874-1882 NN denotes huAPP695
T1930 1883-1887 NN denotes cDNA
T1934 1888-1889 -LRB- denotes (
T1935 1889-1891 IN denotes in
T1936 1892-1894 NN denotes BS
T1938 1894-1895 HYPH denotes -
T1937 1895-1897 NN denotes KS
T1939 1897-1898 -RRB- denotes )
T1940 1899-1901 IN denotes by
T1941 1902-1905 NN denotes PCR
T1942 1906-1911 VBG denotes using
T1943 1912-1913 DT denotes a
T1945 1914-1918 CD denotes four
T1947 1918-1919 HYPH denotes -
T1946 1919-1925 NN denotes primer
T1944 1926-1934 NN denotes strategy
T1948 1934-1936 : denotes :
T1949 1936-1941 RB denotes first
T1950 1941-1943 , denotes ,
T1951 1943-1946 CD denotes two
T1953 1947-1956 RB denotes partially
T1954 1957-1968 VBG denotes overlapping
T1952 1969-1977 NNS denotes products
T1955 1978-1982 VBD denotes were
T1914 1983-1992 VBN denotes generated
T1956 1993-1995 IN denotes in
T1957 1996-2004 JJ denotes separate
T1958 2005-2014 NNS denotes reactions
T1959 2015-2020 VBG denotes using
T1960 2021-2028 NNS denotes primers
T1961 2029-2033 WDT denotes that
T1962 2034-2040 VBP denotes encode
T1963 2041-2044 DT denotes the
T1965 2045-2052 VBN denotes desired
T1964 2053-2062 NNS denotes mutations
T1966 2063-2064 -LRB- denotes (
T1968 2064-2071 NNP denotes Swedish
T1969 2072-2079 NN denotes forward
T1971 2079-2081 : denotes :
T1972 2081-2084 NN denotes GGA
T1973 2085-2088 NN denotes GAT
T1974 2089-2092 NN denotes CTC
T1975 2093-2096 NN denotes TGA
T1976 2097-2100 NN denotes AGT
T1977 2101-2104 NN denotes GAA
T1978 2105-2108 NN denotes TCT
T1979 2109-2112 NNP denotes GGA
T1980 2113-2116 NNP denotes TGC
T1981 2117-2120 NNP denotes AGA
T1982 2121-2124 NNP denotes ATT
T1970 2125-2128 NN denotes CCG
T1984 2128-2129 HYPH denotes /
T1985 2129-2136 NNP denotes Indiana
T1986 2137-2144 NN denotes reverse
T1987 2144-2146 : denotes :
T1988 2146-2149 NN denotes GGG
T1989 2150-2153 NN denotes TGA
T1990 2154-2157 NN denotes TGA
T1991 2158-2161 NN denotes AAA
T1992 2162-2165 NN denotes TCA
T1993 2166-2169 NN denotes CGG
T1994 2170-2173 NN denotes TTG
T1983 2174-2175 NN denotes C
T1995 2175-2176 : denotes ;
T1996 2177-2184 NNP denotes Indiana
T1997 2185-2192 NN denotes forward
T1998 2192-2194 : denotes :
T1999 2194-2197 NN denotes CAA
T2000 2198-2201 NN denotes CCG
T2001 2202-2205 NN denotes TGA
T2002 2206-2209 NN denotes TTT
T2003 2210-2213 NN denotes TCA
T2004 2214-2217 NN denotes TCA
T2005 2218-2221 NN denotes CCC
T2006 2222-2225 NN denotes TGG
T2007 2225-2226 HYPH denotes /
T1967 2226-2229 NN denotes M13
T2008 2230-2237 RB denotes reverse
T2009 2237-2238 -RRB- denotes )
T2010 2238-2239 . denotes .
T2011 2239-2363 sentence denotes The two PCR products were ligated, digested with BglII and ApaI and cloned back into the original mo/huAPP695-BS-KS vector.
T2012 2240-2243 DT denotes The
T2014 2244-2247 CD denotes two
T2015 2248-2251 NN denotes PCR
T2013 2252-2260 NNS denotes products
T2017 2261-2265 VBD denotes were
T2016 2266-2273 VBN denotes ligated
T2018 2273-2275 , denotes ,
T2019 2275-2283 VBN denotes digested
T2020 2284-2288 IN denotes with
T2021 2289-2294 NN denotes BglII
T2022 2295-2298 CC denotes and
T2023 2299-2303 NN denotes ApaI
T2024 2304-2307 CC denotes and
T2025 2308-2314 VBN denotes cloned
T2026 2315-2319 RB denotes back
T2027 2320-2324 IN denotes into
T2028 2325-2328 DT denotes the
T2030 2329-2337 JJ denotes original
T2031 2338-2340 NN denotes mo
T2033 2340-2341 HYPH denotes /
T2034 2341-2349 NN denotes huAPP695
T2035 2349-2350 HYPH denotes -
T2036 2350-2352 NN denotes BS
T2037 2352-2353 HYPH denotes -
T2032 2353-2355 NN denotes KS
T2029 2356-2362 NN denotes vector
T2038 2362-2363 . denotes .
T2039 2363-2490 sentence denotes Finally, the new APP695swe/ind was subcloned into the XhoI site of the moPrP-tetP vector from above to complete the construct.
T2040 2364-2371 RB denotes Finally
T2042 2371-2373 , denotes ,
T2043 2373-2376 DT denotes the
T2045 2377-2380 JJ denotes new
T2046 2381-2390 NN denotes APP695swe
T2047 2390-2391 HYPH denotes /
T2044 2391-2394 NN denotes ind
T2048 2395-2398 VBD denotes was
T2041 2399-2408 VBN denotes subcloned
T2049 2409-2413 IN denotes into
T2050 2414-2417 DT denotes the
T2052 2418-2422 NN denotes XhoI
T2051 2423-2427 NN denotes site
T2053 2428-2430 IN denotes of
T2054 2431-2434 DT denotes the
T2056 2435-2440 NN denotes moPrP
T2058 2440-2441 HYPH denotes -
T2057 2441-2445 NN denotes tetP
T2055 2446-2452 NN denotes vector
T2059 2453-2457 IN denotes from
T2060 2458-2463 RB denotes above
T2061 2464-2466 TO denotes to
T2062 2467-2475 VB denotes complete
T2063 2476-2479 DT denotes the
T2064 2480-2489 NN denotes construct
T2065 2489-2490 . denotes .
T2158 2492-2502 JJ denotes Pronuclear
T2159 2503-2512 NN denotes Injection
T2160 2512-2514 , denotes ,
T2161 2514-2523 NN denotes Screening
T2162 2524-2526 IN denotes of
T2163 2527-2535 NNS denotes Founders
T2164 2535-2537 , denotes ,
T2165 2537-2540 CC denotes and
T2166 2541-2552 NN denotes Maintenance
T2167 2553-2555 IN denotes of
T2168 2556-2559 DT denotes the
T2169 2560-2565 NNS denotes Lines
T2170 2565-2680 sentence denotes The moPrP-tetP-mo/huAPP695swe/ind vector was linearized and the pBluescript domain excised by digestion with NotI.
T2171 2566-2569 DT denotes The
T2173 2570-2575 NN denotes moPrP
T2175 2575-2576 HYPH denotes -
T2176 2576-2580 NN denotes tetP
T2177 2580-2581 HYPH denotes -
T2178 2581-2583 NN denotes mo
T2179 2583-2584 HYPH denotes /
T2180 2584-2595 NN denotes huAPP695swe
T2181 2595-2596 HYPH denotes /
T2174 2596-2599 NN denotes ind
T2172 2600-2606 NN denotes vector
T2183 2607-2610 VBD denotes was
T2182 2611-2621 VBN denotes linearized
T2184 2622-2625 CC denotes and
T2185 2626-2629 DT denotes the
T2187 2630-2641 NNP denotes pBluescript
T2186 2642-2648 NN denotes domain
T2188 2649-2656 VBN denotes excised
T2189 2657-2659 IN denotes by
T2190 2660-2669 NN denotes digestion
T2191 2670-2674 IN denotes with
T2192 2675-2679 NN denotes NotI
T2193 2679-2680 . denotes .
T2194 2680-2786 sentence denotes The purified vector was injected into the pronucleus of fertilized eggs from C57BL/6J × C3HeJ F1 matings.
T2195 2681-2684 DT denotes The
T2197 2685-2693 VBN denotes purified
T2196 2694-2700 NN denotes vector
T2199 2701-2704 VBD denotes was
T2198 2705-2713 VBN denotes injected
T2200 2714-2718 IN denotes into
T2201 2719-2722 DT denotes the
T2202 2723-2733 NN denotes pronucleus
T2203 2734-2736 IN denotes of
T2204 2737-2747 VBN denotes fertilized
T2205 2748-2752 NNS denotes eggs
T2206 2753-2757 IN denotes from
T2207 2758-2763 NN denotes C57BL
T2209 2763-2764 HYPH denotes /
T2210 2764-2766 NN denotes 6J
T2211 2767-2768 SYM denotes ×
T2208 2769-2774 NN denotes C3HeJ
T2213 2775-2777 NN denotes F1
T2212 2778-2785 NNS denotes matings
T2214 2785-2786 . denotes .
T2215 2786-2923 sentence denotes Founder animals were screened for the presence of the transgene by three-way PCR using the S36 and PrP-S/PrP-AS primers described below.
T2216 2787-2794 NN denotes Founder
T2217 2795-2802 NNS denotes animals
T2219 2803-2807 VBD denotes were
T2218 2808-2816 VBN denotes screened
T2220 2817-2820 IN denotes for
T2221 2821-2824 DT denotes the
T2222 2825-2833 NN denotes presence
T2223 2834-2836 IN denotes of
T2224 2837-2840 DT denotes the
T2225 2841-2850 NN denotes transgene
T2226 2851-2853 IN denotes by
T2227 2854-2859 CD denotes three
T2229 2859-2860 HYPH denotes -
T2228 2860-2863 NN denotes way
T2230 2864-2867 NN denotes PCR
T2231 2868-2873 VBG denotes using
T2232 2874-2877 DT denotes the
T2234 2878-2881 NN denotes S36
T2235 2882-2885 CC denotes and
T2236 2886-2889 NN denotes PrP
T2238 2889-2890 HYPH denotes -
T2239 2890-2891 NN denotes S
T2240 2891-2892 HYPH denotes /
T2241 2892-2895 NN denotes PrP
T2242 2895-2896 HYPH denotes -
T2237 2896-2898 NN denotes AS
T2233 2899-2906 NNS denotes primers
T2243 2907-2916 VBN denotes described
T2244 2917-2922 RB denotes below
T2245 2922-2923 . denotes .
T2246 2923-3208 sentence denotes Transgene-positive founders were bred to animals expressing the tetracycline transactivator (tTA) under control of the calcium-calmodulin kinase IIα (CaMKIIα) promoter obtained from Jackson Laboratory [16] (Bar Harbor, Maine, United States; stock # 3010; B6;CBA-TgN[Camk2a-tTA]1Mmay).
T2247 2924-2933 NN denotes Transgene
T2249 2933-2934 HYPH denotes -
T2248 2934-2942 JJ denotes positive
T2250 2943-2951 NNS denotes founders
T2252 2952-2956 VBD denotes were
T2251 2957-2961 VBN denotes bred
T2253 2962-2964 IN denotes to
T2254 2965-2972 NNS denotes animals
T2255 2973-2983 VBG denotes expressing
T2256 2984-2987 DT denotes the
T2258 2988-3000 NN denotes tetracycline
T2257 3001-3015 NN denotes transactivator
T2259 3016-3017 -LRB- denotes (
T2260 3017-3020 NN denotes tTA
T2261 3020-3021 -RRB- denotes )
T2262 3022-3027 IN denotes under
T2263 3028-3035 NN denotes control
T2264 3036-3038 IN denotes of
T2265 3039-3042 DT denotes the
T2267 3043-3050 NN denotes calcium
T2269 3050-3051 HYPH denotes -
T2268 3051-3061 NN denotes calmodulin
T2271 3062-3068 NN denotes kinase
T2270 3069-3072 NN denotes IIα
T2272 3073-3074 -LRB- denotes (
T2273 3074-3081 NN denotes CaMKIIα
T2274 3081-3082 -RRB- denotes )
T2266 3083-3091 NN denotes promoter
T2275 3092-3100 VBN denotes obtained
T2276 3101-3105 IN denotes from
T2277 3106-3113 NNP denotes Jackson
T2278 3114-3124 NNP denotes Laboratory
T2279 3125-3126 -LRB- denotes [
T2280 3126-3128 CD denotes 16
T2281 3128-3129 -RRB- denotes ]
T2282 3130-3131 -LRB- denotes (
T2284 3131-3134 NNP denotes Bar
T2283 3135-3141 NNP denotes Harbor
T2285 3141-3143 , denotes ,
T2286 3143-3148 NNP denotes Maine
T2287 3148-3150 , denotes ,
T2288 3150-3156 NNP denotes United
T2289 3157-3163 NNP denotes States
T2290 3163-3164 : denotes ;
T2291 3165-3170 NN denotes stock
T2293 3171-3172 SYM denotes #
T2294 3173-3177 CD denotes 3010
T2295 3177-3178 : denotes ;
T2296 3179-3181 NN denotes B6
T2297 3181-3182 : denotes ;
T2298 3182-3185 NN denotes CBA
T2299 3185-3186 HYPH denotes -
T2300 3186-3189 NN denotes TgN
T2301 3189-3190 -LRB- denotes [
T2302 3190-3196 NN denotes Camk2a
T2303 3196-3197 HYPH denotes -
T2304 3197-3200 NN denotes tTA
T2305 3200-3201 -RRB- denotes ]
T2292 3201-3206 NN denotes 1Mmay
T2306 3206-3207 -RRB- denotes )
T2307 3207-3208 . denotes .
T2308 3208-3329 sentence denotes The colony was thereafter maintained by crossing single transgenic tTA and APP offspring for each of the four APP lines.
T2309 3209-3212 DT denotes The
T2310 3213-3219 NN denotes colony
T2312 3220-3223 VBD denotes was
T2313 3224-3234 RB denotes thereafter
T2311 3235-3245 VBN denotes maintained
T2314 3246-3248 IN denotes by
T2315 3249-3257 VBG denotes crossing
T2316 3258-3264 JJ denotes single
T2318 3265-3275 JJ denotes transgenic
T2319 3276-3279 NN denotes tTA
T2320 3280-3283 CC denotes and
T2321 3284-3287 NN denotes APP
T2317 3288-3297 NN denotes offspring
T2322 3298-3301 IN denotes for
T2323 3302-3306 DT denotes each
T2324 3307-3309 IN denotes of
T2325 3310-3313 DT denotes the
T2327 3314-3318 CD denotes four
T2328 3319-3322 NN denotes APP
T2326 3323-3328 NNS denotes lines
T2329 3328-3329 . denotes .
T2330 3329-3385 sentence denotes All mice were provided fresh food and water ad libitum.
T2331 3330-3333 DT denotes All
T2332 3334-3338 NNS denotes mice
T2334 3339-3343 VBD denotes were
T2333 3344-3352 VBN denotes provided
T2335 3353-3358 JJ denotes fresh
T2336 3359-3363 NN denotes food
T2337 3364-3367 CC denotes and
T2338 3368-3373 NN denotes water
T2339 3374-3376 FW denotes ad
T2340 3377-3384 FW denotes libitum
T2341 3384-3385 . denotes .
T2342 3385-3542 sentence denotes Animal protocols were approved by both the Johns Hopkins University and the California Institute of Technology Institutional Animal Care and Use Committees.
T2343 3386-3392 NN denotes Animal
T2344 3393-3402 NNS denotes protocols
T2346 3403-3407 VBD denotes were
T2345 3408-3416 VBN denotes approved
T2347 3417-3419 IN denotes by
T2348 3420-3424 DT denotes both
T2350 3425-3428 DT denotes the
T2351 3429-3434 NNP denotes Johns
T2352 3435-3442 NNP denotes Hopkins
T2349 3443-3453 NNP denotes University
T2354 3454-3457 CC denotes and
T2355 3458-3461 DT denotes the
T2357 3462-3472 NNP denotes California
T2356 3473-3482 NNP denotes Institute
T2358 3483-3485 IN denotes of
T2359 3486-3496 NNP denotes Technology
T2360 3497-3510 NNP denotes Institutional
T2361 3511-3517 NNP denotes Animal
T2362 3518-3522 NNP denotes Care
T2363 3523-3526 CC denotes and
T2364 3527-3530 NNP denotes Use
T2353 3531-3541 NNPS denotes Committees
T2365 3541-3542 . denotes .
T2408 3544-3555 NN denotes Doxycycline
T2409 3556-3570 NN denotes Administration
T2410 3570-3706 sentence denotes Doxycycline (dox) was administered through commercially available dox-containing chow (BioServ, Frenchtown, New Jersey, United States).
T2411 3571-3582 NN denotes Doxycycline
T2413 3583-3584 -LRB- denotes (
T2414 3584-3587 NN denotes dox
T2415 3587-3588 -RRB- denotes )
T2416 3589-3592 VBD denotes was
T2412 3593-3605 VBN denotes administered
T2417 3606-3613 IN denotes through
T2418 3614-3626 RB denotes commercially
T2419 3627-3636 JJ denotes available
T2421 3637-3640 NN denotes dox
T2423 3640-3641 HYPH denotes -
T2422 3641-3651 VBG denotes containing
T2420 3652-3656 NN denotes chow
T2424 3657-3658 -LRB- denotes (
T2425 3658-3665 NNP denotes BioServ
T2426 3665-3667 , denotes ,
T2427 3667-3677 NNP denotes Frenchtown
T2428 3677-3679 , denotes ,
T2429 3679-3682 NNP denotes New
T2430 3683-3689 NNP denotes Jersey
T2431 3689-3691 , denotes ,
T2432 3691-3697 NNP denotes United
T2433 3698-3704 NNP denotes States
T2434 3704-3705 -RRB- denotes )
T2435 3705-3706 . denotes .
T2436 3706-3862 sentence denotes The chow contained 200 mg/kg of antibiotic; based on estimated consumption of 5 g per mouse per day, the expected dose to each animal was 1 mg dox per day.
T2437 3707-3710 DT denotes The
T2438 3711-3715 NN denotes chow
T2439 3716-3725 VBD denotes contained
T2441 3726-3729 CD denotes 200
T2442 3730-3732 NN denotes mg
T2443 3732-3733 SYM denotes /
T2444 3733-3735 NN denotes kg
T2445 3736-3738 IN denotes of
T2446 3739-3749 JJ denotes antibiotic
T2447 3749-3750 : denotes ;
T2448 3751-3756 VBN denotes based
T2449 3757-3759 IN denotes on
T2450 3760-3769 VBN denotes estimated
T2451 3770-3781 NN denotes consumption
T2452 3782-3784 IN denotes of
T2453 3785-3786 CD denotes 5
T2454 3787-3788 NN denotes g
T2455 3789-3792 IN denotes per
T2456 3793-3798 NN denotes mouse
T2457 3799-3802 IN denotes per
T2458 3803-3806 NN denotes day
T2459 3806-3808 , denotes ,
T2460 3808-3811 DT denotes the
T2462 3812-3820 VBN denotes expected
T2461 3821-3825 NN denotes dose
T2463 3826-3828 IN denotes to
T2464 3829-3833 DT denotes each
T2465 3834-3840 NN denotes animal
T2440 3841-3844 VBD denotes was
T2466 3845-3846 CD denotes 1
T2467 3847-3849 NN denotes mg
T2468 3850-3853 NN denotes dox
T2469 3854-3857 IN denotes per
T2470 3858-3861 NN denotes day
T2471 3861-3862 . denotes .
T2472 3862-3948 sentence denotes The average 25-g animal therefore received 40 μg of dox per gram body weight per day.
T2473 3863-3866 DT denotes The
T2475 3867-3874 JJ denotes average
T2476 3875-3877 CD denotes 25
T2478 3877-3878 HYPH denotes -
T2477 3878-3879 NN denotes g
T2474 3880-3886 NN denotes animal
T2480 3887-3896 RB denotes therefore
T2479 3897-3905 VBD denotes received
T2481 3906-3908 CD denotes 40
T2482 3909-3911 NN denotes μg
T2483 3912-3914 IN denotes of
T2484 3915-3918 NN denotes dox
T2485 3919-3922 IN denotes per
T2486 3923-3927 NN denotes gram
T2488 3928-3932 NN denotes body
T2487 3933-3939 NN denotes weight
T2489 3940-3943 IN denotes per
T2490 3944-3947 NN denotes day
T2491 3947-3948 . denotes .
T2492 3948-4024 sentence denotes Chow was changed 1–2 times per week to prevent breakdown of the antibiotic.
T2493 3949-3953 NN denotes Chow
T2495 3954-3957 VBD denotes was
T2494 3958-3965 VBN denotes changed
T2496 3966-3967 CD denotes 1
T2498 3967-3968 SYM denotes
T2497 3968-3969 CD denotes 2
T2499 3970-3975 NNS denotes times
T2500 3976-3979 IN denotes per
T2501 3980-3984 NN denotes week
T2502 3985-3987 TO denotes to
T2503 3988-3995 VB denotes prevent
T2504 3996-4005 NN denotes breakdown
T2505 4006-4008 IN denotes of
T2506 4009-4012 DT denotes the
T2507 4013-4023 NN denotes antibiotic
T2508 4023-4024 . denotes .
T2635 4026-4036 NN denotes Genotyping
T2636 4036-4167 sentence denotes Offspring were genotyped for the presence of each transgene by PCR amplification of genomic DNA extracted from a 5-mm tail biopsy.
T2637 4037-4046 NN denotes Offspring
T2639 4047-4051 VBD denotes were
T2638 4052-4061 VBN denotes genotyped
T2640 4062-4065 IN denotes for
T2641 4066-4069 DT denotes the
T2642 4070-4078 NN denotes presence
T2643 4079-4081 IN denotes of
T2644 4082-4086 DT denotes each
T2645 4087-4096 NN denotes transgene
T2646 4097-4099 IN denotes by
T2647 4100-4103 NN denotes PCR
T2648 4104-4117 NN denotes amplification
T2649 4118-4120 IN denotes of
T2650 4121-4128 JJ denotes genomic
T2651 4129-4132 NN denotes DNA
T2652 4133-4142 VBN denotes extracted
T2653 4143-4147 IN denotes from
T2654 4148-4149 DT denotes a
T2656 4150-4151 CD denotes 5
T2658 4151-4152 HYPH denotes -
T2657 4152-4154 NN denotes mm
T2659 4155-4159 NN denotes tail
T2655 4160-4166 NN denotes biopsy
T2660 4166-4167 . denotes .
T2661 4167-4306 sentence denotes Tails were heated to 95 °C for 45 min in 250 μl of 50 mM NaOH, vortexed, then neutralized with an equal volume of 0.5 M Tris-HCl (pH 5.5).
T2662 4168-4173 NNS denotes Tails
T2664 4174-4178 VBD denotes were
T2663 4179-4185 VBN denotes heated
T2665 4186-4188 IN denotes to
T2666 4189-4191 CD denotes 95
T2667 4192-4194 NN denotes °C
T2668 4195-4198 IN denotes for
T2669 4199-4201 CD denotes 45
T2670 4202-4205 NN denotes min
T2671 4206-4208 IN denotes in
T2672 4209-4212 CD denotes 250
T2673 4213-4215 NN denotes μl
T2674 4216-4218 IN denotes of
T2675 4219-4221 CD denotes 50
T2676 4222-4224 NN denotes mM
T2677 4225-4229 NN denotes NaOH
T2678 4229-4231 , denotes ,
T2679 4231-4239 VBN denotes vortexed
T2680 4239-4241 , denotes ,
T2681 4241-4245 RB denotes then
T2682 4246-4257 VBN denotes neutralized
T2683 4258-4262 IN denotes with
T2684 4263-4265 DT denotes an
T2686 4266-4271 JJ denotes equal
T2685 4272-4278 NN denotes volume
T2687 4279-4281 IN denotes of
T2688 4282-4285 CD denotes 0.5
T2689 4286-4287 NN denotes M
T2691 4288-4292 NN denotes Tris
T2692 4292-4293 HYPH denotes -
T2690 4293-4296 NN denotes HCl
T2693 4297-4298 -LRB- denotes (
T2694 4298-4300 NN denotes pH
T2695 4301-4304 CD denotes 5.5
T2696 4304-4305 -RRB- denotes )
T2697 4305-4306 . denotes .
T2698 4306-4399 sentence denotes Debris was sedimented by centrifugation, and 3 μl of supernatant was used for amplification.
T2699 4307-4313 NN denotes Debris
T2701 4314-4317 VBD denotes was
T2700 4318-4328 VBN denotes sedimented
T2702 4329-4331 IN denotes by
T2703 4332-4346 NN denotes centrifugation
T2704 4346-4348 , denotes ,
T2705 4348-4351 CC denotes and
T2706 4352-4353 CD denotes 3
T2707 4354-4356 NN denotes μl
T2709 4357-4359 IN denotes of
T2710 4360-4371 NN denotes supernatant
T2711 4372-4375 VBD denotes was
T2708 4376-4380 VBN denotes used
T2712 4381-4384 IN denotes for
T2713 4385-4398 NN denotes amplification
T2714 4398-4399 . denotes .
T2715 4399-4506 sentence denotes Genotyping for APP and tTA transgenes was performed in the same PCR reaction, using five separate primers.
T2716 4400-4410 VBG denotes Genotyping
T2718 4411-4414 IN denotes for
T2719 4415-4418 NN denotes APP
T2721 4419-4422 CC denotes and
T2722 4423-4426 NN denotes tTA
T2720 4427-4437 NNS denotes transgenes
T2723 4438-4441 VBD denotes was
T2717 4442-4451 VBN denotes performed
T2724 4452-4454 IN denotes in
T2725 4455-4458 DT denotes the
T2727 4459-4463 JJ denotes same
T2728 4464-4467 NN denotes PCR
T2726 4468-4476 NN denotes reaction
T2729 4476-4478 , denotes ,
T2730 4478-4483 VBG denotes using
T2731 4484-4488 CD denotes five
T2733 4489-4497 JJ denotes separate
T2732 4498-4505 NNS denotes primers
T2734 4505-4506 . denotes .
T2735 4506-4723 sentence denotes APP was amplified using forward primer S36 located in the 3′ end of the APP cDNA (CCG AGA TCT CTG AAG TGA AGA TGG ATG) and reverse primer PrP-AS-J located in the 3′ UTR of the vector (CCA AGC CTA GAC CAC GAG AAT GC).
T2736 4507-4510 NN denotes APP
T2738 4511-4514 VBD denotes was
T2737 4515-4524 VBN denotes amplified
T2739 4525-4530 VBG denotes using
T2740 4531-4538 RB denotes forward
T2742 4539-4545 NN denotes primer
T2741 4546-4549 NN denotes S36
T2743 4550-4557 VBN denotes located
T2744 4558-4560 IN denotes in
T2745 4561-4564 DT denotes the
T2747 4565-4566 CD denotes 3
T2748 4566-4567 SYM denotes
T2746 4568-4571 NN denotes end
T2749 4572-4574 IN denotes of
T2750 4575-4578 DT denotes the
T2752 4579-4582 NN denotes APP
T2751 4583-4587 NN denotes cDNA
T2753 4588-4589 -LRB- denotes (
T2755 4589-4592 NN denotes CCG
T2756 4593-4596 NN denotes AGA
T2757 4597-4600 NN denotes TCT
T2758 4601-4604 NN denotes CTG
T2759 4605-4608 NN denotes AAG
T2760 4609-4612 NN denotes TGA
T2761 4613-4616 NN denotes AGA
T2762 4617-4620 NN denotes TGG
T2754 4621-4624 NN denotes ATG
T2763 4624-4625 -RRB- denotes )
T2764 4626-4629 CC denotes and
T2765 4630-4637 JJ denotes reverse
T2767 4638-4644 NN denotes primer
T2768 4645-4648 NN denotes PrP
T2769 4648-4649 HYPH denotes -
T2770 4649-4651 NN denotes AS
T2771 4651-4652 HYPH denotes -
T2766 4652-4653 NN denotes J
T2772 4654-4661 VBN denotes located
T2773 4662-4664 IN denotes in
T2774 4665-4668 DT denotes the
T2776 4669-4670 CD denotes 3
T2777 4670-4671 SYM denotes
T2775 4672-4675 NN denotes UTR
T2778 4676-4678 IN denotes of
T2779 4679-4682 DT denotes the
T2780 4683-4689 NN denotes vector
T2781 4690-4691 -LRB- denotes (
T2783 4691-4694 NN denotes CCA
T2784 4695-4698 NN denotes AGC
T2785 4699-4702 NN denotes CTA
T2786 4703-4706 NN denotes GAC
T2787 4707-4710 NN denotes CAC
T2788 4711-4714 NN denotes GAG
T2789 4715-4718 NN denotes AAT
T2782 4719-4721 NN denotes GC
T2790 4721-4722 -RRB- denotes )
T2791 4722-4723 . denotes .
T2792 4723-4979 sentence denotes The tTA transgene was detected using a primer set that amplified across its two subdomains with tet forward located within the Tn10 tetracycline repressor (CGC TGT GGG GCA TTT TAC TTT AG) and tet reverse within the HSV1 VP16 (CAT GTC CAG ATC GAA ATC GTC).
T2793 4724-4727 DT denotes The
T2795 4728-4731 NN denotes tTA
T2794 4732-4741 NN denotes transgene
T2797 4742-4745 VBD denotes was
T2796 4746-4754 VBN denotes detected
T2798 4755-4760 VBG denotes using
T2799 4761-4762 DT denotes a
T2801 4763-4769 NN denotes primer
T2800 4770-4773 NN denotes set
T2802 4774-4778 WDT denotes that
T2803 4779-4788 VBD denotes amplified
T2804 4789-4795 IN denotes across
T2805 4796-4799 PRP$ denotes its
T2807 4800-4803 CD denotes two
T2806 4804-4814 NNS denotes subdomains
T2808 4815-4819 IN denotes with
T2809 4820-4823 NN denotes tet
T2810 4824-4831 RB denotes forward
T2811 4832-4839 VBN denotes located
T2812 4840-4846 IN denotes within
T2813 4847-4850 DT denotes the
T2815 4851-4855 NN denotes Tn10
T2816 4856-4868 NN denotes tetracycline
T2814 4869-4878 NN denotes repressor
T2817 4879-4880 -LRB- denotes (
T2819 4880-4883 NN denotes CGC
T2820 4884-4887 NN denotes TGT
T2821 4888-4891 NN denotes GGG
T2822 4892-4895 NN denotes GCA
T2823 4896-4899 NN denotes TTT
T2824 4900-4903 NN denotes TAC
T2825 4904-4907 NN denotes TTT
T2818 4908-4910 NN denotes AG
T2826 4910-4911 -RRB- denotes )
T2827 4912-4915 CC denotes and
T2828 4916-4919 NN denotes tet
T2829 4920-4927 JJ denotes reverse
T2830 4928-4934 IN denotes within
T2831 4935-4938 DT denotes the
T2833 4939-4943 NN denotes HSV1
T2832 4944-4948 NN denotes VP16
T2834 4949-4950 -LRB- denotes (
T2836 4950-4953 NN denotes CAT
T2837 4954-4957 NN denotes GTC
T2838 4958-4961 NN denotes CAG
T2839 4962-4965 NN denotes ATC
T2840 4966-4969 NN denotes GAA
T2841 4970-4973 NN denotes ATC
T2835 4974-4977 NN denotes GTC
T2842 4977-4978 -RRB- denotes )
T2843 4978-4979 . denotes .
T2844 4979-5332 sentence denotes All reactions, whether transgene-positive or not, amplified a segment of the endogenous prion protein gene as a control for DNA quality using a forward primer, PrP-S-J, specific to the mouse PrP open reading frame (GGG ACT ATG TGG ACT GAT GTC GG) and a reverse primer, PrP-AS-J, shared by the 3′ UTR of the endogenous PrP gene and the transgene vector.
T2845 4980-4983 DT denotes All
T2846 4984-4993 NNS denotes reactions
T2848 4993-4995 , denotes ,
T2849 4995-5002 IN denotes whether
T2851 5003-5012 NN denotes transgene
T2852 5012-5013 HYPH denotes -
T2850 5013-5021 JJ denotes positive
T2853 5022-5024 CC denotes or
T2854 5025-5028 RB denotes not
T2855 5028-5030 , denotes ,
T2847 5030-5039 VBD denotes amplified
T2856 5040-5041 DT denotes a
T2857 5042-5049 NN denotes segment
T2858 5050-5052 IN denotes of
T2859 5053-5056 DT denotes the
T2861 5057-5067 JJ denotes endogenous
T2862 5068-5073 NN denotes prion
T2863 5074-5081 NN denotes protein
T2860 5082-5086 NN denotes gene
T2864 5087-5089 IN denotes as
T2865 5090-5091 DT denotes a
T2866 5092-5099 NN denotes control
T2867 5100-5103 IN denotes for
T2868 5104-5107 NN denotes DNA
T2869 5108-5115 NN denotes quality
T2870 5116-5121 VBG denotes using
T2871 5122-5123 DT denotes a
T2873 5124-5131 JJ denotes forward
T2872 5132-5138 NN denotes primer
T2874 5138-5140 , denotes ,
T2875 5140-5143 NN denotes PrP
T2877 5143-5144 HYPH denotes -
T2878 5144-5145 NN denotes S
T2879 5145-5146 HYPH denotes -
T2876 5146-5147 NN denotes J
T2880 5147-5149 , denotes ,
T2881 5149-5157 JJ denotes specific
T2882 5158-5160 IN denotes to
T2883 5161-5164 DT denotes the
T2885 5165-5170 NN denotes mouse
T2886 5171-5174 NN denotes PrP
T2887 5175-5179 JJ denotes open
T2888 5180-5187 NN denotes reading
T2884 5188-5193 NN denotes frame
T2889 5194-5195 -LRB- denotes (
T2891 5195-5198 NN denotes GGG
T2892 5199-5202 NN denotes ACT
T2893 5203-5206 NN denotes ATG
T2894 5207-5210 NN denotes TGG
T2895 5211-5214 NN denotes ACT
T2896 5215-5218 NN denotes GAT
T2897 5219-5222 NN denotes GTC
T2890 5223-5225 NN denotes GG
T2898 5225-5226 -RRB- denotes )
T2899 5227-5230 CC denotes and
T2900 5231-5232 DT denotes a
T2902 5233-5240 JJ denotes reverse
T2901 5241-5247 NN denotes primer
T2903 5247-5249 , denotes ,
T2904 5249-5252 NN denotes PrP
T2906 5252-5253 HYPH denotes -
T2907 5253-5255 NN denotes AS
T2908 5255-5256 HYPH denotes -
T2905 5256-5257 NN denotes J
T2909 5257-5259 , denotes ,
T2910 5259-5265 VBN denotes shared
T2911 5266-5268 IN denotes by
T2912 5269-5272 DT denotes the
T2914 5273-5274 CD denotes 3
T2915 5274-5275 SYM denotes
T2913 5276-5279 NN denotes UTR
T2916 5280-5282 IN denotes of
T2917 5283-5286 DT denotes the
T2919 5287-5297 JJ denotes endogenous
T2920 5298-5301 NN denotes PrP
T2918 5302-5306 NN denotes gene
T2921 5307-5310 CC denotes and
T2922 5311-5314 DT denotes the
T2924 5315-5324 NN denotes transgene
T2923 5325-5331 NN denotes vector
T2925 5331-5332 . denotes .
T2926 5332-5436 sentence denotes Amplification reactions were run for 37 cycles at 94 °C for 30 s, 64 °C for 1 min, and 72 °C for 1 min.
T2927 5333-5346 NN denotes Amplification
T2928 5347-5356 NNS denotes reactions
T2930 5357-5361 VBD denotes were
T2929 5362-5365 VBN denotes run
T2931 5366-5369 IN denotes for
T2932 5370-5372 CD denotes 37
T2933 5373-5379 NNS denotes cycles
T2934 5380-5382 IN denotes at
T2935 5383-5385 CD denotes 94
T2936 5386-5388 NN denotes °C
T2937 5389-5392 IN denotes for
T2938 5393-5395 CD denotes 30
T2939 5396-5397 NN denotes s
T2940 5397-5399 , denotes ,
T2941 5399-5401 CD denotes 64
T2942 5402-5404 NN denotes °C
T2943 5405-5408 IN denotes for
T2944 5409-5410 CD denotes 1
T2945 5411-5414 NN denotes min
T2946 5414-5416 , denotes ,
T2947 5416-5419 CC denotes and
T2948 5420-5422 CD denotes 72
T2949 5423-5425 NN denotes °C
T2950 5426-5429 IN denotes for
T2951 5430-5431 CD denotes 1
T2952 5432-5435 NN denotes min
T2953 5435-5436 . denotes .
T2954 5436-5527 sentence denotes All samples, transgenic and wild-type, gave a 750-bp product from the endogenous PrP gene.
T2955 5437-5440 DT denotes All
T2956 5441-5448 NNS denotes samples
T2958 5448-5450 , denotes ,
T2959 5450-5460 JJ denotes transgenic
T2960 5461-5464 CC denotes and
T2961 5465-5469 JJ denotes wild
T2963 5469-5470 HYPH denotes -
T2962 5470-5474 NN denotes type
T2964 5474-5476 , denotes ,
T2957 5476-5480 VBD denotes gave
T2965 5481-5482 DT denotes a
T2967 5483-5486 CD denotes 750
T2969 5486-5487 HYPH denotes -
T2968 5487-5489 NN denotes bp
T2966 5490-5497 NN denotes product
T2970 5498-5502 IN denotes from
T2971 5503-5506 DT denotes the
T2973 5507-5517 JJ denotes endogenous
T2974 5518-5521 NN denotes PrP
T2972 5522-5526 NN denotes gene
T2975 5526-5527 . denotes .
T2976 5527-5626 sentence denotes The APP transgene yielded an additional band at 400 bp; the tTA product fell in between at 480 bp.
T2977 5528-5531 DT denotes The
T2979 5532-5535 NN denotes APP
T2978 5536-5545 NN denotes transgene
T2980 5546-5553 VBD denotes yielded
T2982 5554-5556 DT denotes an
T2984 5557-5567 JJ denotes additional
T2983 5568-5572 NN denotes band
T2985 5573-5575 IN denotes at
T2986 5576-5579 CD denotes 400
T2987 5580-5582 NN denotes bp
T2988 5582-5583 : denotes ;
T2989 5584-5587 DT denotes the
T2991 5588-5591 NN denotes tTA
T2990 5592-5599 NN denotes product
T2981 5600-5604 VBD denotes fell
T2992 5605-5607 RB denotes in
T2993 5608-5615 RB denotes between
T2994 5616-5618 IN denotes at
T2995 5619-5622 CD denotes 480
T2996 5623-5625 NN denotes bp
T2997 5625-5626 . denotes .
T3141 5628-5642 NN denotes Immunoblotting
T3143 5642-5643 HYPH denotes /
T3142 5643-5655 NN denotes Quantitation
T3144 5655-5972 sentence denotes Frozen cortical or whole forebrain tissue was homogenized by sonication in five volumes of phosphate-buffered saline (PBS) with 5 mM EDTA and protease inhibitors (Mammalian cell cocktail, Sigma, St. Louis, Missouri, United States), using a probe sonicator set to 50% output (TEKMAR, Cincinnati, Ohio, United States).
T3145 5656-5662 VBN denotes Frozen
T3147 5663-5671 JJ denotes cortical
T3148 5672-5674 CC denotes or
T3149 5675-5680 JJ denotes whole
T3150 5681-5690 NN denotes forebrain
T3146 5691-5697 NN denotes tissue
T3152 5698-5701 VBD denotes was
T3151 5702-5713 VBN denotes homogenized
T3153 5714-5716 IN denotes by
T3154 5717-5727 NN denotes sonication
T3155 5728-5730 IN denotes in
T3156 5731-5735 CD denotes five
T3157 5736-5743 NNS denotes volumes
T3158 5744-5746 IN denotes of
T3159 5747-5756 NN denotes phosphate
T3161 5756-5757 HYPH denotes -
T3160 5757-5765 VBN denotes buffered
T3162 5766-5772 NN denotes saline
T3163 5773-5774 -LRB- denotes (
T3164 5774-5777 NN denotes PBS
T3165 5777-5778 -RRB- denotes )
T3166 5779-5783 IN denotes with
T3167 5784-5785 CD denotes 5
T3168 5786-5788 NN denotes mM
T3170 5789-5793 NN denotes EDTA
T3171 5794-5797 CC denotes and
T3172 5798-5806 NN denotes protease
T3169 5807-5817 NNS denotes inhibitors
T3173 5818-5819 -LRB- denotes (
T3175 5819-5828 JJ denotes Mammalian
T3176 5829-5833 NN denotes cell
T3174 5834-5842 NN denotes cocktail
T3177 5842-5844 , denotes ,
T3178 5844-5849 NNP denotes Sigma
T3179 5849-5851 , denotes ,
T3180 5851-5854 NNP denotes St.
T3181 5855-5860 NNP denotes Louis
T3182 5860-5862 , denotes ,
T3183 5862-5870 NNP denotes Missouri
T3184 5870-5872 , denotes ,
T3185 5872-5878 NNP denotes United
T3186 5879-5885 NNP denotes States
T3187 5885-5886 -RRB- denotes )
T3188 5886-5888 , denotes ,
T3189 5888-5893 VBG denotes using
T3190 5894-5895 DT denotes a
T3192 5896-5901 NN denotes probe
T3191 5902-5911 NN denotes sonicator
T3193 5912-5915 VBN denotes set
T3194 5916-5918 IN denotes to
T3195 5919-5921 CD denotes 50
T3196 5921-5922 NN denotes %
T3197 5923-5929 NN denotes output
T3198 5930-5931 -LRB- denotes (
T3199 5931-5937 NNP denotes TEKMAR
T3200 5937-5939 , denotes ,
T3201 5939-5949 NNP denotes Cincinnati
T3202 5949-5951 , denotes ,
T3203 5951-5955 NNP denotes Ohio
T3204 5955-5957 , denotes ,
T3205 5957-5963 NNP denotes United
T3206 5964-5970 NNP denotes States
T3207 5970-5971 -RRB- denotes )
T3208 5971-5972 . denotes .
T3209 5972-6116 sentence denotes After dilution with an equal volume of PBS/EDTA/protease inhibitor, the samples were centrifuged briefly and the supernatant used for analysis.
T3210 5973-5978 IN denotes After
T3212 5979-5987 NN denotes dilution
T3213 5988-5992 IN denotes with
T3214 5993-5995 DT denotes an
T3216 5996-6001 JJ denotes equal
T3215 6002-6008 NN denotes volume
T3217 6009-6011 IN denotes of
T3218 6012-6015 NN denotes PBS
T3220 6015-6016 HYPH denotes /
T3221 6016-6020 NN denotes EDTA
T3222 6020-6021 HYPH denotes /
T3219 6021-6029 NN denotes protease
T3223 6030-6039 NN denotes inhibitor
T3224 6039-6041 , denotes ,
T3225 6041-6044 DT denotes the
T3226 6045-6052 NNS denotes samples
T3227 6053-6057 VBD denotes were
T3211 6058-6069 VBN denotes centrifuged
T3228 6070-6077 RB denotes briefly
T3229 6078-6081 CC denotes and
T3230 6082-6085 DT denotes the
T3231 6086-6097 NN denotes supernatant
T3232 6098-6102 VBN denotes used
T3233 6103-6106 IN denotes for
T3234 6107-6115 NN denotes analysis
T3235 6115-6116 . denotes .
T3236 6116-6553 sentence denotes Fifty micrograms (6E10 and CT15) or 5 μg (22C11) of brain homogenate was loaded per lane onto 7.5%, 10%–20%, or 4%–20% Tris-HCl PAGE gels (Bio-Rad Laboratories, Hercules, California, United States) and electrophoresed for several hours in 1× Tris-glycine–sodium dodecyl sulfate (1×TG-SDS) buffer (6E10 and 22C11; Amresco, Solon, Ohio, United States) or 1× Tris-tricine-SDS buffer (CT15; Invitrogen, Carlsbad, California, United States).
T3237 6117-6122 CD denotes Fifty
T3238 6123-6133 NNS denotes micrograms
T3240 6134-6135 -LRB- denotes (
T3239 6135-6139 NN denotes 6E10
T3242 6140-6143 CC denotes and
T3243 6144-6148 NN denotes CT15
T3244 6148-6149 -RRB- denotes )
T3245 6150-6152 CC denotes or
T3246 6153-6154 CD denotes 5
T3247 6155-6157 NN denotes μg
T3249 6158-6159 -LRB- denotes (
T3248 6159-6164 NN denotes 22C11
T3250 6164-6165 -RRB- denotes )
T3251 6166-6168 IN denotes of
T3252 6169-6174 NN denotes brain
T3253 6175-6185 NN denotes homogenate
T3254 6186-6189 VBD denotes was
T3241 6190-6196 VBN denotes loaded
T3255 6197-6200 IN denotes per
T3256 6201-6205 NN denotes lane
T3257 6206-6210 IN denotes onto
T3258 6211-6214 CD denotes 7.5
T3259 6214-6215 NN denotes %
T3261 6215-6217 , denotes ,
T3262 6217-6219 CD denotes 10
T3263 6219-6220 NN denotes %
T3264 6220-6221 SYM denotes
T3266 6221-6223 CD denotes 20
T3265 6223-6224 NN denotes %
T3267 6224-6226 , denotes ,
T3268 6226-6228 CC denotes or
T3269 6229-6230 CD denotes 4
T3270 6230-6231 NN denotes %
T3271 6231-6232 SYM denotes
T3273 6232-6234 CD denotes 20
T3272 6234-6235 NN denotes %
T3274 6236-6240 NN denotes Tris
T3275 6240-6241 HYPH denotes -
T3276 6241-6244 NN denotes HCl
T3260 6245-6249 NN denotes PAGE
T3277 6250-6254 NNS denotes gels
T3278 6255-6256 -LRB- denotes (
T3280 6256-6259 NNP denotes Bio
T3282 6259-6260 HYPH denotes -
T3281 6260-6263 NNP denotes Rad
T3279 6264-6276 NNP denotes Laboratories
T3283 6276-6278 , denotes ,
T3284 6278-6286 NNP denotes Hercules
T3285 6286-6288 , denotes ,
T3286 6288-6298 NNP denotes California
T3287 6298-6300 , denotes ,
T3288 6300-6306 NNP denotes United
T3289 6307-6313 NNP denotes States
T3290 6313-6314 -RRB- denotes )
T3291 6315-6318 CC denotes and
T3292 6319-6334 VBN denotes electrophoresed
T3293 6335-6338 IN denotes for
T3294 6339-6346 JJ denotes several
T3295 6347-6352 NNS denotes hours
T3296 6353-6355 IN denotes in
T3297 6356-6357 CD denotes 1
T3299 6357-6358 SYM denotes ×
T3300 6359-6363 NN denotes Tris
T3301 6363-6364 HYPH denotes -
T3302 6364-6371 NN denotes glycine
T3303 6371-6372 HYPH denotes
T3304 6372-6378 NN denotes sodium
T3305 6379-6386 NN denotes dodecyl
T3298 6387-6394 NN denotes sulfate
T3307 6395-6396 -LRB- denotes (
T3308 6396-6397 CD denotes 1
T3310 6397-6398 SYM denotes ×
T3311 6398-6400 NN denotes TG
T3312 6400-6401 HYPH denotes -
T3309 6401-6404 NN denotes SDS
T3313 6404-6405 -RRB- denotes )
T3306 6406-6412 NN denotes buffer
T3314 6413-6414 -LRB- denotes (
T3316 6414-6418 NN denotes 6E10
T3317 6419-6422 CC denotes and
T3318 6423-6428 NN denotes 22C11
T3319 6428-6429 : denotes ;
T3315 6430-6437 NNP denotes Amresco
T3320 6437-6439 , denotes ,
T3321 6439-6444 NNP denotes Solon
T3322 6444-6446 , denotes ,
T3323 6446-6450 NNP denotes Ohio
T3324 6450-6452 , denotes ,
T3325 6452-6458 NNP denotes United
T3326 6459-6465 NNP denotes States
T3327 6465-6466 -RRB- denotes )
T3328 6467-6469 CC denotes or
T3329 6470-6471 CD denotes 1
T3331 6471-6472 SYM denotes ×
T3332 6473-6477 NN denotes Tris
T3334 6477-6478 HYPH denotes -
T3335 6478-6485 NN denotes tricine
T3336 6485-6486 HYPH denotes -
T3333 6486-6489 NN denotes SDS
T3330 6490-6496 NN denotes buffer
T3337 6497-6498 -LRB- denotes (
T3339 6498-6502 NN denotes CT15
T3340 6502-6503 : denotes ;
T3338 6504-6514 NNP denotes Invitrogen
T3341 6514-6516 , denotes ,
T3342 6516-6524 NNP denotes Carlsbad
T3343 6524-6526 , denotes ,
T3344 6526-6536 NNP denotes California
T3345 6536-6538 , denotes ,
T3346 6538-6544 NNP denotes United
T3347 6545-6551 NNP denotes States
T3348 6551-6552 -RRB- denotes )
T3349 6552-6553 . denotes .
T3350 6553-6713 sentence denotes Proteins were transferred overnight to 0.45-μm Optitran nitrocellulose (Schleicher and Schuell, Keene, New Hampshire, United States) in 1× TG buffer (Amresco).
T3351 6554-6562 NNS denotes Proteins
T3353 6563-6567 VBD denotes were
T3352 6568-6579 VBN denotes transferred
T3354 6580-6589 RB denotes overnight
T3355 6590-6592 IN denotes to
T3356 6593-6597 CD denotes 0.45
T3358 6597-6598 HYPH denotes -
T3357 6598-6600 NN denotes μm
T3360 6601-6609 NNP denotes Optitran
T3359 6610-6624 NN denotes nitrocellulose
T3361 6625-6626 -LRB- denotes (
T3362 6626-6636 NNP denotes Schleicher
T3363 6637-6640 CC denotes and
T3364 6641-6648 NNP denotes Schuell
T3365 6648-6650 , denotes ,
T3366 6650-6655 NNP denotes Keene
T3367 6655-6657 , denotes ,
T3368 6657-6660 NNP denotes New
T3369 6661-6670 NNP denotes Hampshire
T3370 6670-6672 , denotes ,
T3371 6672-6678 NNP denotes United
T3372 6679-6685 NNP denotes States
T3373 6685-6686 -RRB- denotes )
T3374 6687-6689 IN denotes in
T3375 6690-6691 CD denotes 1
T3377 6691-6692 SYM denotes ×
T3378 6693-6695 NN denotes TG
T3376 6696-6702 NN denotes buffer
T3379 6703-6704 -LRB- denotes (
T3380 6704-6711 NNP denotes Amresco
T3381 6711-6712 -RRB- denotes )
T3382 6712-6713 . denotes .
T3383 6713-7238 sentence denotes Blots were blocked in PBS containing 5% nonfat dry milk powder, and incubated for 3 h at room temperature in blocking solution with one of the following antibodies: mouse monoclonal 22C11 (kind gift of Konrad Beyreuther and Andreas Weidemann; [17]) diluted 1:1,000, mouse monoclonal 6E10 (Signet Laboratories, Dedham, Massachusetts, United States) diluted 1:2,500, rabbit polyclonal anti-superoxide dismutase 1 (m/hSOD1) [18] diluted 1:2,500 to 1:4,000, or rabbit polyclonal CT15 (kind gift of Ed Koo; [19]) diluted 1:1,000.
T3384 6714-6719 NNS denotes Blots
T3386 6720-6724 VBD denotes were
T3385 6725-6732 VBN denotes blocked
T3387 6733-6735 IN denotes in
T3388 6736-6739 NN denotes PBS
T3389 6740-6750 VBG denotes containing
T3390 6751-6752 CD denotes 5
T3391 6752-6753 NN denotes %
T3393 6754-6760 JJ denotes nonfat
T3395 6761-6764 JJ denotes dry
T3394 6765-6769 NN denotes milk
T3392 6770-6776 NN denotes powder
T3396 6776-6778 , denotes ,
T3397 6778-6781 CC denotes and
T3398 6782-6791 VBN denotes incubated
T3399 6792-6795 IN denotes for
T3400 6796-6797 CD denotes 3
T3401 6798-6799 NN denotes h
T3402 6800-6802 IN denotes at
T3403 6803-6807 NN denotes room
T3404 6808-6819 NN denotes temperature
T3405 6820-6822 IN denotes in
T3406 6823-6831 NN denotes blocking
T3407 6832-6840 NN denotes solution
T3408 6841-6845 IN denotes with
T3409 6846-6849 CD denotes one
T3410 6850-6852 IN denotes of
T3411 6853-6856 DT denotes the
T3413 6857-6866 VBG denotes following
T3412 6867-6877 NNS denotes antibodies
T3414 6877-6879 : denotes :
T3415 6879-6884 NN denotes mouse
T3417 6885-6895 JJ denotes monoclonal
T3416 6896-6901 NN denotes 22C11
T3418 6902-6903 -LRB- denotes (
T3420 6903-6907 JJ denotes kind
T3421 6908-6912 NN denotes gift
T3422 6913-6915 IN denotes of
T3423 6916-6922 NNP denotes Konrad
T3424 6923-6933 NNP denotes Beyreuther
T3425 6934-6937 CC denotes and
T3426 6938-6945 NNP denotes Andreas
T3427 6946-6955 NNP denotes Weidemann
T3428 6955-6956 : denotes ;
T3429 6957-6958 -LRB- denotes [
T3419 6958-6960 CD denotes 17
T3430 6960-6961 -RRB- denotes ]
T3431 6961-6962 -RRB- denotes )
T3432 6963-6970 VBN denotes diluted
T3433 6971-6972 CD denotes 1
T3434 6972-6973 SYM denotes :
T3435 6973-6978 CD denotes 1,000
T3436 6978-6980 , denotes ,
T3437 6980-6985 NN denotes mouse
T3439 6986-6996 JJ denotes monoclonal
T3438 6997-7001 NN denotes 6E10
T3440 7002-7003 -LRB- denotes (
T3442 7003-7009 NNP denotes Signet
T3441 7010-7022 NNP denotes Laboratories
T3443 7022-7024 , denotes ,
T3444 7024-7030 NNP denotes Dedham
T3445 7030-7032 , denotes ,
T3446 7032-7045 NNP denotes Massachusetts
T3447 7045-7047 , denotes ,
T3448 7047-7053 NNP denotes United
T3449 7054-7060 NNP denotes States
T3450 7060-7061 -RRB- denotes )
T3451 7062-7069 VBN denotes diluted
T3452 7070-7071 CD denotes 1
T3453 7071-7072 SYM denotes :
T3454 7072-7077 CD denotes 2,500
T3455 7077-7079 , denotes ,
T3456 7079-7085 NN denotes rabbit
T3458 7086-7096 JJ denotes polyclonal
T3459 7097-7112 JJ denotes anti-superoxide
T3460 7113-7122 NN denotes dismutase
T3461 7123-7124 CD denotes 1
T3462 7125-7126 -LRB- denotes (
T3463 7126-7127 NN denotes m
T3464 7127-7128 HYPH denotes /
T3457 7128-7133 NN denotes hSOD1
T3465 7133-7134 -RRB- denotes )
T3466 7135-7136 -LRB- denotes [
T3467 7136-7138 CD denotes 18
T3468 7138-7139 -RRB- denotes ]
T3469 7140-7147 VBN denotes diluted
T3470 7148-7149 CD denotes 1
T3471 7149-7150 SYM denotes :
T3472 7150-7155 CD denotes 2,500
T3473 7156-7158 IN denotes to
T3474 7159-7160 CD denotes 1
T3475 7160-7161 SYM denotes :
T3476 7161-7166 CD denotes 4,000
T3477 7166-7168 , denotes ,
T3478 7168-7170 CC denotes or
T3479 7171-7177 NN denotes rabbit
T3481 7178-7188 JJ denotes polyclonal
T3480 7189-7193 NN denotes CT15
T3482 7194-7195 -LRB- denotes (
T3484 7195-7199 JJ denotes kind
T3483 7200-7204 NN denotes gift
T3485 7205-7207 IN denotes of
T3486 7208-7210 NNP denotes Ed
T3487 7211-7214 NNP denotes Koo
T3488 7214-7215 : denotes ;
T3489 7216-7217 -LRB- denotes [
T3490 7217-7219 CD denotes 19
T3491 7219-7220 -RRB- denotes ]
T3492 7220-7221 -RRB- denotes )
T3493 7222-7229 VBN denotes diluted
T3494 7230-7231 CD denotes 1
T3495 7231-7232 SYM denotes :
T3496 7232-7237 CD denotes 1,000
T3497 7237-7238 . denotes .
T3498 7238-7449 sentence denotes Subsequently, the blots were washed with PBS containing 0.1% Tween-20, and then incubated with either goat anti-mouse– or goat anti-rabbit–HRP conjugated secondary antibody diluted 1:1,000 in blocking solution.
T3499 7239-7251 RB denotes Subsequently
T3501 7251-7253 , denotes ,
T3502 7253-7256 DT denotes the
T3503 7257-7262 NNS denotes blots
T3504 7263-7267 VBD denotes were
T3500 7268-7274 VBN denotes washed
T3505 7275-7279 IN denotes with
T3506 7280-7283 NN denotes PBS
T3507 7284-7294 VBG denotes containing
T3508 7295-7298 CD denotes 0.1
T3509 7298-7299 NN denotes %
T3510 7300-7305 NN denotes Tween
T3511 7305-7306 HYPH denotes -
T3512 7306-7308 CD denotes 20
T3513 7308-7310 , denotes ,
T3514 7310-7313 CC denotes and
T3515 7314-7318 RB denotes then
T3516 7319-7328 VBN denotes incubated
T3517 7329-7333 IN denotes with
T3518 7334-7340 CC denotes either
T3519 7341-7345 NN denotes goat
T3521 7346-7356 JJ denotes anti-mouse
T3522 7356-7357 HYPH denotes
T3523 7358-7360 CC denotes or
T3524 7361-7365 NN denotes goat
T3525 7366-7377 JJ denotes anti-rabbit
T3526 7377-7378 HYPH denotes
T3527 7378-7381 NN denotes HRP
T3528 7382-7392 VBN denotes conjugated
T3529 7393-7402 JJ denotes secondary
T3520 7403-7411 NN denotes antibody
T3530 7412-7419 VBN denotes diluted
T3531 7420-7421 CD denotes 1
T3532 7421-7422 SYM denotes :
T3533 7422-7427 CD denotes 1,000
T3534 7428-7430 IN denotes in
T3535 7431-7439 NN denotes blocking
T3536 7440-7448 NN denotes solution
T3537 7448-7449 . denotes .
T3538 7449-7625 sentence denotes After several additional rinses in PBS with 0.1% Tween-20, blots were developed with enhanced chemiluminescence reagent and imaged with the Bio-Rad Molecular Imager FX system.
T3539 7450-7455 IN denotes After
T3541 7456-7463 JJ denotes several
T3543 7464-7474 JJ denotes additional
T3542 7475-7481 NNS denotes rinses
T3544 7482-7484 IN denotes in
T3545 7485-7488 NN denotes PBS
T3546 7489-7493 IN denotes with
T3547 7494-7497 CD denotes 0.1
T3549 7497-7498 NN denotes %
T3548 7499-7504 NN denotes Tween
T3550 7504-7505 HYPH denotes -
T3551 7505-7507 CD denotes 20
T3552 7507-7509 , denotes ,
T3553 7509-7514 NNS denotes blots
T3554 7515-7519 VBD denotes were
T3540 7520-7529 VBN denotes developed
T3555 7530-7534 IN denotes with
T3556 7535-7543 VBN denotes enhanced
T3558 7544-7561 NN denotes chemiluminescence
T3557 7562-7569 NN denotes reagent
T3559 7570-7573 CC denotes and
T3560 7574-7580 VBN denotes imaged
T3561 7581-7585 IN denotes with
T3562 7586-7589 DT denotes the
T3564 7590-7593 NNP denotes Bio
T3566 7593-7594 HYPH denotes -
T3565 7594-7597 NNP denotes Rad
T3568 7598-7607 NNP denotes Molecular
T3569 7608-7614 NNP denotes Imager
T3567 7615-7617 NNP denotes FX
T3563 7618-7624 NN denotes system
T3570 7624-7625 . denotes .
T3571 7625-7768 sentence denotes Staining intensity within each lane was quantified using the Quantity One image analysis software (Molecular Imager FX, Bio-Rad Laboratories).
T3572 7626-7634 NN denotes Staining
T3573 7635-7644 NN denotes intensity
T3575 7645-7651 IN denotes within
T3576 7652-7656 DT denotes each
T3577 7657-7661 NN denotes lane
T3578 7662-7665 VBD denotes was
T3574 7666-7676 VBN denotes quantified
T3579 7677-7682 VBG denotes using
T3580 7683-7686 DT denotes the
T3582 7687-7695 NNP denotes Quantity
T3583 7696-7699 CD denotes One
T3584 7700-7705 NN denotes image
T3585 7706-7714 NN denotes analysis
T3581 7715-7723 NN denotes software
T3586 7724-7725 -LRB- denotes (
T3588 7725-7734 NNP denotes Molecular
T3589 7735-7741 NNP denotes Imager
T3587 7742-7744 NNP denotes FX
T3590 7744-7746 , denotes ,
T3591 7746-7749 NNP denotes Bio
T3593 7749-7750 HYPH denotes -
T3592 7750-7753 NNP denotes Rad
T3594 7754-7766 NNP denotes Laboratories
T3595 7766-7767 -RRB- denotes )
T3596 7767-7768 . denotes .
T3597 7768-7853 sentence denotes Background was calculated from across the image and subtracted from the entire file.
T3598 7769-7779 NN denotes Background
T3600 7780-7783 VBD denotes was
T3599 7784-7794 VBN denotes calculated
T3601 7795-7799 IN denotes from
T3602 7800-7806 IN denotes across
T3603 7807-7810 DT denotes the
T3604 7811-7816 NN denotes image
T3605 7817-7820 CC denotes and
T3606 7821-7831 VBN denotes subtracted
T3607 7832-7836 IN denotes from
T3608 7837-7840 DT denotes the
T3610 7841-7847 JJ denotes entire
T3609 7848-7852 NN denotes file
T3611 7852-7853 . denotes .
T3612 7853-7982 sentence denotes The signal intensity for each band (corrected signal intensity × pixel number) was then calculated using the Volume report tool.
T3613 7854-7857 DT denotes The
T3615 7858-7864 NN denotes signal
T3614 7865-7874 NN denotes intensity
T3617 7875-7878 IN denotes for
T3618 7879-7883 DT denotes each
T3619 7884-7888 NN denotes band
T3620 7889-7890 -LRB- denotes (
T3622 7890-7899 VBN denotes corrected
T3623 7900-7906 NN denotes signal
T3621 7907-7916 NN denotes intensity
T3624 7917-7918 SYM denotes ×
T3625 7919-7924 NN denotes pixel
T3626 7925-7931 NN denotes number
T3627 7931-7932 -RRB- denotes )
T3628 7933-7936 VBD denotes was
T3629 7937-7941 RB denotes then
T3616 7942-7952 VBN denotes calculated
T3630 7953-7958 VBG denotes using
T3631 7959-7962 DT denotes the
T3633 7963-7969 NN denotes Volume
T3634 7970-7976 NN denotes report
T3632 7977-7981 NN denotes tool
T3635 7981-7982 . denotes .
T3710 7984-7988 NN denotes Slot
T3711 7989-7993 NN denotes Blot
T3713 7994-7998 NN denotes mRNA
T3712 7999-8007 NN denotes Analysis
T3714 8007-8199 sentence denotes Five micrograms per sample of total RNA extracted from fresh-frozen brain, liver, kidney, heart, lung, spleen, and skeletal muscle was vacuum-filtered through 0.45-μm Optitran nitrocellulose.
T3715 8008-8012 CD denotes Five
T3716 8013-8023 NNS denotes micrograms
T3718 8024-8027 IN denotes per
T3719 8028-8034 NN denotes sample
T3720 8035-8037 IN denotes of
T3721 8038-8043 JJ denotes total
T3722 8044-8047 NN denotes RNA
T3723 8048-8057 VBN denotes extracted
T3724 8058-8062 IN denotes from
T3725 8063-8068 JJ denotes fresh
T3727 8068-8069 HYPH denotes -
T3726 8069-8075 VBN denotes frozen
T3728 8076-8081 NN denotes brain
T3729 8081-8083 , denotes ,
T3730 8083-8088 NN denotes liver
T3731 8088-8090 , denotes ,
T3732 8090-8096 NN denotes kidney
T3733 8096-8098 , denotes ,
T3734 8098-8103 NN denotes heart
T3735 8103-8105 , denotes ,
T3736 8105-8109 NN denotes lung
T3737 8109-8111 , denotes ,
T3738 8111-8117 NN denotes spleen
T3739 8117-8119 , denotes ,
T3740 8119-8122 CC denotes and
T3741 8123-8131 JJ denotes skeletal
T3742 8132-8138 NN denotes muscle
T3743 8139-8142 VBD denotes was
T3744 8143-8149 NN denotes vacuum
T3745 8149-8150 HYPH denotes -
T3717 8150-8158 VBN denotes filtered
T3746 8159-8166 IN denotes through
T3747 8167-8171 CD denotes 0.45
T3749 8171-8172 HYPH denotes -
T3748 8172-8174 NN denotes μm
T3751 8175-8183 NNP denotes Optitran
T3750 8184-8198 NN denotes nitrocellulose
T3752 8198-8199 . denotes .
T3753 8199-8367 sentence denotes After several washes through the manifold with 10× SSC, blots were UV-cross-linked and probed with a radiolabeled ∼350-bp BglII–XhoI cDNA fragment of mo/huAPP695 cDNA.
T3754 8200-8205 IN denotes After
T3756 8206-8213 JJ denotes several
T3757 8214-8220 NNS denotes washes
T3758 8221-8228 IN denotes through
T3759 8229-8232 DT denotes the
T3760 8233-8241 NN denotes manifold
T3761 8242-8246 IN denotes with
T3762 8247-8249 CD denotes 10
T3764 8249-8250 SYM denotes ×
T3763 8251-8254 NN denotes SSC
T3765 8254-8256 , denotes ,
T3766 8256-8261 NNS denotes blots
T3767 8262-8266 VBD denotes were
T3768 8267-8269 NN denotes UV
T3769 8269-8270 HYPH denotes -
T3755 8270-8282 VBN denotes cross-linked
T3770 8283-8286 CC denotes and
T3771 8287-8293 VBN denotes probed
T3772 8294-8298 IN denotes with
T3773 8299-8300 DT denotes a
T3775 8301-8313 VBN denotes radiolabeled
T3776 8314-8315 SYM denotes
T3777 8315-8318 CD denotes 350
T3779 8318-8319 HYPH denotes -
T3778 8319-8321 NN denotes bp
T3780 8322-8327 NN denotes BglII
T3782 8327-8328 HYPH denotes
T3781 8328-8332 NN denotes XhoI
T3783 8333-8337 NN denotes cDNA
T3774 8338-8346 NN denotes fragment
T3784 8347-8349 IN denotes of
T3785 8350-8352 NN denotes mo
T3787 8352-8353 HYPH denotes /
T3786 8353-8361 NN denotes huAPP695
T3788 8362-8366 NN denotes cDNA
T3789 8366-8367 . denotes .
T3790 8367-8699 sentence denotes After hybridizing overnight at 65 °C in 1% BSA/1 mM EDTA/0.5 M sodium phosphate buffer (pH 7.2)/7% SDS [20], the blots were washed twice at 65 °C for 30 min each in 0.1% BSA/1 mM EDTA/40 mM sodium phosphate buffer (pH 7.2)/5% SDS before two final 30-min washes at 65 °C with 1 mM EDTA/40 mM sodium phosphate buffer (pH 7.2)/1% SDS.
T3791 8368-8373 IN denotes After
T3793 8374-8385 VBG denotes hybridizing
T3794 8386-8395 RB denotes overnight
T3795 8396-8398 IN denotes at
T3796 8399-8401 CD denotes 65
T3797 8402-8404 NN denotes °C
T3798 8405-8407 IN denotes in
T3799 8408-8409 CD denotes 1
T3800 8409-8410 NN denotes %
T3801 8411-8414 NN denotes BSA
T3802 8414-8415 HYPH denotes /
T3803 8415-8416 CD denotes 1
T3804 8417-8419 NN denotes mM
T3805 8420-8424 NN denotes EDTA
T3806 8424-8425 HYPH denotes /
T3807 8425-8428 CD denotes 0.5
T3808 8429-8430 NN denotes M
T3810 8431-8437 NN denotes sodium
T3811 8438-8447 NN denotes phosphate
T3809 8448-8454 NN denotes buffer
T3812 8455-8456 -LRB- denotes (
T3813 8456-8458 NN denotes pH
T3814 8459-8462 CD denotes 7.2
T3815 8462-8463 -RRB- denotes )
T3816 8463-8464 HYPH denotes /
T3817 8464-8465 CD denotes 7
T3818 8465-8466 NN denotes %
T3819 8467-8470 NN denotes SDS
T3820 8471-8472 -LRB- denotes [
T3821 8472-8474 CD denotes 20
T3822 8474-8475 -RRB- denotes ]
T3823 8475-8477 , denotes ,
T3824 8477-8480 DT denotes the
T3825 8481-8486 NNS denotes blots
T3826 8487-8491 VBD denotes were
T3792 8492-8498 VBN denotes washed
T3827 8499-8504 RB denotes twice
T3828 8505-8507 IN denotes at
T3829 8508-8510 CD denotes 65
T3830 8511-8513 NN denotes °C
T3831 8514-8517 IN denotes for
T3832 8518-8520 CD denotes 30
T3833 8521-8524 NN denotes min
T3834 8525-8529 DT denotes each
T3835 8530-8532 IN denotes in
T3836 8533-8536 CD denotes 0.1
T3837 8536-8537 NN denotes %
T3838 8538-8541 NN denotes BSA
T3839 8541-8542 HYPH denotes /
T3840 8542-8543 CD denotes 1
T3841 8544-8546 NN denotes mM
T3842 8547-8551 NN denotes EDTA
T3843 8551-8552 HYPH denotes /
T3844 8552-8554 CD denotes 40
T3845 8555-8557 NN denotes mM
T3847 8558-8564 NN denotes sodium
T3848 8565-8574 NN denotes phosphate
T3846 8575-8581 NN denotes buffer
T3849 8582-8583 -LRB- denotes (
T3850 8583-8585 NN denotes pH
T3851 8586-8589 CD denotes 7.2
T3852 8589-8590 -RRB- denotes )
T3853 8590-8591 HYPH denotes /
T3854 8591-8592 CD denotes 5
T3855 8592-8593 NN denotes %
T3856 8594-8597 NN denotes SDS
T3857 8598-8604 IN denotes before
T3858 8605-8608 CD denotes two
T3860 8609-8614 JJ denotes final
T3861 8615-8617 CD denotes 30
T3863 8617-8618 HYPH denotes -
T3862 8618-8621 NN denotes min
T3859 8622-8628 NNS denotes washes
T3864 8629-8631 IN denotes at
T3865 8632-8634 CD denotes 65
T3866 8635-8637 NN denotes °C
T3867 8638-8642 IN denotes with
T3868 8643-8644 CD denotes 1
T3869 8645-8647 NN denotes mM
T3870 8648-8652 NN denotes EDTA
T3871 8652-8653 HYPH denotes /
T3872 8653-8655 CD denotes 40
T3873 8656-8658 NN denotes mM
T3875 8659-8665 NN denotes sodium
T3876 8666-8675 NN denotes phosphate
T3874 8676-8682 NN denotes buffer
T3877 8683-8684 -LRB- denotes (
T3878 8684-8686 NN denotes pH
T3879 8687-8690 CD denotes 7.2
T3880 8690-8691 -RRB- denotes )
T3881 8691-8692 HYPH denotes /
T3882 8692-8693 CD denotes 1
T3883 8693-8694 NN denotes %
T3884 8695-8698 NN denotes SDS
T3885 8698-8699 . denotes .
T3886 8699-8784 sentence denotes Blots were wrapped wet and exposed to phosphorscreens overnight at room temperature.
T3887 8700-8705 NNS denotes Blots
T3889 8706-8710 VBD denotes were
T3888 8711-8718 VBN denotes wrapped
T3890 8719-8722 JJ denotes wet
T3891 8723-8726 CC denotes and
T3892 8727-8734 VBN denotes exposed
T3893 8735-8737 IN denotes to
T3894 8738-8753 NNS denotes phosphorscreens
T3895 8754-8763 RB denotes overnight
T3896 8764-8766 IN denotes at
T3897 8767-8771 NN denotes room
T3898 8772-8783 NN denotes temperature
T3899 8783-8784 . denotes .
T4137 8786-8793 NN denotes Amyloid
T4138 8794-8803 NN denotes Histology
T4139 8803-8917 sentence denotes Mice were euthanized by ether inhalation and brains removed for immersion fixation in 4% paraformaldehyde/1× PBS.
T4140 8804-8808 NNS denotes Mice
T4142 8809-8813 VBD denotes were
T4141 8814-8824 VBN denotes euthanized
T4143 8825-8827 IN denotes by
T4144 8828-8833 NN denotes ether
T4145 8834-8844 NN denotes inhalation
T4146 8845-8848 CC denotes and
T4147 8849-8855 NNS denotes brains
T4148 8856-8863 VBN denotes removed
T4149 8864-8867 IN denotes for
T4150 8868-8877 NN denotes immersion
T4151 8878-8886 NN denotes fixation
T4152 8887-8889 IN denotes in
T4153 8890-8891 CD denotes 4
T4154 8891-8892 NN denotes %
T4155 8893-8909 NN denotes paraformaldehyde
T4156 8909-8910 HYPH denotes /
T4157 8910-8911 CD denotes 1
T4159 8911-8912 SYM denotes ×
T4158 8913-8916 NN denotes PBS
T4160 8916-8917 . denotes .
T4161 8917-9095 sentence denotes After 48 h in fixative at 4 °C, brains were transferred to PBS, dehydrated in alcohols, treated with cedarwood oil and methylsalicylate, and embedded in paraffin for sectioning.
T4162 8918-8923 IN denotes After
T4164 8924-8926 CD denotes 48
T4165 8927-8928 NN denotes h
T4166 8929-8931 IN denotes in
T4167 8932-8940 JJ denotes fixative
T4168 8941-8943 IN denotes at
T4169 8944-8945 CD denotes 4
T4170 8946-8948 NN denotes °C
T4171 8948-8950 , denotes ,
T4172 8950-8956 NNS denotes brains
T4173 8957-8961 VBD denotes were
T4163 8962-8973 VBN denotes transferred
T4174 8974-8976 IN denotes to
T4175 8977-8980 NN denotes PBS
T4176 8980-8982 , denotes ,
T4177 8982-8992 VBN denotes dehydrated
T4178 8993-8995 IN denotes in
T4179 8996-9004 NNS denotes alcohols
T4180 9004-9006 , denotes ,
T4181 9006-9013 VBN denotes treated
T4182 9014-9018 IN denotes with
T4183 9019-9028 NN denotes cedarwood
T4184 9029-9032 NN denotes oil
T4185 9033-9036 CC denotes and
T4186 9037-9053 NN denotes methylsalicylate
T4187 9053-9055 , denotes ,
T4188 9055-9058 CC denotes and
T4189 9059-9067 VBN denotes embedded
T4190 9068-9070 IN denotes in
T4191 9071-9079 NN denotes paraffin
T4192 9080-9083 IN denotes for
T4193 9084-9094 VBG denotes sectioning
T4194 9094-9095 . denotes .
T4195 9095-9116 sentence denotes Hirano silver stain
T4196 9097-9103 NN denotes Hirano
T4198 9104-9110 NN denotes silver
T4197 9111-9116 NN denotes stain
T4199 9116-9254 sentence denotes Silver impregnation histology was performed on 10-μm paraffin-embedded sections by Hirano's modification of the Bielschowsky method [21].
T4200 9117-9123 NN denotes Silver
T4202 9124-9136 NN denotes impregnation
T4201 9137-9146 NN denotes histology
T4204 9147-9150 VBD denotes was
T4203 9151-9160 VBN denotes performed
T4205 9161-9163 IN denotes on
T4206 9164-9166 CD denotes 10
T4208 9166-9167 HYPH denotes -
T4207 9167-9169 NN denotes μm
T4210 9170-9178 NN denotes paraffin
T4212 9178-9179 HYPH denotes -
T4211 9179-9187 VBN denotes embedded
T4209 9188-9196 NNS denotes sections
T4213 9197-9199 IN denotes by
T4214 9200-9206 NNP denotes Hirano
T4216 9206-9208 POS denotes 's
T4215 9209-9221 NN denotes modification
T4217 9222-9224 IN denotes of
T4218 9225-9228 DT denotes the
T4220 9229-9241 NNP denotes Bielschowsky
T4219 9242-9248 NN denotes method
T4221 9249-9250 -LRB- denotes [
T4222 9250-9252 CD denotes 21
T4223 9252-9253 -RRB- denotes ]
T4224 9253-9254 . denotes .
T4225 9254-9406 sentence denotes Briefly, sections were deparaffinized through xylene and alcohols into tap water before being placed into fresh 20% silver nitrate solution for 20 min.
T4226 9255-9262 RB denotes Briefly
T4228 9262-9264 , denotes ,
T4229 9264-9272 NNS denotes sections
T4230 9273-9277 VBD denotes were
T4227 9278-9292 VBN denotes deparaffinized
T4231 9293-9300 IN denotes through
T4232 9301-9307 NN denotes xylene
T4233 9308-9311 CC denotes and
T4234 9312-9320 NNS denotes alcohols
T4235 9321-9325 IN denotes into
T4236 9326-9329 NN denotes tap
T4237 9330-9335 NN denotes water
T4238 9336-9342 IN denotes before
T4239 9343-9348 VBG denotes being
T4240 9349-9355 VBN denotes placed
T4241 9356-9360 IN denotes into
T4242 9361-9366 JJ denotes fresh
T4244 9367-9369 CD denotes 20
T4245 9369-9370 NN denotes %
T4246 9371-9377 NN denotes silver
T4247 9378-9385 NN denotes nitrate
T4243 9386-9394 NN denotes solution
T4248 9395-9398 IN denotes for
T4249 9399-9401 CD denotes 20
T4250 9402-9405 NN denotes min
T4251 9405-9406 . denotes .
T4252 9406-9550 sentence denotes After being washed thoroughly with distilled water, slides were immersed in 20% silver nitrate solution titrated with fresh ammonium hydroxide.
T4253 9407-9412 IN denotes After
T4255 9413-9418 VBG denotes being
T4256 9419-9425 VBN denotes washed
T4257 9426-9436 RB denotes thoroughly
T4258 9437-9441 IN denotes with
T4259 9442-9451 JJ denotes distilled
T4260 9452-9457 NN denotes water
T4261 9457-9459 , denotes ,
T4262 9459-9465 NNS denotes slides
T4263 9466-9470 VBD denotes were
T4254 9471-9479 VBN denotes immersed
T4264 9480-9482 IN denotes in
T4265 9483-9485 CD denotes 20
T4266 9485-9486 NN denotes %
T4268 9487-9493 NN denotes silver
T4269 9494-9501 NN denotes nitrate
T4267 9502-9510 NN denotes solution
T4270 9511-9519 VBN denotes titrated
T4271 9520-9524 IN denotes with
T4272 9525-9530 JJ denotes fresh
T4274 9531-9539 NN denotes ammonium
T4273 9540-9549 NN denotes hydroxide
T4275 9549-9550 . denotes .
T4276 9550-9831 sentence denotes After 20 min, slides were washed with ammonia water before being individually developed with 100 μl of developer (20 ml of 37% formaldehyde, 100 ml of distilled water, 50 μl of concentrated nitric acid, and 0.5 g of citric acid) added to 50 ml of titrated silver nitrate solution.
T4277 9551-9556 IN denotes After
T4279 9557-9559 CD denotes 20
T4280 9560-9563 NN denotes min
T4281 9563-9565 , denotes ,
T4282 9565-9571 NNS denotes slides
T4283 9572-9576 VBD denotes were
T4278 9577-9583 VBN denotes washed
T4284 9584-9588 IN denotes with
T4285 9589-9596 NN denotes ammonia
T4286 9597-9602 NN denotes water
T4287 9603-9609 IN denotes before
T4288 9610-9615 VBG denotes being
T4290 9616-9628 RB denotes individually
T4289 9629-9638 VBN denotes developed
T4291 9639-9643 IN denotes with
T4292 9644-9647 CD denotes 100
T4293 9648-9650 NN denotes μl
T4294 9651-9653 IN denotes of
T4295 9654-9663 NN denotes developer
T4296 9664-9665 -LRB- denotes (
T4298 9665-9667 CD denotes 20
T4297 9668-9670 NN denotes ml
T4299 9671-9673 IN denotes of
T4300 9674-9676 CD denotes 37
T4301 9676-9677 NN denotes %
T4302 9678-9690 NN denotes formaldehyde
T4303 9690-9692 , denotes ,
T4304 9692-9695 CD denotes 100
T4305 9696-9698 NN denotes ml
T4306 9699-9701 IN denotes of
T4307 9702-9711 JJ denotes distilled
T4308 9712-9717 NN denotes water
T4309 9717-9719 , denotes ,
T4310 9719-9721 CD denotes 50
T4311 9722-9724 NN denotes μl
T4312 9725-9727 IN denotes of
T4313 9728-9740 VBN denotes concentrated
T4315 9741-9747 JJ denotes nitric
T4314 9748-9752 NN denotes acid
T4316 9752-9754 , denotes ,
T4317 9754-9757 CC denotes and
T4318 9758-9761 CD denotes 0.5
T4319 9762-9763 NN denotes g
T4320 9764-9766 IN denotes of
T4321 9767-9773 JJ denotes citric
T4322 9774-9778 NN denotes acid
T4323 9778-9779 -RRB- denotes )
T4324 9780-9785 VBN denotes added
T4325 9786-9788 IN denotes to
T4326 9789-9791 CD denotes 50
T4327 9792-9794 NN denotes ml
T4328 9795-9797 IN denotes of
T4329 9798-9806 VBN denotes titrated
T4331 9807-9813 NN denotes silver
T4332 9814-9821 NN denotes nitrate
T4330 9822-9830 NN denotes solution
T4333 9830-9831 . denotes .
T4334 9831-9945 sentence denotes Slides were then rinsed in tap water, fixed in 5% sodium thiosulfate, and dehydrated through alcohols and xylene.
T4335 9832-9838 NNS denotes Slides
T4337 9839-9843 VBD denotes were
T4338 9844-9848 RB denotes then
T4336 9849-9855 VBN denotes rinsed
T4339 9856-9858 IN denotes in
T4340 9859-9862 NN denotes tap
T4341 9863-9868 NN denotes water
T4342 9868-9870 , denotes ,
T4343 9870-9875 VBN denotes fixed
T4344 9876-9878 IN denotes in
T4345 9879-9880 CD denotes 5
T4346 9880-9881 NN denotes %
T4348 9882-9888 NN denotes sodium
T4347 9889-9900 NN denotes thiosulfate
T4349 9900-9902 , denotes ,
T4350 9902-9905 CC denotes and
T4351 9906-9916 VBN denotes dehydrated
T4352 9917-9924 IN denotes through
T4353 9925-9933 NNS denotes alcohols
T4354 9934-9937 CC denotes and
T4355 9938-9944 NN denotes xylene
T4356 9944-9945 . denotes .
T4357 9945-9968 sentence denotes Thioflavin-S staining
T4358 9947-9957 NN denotes Thioflavin
T4360 9957-9958 HYPH denotes -
T4359 9958-9959 NN denotes S
T4361 9960-9968 NN denotes staining
T4362 9968-10154 sentence denotes Following deparaffinization of sections through xylene and alcohols, amyloid impregnation with thioflavin-S was performed according to the Guntern modification of the standard protocol.
T4363 9969-9978 VBG denotes Following
T4365 9979-9996 NN denotes deparaffinization
T4366 9997-9999 IN denotes of
T4367 10000-10008 NNS denotes sections
T4368 10009-10016 IN denotes through
T4369 10017-10023 NN denotes xylene
T4370 10024-10027 CC denotes and
T4371 10028-10036 NNS denotes alcohols
T4372 10036-10038 , denotes ,
T4373 10038-10045 NN denotes amyloid
T4374 10046-10058 NN denotes impregnation
T4375 10059-10063 IN denotes with
T4376 10064-10074 NN denotes thioflavin
T4378 10074-10075 HYPH denotes -
T4377 10075-10076 NN denotes S
T4379 10077-10080 VBD denotes was
T4364 10081-10090 VBN denotes performed
T4380 10091-10100 VBG denotes according
T4381 10101-10103 IN denotes to
T4382 10104-10107 DT denotes the
T4384 10108-10115 NN denotes Guntern
T4383 10116-10128 NN denotes modification
T4385 10129-10131 IN denotes of
T4386 10132-10135 DT denotes the
T4388 10136-10144 JJ denotes standard
T4387 10145-10153 NN denotes protocol
T4389 10153-10154 . denotes .
T4390 10154-10374 sentence denotes Slides holding 10-μm paraffin sections were washed twice in distilled water, then immersed for 5 min in a 0.25% potassium permanganate solution, followed by 5 min in a 1% potassium metabisulfate/1% oxalic acid solution.
T4391 10155-10161 NNS denotes Slides
T4393 10162-10169 VBG denotes holding
T4394 10170-10172 CD denotes 10
T4396 10172-10173 HYPH denotes -
T4395 10173-10175 NN denotes μm
T4398 10176-10184 NN denotes paraffin
T4397 10185-10193 NNS denotes sections
T4399 10194-10198 VBD denotes were
T4392 10199-10205 VBN denotes washed
T4400 10206-10211 RB denotes twice
T4401 10212-10214 IN denotes in
T4402 10215-10224 JJ denotes distilled
T4403 10225-10230 NN denotes water
T4404 10230-10232 , denotes ,
T4405 10232-10236 RB denotes then
T4406 10237-10245 VBN denotes immersed
T4407 10246-10249 IN denotes for
T4408 10250-10251 CD denotes 5
T4409 10252-10255 NN denotes min
T4410 10256-10258 IN denotes in
T4411 10259-10260 DT denotes a
T4413 10261-10265 CD denotes 0.25
T4414 10265-10266 NN denotes %
T4415 10267-10276 NN denotes potassium
T4416 10277-10289 NN denotes permanganate
T4412 10290-10298 NN denotes solution
T4417 10298-10300 , denotes ,
T4418 10300-10308 VBN denotes followed
T4419 10309-10311 IN denotes by
T4420 10312-10313 CD denotes 5
T4421 10314-10317 NN denotes min
T4422 10318-10320 IN denotes in
T4423 10321-10322 DT denotes a
T4425 10323-10324 CD denotes 1
T4426 10324-10325 NN denotes %
T4428 10326-10335 NN denotes potassium
T4427 10336-10349 NN denotes metabisulfate
T4429 10349-10350 HYPH denotes /
T4430 10350-10351 CD denotes 1
T4431 10351-10352 NN denotes %
T4433 10353-10359 JJ denotes oxalic
T4432 10360-10364 NN denotes acid
T4424 10365-10373 NN denotes solution
T4434 10373-10374 . denotes .
T4435 10374-10526 sentence denotes After this preparation, slides were placed into a filtered aqueous 0.02% thioflavin-S solution (Chroma-Gesellschaft Schmid, Kongen, Germany) for 8 min.
T4436 10375-10380 IN denotes After
T4438 10381-10385 DT denotes this
T4439 10386-10397 NN denotes preparation
T4440 10397-10399 , denotes ,
T4441 10399-10405 NNS denotes slides
T4442 10406-10410 VBD denotes were
T4437 10411-10417 VBN denotes placed
T4443 10418-10422 IN denotes into
T4444 10423-10424 DT denotes a
T4446 10425-10433 VBN denotes filtered
T4447 10434-10441 JJ denotes aqueous
T4448 10442-10446 CD denotes 0.02
T4449 10446-10447 NN denotes %
T4450 10448-10458 NN denotes thioflavin
T4452 10458-10459 HYPH denotes -
T4451 10459-10460 NN denotes S
T4445 10461-10469 NN denotes solution
T4453 10470-10471 -LRB- denotes (
T4455 10471-10477 NNP denotes Chroma
T4457 10477-10478 HYPH denotes -
T4456 10478-10490 NNP denotes Gesellschaft
T4454 10491-10497 NNP denotes Schmid
T4458 10497-10499 , denotes ,
T4459 10499-10505 NNP denotes Kongen
T4460 10505-10507 , denotes ,
T4461 10507-10514 NNP denotes Germany
T4462 10514-10515 -RRB- denotes )
T4463 10516-10519 IN denotes for
T4464 10520-10521 CD denotes 8
T4465 10522-10525 NN denotes min
T4466 10525-10526 . denotes .
T4467 10526-10710 sentence denotes Excess stain was removed by two brief rinses in 80% ethanol, then two in distilled water, after which slides were finished in aqueous mounting medium for florescence photomicrography.
T4468 10527-10533 JJ denotes Excess
T4469 10534-10539 NN denotes stain
T4471 10540-10543 VBD denotes was
T4470 10544-10551 VBN denotes removed
T4472 10552-10554 IN denotes by
T4473 10555-10558 CD denotes two
T4475 10559-10564 JJ denotes brief
T4474 10565-10571 NNS denotes rinses
T4476 10572-10574 IN denotes in
T4477 10575-10577 CD denotes 80
T4478 10577-10578 NN denotes %
T4479 10579-10586 NN denotes ethanol
T4480 10586-10588 , denotes ,
T4481 10588-10592 RB denotes then
T4482 10593-10596 CD denotes two
T4483 10597-10599 IN denotes in
T4484 10600-10609 JJ denotes distilled
T4485 10610-10615 NN denotes water
T4486 10615-10617 , denotes ,
T4487 10617-10622 IN denotes after
T4489 10623-10628 WDT denotes which
T4490 10629-10635 NNS denotes slides
T4491 10636-10640 VBD denotes were
T4488 10641-10649 VBN denotes finished
T4492 10650-10652 IN denotes in
T4493 10653-10660 JJ denotes aqueous
T4495 10661-10669 NN denotes mounting
T4494 10670-10676 NN denotes medium
T4496 10677-10680 IN denotes for
T4497 10681-10692 NN denotes florescence
T4498 10693-10709 NN denotes photomicrography
T4499 10709-10710 . denotes .
T4500 10710-10783 sentence denotes Ubiquitin, glial fibrillary acidic protein, and Aβ immunohistochemistry
T4501 10712-10721 NN denotes Ubiquitin
T4502 10721-10723 , denotes ,
T4503 10723-10728 JJ denotes glial
T4505 10729-10739 JJ denotes fibrillary
T4506 10740-10746 JJ denotes acidic
T4504 10747-10754 NN denotes protein
T4507 10754-10756 , denotes ,
T4508 10756-10759 CC denotes and
T4509 10760-10762 NN denotes
T4510 10763-10783 NN denotes immunohistochemistry
T4511 10783-10884 sentence denotes Prior to immunostaining, slides were deparaffinized by oven heating followed by immersion in xylene.
T4512 10784-10789 JJ denotes Prior
T4513 10790-10792 IN denotes to
T4515 10793-10807 NN denotes immunostaining
T4516 10807-10809 , denotes ,
T4517 10809-10815 NNS denotes slides
T4518 10816-10820 VBD denotes were
T4514 10821-10835 VBN denotes deparaffinized
T4519 10836-10838 IN denotes by
T4520 10839-10843 NN denotes oven
T4521 10844-10851 NN denotes heating
T4522 10852-10860 VBN denotes followed
T4523 10861-10863 IN denotes by
T4524 10864-10873 NN denotes immersion
T4525 10874-10876 IN denotes in
T4526 10877-10883 NN denotes xylene
T4527 10883-10884 . denotes .
T4528 10884-11039 sentence denotes After rehydration through graded alcohols into tap water, endogenous peroxidase activity was quenched by incubation with 3% hydrogen peroxide in methanol.
T4529 10885-10890 IN denotes After
T4531 10891-10902 NN denotes rehydration
T4532 10903-10910 IN denotes through
T4533 10911-10917 VBN denotes graded
T4534 10918-10926 NNS denotes alcohols
T4535 10927-10931 IN denotes into
T4536 10932-10935 NN denotes tap
T4537 10936-10941 NN denotes water
T4538 10941-10943 , denotes ,
T4539 10943-10953 JJ denotes endogenous
T4541 10954-10964 NN denotes peroxidase
T4540 10965-10973 NN denotes activity
T4542 10974-10977 VBD denotes was
T4530 10978-10986 VBN denotes quenched
T4543 10987-10989 IN denotes by
T4544 10990-11000 NN denotes incubation
T4545 11001-11005 IN denotes with
T4546 11006-11007 CD denotes 3
T4547 11007-11008 NN denotes %
T4549 11009-11017 NN denotes hydrogen
T4548 11018-11026 NN denotes peroxide
T4550 11027-11029 IN denotes in
T4551 11030-11038 NN denotes methanol
T4552 11038-11039 . denotes .
T4553 11039-11122 sentence denotes Slides were microwaved for 5–7 min in water, cooled for 5 min, then washed in TBS.
T4554 11040-11046 NNS denotes Slides
T4556 11047-11051 VBD denotes were
T4555 11052-11062 VBN denotes microwaved
T4557 11063-11066 IN denotes for
T4558 11067-11068 CD denotes 5
T4560 11068-11069 SYM denotes
T4559 11069-11070 CD denotes 7
T4561 11071-11074 NN denotes min
T4562 11075-11077 IN denotes in
T4563 11078-11083 NN denotes water
T4564 11083-11085 , denotes ,
T4565 11085-11091 VBN denotes cooled
T4566 11092-11095 IN denotes for
T4567 11096-11097 CD denotes 5
T4568 11098-11101 NN denotes min
T4569 11101-11103 , denotes ,
T4570 11103-11107 RB denotes then
T4571 11108-11114 VBN denotes washed
T4572 11115-11117 IN denotes in
T4573 11118-11121 NN denotes TBS
T4574 11121-11122 . denotes .
T4575 11122-11219 sentence denotes Nonspecific staining was blocked for 1 h with 3% normal goat serum and 0.1% Triton-X 100 in TBS.
T4576 11123-11134 JJ denotes Nonspecific
T4577 11135-11143 NN denotes staining
T4579 11144-11147 VBD denotes was
T4578 11148-11155 VBN denotes blocked
T4580 11156-11159 IN denotes for
T4581 11160-11161 CD denotes 1
T4582 11162-11163 NN denotes h
T4583 11164-11168 IN denotes with
T4584 11169-11170 CD denotes 3
T4585 11170-11171 NN denotes %
T4587 11172-11178 JJ denotes normal
T4588 11179-11183 NN denotes goat
T4586 11184-11189 NN denotes serum
T4589 11190-11193 CC denotes and
T4590 11194-11197 CD denotes 0.1
T4591 11197-11198 NN denotes %
T4593 11199-11205 NN denotes Triton
T4594 11205-11206 HYPH denotes -
T4592 11206-11207 NN denotes X
T4595 11208-11211 CD denotes 100
T4596 11212-11214 IN denotes in
T4597 11215-11218 NN denotes TBS
T4598 11218-11219 . denotes .
T4599 11219-11616 sentence denotes Slides were then placed into primary antibody (rabbit anti-Aβ peptide polyclonal antibody, Zymed Laboratories, South San Francisco, California, United States; rabbit anti-ubiquitin and rabbit anti–glial fibrillary acidic protein (GFAP) polyclonal antibodies, Dako, Carpinteria, California, United States) diluted 1:500 in TBS with 2% normal goat serum and incubated overnight at room temperature.
T4600 11220-11226 NNS denotes Slides
T4602 11227-11231 VBD denotes were
T4603 11232-11236 RB denotes then
T4601 11237-11243 VBN denotes placed
T4604 11244-11248 IN denotes into
T4605 11249-11256 JJ denotes primary
T4606 11257-11265 NN denotes antibody
T4607 11266-11267 -LRB- denotes (
T4609 11267-11273 NN denotes rabbit
T4611 11274-11281 JJ denotes anti-Aβ
T4612 11282-11289 NN denotes peptide
T4613 11290-11300 JJ denotes polyclonal
T4610 11301-11309 NN denotes antibody
T4614 11309-11311 , denotes ,
T4615 11311-11316 NNP denotes Zymed
T4616 11317-11329 NNP denotes Laboratories
T4617 11329-11331 , denotes ,
T4618 11331-11336 NNP denotes South
T4620 11337-11340 NNP denotes San
T4619 11341-11350 NNP denotes Francisco
T4621 11350-11352 , denotes ,
T4622 11352-11362 NNP denotes California
T4623 11362-11364 , denotes ,
T4624 11364-11370 NNP denotes United
T4625 11371-11377 NNP denotes States
T4626 11377-11378 : denotes ;
T4627 11379-11385 NN denotes rabbit
T4628 11386-11400 JJ denotes anti-ubiquitin
T4629 11401-11404 CC denotes and
T4630 11405-11411 NN denotes rabbit
T4631 11412-11422 JJ denotes anti–glial
T4632 11423-11433 JJ denotes fibrillary
T4634 11434-11440 JJ denotes acidic
T4633 11441-11448 NN denotes protein
T4635 11449-11450 -LRB- denotes (
T4636 11450-11454 NN denotes GFAP
T4637 11454-11455 -RRB- denotes )
T4638 11456-11466 JJ denotes polyclonal
T4608 11467-11477 NNS denotes antibodies
T4639 11477-11479 , denotes ,
T4640 11479-11483 NNP denotes Dako
T4641 11483-11485 , denotes ,
T4642 11485-11496 NNP denotes Carpinteria
T4643 11496-11498 , denotes ,
T4644 11498-11508 NNP denotes California
T4645 11508-11510 , denotes ,
T4646 11510-11516 NNP denotes United
T4647 11517-11523 NNP denotes States
T4648 11523-11524 -RRB- denotes )
T4649 11525-11532 VBN denotes diluted
T4650 11533-11534 CD denotes 1
T4651 11534-11535 SYM denotes :
T4652 11535-11538 CD denotes 500
T4653 11539-11541 IN denotes in
T4654 11542-11545 NN denotes TBS
T4655 11546-11550 IN denotes with
T4656 11551-11552 CD denotes 2
T4657 11552-11553 NN denotes %
T4659 11554-11560 JJ denotes normal
T4660 11561-11565 NN denotes goat
T4658 11566-11571 NN denotes serum
T4661 11572-11575 CC denotes and
T4662 11576-11585 VBN denotes incubated
T4663 11586-11595 RB denotes overnight
T4664 11596-11598 IN denotes at
T4665 11599-11603 NN denotes room
T4666 11604-11615 NN denotes temperature
T4667 11615-11616 . denotes .
T4668 11616-12023 sentence denotes After being washed of excess primary antibody with several changes of TBS, slides were incubated with either the Vectastain Elite anti-rabbit secondary system (anti-Aβ; Vector Laboratories, Burlingame, California, United States) or peroxidase/anti-peroxidase reagents (anti-ubitquitin and anti-GFAP; Sternberger Monoclonals, Lutherville, Maryland, United States) according to the manufacturers' directions.
T4669 11617-11622 IN denotes After
T4671 11623-11628 VBG denotes being
T4672 11629-11635 VBN denotes washed
T4673 11636-11638 IN denotes of
T4674 11639-11645 JJ denotes excess
T4676 11646-11653 JJ denotes primary
T4675 11654-11662 NN denotes antibody
T4677 11663-11667 IN denotes with
T4678 11668-11675 JJ denotes several
T4679 11676-11683 NNS denotes changes
T4680 11684-11686 IN denotes of
T4681 11687-11690 NN denotes TBS
T4682 11690-11692 , denotes ,
T4683 11692-11698 NNS denotes slides
T4684 11699-11703 VBD denotes were
T4670 11704-11713 VBN denotes incubated
T4685 11714-11718 IN denotes with
T4686 11719-11725 CC denotes either
T4688 11726-11729 DT denotes the
T4689 11730-11740 NNP denotes Vectastain
T4690 11741-11746 NNP denotes Elite
T4691 11747-11758 JJ denotes anti-rabbit
T4692 11759-11768 JJ denotes secondary
T4687 11769-11775 NN denotes system
T4693 11776-11777 -LRB- denotes (
T4695 11777-11784 JJ denotes anti-Aβ
T4696 11784-11785 : denotes ;
T4697 11786-11792 NNP denotes Vector
T4694 11793-11805 NNP denotes Laboratories
T4698 11805-11807 , denotes ,
T4699 11807-11817 NNP denotes Burlingame
T4700 11817-11819 , denotes ,
T4701 11819-11829 NNP denotes California
T4702 11829-11831 , denotes ,
T4703 11831-11837 NNP denotes United
T4704 11838-11844 NNP denotes States
T4705 11844-11845 -RRB- denotes )
T4706 11846-11848 CC denotes or
T4707 11849-11859 NN denotes peroxidase
T4709 11859-11860 HYPH denotes /
T4710 11860-11875 JJ denotes anti-peroxidase
T4708 11876-11884 NNS denotes reagents
T4711 11885-11886 -LRB- denotes (
T4713 11886-11901 JJ denotes anti-ubitquitin
T4714 11902-11905 CC denotes and
T4715 11906-11915 JJ denotes anti-GFAP
T4716 11915-11916 : denotes ;
T4717 11917-11928 NNP denotes Sternberger
T4712 11929-11940 NNPS denotes Monoclonals
T4718 11940-11942 , denotes ,
T4719 11942-11953 NNP denotes Lutherville
T4720 11953-11955 , denotes ,
T4721 11955-11963 NNP denotes Maryland
T4722 11963-11965 , denotes ,
T4723 11965-11971 NNP denotes United
T4724 11972-11978 NNP denotes States
T4725 11978-11979 -RRB- denotes )
T4726 11980-11989 VBG denotes according
T4727 11990-11992 IN denotes to
T4728 11993-11996 DT denotes the
T4729 11997-12010 NNS denotes manufacturers
T4731 12010-12011 POS denotes '
T4730 12012-12022 NNS denotes directions
T4732 12022-12023 . denotes .
T4733 12023-12129 sentence denotes Antibody binding was visualized with diaminobenzidene, and sections were counterstained with hematoxylin.
T4734 12024-12032 NN denotes Antibody
T4735 12033-12040 NN denotes binding
T4737 12041-12044 VBD denotes was
T4736 12045-12055 VBN denotes visualized
T4738 12056-12060 IN denotes with
T4739 12061-12077 NN denotes diaminobenzidene
T4740 12077-12079 , denotes ,
T4741 12079-12082 CC denotes and
T4742 12083-12091 NNS denotes sections
T4744 12092-12096 VBD denotes were
T4743 12097-12111 VBN denotes counterstained
T4745 12112-12116 IN denotes with
T4746 12117-12128 NN denotes hematoxylin
T4747 12128-12129 . denotes .
T4787 12131-12137 NN denotes Filter
T4789 12138-12142 NN denotes Trap
T4788 12143-12148 NN denotes Assay
T4790 12148-12300 sentence denotes An aliquot of each cortical homogenate used for Western blotting above was partially solubilized by the addition of SDS to a final concentration of 1%.
T4791 12149-12151 DT denotes An
T4792 12152-12159 NN denotes aliquot
T4794 12160-12162 IN denotes of
T4795 12163-12167 DT denotes each
T4797 12168-12176 JJ denotes cortical
T4796 12177-12187 NN denotes homogenate
T4798 12188-12192 VBN denotes used
T4799 12193-12196 IN denotes for
T4800 12197-12204 NNP denotes Western
T4801 12205-12213 NN denotes blotting
T4802 12214-12219 RB denotes above
T4803 12220-12223 VBD denotes was
T4804 12224-12233 RB denotes partially
T4793 12234-12245 VBN denotes solubilized
T4805 12246-12248 IN denotes by
T4806 12249-12252 DT denotes the
T4807 12253-12261 NN denotes addition
T4808 12262-12264 IN denotes of
T4809 12265-12268 NN denotes SDS
T4810 12269-12271 IN denotes to
T4811 12272-12273 DT denotes a
T4813 12274-12279 JJ denotes final
T4812 12280-12293 NN denotes concentration
T4814 12294-12296 IN denotes of
T4815 12297-12298 CD denotes 1
T4816 12298-12299 NN denotes %
T4817 12299-12300 . denotes .
T4818 12300-12488 sentence denotes Serial 1:2 dilutions were made with 1× PBS/1% SDS, and 100 μl of each dilution was then vacuum-filtered through a pre-wet 0.22-μm cellulose acetate membrane (Schleicher and Schuell) [22].
T4819 12301-12307 JJ denotes Serial
T4821 12308-12309 CD denotes 1
T4822 12309-12310 SYM denotes :
T4823 12310-12311 CD denotes 2
T4820 12312-12321 NNS denotes dilutions
T4825 12322-12326 VBD denotes were
T4824 12327-12331 VBN denotes made
T4826 12332-12336 IN denotes with
T4827 12337-12338 CD denotes 1
T4829 12338-12339 SYM denotes ×
T4828 12340-12343 NN denotes PBS
T4830 12343-12344 HYPH denotes /
T4831 12344-12345 CD denotes 1
T4832 12345-12346 NN denotes %
T4833 12347-12350 NN denotes SDS
T4834 12350-12352 , denotes ,
T4835 12352-12355 CC denotes and
T4836 12356-12359 CD denotes 100
T4837 12360-12362 NN denotes μl
T4839 12363-12365 IN denotes of
T4840 12366-12370 DT denotes each
T4841 12371-12379 NN denotes dilution
T4842 12380-12383 VBD denotes was
T4843 12384-12388 RB denotes then
T4844 12389-12395 NN denotes vacuum
T4845 12395-12396 HYPH denotes -
T4838 12396-12404 VBN denotes filtered
T4846 12405-12412 IN denotes through
T4847 12413-12414 DT denotes a
T4849 12415-12422 JJ denotes pre-wet
T4850 12423-12427 CD denotes 0.22
T4852 12427-12428 HYPH denotes -
T4851 12428-12430 NN denotes μm
T4853 12431-12440 NN denotes cellulose
T4854 12441-12448 NN denotes acetate
T4848 12449-12457 NN denotes membrane
T4855 12458-12459 -LRB- denotes (
T4856 12459-12469 NNP denotes Schleicher
T4857 12470-12473 CC denotes and
T4858 12474-12481 NNP denotes Schuell
T4859 12481-12482 -RRB- denotes )
T4860 12483-12484 -LRB- denotes [
T4861 12484-12486 CD denotes 22
T4862 12486-12487 -RRB- denotes ]
T4863 12487-12488 . denotes .
T4864 12488-12704 sentence denotes Each well was washed several times with PBS, after which blots were incubated overnight with polyclonal anti-Aβ antibody (Zymed Laboratories) diluted 1:600 in a blocking solution of 1× TBS/5% nonfat dry milk powder.
T4865 12489-12493 DT denotes Each
T4866 12494-12498 NN denotes well
T4868 12499-12502 VBD denotes was
T4867 12503-12509 VBN denotes washed
T4869 12510-12517 JJ denotes several
T4870 12518-12523 NNS denotes times
T4871 12524-12528 IN denotes with
T4872 12529-12532 NN denotes PBS
T4873 12532-12534 , denotes ,
T4874 12534-12539 IN denotes after
T4876 12540-12545 WDT denotes which
T4877 12546-12551 NNS denotes blots
T4878 12552-12556 VBD denotes were
T4875 12557-12566 VBN denotes incubated
T4879 12567-12576 RB denotes overnight
T4880 12577-12581 IN denotes with
T4881 12582-12592 JJ denotes polyclonal
T4883 12593-12600 JJ denotes anti-Aβ
T4882 12601-12609 NN denotes antibody
T4884 12610-12611 -LRB- denotes (
T4886 12611-12616 NNP denotes Zymed
T4885 12617-12629 NNP denotes Laboratories
T4887 12629-12630 -RRB- denotes )
T4888 12631-12638 VBN denotes diluted
T4889 12639-12640 CD denotes 1
T4890 12640-12641 SYM denotes :
T4891 12641-12644 CD denotes 600
T4892 12645-12647 IN denotes in
T4893 12648-12649 DT denotes a
T4895 12650-12658 NN denotes blocking
T4894 12659-12667 NN denotes solution
T4896 12668-12670 IN denotes of
T4897 12671-12672 CD denotes 1
T4899 12672-12673 SYM denotes ×
T4898 12674-12677 NN denotes TBS
T4901 12677-12678 HYPH denotes /
T4902 12678-12679 CD denotes 5
T4903 12679-12680 NN denotes %
T4905 12681-12687 JJ denotes nonfat
T4906 12688-12691 JJ denotes dry
T4904 12692-12696 NN denotes milk
T4900 12697-12703 NN denotes powder
T4907 12703-12704 . denotes .
T4908 12704-12892 sentence denotes After washing the blots three times for 10 min each in 1× TBS/0.1% Tween-20, the membrane was incubated for 1 h with HRP-conjugated protein A (Sigma) diluted 1:5,000 in blocking solution.
T4909 12705-12710 IN denotes After
T4911 12711-12718 VBG denotes washing
T4912 12719-12722 DT denotes the
T4913 12723-12728 NNS denotes blots
T4914 12729-12734 CD denotes three
T4915 12735-12740 NNS denotes times
T4916 12741-12744 IN denotes for
T4917 12745-12747 CD denotes 10
T4918 12748-12751 NN denotes min
T4919 12752-12756 DT denotes each
T4920 12757-12759 IN denotes in
T4921 12760-12761 CD denotes 1
T4923 12761-12762 SYM denotes ×
T4922 12763-12766 NN denotes TBS
T4924 12766-12767 HYPH denotes /
T4925 12767-12770 CD denotes 0.1
T4926 12770-12771 NN denotes %
T4927 12772-12777 NN denotes Tween
T4928 12777-12778 HYPH denotes -
T4929 12778-12780 CD denotes 20
T4930 12780-12782 , denotes ,
T4931 12782-12785 DT denotes the
T4932 12786-12794 NN denotes membrane
T4933 12795-12798 VBD denotes was
T4910 12799-12808 VBN denotes incubated
T4934 12809-12812 IN denotes for
T4935 12813-12814 CD denotes 1
T4936 12815-12816 NN denotes h
T4937 12817-12821 IN denotes with
T4938 12822-12825 NN denotes HRP
T4940 12825-12826 HYPH denotes -
T4939 12826-12836 VBN denotes conjugated
T4942 12837-12844 NN denotes protein
T4941 12845-12846 NN denotes A
T4943 12847-12848 -LRB- denotes (
T4944 12848-12853 NNP denotes Sigma
T4945 12853-12854 -RRB- denotes )
T4946 12855-12862 VBN denotes diluted
T4947 12863-12864 CD denotes 1
T4948 12864-12865 SYM denotes :
T4949 12865-12870 CD denotes 5,000
T4950 12871-12873 IN denotes in
T4951 12874-12882 NN denotes blocking
T4952 12883-12891 NN denotes solution
T4953 12891-12892 . denotes .
T4954 12892-13085 sentence denotes The membranes were again washed three times with 1× TBS/0.1% Tween-20, before antibody binding was detected with enhanced chemiluminescence (PerkinElmer, Boston, Massachusetts, United States).
T4955 12893-12896 DT denotes The
T4956 12897-12906 NNS denotes membranes
T4958 12907-12911 VBD denotes were
T4959 12912-12917 RB denotes again
T4957 12918-12924 VBN denotes washed
T4960 12925-12930 CD denotes three
T4961 12931-12936 NNS denotes times
T4962 12937-12941 IN denotes with
T4963 12942-12943 CD denotes 1
T4965 12943-12944 SYM denotes ×
T4964 12945-12948 NN denotes TBS
T4966 12948-12949 HYPH denotes /
T4967 12949-12952 CD denotes 0.1
T4968 12952-12953 NN denotes %
T4969 12954-12959 NN denotes Tween
T4970 12959-12960 HYPH denotes -
T4971 12960-12962 CD denotes 20
T4972 12962-12964 , denotes ,
T4973 12964-12970 IN denotes before
T4975 12971-12979 NN denotes antibody
T4976 12980-12987 NN denotes binding
T4977 12988-12991 VBD denotes was
T4974 12992-13000 VBN denotes detected
T4978 13001-13005 IN denotes with
T4979 13006-13014 VBN denotes enhanced
T4980 13015-13032 NN denotes chemiluminescence
T4981 13033-13034 -LRB- denotes (
T4982 13034-13045 NNP denotes PerkinElmer
T4983 13045-13047 , denotes ,
T4984 13047-13053 NNP denotes Boston
T4985 13053-13055 , denotes ,
T4986 13055-13068 NNP denotes Massachusetts
T4987 13068-13070 , denotes ,
T4988 13070-13076 NNP denotes United
T4989 13077-13083 NNP denotes States
T4990 13083-13084 -RRB- denotes )
T4991 13084-13085 . denotes .
T4992 13085-13272 sentence denotes Digital images of each blot were captured with a Molecular Imager FX gel documentation system, and the intensity of Aβ staining was quantified using Quantity One image analysis software.
T4993 13086-13093 JJ denotes Digital
T4994 13094-13100 NNS denotes images
T4996 13101-13103 IN denotes of
T4997 13104-13108 DT denotes each
T4998 13109-13113 NN denotes blot
T4999 13114-13118 VBD denotes were
T4995 13119-13127 VBN denotes captured
T5000 13128-13132 IN denotes with
T5001 13133-13134 DT denotes a
T5003 13135-13144 JJ denotes Molecular
T5004 13145-13151 NNP denotes Imager
T5005 13152-13154 NNP denotes FX
T5006 13155-13158 NN denotes gel
T5007 13159-13172 NN denotes documentation
T5002 13173-13179 NN denotes system
T5008 13179-13181 , denotes ,
T5009 13181-13184 CC denotes and
T5010 13185-13188 DT denotes the
T5011 13189-13198 NN denotes intensity
T5013 13199-13201 IN denotes of
T5014 13202-13204 NN denotes
T5015 13205-13213 NN denotes staining
T5016 13214-13217 VBD denotes was
T5012 13218-13228 VBN denotes quantified
T5017 13229-13234 VBG denotes using
T5018 13235-13243 NNP denotes Quantity
T5020 13244-13247 CD denotes One
T5021 13248-13253 NN denotes image
T5022 13254-13262 NN denotes analysis
T5019 13263-13271 NN denotes software
T5023 13271-13272 . denotes .
T5075 13274-13276 NN denotes
T5076 13277-13282 NN denotes ELISA
T5077 13282-13460 sentence denotes An aliquot of cortical homogenate generated for Western analysis described above was subjected to a three-step sequential extraction using PBS, 2% SDS, and 70% formic acid (FA).
T5078 13283-13285 DT denotes An
T5079 13286-13293 NN denotes aliquot
T5081 13294-13296 IN denotes of
T5082 13297-13305 JJ denotes cortical
T5083 13306-13316 NN denotes homogenate
T5084 13317-13326 VBN denotes generated
T5085 13327-13330 IN denotes for
T5086 13331-13338 NNP denotes Western
T5087 13339-13347 NN denotes analysis
T5088 13348-13357 VBN denotes described
T5089 13358-13363 RB denotes above
T5090 13364-13367 VBD denotes was
T5080 13368-13377 VBN denotes subjected
T5091 13378-13380 IN denotes to
T5092 13381-13382 DT denotes a
T5094 13383-13388 CD denotes three
T5096 13388-13389 HYPH denotes -
T5095 13389-13393 NN denotes step
T5097 13394-13404 JJ denotes sequential
T5093 13405-13415 NN denotes extraction
T5098 13416-13421 VBG denotes using
T5099 13422-13425 NN denotes PBS
T5100 13425-13427 , denotes ,
T5101 13427-13428 CD denotes 2
T5102 13428-13429 NN denotes %
T5103 13430-13433 NN denotes SDS
T5104 13433-13435 , denotes ,
T5105 13435-13438 CC denotes and
T5106 13439-13441 CD denotes 70
T5107 13441-13442 NN denotes %
T5108 13443-13449 JJ denotes formic
T5109 13450-13454 NN denotes acid
T5110 13455-13456 -LRB- denotes (
T5111 13456-13458 NN denotes FA
T5112 13458-13459 -RRB- denotes )
T5113 13459-13460 . denotes .
T5114 13460-13656 sentence denotes At each step, the sample was sonicated in appropriate buffer and centrifuged at 100,000g for 30 min (1- to 1.5-mo samples) or 60 min (6- to 12-mo samples) at 4 °C as previously described [23–25].
T5115 13461-13463 IN denotes At
T5117 13464-13468 DT denotes each
T5118 13469-13473 NN denotes step
T5119 13473-13475 , denotes ,
T5120 13475-13478 DT denotes the
T5121 13479-13485 NN denotes sample
T5122 13486-13489 VBD denotes was
T5116 13490-13499 VBN denotes sonicated
T5123 13500-13502 IN denotes in
T5124 13503-13514 JJ denotes appropriate
T5125 13515-13521 NN denotes buffer
T5126 13522-13525 CC denotes and
T5127 13526-13537 VBN denotes centrifuged
T5128 13538-13540 IN denotes at
T5129 13541-13549 CD denotes 100,000g
T5130 13550-13553 IN denotes for
T5131 13554-13556 CD denotes 30
T5132 13557-13560 NN denotes min
T5133 13561-13562 -LRB- denotes (
T5135 13562-13563 CD denotes 1
T5137 13563-13564 HYPH denotes -
T5138 13565-13567 IN denotes to
T5136 13568-13571 CD denotes 1.5
T5140 13571-13572 HYPH denotes -
T5139 13572-13574 NN denotes mo
T5134 13575-13582 NNS denotes samples
T5141 13582-13583 -RRB- denotes )
T5142 13584-13586 CC denotes or
T5143 13587-13589 CD denotes 60
T5144 13590-13593 NN denotes min
T5145 13594-13595 -LRB- denotes (
T5147 13595-13596 CD denotes 6
T5149 13596-13597 HYPH denotes -
T5150 13598-13600 IN denotes to
T5148 13601-13603 CD denotes 12
T5152 13603-13604 HYPH denotes -
T5151 13604-13606 NN denotes mo
T5146 13607-13614 NNS denotes samples
T5153 13614-13615 -RRB- denotes )
T5154 13616-13618 IN denotes at
T5155 13619-13620 CD denotes 4
T5156 13621-13623 NN denotes °C
T5157 13624-13626 IN denotes as
T5159 13627-13637 RB denotes previously
T5158 13638-13647 VBN denotes described
T5160 13648-13649 -LRB- denotes [
T5161 13649-13651 CD denotes 23
T5162 13651-13652 SYM denotes
T5163 13652-13654 CD denotes 25
T5164 13654-13655 -RRB- denotes ]
T5165 13655-13656 . denotes .
T5166 13656-13761 sentence denotes The supernatant was removed for analysis, and the pellet was sonicated in the next solution in sequence.
T5167 13657-13660 DT denotes The
T5168 13661-13672 NN denotes supernatant
T5170 13673-13676 VBD denotes was
T5169 13677-13684 VBN denotes removed
T5171 13685-13688 IN denotes for
T5172 13689-13697 NN denotes analysis
T5173 13697-13699 , denotes ,
T5174 13699-13702 CC denotes and
T5175 13703-13706 DT denotes the
T5176 13707-13713 NN denotes pellet
T5178 13714-13717 VBD denotes was
T5177 13718-13727 VBN denotes sonicated
T5179 13728-13730 IN denotes in
T5180 13731-13734 DT denotes the
T5182 13735-13739 JJ denotes next
T5181 13740-13748 NN denotes solution
T5183 13749-13751 IN denotes in
T5184 13752-13760 NN denotes sequence
T5185 13760-13761 . denotes .
T5186 13761-13924 sentence denotes The 2% SDS extracts were diluted in EC buffer, and the FA extracts neutralized with 1M Tris-phosphate buffer (pH 11) then diluted with EC buffer prior to testing.
T5187 13762-13765 DT denotes The
T5189 13766-13767 CD denotes 2
T5190 13767-13768 NN denotes %
T5191 13769-13772 NN denotes SDS
T5188 13773-13781 NNS denotes extracts
T5193 13782-13786 VBD denotes were
T5192 13787-13794 VBN denotes diluted
T5194 13795-13797 IN denotes in
T5195 13798-13800 NN denotes EC
T5196 13801-13807 NN denotes buffer
T5197 13807-13809 , denotes ,
T5198 13809-13812 CC denotes and
T5199 13813-13816 DT denotes the
T5201 13817-13819 NN denotes FA
T5200 13820-13828 NNS denotes extracts
T5202 13829-13840 VBN denotes neutralized
T5203 13841-13845 IN denotes with
T5204 13846-13848 NN denotes 1M
T5206 13849-13853 NN denotes Tris
T5207 13853-13854 HYPH denotes -
T5208 13854-13863 NN denotes phosphate
T5205 13864-13870 NN denotes buffer
T5209 13871-13872 -LRB- denotes (
T5210 13872-13874 NN denotes pH
T5211 13875-13877 CD denotes 11
T5212 13877-13878 -RRB- denotes )
T5213 13879-13883 RB denotes then
T5214 13884-13891 VBD denotes diluted
T5215 13892-13896 IN denotes with
T5216 13897-13899 NN denotes EC
T5217 13900-13906 NN denotes buffer
T5218 13907-13912 JJ denotes prior
T5219 13913-13915 IN denotes to
T5220 13916-13923 NN denotes testing
T5221 13923-13924 . denotes .
T5222 13924-14110 sentence denotes Human Aβ was measured in each fraction using BAN50 for capture (epitope Aβ1–16) and BA27 and BC05 for detection (Aβ40 and Aβ42, respectively) (Takeda Chemical Industries, Osaka, Japan).
T5223 13925-13930 JJ denotes Human
T5224 13931-13933 NN denotes
T5226 13934-13937 VBD denotes was
T5225 13938-13946 VBN denotes measured
T5227 13947-13949 IN denotes in
T5228 13950-13954 DT denotes each
T5229 13955-13963 NN denotes fraction
T5230 13964-13969 VBG denotes using
T5231 13970-13975 NN denotes BAN50
T5232 13976-13979 IN denotes for
T5233 13980-13987 NN denotes capture
T5234 13988-13989 -LRB- denotes (
T5236 13989-13996 NN denotes epitope
T5237 13997-14000 NN denotes Aβ1
T5238 14000-14001 HYPH denotes
T5235 14001-14003 NN denotes 16
T5239 14003-14004 -RRB- denotes )
T5240 14005-14008 CC denotes and
T5241 14009-14013 NN denotes BA27
T5242 14014-14017 CC denotes and
T5243 14018-14022 NN denotes BC05
T5244 14023-14026 IN denotes for
T5245 14027-14036 NN denotes detection
T5246 14037-14038 -LRB- denotes (
T5247 14038-14042 NN denotes Aβ40
T5248 14043-14046 CC denotes and
T5249 14047-14051 NN denotes Aβ42
T5250 14051-14053 , denotes ,
T5251 14053-14065 RB denotes respectively
T5252 14065-14066 -RRB- denotes )
T5253 14067-14068 -LRB- denotes (
T5255 14068-14074 NNP denotes Takeda
T5256 14075-14083 NNP denotes Chemical
T5254 14084-14094 NNPS denotes Industries
T5257 14094-14096 , denotes ,
T5258 14096-14101 NNP denotes Osaka
T5259 14101-14103 , denotes ,
T5260 14103-14108 NNP denotes Japan
T5261 14108-14109 -RRB- denotes )
T5262 14109-14110 . denotes .
T5263 14110-14267 sentence denotes Total Aβ (mouse + human; 1- to 1.5-mo samples only) was measured in each fraction using BNT77 for capture (epitope Aβ11–28) and BA27 and BC05 for detection.
T5264 14111-14116 JJ denotes Total
T5265 14117-14119 NN denotes
T5267 14120-14121 -LRB- denotes (
T5269 14121-14126 NN denotes mouse
T5270 14127-14128 SYM denotes +
T5271 14129-14134 JJ denotes human
T5272 14134-14135 : denotes ;
T5273 14136-14137 CD denotes 1
T5275 14137-14138 HYPH denotes -
T5276 14139-14141 IN denotes to
T5274 14142-14145 CD denotes 1.5
T5278 14145-14146 HYPH denotes -
T5277 14146-14148 NN denotes mo
T5268 14149-14156 NNS denotes samples
T5279 14157-14161 RB denotes only
T5280 14161-14162 -RRB- denotes )
T5281 14163-14166 VBD denotes was
T5266 14167-14175 VBN denotes measured
T5282 14176-14178 IN denotes in
T5283 14179-14183 DT denotes each
T5284 14184-14192 NN denotes fraction
T5285 14193-14198 VBG denotes using
T5286 14199-14204 NN denotes BNT77
T5287 14205-14208 IN denotes for
T5288 14209-14216 NN denotes capture
T5289 14217-14218 -LRB- denotes (
T5291 14218-14225 NN denotes epitope
T5290 14226-14230 NN denotes Aβ11
T5292 14230-14231 HYPH denotes
T5293 14231-14233 CD denotes 28
T5294 14233-14234 -RRB- denotes )
T5295 14235-14238 CC denotes and
T5296 14239-14243 NN denotes BA27
T5297 14244-14247 CC denotes and
T5298 14248-14252 NN denotes BC05
T5299 14253-14256 IN denotes for
T5300 14257-14266 NN denotes detection
T5301 14266-14267 . denotes .
T5302 14267-14364 sentence denotes All values were calculated as picomoles per gram based on the initial weight of cortical tissue.
T5303 14268-14271 DT denotes All
T5304 14272-14278 NNS denotes values
T5306 14279-14283 VBD denotes were
T5305 14284-14294 VBN denotes calculated
T5307 14295-14297 IN denotes as
T5308 14298-14307 NNS denotes picomoles
T5309 14308-14311 IN denotes per
T5310 14312-14316 NN denotes gram
T5311 14317-14322 VBN denotes based
T5312 14323-14325 IN denotes on
T5313 14326-14329 DT denotes the
T5315 14330-14337 JJ denotes initial
T5314 14338-14344 NN denotes weight
T5316 14345-14347 IN denotes of
T5317 14348-14356 JJ denotes cortical
T5318 14357-14363 NN denotes tissue
T5319 14363-14364 . denotes .
T5339 14366-14374 NN denotes Activity
T5340 14375-14385 NN denotes Monitoring
T5341 14385-14494 sentence denotes Daily basal activity was studied in 28 CaMKIIα-tTA × tet-APPswe/ind line 107 mice between 4 and 5 mo of age.
T5342 14386-14391 JJ denotes Daily
T5344 14392-14397 JJ denotes basal
T5343 14398-14406 NN denotes activity
T5346 14407-14410 VBD denotes was
T5345 14411-14418 VBN denotes studied
T5347 14419-14421 IN denotes in
T5348 14422-14424 CD denotes 28
T5350 14425-14432 NN denotes CaMKIIα
T5352 14432-14433 HYPH denotes -
T5353 14433-14436 NN denotes tTA
T5354 14437-14438 SYM denotes ×
T5355 14439-14442 NN denotes tet
T5356 14442-14443 HYPH denotes -
T5357 14443-14449 NN denotes APPswe
T5358 14449-14450 HYPH denotes /
T5351 14450-14453 NN denotes ind
T5359 14454-14458 NN denotes line
T5360 14459-14462 CD denotes 107
T5349 14463-14467 NNS denotes mice
T5361 14468-14475 IN denotes between
T5362 14476-14477 CD denotes 4
T5364 14478-14481 CC denotes and
T5365 14482-14483 CD denotes 5
T5363 14484-14486 NN denotes mo
T5366 14487-14489 IN denotes of
T5367 14490-14493 NN denotes age
T5368 14493-14494 . denotes .
T5369 14494-14650 sentence denotes Animals were separated into individual cages immediately before the start of each experiment (n = 3–6 per genotype untreated, 2–5 per genotype dox-reared).
T5370 14495-14502 NNS denotes Animals
T5372 14503-14507 VBD denotes were
T5371 14508-14517 VBN denotes separated
T5373 14518-14522 IN denotes into
T5374 14523-14533 JJ denotes individual
T5375 14534-14539 NNS denotes cages
T5376 14540-14551 RB denotes immediately
T5377 14552-14558 IN denotes before
T5378 14559-14562 DT denotes the
T5379 14563-14568 NN denotes start
T5380 14569-14571 IN denotes of
T5381 14572-14576 DT denotes each
T5382 14577-14587 NN denotes experiment
T5383 14588-14589 -LRB- denotes (
T5385 14589-14590 NN denotes n
T5386 14591-14592 SYM denotes =
T5387 14593-14594 CD denotes 3
T5388 14594-14595 SYM denotes
T5384 14595-14596 CD denotes 6
T5389 14597-14600 IN denotes per
T5390 14601-14609 NN denotes genotype
T5391 14610-14619 JJ denotes untreated
T5392 14619-14621 , denotes ,
T5393 14621-14622 CD denotes 2
T5395 14622-14623 SYM denotes
T5394 14623-14624 CD denotes 5
T5396 14625-14628 IN denotes per
T5397 14629-14637 NN denotes genotype
T5398 14638-14641 NN denotes dox
T5400 14641-14642 HYPH denotes -
T5399 14642-14648 VBN denotes reared
T5401 14648-14649 -RRB- denotes )
T5402 14649-14650 . denotes .
T5403 14650-14879 sentence denotes The cages were placed inside activity-monitoring frames designed to count every time the animal passed through one of three photobeams spanning the width of the cage (San Diego Instruments, San Diego, California, United States).
T5404 14651-14654 DT denotes The
T5405 14655-14660 NNS denotes cages
T5407 14661-14665 VBD denotes were
T5406 14666-14672 VBN denotes placed
T5408 14673-14679 IN denotes inside
T5409 14680-14688 NN denotes activity
T5411 14688-14689 HYPH denotes -
T5410 14689-14699 VBG denotes monitoring
T5412 14700-14706 NNS denotes frames
T5413 14707-14715 VBN denotes designed
T5414 14716-14718 TO denotes to
T5415 14719-14724 VB denotes count
T5416 14725-14730 DT denotes every
T5417 14731-14735 NN denotes time
T5418 14736-14739 DT denotes the
T5419 14740-14746 NN denotes animal
T5420 14747-14753 VBN denotes passed
T5421 14754-14761 IN denotes through
T5422 14762-14765 CD denotes one
T5423 14766-14768 IN denotes of
T5424 14769-14774 CD denotes three
T5425 14775-14785 NNS denotes photobeams
T5426 14786-14794 VBG denotes spanning
T5427 14795-14798 DT denotes the
T5428 14799-14804 NN denotes width
T5429 14805-14807 IN denotes of
T5430 14808-14811 DT denotes the
T5431 14812-14816 NN denotes cage
T5432 14817-14818 -LRB- denotes (
T5434 14818-14821 NNP denotes San
T5435 14822-14827 NNP denotes Diego
T5433 14828-14839 NNP denotes Instruments
T5436 14839-14841 , denotes ,
T5437 14841-14844 NNP denotes San
T5438 14845-14850 NNP denotes Diego
T5439 14850-14852 , denotes ,
T5440 14852-14862 NNP denotes California
T5441 14862-14864 , denotes ,
T5442 14864-14870 NNP denotes United
T5443 14871-14877 NNP denotes States
T5444 14877-14878 -RRB- denotes )
T5445 14878-14879 . denotes .
T5446 14879-15007 sentence denotes Experiments were started midway through the light phase of the day, and data were collected in 1-h bins for the following 48 h.
T5447 14880-14891 NNS denotes Experiments
T5449 14892-14896 VBD denotes were
T5448 14897-14904 VBN denotes started
T5450 14905-14911 RB denotes midway
T5451 14912-14919 IN denotes through
T5452 14920-14923 DT denotes the
T5454 14924-14929 NN denotes light
T5453 14930-14935 NN denotes phase
T5455 14936-14938 IN denotes of
T5456 14939-14942 DT denotes the
T5457 14943-14946 NN denotes day
T5458 14946-14948 , denotes ,
T5459 14948-14951 CC denotes and
T5460 14952-14956 NNS denotes data
T5462 14957-14961 VBD denotes were
T5461 14962-14971 VBN denotes collected
T5463 14972-14974 IN denotes in
T5464 14975-14976 CD denotes 1
T5466 14976-14977 HYPH denotes -
T5465 14977-14978 NN denotes h
T5467 14979-14983 NNS denotes bins
T5468 14984-14987 IN denotes for
T5469 14988-14991 DT denotes the
T5471 14992-15001 JJ denotes following
T5472 15002-15004 CD denotes 48
T5470 15005-15006 NN denotes h
T5473 15006-15007 . denotes .
T5474 15007-15154 sentence denotes Testing rooms were maintained on the same 13:11 h day:night cycle as the main animal housing areas and were closed to entry during the experiment.
T5475 15008-15015 NN denotes Testing
T5476 15016-15021 NNS denotes rooms
T5478 15022-15026 VBD denotes were
T5477 15027-15037 VBN denotes maintained
T5479 15038-15040 IN denotes on
T5480 15041-15044 DT denotes the
T5482 15045-15049 JJ denotes same
T5483 15050-15052 CD denotes 13
T5485 15052-15053 SYM denotes :
T5486 15053-15055 CD denotes 11
T5484 15056-15057 NN denotes h
T5487 15058-15061 NN denotes day
T5488 15061-15062 SYM denotes :
T5489 15062-15067 NN denotes night
T5481 15068-15073 NN denotes cycle
T5490 15074-15076 IN denotes as
T5491 15077-15080 DT denotes the
T5493 15081-15085 JJ denotes main
T5494 15086-15092 NN denotes animal
T5495 15093-15100 NN denotes housing
T5492 15101-15106 NNS denotes areas
T5496 15107-15110 CC denotes and
T5497 15111-15115 VBD denotes were
T5498 15116-15122 VBN denotes closed
T5499 15123-15125 IN denotes to
T5500 15126-15131 NN denotes entry
T5501 15132-15138 IN denotes during
T5502 15139-15142 DT denotes the
T5503 15143-15153 NN denotes experiment
T5504 15153-15154 . denotes .
T5510 15156-15167 JJ denotes Statistical
T5511 15168-15176 NNS denotes Analyses
T5512 15176-15448 sentence denotes Statistical analyses of protein expression, ELISA data, and filter trap assays were performed by ANOVA with Tukey's honest significant difference post-hoc test applied to significant main effects or interactions (Statistica 6.0, StatSoft, Tulsa, Oklahoma, United States).
T5513 15177-15188 JJ denotes Statistical
T5514 15189-15197 NNS denotes analyses
T5516 15198-15200 IN denotes of
T5517 15201-15208 NN denotes protein
T5518 15209-15219 NN denotes expression
T5519 15219-15221 , denotes ,
T5520 15221-15226 NN denotes ELISA
T5521 15227-15231 NNS denotes data
T5522 15231-15233 , denotes ,
T5523 15233-15236 CC denotes and
T5524 15237-15243 NN denotes filter
T5525 15244-15248 NN denotes trap
T5526 15249-15255 NNS denotes assays
T5527 15256-15260 VBD denotes were
T5515 15261-15270 VBN denotes performed
T5528 15271-15273 IN denotes by
T5529 15274-15279 NN denotes ANOVA
T5530 15280-15284 IN denotes with
T5531 15285-15290 NNP denotes Tukey
T5533 15290-15292 POS denotes 's
T5534 15293-15299 JJ denotes honest
T5535 15300-15311 JJ denotes significant
T5536 15312-15322 NN denotes difference
T5537 15323-15327 FW denotes post
T5539 15327-15328 HYPH denotes -
T5538 15328-15331 FW denotes hoc
T5532 15332-15336 NN denotes test
T5540 15337-15344 VBN denotes applied
T5541 15345-15347 IN denotes to
T5542 15348-15359 JJ denotes significant
T5544 15360-15364 JJ denotes main
T5543 15365-15372 NNS denotes effects
T5545 15373-15375 CC denotes or
T5546 15376-15388 NNS denotes interactions
T5547 15389-15390 -LRB- denotes (
T5548 15390-15400 NNP denotes Statistica
T5549 15401-15404 CD denotes 6.0
T5550 15404-15406 , denotes ,
T5551 15406-15414 NNP denotes StatSoft
T5552 15414-15416 , denotes ,
T5553 15416-15421 NNP denotes Tulsa
T5554 15421-15423 , denotes ,
T5555 15423-15431 NNP denotes Oklahoma
T5556 15431-15433 , denotes ,
T5557 15433-15439 NNP denotes United
T5558 15440-15446 NNP denotes States
T5559 15446-15447 -RRB- denotes )
T5560 15447-15448 . denotes .
T5561 15448-15588 sentence denotes In cases of positively skewed data distribution, log10(x + 0.5) transformation was applied to the raw data before submitting them to ANOVA.
T5562 15449-15451 IN denotes In
T5564 15452-15457 NNS denotes cases
T5565 15458-15460 IN denotes of
T5566 15461-15471 RB denotes positively
T5567 15472-15478 VBN denotes skewed
T5569 15479-15483 NNS denotes data
T5568 15484-15496 NN denotes distribution
T5570 15496-15498 , denotes ,
T5571 15498-15503 NN denotes log10
T5573 15503-15504 -LRB- denotes (
T5572 15504-15505 NN denotes x
T5575 15506-15507 SYM denotes +
T5576 15508-15511 CD denotes 0.5
T5577 15511-15512 -RRB- denotes )
T5574 15513-15527 NN denotes transformation
T5578 15528-15531 VBD denotes was
T5563 15532-15539 VBN denotes applied
T5579 15540-15542 IN denotes to
T5580 15543-15546 DT denotes the
T5582 15547-15550 JJ denotes raw
T5581 15551-15555 NNS denotes data
T5583 15556-15562 IN denotes before
T5584 15563-15573 VBG denotes submitting
T5585 15574-15578 PRP denotes them
T5586 15579-15581 IN denotes to
T5587 15582-15587 NN denotes ANOVA
T5588 15587-15588 . denotes .
R1000 T1625 T1626 det the,promoter
R1001 T1626 T1624 dobj promoter,cloning
R1002 T1627 T1628 npadvmod tetracycline,responsive
R1003 T1628 T1626 amod responsive,promoter
R1004 T1629 T1628 punct -,responsive
R1005 T1630 T1631 punct (,6
R1006 T1631 T1626 parataxis 6,promoter
R1007 T1632 T1631 nmod bp,6
R1008 T1633 T1634 punct –,481
R1009 T1634 T1631 prep 481,6
R1010 T1635 T1631 punct ),6
R1011 T1636 T1624 prep from,cloning
R1012 T1637 T1636 pobj pTetSplice,from
R1013 T1638 T1637 prep by,pTetSplice
R1014 T1639 T1638 pobj PCR,by
R1015 T1640 T1639 acl using,PCR
R1016 T1641 T1640 dobj primers,using
R1017 T1642 T1643 dep that,added
R1018 T1643 T1641 relcl added,primers
R1019 T1644 T1645 amod external,sites
R1020 T1645 T1643 dobj sites,added
R1021 T1646 T1645 nmod BamHI,sites
R1022 T1647 T1646 cc and,BamHI
R1023 T1648 T1646 conj NotI,BamHI
R1024 T1649 T1643 prep to,added
R1025 T1650 T1651 det the,end
R1026 T1651 T1649 pobj end,to
R1027 T1652 T1651 nummod 5,end
R1028 T1653 T1652 punct ′,5
R1029 T1654 T1643 cc and,added
R1030 T1655 T1656 det a,site
R1031 T1656 T1643 conj site,added
R1032 T1657 T1656 compound BamHI,site
R1033 T1658 T1656 prep to,site
R1034 T1659 T1660 det the,end
R1035 T1660 T1658 pobj end,to
R1036 T1661 T1660 nummod 3,end
R1037 T1662 T1661 punct ′,3
R1038 T1663 T1622 punct ", ",began
R1039 T1664 T1665 mark while,destroying
R1040 T1665 T1622 advcl destroying,began
R1041 T1666 T1667 nmod XhoI,sites
R1042 T1667 T1665 dobj sites,destroying
R1043 T1668 T1666 cc and,XhoI
R1044 T1669 T1666 conj BamHI,XhoI
R1045 T1670 T1667 prep within,sites
R1046 T1671 T1672 det the,promoter
R1047 T1672 T1670 pobj promoter,within
R1048 T1673 T1674 punct (,CCG
R1049 T1674 T1665 parataxis CCG,destroying
R1050 T1675 T1676 dep forward,C
R1051 T1676 T1674 dep C,CCG
R1052 T1677 T1676 punct : ,C
R1053 T1678 T1676 compound GCC,C
R1054 T1679 T1676 compound GGA,C
R1055 T1680 T1676 compound TCC,C
R1056 T1681 T1676 compound GCG,C
R1057 T1682 T1676 compound GCC,C
R1058 T1683 T1676 compound GCC,C
R1059 T1684 T1676 compound GTC,C
R1060 T1685 T1676 compound GAG,C
R1061 T1686 T1676 compound TTT,C
R1062 T1687 T1676 compound ACC,C
R1063 T1688 T1676 compound ACT,C
R1064 T1689 T1676 compound CCC,C
R1065 T1690 T1676 compound TAT,C
R1066 T1691 T1674 punct ;,CCG
R1067 T1692 T1674 dep reverse,CCG
R1068 T1693 T1674 punct : ,CCG
R1069 T1694 T1674 compound GCC,CCG
R1070 T1695 T1674 compound GGA,CCG
R1071 T1696 T1674 compound TCC,CCG
R1072 T1697 T1674 compound ACT,CCG
R1073 T1698 T1674 compound CTA,CCG
R1074 T1699 T1674 compound GAA,CCG
R1075 T1700 T1674 compound GAT,CCG
R1076 T1701 T1674 compound CCC,CCG
R1077 T1702 T1674 compound CGG,CCG
R1078 T1703 T1674 compound GTA,CCG
R1079 T1704 T1674 punct ),CCG
R1080 T1705 T1622 punct .,began
R1081 T1707 T1708 nsubj We,isolated
R1082 T1709 T1708 advmod then,isolated
R1083 T1710 T1711 det the,intron
R1084 T1711 T1708 dobj intron,isolated
R1085 T1712 T1711 compound moPrP.XhoI,intron
R1086 T1713 T1708 prep by,isolated
R1087 T1714 T1713 pobj amplification,by
R1088 T1715 T1714 prep with,amplification
R1089 T1716 T1715 pobj primers,with
R1090 T1717 T1718 dep that,added
R1091 T1718 T1716 relcl added,primers
R1092 T1719 T1720 det an,site
R1093 T1720 T1718 dobj site,added
R1094 T1721 T1720 amod external,site
R1095 T1722 T1720 compound BamHI,site
R1096 T1723 T1718 prep to,added
R1097 T1724 T1725 det the,end
R1098 T1725 T1723 pobj end,to
R1099 T1726 T1725 nummod 5,end
R1100 T1727 T1726 punct ′,5
R1101 T1728 T1725 prep of,end
R1102 T1729 T1728 pobj exon,of
R1103 T1730 T1729 nummod 1,exon
R1104 T1731 T1718 cc and,added
R1105 T1732 T1718 conj ran,added
R1106 T1733 T1732 prep through,ran
R1107 T1734 T1735 det the,site
R1108 T1735 T1733 pobj site,through
R1109 T1736 T1735 compound Asp718,site
R1110 T1737 T1735 prep of,site
R1111 T1738 T1737 pobj exon,of
R1112 T1739 T1738 nummod 2,exon
R1113 T1740 T1741 punct (,TGC
R1114 T1741 T1735 parataxis TGC,site
R1115 T1742 T1743 dep forward,GG
R1116 T1743 T1741 dep GG,TGC
R1117 T1744 T1743 punct : ,GG
R1118 T1745 T1743 compound GCC,GG
R1119 T1746 T1743 compound GGA,GG
R1120 T1747 T1743 compound TCC,GG
R1121 T1748 T1743 compound GAT,GG
R1122 T1749 T1743 compound CAG,GG
R1123 T1750 T1743 compound CAG,GG
R1124 T1751 T1743 compound ACC,GG
R1125 T1752 T1743 compound GAT,GG
R1126 T1753 T1743 compound TCT,GG
R1127 T1754 T1741 punct ;,TGC
R1128 T1755 T1741 dep reverse,TGC
R1129 T1756 T1741 punct : ,TGC
R1130 T1757 T1741 compound GCC,TGC
R1131 T1758 T1741 compound GGT,TGC
R1132 T1759 T1741 compound ACC,TGC
R1133 T1760 T1741 compound ACT,TGC
R1134 T1761 T1741 compound AGG,TGC
R1135 T1762 T1741 compound AAG,TGC
R1136 T1763 T1741 compound GCA,TGC
R1137 T1764 T1741 compound GAA,TGC
R1138 T1765 T1741 punct ),TGC
R1139 T1766 T1708 punct .,isolated
R1140 T1768 T1769 det This,fragment
R1141 T1769 T1774 nsubj fragment,cloned
R1142 T1770 T1771 nummod 2,kb
R1143 T1771 T1769 compound kb,fragment
R1144 T1772 T1771 punct -,kb
R1145 T1773 T1769 compound intron,fragment
R1146 T1775 T1774 aux was,cloned
R1147 T1776 T1774 prep into,cloned
R1148 T1777 T1778 det a,vector
R1149 T1778 T1776 pobj vector,into
R1150 T1779 T1780 compound TA,cloning
R1151 T1780 T1778 compound cloning,vector
R1152 T1781 T1782 punct (,Invitrogen
R1153 T1782 T1778 parataxis Invitrogen,vector
R1154 T1783 T1782 punct ", ",Invitrogen
R1155 T1784 T1782 npadvmod Carlsbad,Invitrogen
R1156 T1785 T1782 punct ", ",Invitrogen
R1157 T1786 T1782 npadvmod California,Invitrogen
R1158 T1787 T1782 punct ", ",Invitrogen
R1159 T1788 T1789 compound United,States
R1160 T1789 T1782 npadvmod States,Invitrogen
R1161 T1790 T1782 punct ),Invitrogen
R1162 T1791 T1774 punct ", ",cloned
R1163 T1792 T1793 advmod then,excised
R1164 T1793 T1774 conj excised,cloned
R1165 T1794 T1793 prep by,excised
R1166 T1795 T1796 compound Asp718,digestion
R1167 T1796 T1794 pobj digestion,by
R1168 T1797 T1793 cc and,excised
R1169 T1798 T1793 conj ligated,excised
R1170 T1799 T1798 prep to,ligated
R1171 T1800 T1801 det the,fragment
R1172 T1801 T1799 pobj fragment,to
R1173 T1802 T1803 nummod 6.8,kb
R1174 T1803 T1801 compound kb,fragment
R1175 T1804 T1803 punct -,kb
R1176 T1805 T1801 compound Asp718,fragment
R1177 T1806 T1801 prep of,fragment
R1178 T1807 T1806 pobj moPrP.XhoI,of
R1179 T1808 T1801 acl containing,fragment
R1180 T1809 T1808 dobj exon,containing
R1181 T1810 T1809 nummod 2,exon
R1182 T1811 T1809 punct ", ",exon
R1183 T1812 T1809 conj exon,exon
R1184 T1813 T1812 nummod 3,exon
R1185 T1814 T1812 punct ", ",exon
R1186 T1815 T1816 det the,UTR
R1187 T1816 T1812 conj UTR,exon
R1188 T1817 T1816 nummod 3,UTR
R1189 T1818 T1817 punct ′,3
R1190 T1819 T1816 punct ", ",UTR
R1191 T1820 T1816 cc and,UTR
R1192 T1821 T1816 conj pBluescript,UTR
R1193 T1822 T1823 aux to,generate
R1194 T1823 T1774 advcl generate,cloned
R1195 T1824 T1825 det an,vector
R1196 T1825 T1823 dobj vector,generate
R1197 T1826 T1825 amod intermediate,vector
R1198 T1827 T1823 prep with,generate
R1199 T1828 T1829 det all,exons
R1200 T1829 T1827 pobj exons,with
R1201 T1830 T1829 nummod three,exons
R1202 T1831 T1829 cc and,exons
R1203 T1832 T1833 det a,intron
R1204 T1833 T1829 conj intron,exons
R1205 T1834 T1833 amod central,intron
R1206 T1835 T1829 cc but,exons
R1207 T1836 T1837 det no,promoter
R1208 T1837 T1829 conj promoter,exons
R1209 T1838 T1774 punct .,cloned
R1210 T1840 T1841 det This,vector
R1211 T1841 T1842 nsubjpass vector,opened
R1212 T1843 T1842 auxpass was,opened
R1213 T1844 T1842 advmod then,opened
R1214 T1845 T1842 prep at,opened
R1215 T1846 T1847 det the,site
R1216 T1847 T1845 pobj site,at
R1217 T1848 T1847 compound BamHI,site
R1218 T1849 T1847 acl introduced,site
R1219 T1850 T1849 agent by,introduced
R1220 T1851 T1852 det the,primer
R1221 T1852 T1850 pobj primer,by
R1222 T1853 T1852 compound intron,primer
R1223 T1854 T1852 compound cloning,primer
R1224 T1855 T1842 punct ", ",opened
R1225 T1856 T1842 cc and,opened
R1226 T1857 T1842 conj ligated,opened
R1227 T1858 T1857 prep to,ligated
R1228 T1859 T1860 det the,fragment
R1229 T1860 T1858 pobj fragment,to
R1230 T1861 T1862 nummod 0.5,kb
R1231 T1862 T1860 compound kb,fragment
R1232 T1863 T1862 punct -,kb
R1233 T1864 T1865 compound BamHI,cut
R1234 T1865 T1860 compound cut,fragment
R1235 T1866 T1865 punct -,cut
R1236 T1867 T1868 compound tetracycline,promoter
R1237 T1868 T1860 compound promoter,fragment
R1238 T1869 T1842 punct .,opened
R1239 T1871 T1872 det This,ligation
R1240 T1872 T1873 nsubj ligation,generated
R1241 T1874 T1875 det a,vector
R1242 T1875 T1873 dobj vector,generated
R1243 T1876 T1877 nummod 9.3,kb
R1244 T1877 T1875 compound kb,vector
R1245 T1878 T1877 punct -,kb
R1246 T1879 T1875 acl encoding,vector
R1247 T1880 T1881 det the,promoter
R1248 T1881 T1879 dobj promoter,encoding
R1249 T1882 T1881 compound tetracycline,promoter
R1250 T1883 T1881 prep from,promoter
R1251 T1884 T1883 pobj pTetSplice,from
R1252 T1885 T1879 prep with,encoding
R1253 T1886 T1887 nummod two,exons
R1254 T1887 T1885 pobj exons,with
R1255 T1888 T1887 punct ", ",exons
R1256 T1889 T1890 nummod one,intron
R1257 T1890 T1887 conj intron,exons
R1258 T1891 T1890 punct ", ",intron
R1259 T1892 T1890 cc and,intron
R1260 T1893 T1894 det the,UTR
R1261 T1894 T1890 conj UTR,intron
R1262 T1895 T1894 amod original,UTR
R1263 T1896 T1894 nummod 3,UTR
R1264 T1897 T1896 punct ′,3
R1265 T1898 T1894 prep of,UTR
R1266 T1899 T1900 det the,vector
R1267 T1900 T1898 pobj vector,of
R1268 T1901 T1900 compound moPrP.XhoI,vector
R1269 T1902 T1887 punct ", ",exons
R1270 T1903 T1904 advmod all,carried
R1271 T1904 T1887 acl carried,exons
R1272 T1905 T1904 prep in,carried
R1273 T1906 T1907 det the,vector
R1274 T1907 T1905 pobj vector,in
R1275 T1908 T1909 compound pBluescript,cloning
R1276 T1909 T1907 compound cloning,vector
R1277 T1910 T1873 punct .,generated
R1278 T1912 T1913 nsubj We,incorporated
R1279 T1913 T1914 ccomp incorporated,generated
R1280 T1915 T1916 det the,mutations
R1281 T1916 T1913 dobj mutations,incorporated
R1282 T1917 T1916 amod Swedish,mutations
R1283 T1918 T1919 punct (,571NL
R1284 T1919 T1917 parataxis 571NL,Swedish
R1285 T1920 T1919 compound KM570,571NL
R1286 T1921 T1919 punct /,571NL
R1287 T1922 T1919 punct ),571NL
R1288 T1923 T1917 cc and,Swedish
R1289 T1924 T1917 conj Indiana,Swedish
R1290 T1925 T1926 punct (,V617F
R1291 T1926 T1924 parataxis V617F,Indiana
R1292 T1927 T1926 punct ),V617F
R1293 T1928 T1913 prep into,incorporated
R1294 T1929 T1930 det the,cDNA
R1295 T1930 T1928 pobj cDNA,into
R1296 T1931 T1932 compound mo,huAPP695
R1297 T1932 T1930 compound huAPP695,cDNA
R1298 T1933 T1932 punct /,huAPP695
R1299 T1934 T1930 punct (,cDNA
R1300 T1935 T1930 prep in,cDNA
R1301 T1936 T1937 compound BS,KS
R1302 T1937 T1935 pobj KS,in
R1303 T1938 T1937 punct -,KS
R1304 T1939 T1913 punct ),incorporated
R1305 T1940 T1913 prep by,incorporated
R1306 T1941 T1940 pobj PCR,by
R1307 T1942 T1913 advcl using,incorporated
R1308 T1943 T1944 det a,strategy
R1309 T1944 T1942 dobj strategy,using
R1310 T1945 T1946 nummod four,primer
R1311 T1946 T1944 compound primer,strategy
R1312 T1947 T1946 punct -,primer
R1313 T1948 T1914 punct : ,generated
R1314 T1949 T1914 advmod first,generated
R1315 T1950 T1914 punct ", ",generated
R1316 T1951 T1952 nummod two,products
R1317 T1952 T1914 nsubjpass products,generated
R1318 T1953 T1954 advmod partially,overlapping
R1319 T1954 T1952 amod overlapping,products
R1320 T1955 T1914 auxpass were,generated
R1321 T1956 T1914 prep in,generated
R1322 T1957 T1958 amod separate,reactions
R1323 T1958 T1956 pobj reactions,in
R1324 T1959 T1914 advcl using,generated
R1325 T1960 T1959 dobj primers,using
R1326 T1961 T1962 dep that,encode
R1327 T1962 T1960 relcl encode,primers
R1328 T1963 T1964 det the,mutations
R1329 T1964 T1962 dobj mutations,encode
R1330 T1965 T1964 amod desired,mutations
R1331 T1966 T1967 punct (,M13
R1332 T1967 T1962 parataxis M13,encode
R1333 T1968 T1969 compound Swedish,forward
R1334 T1969 T1970 dep forward,CCG
R1335 T1970 T1983 dep CCG,C
R1336 T1971 T1970 punct : ,CCG
R1337 T1972 T1970 compound GGA,CCG
R1338 T1973 T1970 compound GAT,CCG
R1339 T1974 T1970 compound CTC,CCG
R1340 T1975 T1970 compound TGA,CCG
R1341 T1976 T1970 compound AGT,CCG
R1342 T1977 T1970 compound GAA,CCG
R1343 T1978 T1970 compound TCT,CCG
R1344 T1979 T1970 compound GGA,CCG
R1345 T1980 T1970 compound TGC,CCG
R1346 T1981 T1970 compound AGA,CCG
R1347 T1982 T1970 compound ATT,CCG
R1348 T1983 T1967 dep C,M13
R1349 T1984 T1983 punct /,C
R1350 T1985 T1986 compound Indiana,reverse
R1351 T1986 T1983 dep reverse,C
R1352 T1987 T1983 punct : ,C
R1353 T1988 T1983 compound GGG,C
R1354 T1989 T1983 compound TGA,C
R1355 T1990 T1983 compound TGA,C
R1356 T1991 T1983 compound AAA,C
R1357 T1992 T1983 compound TCA,C
R1358 T1993 T1983 compound CGG,C
R1359 T1994 T1983 compound TTG,C
R1360 T1995 T1967 punct ;,M13
R1361 T1996 T1997 compound Indiana,forward
R1362 T1997 T1967 dep forward,M13
R1363 T1998 T1967 punct : ,M13
R1364 T1999 T1967 compound CAA,M13
R1365 T2000 T1967 compound CCG,M13
R1366 T2001 T1967 compound TGA,M13
R1367 T2002 T1967 compound TTT,M13
R1368 T2003 T1967 compound TCA,M13
R1369 T2004 T1967 compound TCA,M13
R1370 T2005 T1967 compound CCC,M13
R1371 T2006 T1967 compound TGG,M13
R1372 T2007 T1967 punct /,M13
R1373 T2008 T1967 advmod reverse,M13
R1374 T2009 T1967 punct ),M13
R1375 T2010 T1914 punct .,generated
R1376 T2012 T2013 det The,products
R1377 T2013 T2016 nsubjpass products,ligated
R1378 T2014 T2013 nummod two,products
R1379 T2015 T2013 compound PCR,products
R1380 T2017 T2016 auxpass were,ligated
R1381 T2018 T2016 punct ", ",ligated
R1382 T2019 T2016 dep digested,ligated
R1383 T2020 T2016 prep with,ligated
R1384 T2021 T2020 pobj BglII,with
R1385 T2022 T2021 cc and,BglII
R1386 T2023 T2021 conj ApaI,BglII
R1387 T2024 T2016 cc and,ligated
R1388 T2025 T2016 conj cloned,ligated
R1389 T2026 T2025 advmod back,cloned
R1390 T2027 T2025 prep into,cloned
R1391 T2028 T2029 det the,vector
R1392 T2029 T2027 pobj vector,into
R1393 T2030 T2029 amod original,vector
R1394 T2031 T2032 compound mo,KS
R1395 T2032 T2029 compound KS,vector
R1396 T2033 T2032 punct /,KS
R1397 T2034 T2032 compound huAPP695,KS
R1398 T2035 T2032 punct -,KS
R1399 T2036 T2032 compound BS,KS
R1400 T2037 T2032 punct -,KS
R1401 T2038 T2016 punct .,ligated
R1402 T2040 T2041 advmod Finally,subcloned
R1403 T2042 T2041 punct ", ",subcloned
R1404 T2043 T2044 det the,ind
R1405 T2044 T2041 nsubjpass ind,subcloned
R1406 T2045 T2044 amod new,ind
R1407 T2046 T2044 compound APP695swe,ind
R1408 T2047 T2044 punct /,ind
R1409 T2048 T2041 auxpass was,subcloned
R1410 T2049 T2041 prep into,subcloned
R1411 T2050 T2051 det the,site
R1412 T2051 T2049 pobj site,into
R1413 T2052 T2051 compound XhoI,site
R1414 T2053 T2051 prep of,site
R1415 T2054 T2055 det the,vector
R1416 T2055 T2053 pobj vector,of
R1417 T2056 T2057 compound moPrP,tetP
R1418 T2057 T2055 compound tetP,vector
R1419 T2058 T2057 punct -,tetP
R1420 T2059 T2041 prep from,subcloned
R1421 T2060 T2059 pcomp above,from
R1422 T2061 T2062 aux to,complete
R1423 T2062 T2041 advcl complete,subcloned
R1424 T2063 T2064 det the,construct
R1425 T2064 T2062 dobj construct,complete
R1426 T2065 T2041 punct .,subcloned
R1427 T2158 T2159 amod Pronuclear,Injection
R1428 T2160 T2159 punct ", ",Injection
R1429 T2161 T2159 conj Screening,Injection
R1430 T2162 T2161 prep of,Screening
R1431 T2163 T2162 pobj Founders,of
R1432 T2164 T2161 punct ", ",Screening
R1433 T2165 T2161 cc and,Screening
R1434 T2166 T2161 conj Maintenance,Screening
R1435 T2167 T2166 prep of,Maintenance
R1436 T2168 T2169 det the,Lines
R1437 T2169 T2167 pobj Lines,of
R1438 T2171 T2172 det The,vector
R1439 T2172 T2182 nsubjpass vector,linearized
R1440 T2173 T2174 compound moPrP,ind
R1441 T2174 T2172 compound ind,vector
R1442 T2175 T2174 punct -,ind
R1443 T2176 T2174 compound tetP,ind
R1444 T2177 T2174 punct -,ind
R1445 T2178 T2174 compound mo,ind
R1446 T2179 T2174 punct /,ind
R1447 T2180 T2174 compound huAPP695swe,ind
R1448 T2181 T2174 punct /,ind
R1449 T2183 T2182 auxpass was,linearized
R1450 T2184 T2182 cc and,linearized
R1451 T2185 T2186 det the,domain
R1452 T2186 T2188 nsubj domain,excised
R1453 T2187 T2186 compound pBluescript,domain
R1454 T2188 T2182 conj excised,linearized
R1455 T2189 T2188 prep by,excised
R1456 T2190 T2189 pobj digestion,by
R1457 T2191 T2190 prep with,digestion
R1458 T2192 T2191 pobj NotI,with
R1459 T2193 T2188 punct .,excised
R1460 T2195 T2196 det The,vector
R1461 T2196 T2198 nsubjpass vector,injected
R1462 T2197 T2196 amod purified,vector
R1463 T2199 T2198 auxpass was,injected
R1464 T2200 T2198 prep into,injected
R1465 T2201 T2202 det the,pronucleus
R1466 T2202 T2200 pobj pronucleus,into
R1467 T2203 T2202 prep of,pronucleus
R1468 T2204 T2205 amod fertilized,eggs
R1469 T2205 T2203 pobj eggs,of
R1470 T2206 T2205 prep from,eggs
R1471 T2207 T2208 nmod C57BL,C3HeJ
R1472 T2208 T2212 compound C3HeJ,matings
R1473 T2209 T2208 punct /,C3HeJ
R1474 T2210 T2208 nmod 6J,C3HeJ
R1475 T2211 T2208 punct ×,C3HeJ
R1476 T2212 T2206 pobj matings,from
R1477 T2213 T2212 compound F1,matings
R1478 T2214 T2198 punct .,injected
R1479 T2216 T2217 compound Founder,animals
R1480 T2217 T2218 nsubjpass animals,screened
R1481 T2219 T2218 auxpass were,screened
R1482 T2220 T2218 prep for,screened
R1483 T2221 T2222 det the,presence
R1484 T2222 T2220 pobj presence,for
R1485 T2223 T2222 prep of,presence
R1486 T2224 T2225 det the,transgene
R1487 T2225 T2223 pobj transgene,of
R1488 T2226 T2218 prep by,screened
R1489 T2227 T2228 nummod three,way
R1490 T2228 T2230 compound way,PCR
R1491 T2229 T2228 punct -,way
R1492 T2230 T2226 pobj PCR,by
R1493 T2231 T2218 advcl using,screened
R1494 T2232 T2233 det the,primers
R1495 T2233 T2231 dobj primers,using
R1496 T2234 T2233 nmod S36,primers
R1497 T2235 T2234 cc and,S36
R1498 T2236 T2237 compound PrP,AS
R1499 T2237 T2234 conj AS,S36
R1500 T2238 T2237 punct -,AS
R1501 T2239 T2237 compound S,AS
R1502 T2240 T2237 punct /,AS
R1503 T2241 T2237 compound PrP,AS
R1504 T2242 T2237 punct -,AS
R1505 T2243 T2233 acl described,primers
R1506 T2244 T2243 advmod below,described
R1507 T2245 T2218 punct .,screened
R1508 T2247 T2248 npadvmod Transgene,positive
R1509 T2248 T2250 amod positive,founders
R1510 T2249 T2248 punct -,positive
R1511 T2250 T2251 nsubjpass founders,bred
R1512 T2252 T2251 auxpass were,bred
R1513 T2253 T2251 prep to,bred
R1514 T2254 T2253 pobj animals,to
R1515 T2255 T2254 acl expressing,animals
R1516 T2256 T2257 det the,transactivator
R1517 T2257 T2255 dobj transactivator,expressing
R1518 T2258 T2257 compound tetracycline,transactivator
R1519 T2259 T2257 punct (,transactivator
R1520 T2260 T2257 appos tTA,transactivator
R1521 T2261 T2251 punct ),bred
R1522 T2262 T2251 prep under,bred
R1523 T2263 T2262 pobj control,under
R1524 T2264 T2263 prep of,control
R1525 T2265 T2266 det the,promoter
R1526 T2266 T2264 pobj promoter,of
R1527 T2267 T2268 nmod calcium,calmodulin
R1528 T2268 T2270 nmod calmodulin,IIα
R1529 T2269 T2268 punct -,calmodulin
R1530 T2270 T2266 nmod IIα,promoter
R1531 T2271 T2270 nmod kinase,IIα
R1532 T2272 T2266 punct (,promoter
R1533 T2273 T2266 nmod CaMKIIα,promoter
R1534 T2274 T2266 punct ),promoter
R1535 T2275 T2266 acl obtained,promoter
R1536 T2276 T2275 prep from,obtained
R1537 T2277 T2278 compound Jackson,Laboratory
R1538 T2278 T2276 pobj Laboratory,from
R1539 T2279 T2280 punct [,16
R1540 T2280 T2278 parataxis 16,Laboratory
R1541 T2281 T2280 punct ],16
R1542 T2282 T2283 punct (,Harbor
R1543 T2283 T2275 parataxis Harbor,obtained
R1544 T2284 T2283 compound Bar,Harbor
R1545 T2285 T2283 punct ", ",Harbor
R1546 T2286 T2283 npadvmod Maine,Harbor
R1547 T2287 T2283 punct ", ",Harbor
R1548 T2288 T2289 compound United,States
R1549 T2289 T2283 npadvmod States,Harbor
R1550 T2290 T2283 punct ;,Harbor
R1551 T2291 T2292 dep stock,1Mmay
R1552 T2292 T2283 dep 1Mmay,Harbor
R1553 T2293 T2291 punct #,stock
R1554 T2294 T2291 nummod 3010,stock
R1555 T2295 T2292 punct ;,1Mmay
R1556 T2296 T2292 dep B6,1Mmay
R1557 T2297 T2292 punct ;,1Mmay
R1558 T2298 T2292 nmod CBA,1Mmay
R1559 T2299 T2292 punct -,1Mmay
R1560 T2300 T2292 nmod TgN,1Mmay
R1561 T2301 T2292 punct [,1Mmay
R1562 T2302 T2292 nmod Camk2a,1Mmay
R1563 T2303 T2292 punct -,1Mmay
R1564 T2304 T2292 nmod tTA,1Mmay
R1565 T2305 T2292 punct ],1Mmay
R1566 T2306 T2283 punct ),Harbor
R1567 T2307 T2251 punct .,bred
R1568 T2309 T2310 det The,colony
R1569 T2310 T2311 nsubjpass colony,maintained
R1570 T2312 T2311 auxpass was,maintained
R1571 T2313 T2311 advmod thereafter,maintained
R1572 T2314 T2311 prep by,maintained
R1573 T2315 T2314 pcomp crossing,by
R1574 T2316 T2317 amod single,offspring
R1575 T2317 T2315 dobj offspring,crossing
R1576 T2318 T2317 amod transgenic,offspring
R1577 T2319 T2317 nmod tTA,offspring
R1578 T2320 T2319 cc and,tTA
R1579 T2321 T2319 conj APP,tTA
R1580 T2322 T2315 prep for,crossing
R1581 T2323 T2322 pobj each,for
R1582 T2324 T2323 prep of,each
R1583 T2325 T2326 det the,lines
R1584 T2326 T2324 pobj lines,of
R1585 T2327 T2326 nummod four,lines
R1586 T2328 T2326 compound APP,lines
R1587 T2329 T2311 punct .,maintained
R1588 T2331 T2332 det All,mice
R1589 T2332 T2333 nsubjpass mice,provided
R1590 T2334 T2333 auxpass were,provided
R1591 T2335 T2336 amod fresh,food
R1592 T2336 T2333 dobj food,provided
R1593 T2337 T2336 cc and,food
R1594 T2338 T2336 conj water,food
R1595 T2339 T2340 advmod ad,libitum
R1596 T2340 T2333 advmod libitum,provided
R1597 T2341 T2333 punct .,provided
R1598 T2343 T2344 compound Animal,protocols
R1599 T2344 T2345 nsubjpass protocols,approved
R1600 T2346 T2345 auxpass were,approved
R1601 T2347 T2345 agent by,approved
R1602 T2348 T2349 det both,University
R1603 T2349 T2353 nmod University,Committees
R1604 T2350 T2349 det the,University
R1605 T2351 T2349 nmod Johns,University
R1606 T2352 T2349 nmod Hopkins,University
R1607 T2353 T2347 pobj Committees,by
R1608 T2354 T2349 cc and,University
R1609 T2355 T2356 det the,Institute
R1610 T2356 T2349 conj Institute,University
R1611 T2357 T2356 compound California,Institute
R1612 T2358 T2356 prep of,Institute
R1613 T2359 T2358 pobj Technology,of
R1614 T2360 T2361 nmod Institutional,Animal
R1615 T2361 T2353 nmod Animal,Committees
R1616 T2362 T2361 appos Care,Animal
R1617 T2363 T2362 cc and,Care
R1618 T2364 T2362 conj Use,Care
R1619 T2365 T2345 punct .,approved
R1622 T2408 T2409 compound Doxycycline,Administration
R1623 T2411 T2412 nsubjpass Doxycycline,administered
R1624 T2413 T2411 punct (,Doxycycline
R1625 T2414 T2411 appos dox,Doxycycline
R1626 T2415 T2411 punct ),Doxycycline
R1627 T2416 T2412 auxpass was,administered
R1628 T2417 T2412 prep through,administered
R1629 T2418 T2419 advmod commercially,available
R1630 T2419 T2420 amod available,chow
R1631 T2420 T2417 pobj chow,through
R1632 T2421 T2422 npadvmod dox,containing
R1633 T2422 T2420 amod containing,chow
R1634 T2423 T2422 punct -,containing
R1635 T2424 T2425 punct (,BioServ
R1636 T2425 T2412 parataxis BioServ,administered
R1637 T2426 T2425 punct ", ",BioServ
R1638 T2427 T2425 npadvmod Frenchtown,BioServ
R1639 T2428 T2425 punct ", ",BioServ
R1640 T2429 T2430 compound New,Jersey
R1641 T2430 T2425 npadvmod Jersey,BioServ
R1642 T2431 T2425 punct ", ",BioServ
R1643 T2432 T2433 compound United,States
R1644 T2433 T2425 npadvmod States,BioServ
R1645 T2434 T2425 punct ),BioServ
R1646 T2435 T2412 punct .,administered
R1647 T2437 T2438 det The,chow
R1648 T2438 T2439 nsubj chow,contained
R1649 T2439 T2440 ccomp contained,was
R1650 T2441 T2442 nummod 200,mg
R1651 T2442 T2439 dobj mg,contained
R1652 T2443 T2444 punct /,kg
R1653 T2444 T2442 prep kg,mg
R1654 T2445 T2442 prep of,mg
R1655 T2446 T2445 pobj antibiotic,of
R1656 T2447 T2440 punct ;,was
R1657 T2448 T2440 prep based,was
R1658 T2449 T2448 prep on,based
R1659 T2450 T2451 amod estimated,consumption
R1660 T2451 T2449 pobj consumption,on
R1661 T2452 T2451 prep of,consumption
R1662 T2453 T2454 nummod 5,g
R1663 T2454 T2452 pobj g,of
R1664 T2455 T2454 prep per,g
R1665 T2456 T2455 pobj mouse,per
R1666 T2457 T2454 prep per,g
R1667 T2458 T2457 pobj day,per
R1668 T2459 T2440 punct ", ",was
R1669 T2460 T2461 det the,dose
R1670 T2461 T2440 nsubj dose,was
R1671 T2462 T2461 amod expected,dose
R1672 T2463 T2461 prep to,dose
R1673 T2464 T2465 det each,animal
R1674 T2465 T2463 pobj animal,to
R1675 T2466 T2467 nummod 1,mg
R1676 T2467 T2468 compound mg,dox
R1677 T2468 T2440 attr dox,was
R1678 T2469 T2468 prep per,dox
R1679 T2470 T2469 pobj day,per
R1680 T2471 T2440 punct .,was
R1681 T2473 T2474 det The,animal
R1682 T2474 T2479 nsubj animal,received
R1683 T2475 T2474 amod average,animal
R1684 T2476 T2477 nummod 25,g
R1685 T2477 T2474 compound g,animal
R1686 T2478 T2477 punct -,g
R1687 T2480 T2479 advmod therefore,received
R1688 T2481 T2482 nummod 40,μg
R1689 T2482 T2479 dobj μg,received
R1690 T2483 T2482 prep of,μg
R1691 T2484 T2483 pobj dox,of
R1692 T2485 T2482 prep per,μg
R1693 T2486 T2487 compound gram,weight
R1694 T2487 T2485 pobj weight,per
R1695 T2488 T2487 compound body,weight
R1696 T2489 T2482 prep per,μg
R1697 T2490 T2489 pobj day,per
R1698 T2491 T2479 punct .,received
R1699 T2493 T2494 nsubjpass Chow,changed
R1700 T2495 T2494 auxpass was,changed
R1701 T2496 T2497 quantmod 1,2
R1702 T2497 T2499 nummod 2,times
R1703 T2498 T2497 punct –,2
R1704 T2499 T2494 npadvmod times,changed
R1705 T2500 T2499 prep per,times
R1706 T2501 T2500 pobj week,per
R1707 T2502 T2503 aux to,prevent
R1708 T2503 T2494 advcl prevent,changed
R1709 T2504 T2503 dobj breakdown,prevent
R1710 T2505 T2504 prep of,breakdown
R1711 T2506 T2507 det the,antibiotic
R1712 T2507 T2505 pobj antibiotic,of
R1713 T2508 T2494 punct .,changed
R1718 T2637 T2638 nsubjpass Offspring,genotyped
R1719 T2639 T2638 auxpass were,genotyped
R1720 T2640 T2638 prep for,genotyped
R1721 T2641 T2642 det the,presence
R1722 T2642 T2640 pobj presence,for
R1723 T2643 T2642 prep of,presence
R1724 T2644 T2645 det each,transgene
R1725 T2645 T2643 pobj transgene,of
R1726 T2646 T2638 prep by,genotyped
R1727 T2647 T2648 compound PCR,amplification
R1728 T2648 T2646 pobj amplification,by
R1729 T2649 T2648 prep of,amplification
R1730 T2650 T2651 amod genomic,DNA
R1731 T2651 T2649 pobj DNA,of
R1732 T2652 T2651 acl extracted,DNA
R1733 T2653 T2652 prep from,extracted
R1734 T2654 T2655 det a,biopsy
R1735 T2655 T2653 pobj biopsy,from
R1736 T2656 T2657 nummod 5,mm
R1737 T2657 T2655 compound mm,biopsy
R1738 T2658 T2657 punct -,mm
R1739 T2659 T2655 compound tail,biopsy
R1740 T2660 T2638 punct .,genotyped
R1741 T2662 T2663 nsubjpass Tails,heated
R1742 T2664 T2663 auxpass were,heated
R1743 T2665 T2663 prep to,heated
R1744 T2666 T2667 nummod 95,°C
R1745 T2667 T2665 pobj °C,to
R1746 T2668 T2663 prep for,heated
R1747 T2669 T2670 nummod 45,min
R1748 T2670 T2668 pobj min,for
R1749 T2671 T2663 prep in,heated
R1750 T2672 T2673 nummod 250,μl
R1751 T2673 T2671 pobj μl,in
R1752 T2674 T2673 prep of,μl
R1753 T2675 T2676 nummod 50,mM
R1754 T2676 T2677 compound mM,NaOH
R1755 T2677 T2674 pobj NaOH,of
R1756 T2678 T2663 punct ", ",heated
R1757 T2679 T2663 dep vortexed,heated
R1758 T2680 T2663 punct ", ",heated
R1759 T2681 T2682 advmod then,neutralized
R1760 T2682 T2663 dep neutralized,heated
R1761 T2683 T2682 prep with,neutralized
R1762 T2684 T2685 det an,volume
R1763 T2685 T2683 pobj volume,with
R1764 T2686 T2685 amod equal,volume
R1765 T2687 T2685 prep of,volume
R1766 T2688 T2689 nummod 0.5,M
R1767 T2689 T2690 compound M,HCl
R1768 T2690 T2687 pobj HCl,of
R1769 T2691 T2690 compound Tris,HCl
R1770 T2692 T2690 punct -,HCl
R1771 T2693 T2694 punct (,pH
R1772 T2694 T2690 parataxis pH,HCl
R1773 T2695 T2694 nummod 5.5,pH
R1774 T2696 T2694 punct ),pH
R1775 T2697 T2663 punct .,heated
R1776 T2699 T2700 nsubjpass Debris,sedimented
R1777 T2701 T2700 auxpass was,sedimented
R1778 T2702 T2700 prep by,sedimented
R1779 T2703 T2702 pobj centrifugation,by
R1780 T2704 T2700 punct ", ",sedimented
R1781 T2705 T2700 cc and,sedimented
R1782 T2706 T2707 nummod 3,μl
R1783 T2707 T2708 nsubjpass μl,used
R1784 T2708 T2700 conj used,sedimented
R1785 T2709 T2707 prep of,μl
R1786 T2710 T2709 pobj supernatant,of
R1787 T2711 T2708 auxpass was,used
R1788 T2712 T2708 prep for,used
R1789 T2713 T2712 pobj amplification,for
R1790 T2714 T2708 punct .,used
R1791 T2716 T2717 nsubjpass Genotyping,performed
R1792 T2718 T2716 prep for,Genotyping
R1793 T2719 T2720 nmod APP,transgenes
R1794 T2720 T2718 pobj transgenes,for
R1795 T2721 T2719 cc and,APP
R1796 T2722 T2719 conj tTA,APP
R1797 T2723 T2717 auxpass was,performed
R1798 T2724 T2717 prep in,performed
R1799 T2725 T2726 det the,reaction
R1800 T2726 T2724 pobj reaction,in
R1801 T2727 T2726 amod same,reaction
R1802 T2728 T2726 compound PCR,reaction
R1803 T2729 T2717 punct ", ",performed
R1804 T2730 T2717 advcl using,performed
R1805 T2731 T2732 nummod five,primers
R1806 T2732 T2730 dobj primers,using
R1807 T2733 T2732 amod separate,primers
R1808 T2734 T2717 punct .,performed
R1809 T2736 T2737 nsubjpass APP,amplified
R1810 T2738 T2737 auxpass was,amplified
R1811 T2739 T2737 advcl using,amplified
R1812 T2740 T2741 advmod forward,S36
R1813 T2741 T2739 dobj S36,using
R1814 T2742 T2741 compound primer,S36
R1815 T2743 T2741 acl located,S36
R1816 T2744 T2743 prep in,located
R1817 T2745 T2746 det the,end
R1818 T2746 T2744 pobj end,in
R1819 T2747 T2746 nummod 3,end
R1820 T2748 T2747 punct ′,3
R1821 T2749 T2746 prep of,end
R1822 T2750 T2751 det the,cDNA
R1823 T2751 T2749 pobj cDNA,of
R1824 T2752 T2751 compound APP,cDNA
R1825 T2753 T2754 punct (,ATG
R1826 T2754 T2751 parataxis ATG,cDNA
R1827 T2755 T2754 compound CCG,ATG
R1828 T2756 T2754 compound AGA,ATG
R1829 T2757 T2754 compound TCT,ATG
R1830 T2758 T2754 compound CTG,ATG
R1831 T2759 T2754 compound AAG,ATG
R1832 T2760 T2754 compound TGA,ATG
R1833 T2761 T2754 compound AGA,ATG
R1834 T2762 T2754 compound TGG,ATG
R1835 T2763 T2754 punct ),ATG
R1836 T2764 T2741 cc and,S36
R1837 T2765 T2766 amod reverse,J
R1838 T2766 T2741 conj J,S36
R1839 T2767 T2766 compound primer,J
R1840 T2768 T2766 compound PrP,J
R1841 T2769 T2766 punct -,J
R1842 T2770 T2766 compound AS,J
R1843 T2771 T2766 punct -,J
R1844 T2772 T2766 acl located,J
R1845 T2773 T2772 prep in,located
R1846 T2774 T2775 det the,UTR
R1847 T2775 T2773 pobj UTR,in
R1848 T2776 T2775 nummod 3,UTR
R1849 T2777 T2776 punct ′,3
R1850 T2778 T2775 prep of,UTR
R1851 T2779 T2780 det the,vector
R1852 T2780 T2778 pobj vector,of
R1853 T2781 T2782 punct (,GC
R1854 T2782 T2775 parataxis GC,UTR
R1855 T2783 T2782 compound CCA,GC
R1856 T2784 T2782 compound AGC,GC
R1857 T2785 T2782 compound CTA,GC
R1858 T2786 T2782 compound GAC,GC
R1859 T2787 T2782 compound CAC,GC
R1860 T2788 T2782 compound GAG,GC
R1861 T2789 T2782 compound AAT,GC
R1862 T2790 T2782 punct ),GC
R1863 T2791 T2737 punct .,amplified
R1864 T2793 T2794 det The,transgene
R1865 T2794 T2796 nsubjpass transgene,detected
R1866 T2795 T2794 compound tTA,transgene
R1867 T2797 T2796 auxpass was,detected
R1868 T2798 T2796 advcl using,detected
R1869 T2799 T2800 det a,set
R1870 T2800 T2798 dobj set,using
R1871 T2801 T2800 compound primer,set
R1872 T2802 T2803 dep that,amplified
R1873 T2803 T2800 relcl amplified,set
R1874 T2804 T2803 prep across,amplified
R1875 T2805 T2806 poss its,subdomains
R1876 T2806 T2804 pobj subdomains,across
R1877 T2807 T2806 nummod two,subdomains
R1878 T2808 T2803 prep with,amplified
R1879 T2809 T2808 pobj tet,with
R1880 T2810 T2809 advmod forward,tet
R1881 T2811 T2809 acl located,tet
R1882 T2812 T2811 prep within,located
R1883 T2813 T2814 det the,repressor
R1884 T2814 T2812 pobj repressor,within
R1885 T2815 T2816 compound Tn10,tetracycline
R1886 T2816 T2814 compound tetracycline,repressor
R1887 T2817 T2818 punct (,AG
R1888 T2818 T2814 parataxis AG,repressor
R1889 T2819 T2818 compound CGC,AG
R1890 T2820 T2818 compound TGT,AG
R1891 T2821 T2818 compound GGG,AG
R1892 T2822 T2818 compound GCA,AG
R1893 T2823 T2818 compound TTT,AG
R1894 T2824 T2818 compound TAC,AG
R1895 T2825 T2818 compound TTT,AG
R1896 T2826 T2818 punct ),AG
R1897 T2827 T2809 cc and,tet
R1898 T2828 T2809 conj tet,tet
R1899 T2829 T2828 amod reverse,tet
R1900 T2830 T2828 prep within,tet
R1901 T2831 T2832 det the,VP16
R1902 T2832 T2830 pobj VP16,within
R1903 T2833 T2832 compound HSV1,VP16
R1904 T2834 T2835 punct (,GTC
R1905 T2835 T2832 parataxis GTC,VP16
R1906 T2836 T2835 compound CAT,GTC
R1907 T2837 T2835 compound GTC,GTC
R1908 T2838 T2835 compound CAG,GTC
R1909 T2839 T2835 compound ATC,GTC
R1910 T2840 T2835 compound GAA,GTC
R1911 T2841 T2835 compound ATC,GTC
R1912 T2842 T2835 punct ),GTC
R1913 T2843 T2796 punct .,detected
R1914 T2845 T2846 det All,reactions
R1915 T2846 T2847 nsubj reactions,amplified
R1916 T2848 T2847 punct ", ",amplified
R1917 T2849 T2850 mark whether,positive
R1918 T2850 T2847 advcl positive,amplified
R1919 T2851 T2850 npadvmod transgene,positive
R1920 T2852 T2850 punct -,positive
R1921 T2853 T2850 cc or,positive
R1922 T2854 T2850 conj not,positive
R1923 T2855 T2847 punct ", ",amplified
R1924 T2856 T2857 det a,segment
R1925 T2857 T2847 dobj segment,amplified
R1926 T2858 T2857 prep of,segment
R1927 T2859 T2860 det the,gene
R1928 T2860 T2858 pobj gene,of
R1929 T2861 T2860 amod endogenous,gene
R1930 T2862 T2860 compound prion,gene
R1931 T2863 T2860 compound protein,gene
R1932 T2864 T2847 prep as,amplified
R1933 T2865 T2866 det a,control
R1934 T2866 T2864 pobj control,as
R1935 T2867 T2866 prep for,control
R1936 T2868 T2869 compound DNA,quality
R1937 T2869 T2867 pobj quality,for
R1938 T2870 T2847 advcl using,amplified
R1939 T2871 T2872 det a,primer
R1940 T2872 T2870 dobj primer,using
R1941 T2873 T2872 amod forward,primer
R1942 T2874 T2872 punct ", ",primer
R1943 T2875 T2876 compound PrP,J
R1944 T2876 T2872 appos J,primer
R1945 T2877 T2876 punct -,J
R1946 T2878 T2876 compound S,J
R1947 T2879 T2876 punct -,J
R1948 T2880 T2872 punct ", ",primer
R1949 T2881 T2872 amod specific,primer
R1950 T2882 T2881 prep to,specific
R1951 T2883 T2884 det the,frame
R1952 T2884 T2882 pobj frame,to
R1953 T2885 T2884 nmod mouse,frame
R1954 T2886 T2884 nmod PrP,frame
R1955 T2887 T2888 amod open,reading
R1956 T2888 T2884 compound reading,frame
R1957 T2889 T2890 punct (,GG
R1958 T2890 T2884 parataxis GG,frame
R1959 T2891 T2890 compound GGG,GG
R1960 T2892 T2890 compound ACT,GG
R1961 T2893 T2890 compound ATG,GG
R1962 T2894 T2890 compound TGG,GG
R1963 T2895 T2890 compound ACT,GG
R1964 T2896 T2890 compound GAT,GG
R1965 T2897 T2890 compound GTC,GG
R1966 T2898 T2890 punct ),GG
R1967 T2899 T2872 cc and,primer
R1968 T2900 T2901 det a,primer
R1969 T2901 T2872 conj primer,primer
R1970 T2902 T2901 amod reverse,primer
R1971 T2903 T2901 punct ", ",primer
R1972 T2904 T2905 compound PrP,J
R1973 T2905 T2901 appos J,primer
R1974 T2906 T2905 punct -,J
R1975 T2907 T2905 compound AS,J
R1976 T2908 T2905 punct -,J
R1977 T2909 T2901 punct ", ",primer
R1978 T2910 T2901 acl shared,primer
R1979 T2911 T2910 agent by,shared
R1980 T2912 T2913 det the,UTR
R1981 T2913 T2911 pobj UTR,by
R1982 T2914 T2913 nummod 3,UTR
R1983 T2915 T2914 punct ′,3
R1984 T2916 T2913 prep of,UTR
R1985 T2917 T2918 det the,gene
R1986 T2918 T2916 pobj gene,of
R1987 T2919 T2918 amod endogenous,gene
R1988 T2920 T2918 compound PrP,gene
R1989 T2921 T2918 cc and,gene
R1990 T2922 T2923 det the,vector
R1991 T2923 T2918 conj vector,gene
R1992 T2924 T2923 compound transgene,vector
R1993 T2925 T2847 punct .,amplified
R1994 T2927 T2928 compound Amplification,reactions
R1995 T2928 T2929 nsubjpass reactions,run
R1996 T2930 T2929 auxpass were,run
R1997 T2931 T2929 prep for,run
R1998 T2932 T2933 nummod 37,cycles
R1999 T2933 T2931 pobj cycles,for
R2000 T2934 T2929 prep at,run
R2001 T2935 T2936 nummod 94,°C
R2002 T2936 T2934 pobj °C,at
R2003 T2937 T2929 prep for,run
R2004 T2938 T2939 nummod 30,s
R2005 T2939 T2937 pobj s,for
R2006 T2940 T2929 punct ", ",run
R2007 T2941 T2942 nummod 64,°C
R2008 T2942 T2929 conj °C,run
R2009 T2943 T2942 prep for,°C
R2010 T2944 T2945 nummod 1,min
R2011 T2945 T2943 pobj min,for
R2012 T2946 T2942 punct ", ",°C
R2013 T2947 T2942 cc and,°C
R2014 T2948 T2949 nummod 72,°C
R2015 T2949 T2942 conj °C,°C
R2016 T2950 T2949 prep for,°C
R2017 T2951 T2952 nummod 1,min
R2018 T2952 T2950 pobj min,for
R2019 T2953 T2929 punct .,run
R2020 T2955 T2956 det All,samples
R2021 T2956 T2957 nsubj samples,gave
R2022 T2958 T2956 punct ", ",samples
R2023 T2959 T2956 amod transgenic,samples
R2024 T2960 T2959 cc and,transgenic
R2025 T2961 T2962 amod wild,type
R2026 T2962 T2959 conj type,transgenic
R2027 T2963 T2962 punct -,type
R2028 T2964 T2957 punct ", ",gave
R2029 T2965 T2966 det a,product
R2030 T2966 T2957 dobj product,gave
R2031 T2967 T2968 nummod 750,bp
R2032 T2968 T2966 compound bp,product
R2033 T2969 T2968 punct -,bp
R2034 T2970 T2966 prep from,product
R2035 T2971 T2972 det the,gene
R2036 T2972 T2970 pobj gene,from
R2037 T2973 T2972 amod endogenous,gene
R2038 T2974 T2972 compound PrP,gene
R2039 T2975 T2957 punct .,gave
R2040 T2977 T2978 det The,transgene
R2041 T2978 T2980 nsubj transgene,yielded
R2042 T2979 T2978 compound APP,transgene
R2043 T2980 T2981 ccomp yielded,fell
R2044 T2982 T2983 det an,band
R2045 T2983 T2980 dobj band,yielded
R2046 T2984 T2983 amod additional,band
R2047 T2985 T2983 prep at,band
R2048 T2986 T2987 nummod 400,bp
R2049 T2987 T2985 pobj bp,at
R2050 T2988 T2981 punct ;,fell
R2051 T2989 T2990 det the,product
R2052 T2990 T2981 nsubj product,fell
R2053 T2991 T2990 compound tTA,product
R2054 T2992 T2993 advmod in,between
R2055 T2993 T2981 advmod between,fell
R2056 T2994 T2981 prep at,fell
R2057 T2995 T2996 nummod 480,bp
R2058 T2996 T2994 pobj bp,at
R2059 T2997 T2981 punct .,fell
R2060 T3141 T3142 compound Immunoblotting,Quantitation
R2061 T3143 T3142 punct /,Quantitation
R2062 T3145 T3146 amod Frozen,tissue
R2063 T3146 T3151 nsubjpass tissue,homogenized
R2064 T3147 T3146 amod cortical,tissue
R2065 T3148 T3147 cc or,cortical
R2066 T3149 T3150 amod whole,forebrain
R2067 T3150 T3147 conj forebrain,cortical
R2068 T3152 T3151 auxpass was,homogenized
R2069 T3153 T3151 prep by,homogenized
R2070 T3154 T3153 pobj sonication,by
R2071 T3155 T3151 prep in,homogenized
R2072 T3156 T3157 nummod five,volumes
R2073 T3157 T3155 pobj volumes,in
R2074 T3158 T3157 prep of,volumes
R2075 T3159 T3160 npadvmod phosphate,buffered
R2076 T3160 T3162 amod buffered,saline
R2077 T3161 T3160 punct -,buffered
R2078 T3162 T3158 pobj saline,of
R2079 T3163 T3162 punct (,saline
R2080 T3164 T3162 appos PBS,saline
R2081 T3165 T3151 punct ),homogenized
R2082 T3166 T3151 prep with,homogenized
R2083 T3167 T3168 nummod 5,mM
R2084 T3168 T3169 nmod mM,inhibitors
R2085 T3169 T3166 pobj inhibitors,with
R2086 T3170 T3169 nmod EDTA,inhibitors
R2087 T3171 T3170 cc and,EDTA
R2088 T3172 T3170 conj protease,EDTA
R2089 T3173 T3174 punct (,cocktail
R2090 T3174 T3169 parataxis cocktail,inhibitors
R2091 T3175 T3174 amod Mammalian,cocktail
R2092 T3176 T3174 compound cell,cocktail
R2093 T3177 T3174 punct ", ",cocktail
R2094 T3178 T3174 npadvmod Sigma,cocktail
R2095 T3179 T3174 punct ", ",cocktail
R2096 T3180 T3181 compound St.,Louis
R2097 T3181 T3174 npadvmod Louis,cocktail
R2098 T3182 T3174 punct ", ",cocktail
R2099 T3183 T3174 npadvmod Missouri,cocktail
R2100 T3184 T3174 punct ", ",cocktail
R2101 T3185 T3186 compound United,States
R2102 T3186 T3174 npadvmod States,cocktail
R2103 T3187 T3174 punct ),cocktail
R2104 T3188 T3151 punct ", ",homogenized
R2105 T3189 T3151 advcl using,homogenized
R2106 T3190 T3191 det a,sonicator
R2107 T3191 T3189 dobj sonicator,using
R2108 T3192 T3191 compound probe,sonicator
R2109 T3193 T3191 acl set,sonicator
R2110 T3194 T3193 prep to,set
R2111 T3195 T3196 nummod 50,%
R2112 T3196 T3197 compound %,output
R2113 T3197 T3194 pobj output,to
R2114 T3198 T3199 punct (,TEKMAR
R2115 T3199 T3191 parataxis TEKMAR,sonicator
R2116 T3200 T3199 punct ", ",TEKMAR
R2117 T3201 T3199 npadvmod Cincinnati,TEKMAR
R2118 T3202 T3199 punct ", ",TEKMAR
R2119 T3203 T3199 npadvmod Ohio,TEKMAR
R2120 T3204 T3199 punct ", ",TEKMAR
R2121 T3205 T3206 compound United,States
R2122 T3206 T3199 npadvmod States,TEKMAR
R2123 T3207 T3199 punct ),TEKMAR
R2124 T3208 T3151 punct .,homogenized
R2125 T3210 T3211 prep After,centrifuged
R2126 T3212 T3210 pobj dilution,After
R2127 T3213 T3212 prep with,dilution
R2128 T3214 T3215 det an,volume
R2129 T3215 T3213 pobj volume,with
R2130 T3216 T3215 amod equal,volume
R2131 T3217 T3215 prep of,volume
R2132 T3218 T3219 compound PBS,protease
R2133 T3219 T3223 compound protease,inhibitor
R2134 T3220 T3219 punct /,protease
R2135 T3221 T3219 compound EDTA,protease
R2136 T3222 T3219 punct /,protease
R2137 T3223 T3217 pobj inhibitor,of
R2138 T3224 T3211 punct ", ",centrifuged
R2139 T3225 T3226 det the,samples
R2140 T3226 T3211 nsubjpass samples,centrifuged
R2141 T3227 T3211 auxpass were,centrifuged
R2142 T3228 T3211 advmod briefly,centrifuged
R2143 T3229 T3211 cc and,centrifuged
R2144 T3230 T3231 det the,supernatant
R2145 T3231 T3232 nsubj supernatant,used
R2146 T3232 T3211 conj used,centrifuged
R2147 T3233 T3232 prep for,used
R2148 T3234 T3233 pobj analysis,for
R2149 T3235 T3211 punct .,centrifuged
R2150 T3237 T3238 nummod Fifty,micrograms
R2151 T3238 T3239 nmod micrograms,6E10
R2152 T3239 T3241 nsubjpass 6E10,loaded
R2153 T3240 T3239 punct (,6E10
R2154 T3242 T3239 cc and,6E10
R2155 T3243 T3239 conj CT15,6E10
R2156 T3244 T3243 punct ),CT15
R2157 T3245 T3239 cc or,6E10
R2158 T3246 T3247 nummod 5,μg
R2159 T3247 T3248 nmod μg,22C11
R2160 T3248 T3239 conj 22C11,6E10
R2161 T3249 T3248 punct (,22C11
R2162 T3250 T3248 punct ),22C11
R2163 T3251 T3239 prep of,6E10
R2164 T3252 T3253 compound brain,homogenate
R2165 T3253 T3251 pobj homogenate,of
R2166 T3254 T3241 auxpass was,loaded
R2167 T3255 T3241 prep per,loaded
R2168 T3256 T3255 pobj lane,per
R2169 T3257 T3241 prep onto,loaded
R2170 T3258 T3259 nummod 7.5,%
R2171 T3259 T3260 nmod %,PAGE
R2172 T3260 T3277 compound PAGE,gels
R2173 T3261 T3259 punct ", ",%
R2174 T3262 T3263 nummod 10,%
R2175 T3263 T3259 conj %,%
R2176 T3264 T3265 punct –,%
R2177 T3265 T3263 prep %,%
R2178 T3266 T3265 nummod 20,%
R2179 T3267 T3263 punct ", ",%
R2180 T3268 T3263 cc or,%
R2181 T3269 T3270 nummod 4,%
R2182 T3270 T3263 conj %,%
R2183 T3271 T3272 punct –,%
R2184 T3272 T3270 prep %,%
R2185 T3273 T3272 nummod 20,%
R2186 T3274 T3260 compound Tris,PAGE
R2187 T3275 T3260 punct -,PAGE
R2188 T3276 T3260 compound HCl,PAGE
R2189 T3277 T3257 pobj gels,onto
R2190 T3278 T3279 punct (,Laboratories
R2191 T3279 T3277 parataxis Laboratories,gels
R2192 T3280 T3281 compound Bio,Rad
R2193 T3281 T3279 compound Rad,Laboratories
R2194 T3282 T3281 punct -,Rad
R2195 T3283 T3279 punct ", ",Laboratories
R2196 T3284 T3279 npadvmod Hercules,Laboratories
R2197 T3285 T3279 punct ", ",Laboratories
R2198 T3286 T3279 npadvmod California,Laboratories
R2199 T3287 T3279 punct ", ",Laboratories
R2200 T3288 T3289 compound United,States
R2201 T3289 T3279 npadvmod States,Laboratories
R2202 T3290 T3279 punct ),Laboratories
R2203 T3291 T3241 cc and,loaded
R2204 T3292 T3241 conj electrophoresed,loaded
R2205 T3293 T3292 prep for,electrophoresed
R2206 T3294 T3295 amod several,hours
R2207 T3295 T3293 pobj hours,for
R2208 T3296 T3292 prep in,electrophoresed
R2209 T3297 T3298 nummod 1,sulfate
R2210 T3298 T3306 nmod sulfate,buffer
R2211 T3299 T3297 punct ×,1
R2212 T3300 T3298 nmod Tris,sulfate
R2213 T3301 T3298 punct -,sulfate
R2214 T3302 T3298 nmod glycine,sulfate
R2215 T3303 T3298 punct –,sulfate
R2216 T3304 T3298 nmod sodium,sulfate
R2217 T3305 T3298 nmod dodecyl,sulfate
R2218 T3306 T3296 pobj buffer,in
R2219 T3307 T3298 punct (,sulfate
R2220 T3308 T3309 nummod 1,SDS
R2221 T3309 T3298 appos SDS,sulfate
R2222 T3310 T3308 punct ×,1
R2223 T3311 T3309 compound TG,SDS
R2224 T3312 T3309 punct -,SDS
R2225 T3313 T3306 punct ),buffer
R2226 T3314 T3315 punct (,Amresco
R2227 T3315 T3306 parataxis Amresco,buffer
R2228 T3316 T3315 dep 6E10,Amresco
R2229 T3317 T3316 cc and,6E10
R2230 T3318 T3316 conj 22C11,6E10
R2231 T3319 T3315 punct ;,Amresco
R2232 T3320 T3315 punct ", ",Amresco
R2233 T3321 T3315 npadvmod Solon,Amresco
R2234 T3322 T3315 punct ", ",Amresco
R2235 T3323 T3315 npadvmod Ohio,Amresco
R2236 T3324 T3315 punct ", ",Amresco
R2237 T3325 T3326 compound United,States
R2238 T3326 T3315 npadvmod States,Amresco
R2239 T3327 T3315 punct ),Amresco
R2240 T3328 T3306 cc or,buffer
R2241 T3329 T3330 nummod 1,buffer
R2242 T3330 T3306 conj buffer,buffer
R2243 T3331 T3329 punct ×,1
R2244 T3332 T3333 compound Tris,SDS
R2245 T3333 T3330 compound SDS,buffer
R2246 T3334 T3333 punct -,SDS
R2247 T3335 T3333 compound tricine,SDS
R2248 T3336 T3333 punct -,SDS
R2249 T3337 T3338 punct (,Invitrogen
R2250 T3338 T3330 parataxis Invitrogen,buffer
R2251 T3339 T3338 dep CT15,Invitrogen
R2252 T3340 T3338 punct ;,Invitrogen
R2253 T3341 T3338 punct ", ",Invitrogen
R2254 T3342 T3338 npadvmod Carlsbad,Invitrogen
R2255 T3343 T3338 punct ", ",Invitrogen
R2256 T3344 T3338 npadvmod California,Invitrogen
R2257 T3345 T3338 punct ", ",Invitrogen
R2258 T3346 T3347 compound United,States
R2259 T3347 T3338 npadvmod States,Invitrogen
R2260 T3348 T3338 punct ),Invitrogen
R2261 T3349 T3241 punct .,loaded
R2262 T3351 T3352 nsubjpass Proteins,transferred
R2263 T3353 T3352 auxpass were,transferred
R2264 T3354 T3352 advmod overnight,transferred
R2265 T3355 T3352 prep to,transferred
R2266 T3356 T3357 nummod 0.45,μm
R2267 T3357 T3359 compound μm,nitrocellulose
R2268 T3358 T3357 punct -,μm
R2269 T3359 T3355 pobj nitrocellulose,to
R2270 T3360 T3359 compound Optitran,nitrocellulose
R2271 T3361 T3362 punct (,Schleicher
R2272 T3362 T3359 parataxis Schleicher,nitrocellulose
R2273 T3363 T3362 cc and,Schleicher
R2274 T3364 T3362 conj Schuell,Schleicher
R2275 T3365 T3362 punct ", ",Schleicher
R2276 T3366 T3362 npadvmod Keene,Schleicher
R2277 T3367 T3362 punct ", ",Schleicher
R2278 T3368 T3369 compound New,Hampshire
R2279 T3369 T3362 npadvmod Hampshire,Schleicher
R2280 T3370 T3362 punct ", ",Schleicher
R2281 T3371 T3372 compound United,States
R2282 T3372 T3362 npadvmod States,Schleicher
R2283 T3373 T3362 punct ),Schleicher
R2284 T3374 T3352 prep in,transferred
R2285 T3375 T3376 nummod 1,buffer
R2286 T3376 T3374 pobj buffer,in
R2287 T3377 T3375 punct ×,1
R2288 T3378 T3376 compound TG,buffer
R2289 T3379 T3380 punct (,Amresco
R2290 T3380 T3376 parataxis Amresco,buffer
R2291 T3381 T3380 punct ),Amresco
R2292 T3382 T3352 punct .,transferred
R2293 T3384 T3385 nsubjpass Blots,blocked
R2294 T3386 T3385 auxpass were,blocked
R2295 T3387 T3385 prep in,blocked
R2296 T3388 T3387 pobj PBS,in
R2297 T3389 T3388 acl containing,PBS
R2298 T3390 T3391 nummod 5,%
R2299 T3391 T3392 nmod %,powder
R2300 T3392 T3389 dobj powder,containing
R2301 T3393 T3394 amod nonfat,milk
R2302 T3394 T3392 compound milk,powder
R2303 T3395 T3394 amod dry,milk
R2304 T3396 T3385 punct ", ",blocked
R2305 T3397 T3385 cc and,blocked
R2306 T3398 T3385 conj incubated,blocked
R2307 T3399 T3398 prep for,incubated
R2308 T3400 T3401 nummod 3,h
R2309 T3401 T3399 pobj h,for
R2310 T3402 T3398 prep at,incubated
R2311 T3403 T3404 compound room,temperature
R2312 T3404 T3402 pobj temperature,at
R2313 T3405 T3398 prep in,incubated
R2314 T3406 T3407 compound blocking,solution
R2315 T3407 T3405 pobj solution,in
R2316 T3408 T3407 prep with,solution
R2317 T3409 T3408 pobj one,with
R2318 T3410 T3409 prep of,one
R2319 T3411 T3412 det the,antibodies
R2320 T3412 T3410 pobj antibodies,of
R2321 T3413 T3412 amod following,antibodies
R2322 T3414 T3412 punct : ,antibodies
R2323 T3415 T3416 nmod mouse,22C11
R2324 T3416 T3412 appos 22C11,antibodies
R2325 T3417 T3416 amod monoclonal,22C11
R2326 T3418 T3419 punct (,17
R2327 T3419 T3416 parataxis 17,22C11
R2328 T3420 T3421 amod kind,gift
R2329 T3421 T3419 dep gift,17
R2330 T3422 T3421 prep of,gift
R2331 T3423 T3424 compound Konrad,Beyreuther
R2332 T3424 T3422 pobj Beyreuther,of
R2333 T3425 T3424 cc and,Beyreuther
R2334 T3426 T3427 compound Andreas,Weidemann
R2335 T3427 T3424 conj Weidemann,Beyreuther
R2336 T3428 T3419 punct ;,17
R2337 T3429 T3419 punct [,17
R2338 T3430 T3419 punct ],17
R2339 T3431 T3419 punct ),17
R2340 T3432 T3416 acl diluted,22C11
R2341 T3433 T3432 npadvmod 1,diluted
R2342 T3434 T3435 punct :,"1,000"
R2343 T3435 T3433 prep "1,000",1
R2344 T3436 T3416 punct ", ",22C11
R2345 T3437 T3438 nmod mouse,6E10
R2346 T3438 T3416 conj 6E10,22C11
R2347 T3439 T3438 amod monoclonal,6E10
R2348 T3440 T3441 punct (,Laboratories
R2349 T3441 T3438 parataxis Laboratories,6E10
R2350 T3442 T3441 compound Signet,Laboratories
R2351 T3443 T3441 punct ", ",Laboratories
R2352 T3444 T3441 npadvmod Dedham,Laboratories
R2353 T3445 T3441 punct ", ",Laboratories
R2354 T3446 T3441 npadvmod Massachusetts,Laboratories
R2355 T3447 T3441 punct ", ",Laboratories
R2356 T3448 T3449 compound United,States
R2357 T3449 T3441 npadvmod States,Laboratories
R2358 T3450 T3441 punct ),Laboratories
R2359 T3451 T3438 acl diluted,6E10
R2360 T3452 T3451 npadvmod 1,diluted
R2361 T3453 T3454 punct :,"2,500"
R2362 T3454 T3452 prep "2,500",1
R2363 T3455 T3438 punct ", ",6E10
R2364 T3456 T3457 nmod rabbit,hSOD1
R2365 T3457 T3438 conj hSOD1,6E10
R2366 T3458 T3457 amod polyclonal,hSOD1
R2367 T3459 T3457 amod anti-superoxide,hSOD1
R2368 T3460 T3457 nmod dismutase,hSOD1
R2369 T3461 T3457 nummod 1,hSOD1
R2370 T3462 T3457 punct (,hSOD1
R2371 T3463 T3457 compound m,hSOD1
R2372 T3464 T3457 punct /,hSOD1
R2373 T3465 T3457 punct ),hSOD1
R2374 T3466 T3467 punct [,18
R2375 T3467 T3457 parataxis 18,hSOD1
R2376 T3468 T3467 punct ],18
R2377 T3469 T3457 acl diluted,hSOD1
R2378 T3470 T3469 npadvmod 1,diluted
R2379 T3471 T3472 punct :,"2,500"
R2380 T3472 T3470 prep "2,500",1
R2381 T3473 T3470 prep to,1
R2382 T3474 T3473 pobj 1,to
R2383 T3475 T3476 punct :,"4,000"
R2384 T3476 T3474 prep "4,000",1
R2385 T3477 T3457 punct ", ",hSOD1
R2386 T3478 T3457 cc or,hSOD1
R2387 T3479 T3480 nmod rabbit,CT15
R2388 T3480 T3457 conj CT15,hSOD1
R2389 T3481 T3480 amod polyclonal,CT15
R2390 T3482 T3483 punct (,gift
R2391 T3483 T3480 parataxis gift,CT15
R2392 T3484 T3483 amod kind,gift
R2393 T3485 T3483 prep of,gift
R2394 T3486 T3487 compound Ed,Koo
R2395 T3487 T3485 pobj Koo,of
R2396 T3488 T3483 punct ;,gift
R2397 T3489 T3490 punct [,19
R2398 T3490 T3483 parataxis 19,gift
R2399 T3491 T3490 punct ],19
R2400 T3492 T3483 punct ),gift
R2401 T3493 T3480 acl diluted,CT15
R2402 T3494 T3493 npadvmod 1,diluted
R2403 T3495 T3496 punct :,"1,000"
R2404 T3496 T3494 prep "1,000",1
R2405 T3497 T3385 punct .,blocked
R2406 T3499 T3500 advmod Subsequently,washed
R2407 T3501 T3500 punct ", ",washed
R2408 T3502 T3503 det the,blots
R2409 T3503 T3500 nsubjpass blots,washed
R2410 T3504 T3500 auxpass were,washed
R2411 T3505 T3500 prep with,washed
R2412 T3506 T3505 pobj PBS,with
R2413 T3507 T3506 acl containing,PBS
R2414 T3508 T3509 nummod 0.1,%
R2415 T3509 T3510 compound %,Tween
R2416 T3510 T3507 dobj Tween,containing
R2417 T3511 T3510 punct -,Tween
R2418 T3512 T3510 nummod 20,Tween
R2419 T3513 T3500 punct ", ",washed
R2420 T3514 T3500 cc and,washed
R2421 T3515 T3516 advmod then,incubated
R2422 T3516 T3500 conj incubated,washed
R2423 T3517 T3516 prep with,incubated
R2424 T3518 T3519 preconj either,goat
R2425 T3519 T3520 nmod goat,antibody
R2426 T3520 T3517 pobj antibody,with
R2427 T3521 T3519 amod anti-mouse,goat
R2428 T3522 T3519 punct –,goat
R2429 T3523 T3519 cc or,goat
R2430 T3524 T3519 conj goat,goat
R2431 T3525 T3524 amod anti-rabbit,goat
R2432 T3526 T3520 punct –,antibody
R2433 T3527 T3528 npadvmod HRP,conjugated
R2434 T3528 T3520 amod conjugated,antibody
R2435 T3529 T3520 amod secondary,antibody
R2436 T3530 T3520 acl diluted,antibody
R2437 T3531 T3530 npadvmod 1,diluted
R2438 T3532 T3533 punct :,"1,000"
R2439 T3533 T3531 prep "1,000",1
R2440 T3534 T3530 prep in,diluted
R2441 T3535 T3536 compound blocking,solution
R2442 T3536 T3534 pobj solution,in
R2443 T3537 T3500 punct .,washed
R2444 T3539 T3540 prep After,developed
R2445 T3541 T3542 amod several,rinses
R2446 T3542 T3539 pobj rinses,After
R2447 T3543 T3542 amod additional,rinses
R2448 T3544 T3542 prep in,rinses
R2449 T3545 T3544 pobj PBS,in
R2450 T3546 T3542 prep with,rinses
R2451 T3547 T3548 nummod 0.1,Tween
R2452 T3548 T3546 pobj Tween,with
R2453 T3549 T3547 quantmod %,0.1
R2454 T3550 T3548 punct -,Tween
R2455 T3551 T3548 nummod 20,Tween
R2456 T3552 T3540 punct ", ",developed
R2457 T3553 T3540 nsubjpass blots,developed
R2458 T3554 T3540 auxpass were,developed
R2459 T3555 T3540 prep with,developed
R2460 T3556 T3557 amod enhanced,reagent
R2461 T3557 T3555 pobj reagent,with
R2462 T3558 T3557 compound chemiluminescence,reagent
R2463 T3559 T3540 cc and,developed
R2464 T3560 T3540 conj imaged,developed
R2465 T3561 T3560 prep with,imaged
R2466 T3562 T3563 det the,system
R2467 T3563 T3561 pobj system,with
R2468 T3564 T3565 compound Bio,Rad
R2469 T3565 T3567 compound Rad,FX
R2470 T3566 T3565 punct -,Rad
R2471 T3567 T3563 compound FX,system
R2472 T3568 T3567 compound Molecular,FX
R2473 T3569 T3567 compound Imager,FX
R2474 T3570 T3540 punct .,developed
R2475 T3572 T3573 compound Staining,intensity
R2476 T3573 T3574 nsubjpass intensity,quantified
R2477 T3575 T3573 prep within,intensity
R2478 T3576 T3577 det each,lane
R2479 T3577 T3575 pobj lane,within
R2480 T3578 T3574 auxpass was,quantified
R2481 T3579 T3574 advcl using,quantified
R2482 T3580 T3581 det the,software
R2483 T3581 T3579 dobj software,using
R2484 T3582 T3581 nmod Quantity,software
R2485 T3583 T3582 nummod One,Quantity
R2486 T3584 T3585 compound image,analysis
R2487 T3585 T3581 compound analysis,software
R2488 T3586 T3587 punct (,FX
R2489 T3587 T3581 parataxis FX,software
R2490 T3588 T3589 compound Molecular,Imager
R2491 T3589 T3587 compound Imager,FX
R2492 T3590 T3587 punct ", ",FX
R2493 T3591 T3592 compound Bio,Rad
R2494 T3592 T3594 compound Rad,Laboratories
R2495 T3593 T3592 punct -,Rad
R2496 T3594 T3587 npadvmod Laboratories,FX
R2497 T3595 T3587 punct ),FX
R2498 T3596 T3574 punct .,quantified
R2499 T3598 T3599 nsubjpass Background,calculated
R2500 T3600 T3599 auxpass was,calculated
R2501 T3601 T3599 prep from,calculated
R2502 T3602 T3601 prep across,from
R2503 T3603 T3604 det the,image
R2504 T3604 T3602 pobj image,across
R2505 T3605 T3599 cc and,calculated
R2506 T3606 T3599 conj subtracted,calculated
R2507 T3607 T3606 prep from,subtracted
R2508 T3608 T3609 det the,file
R2509 T3609 T3607 pobj file,from
R2510 T3610 T3609 amod entire,file
R2511 T3611 T3599 punct .,calculated
R2512 T3613 T3614 det The,intensity
R2513 T3614 T3616 nsubjpass intensity,calculated
R2514 T3615 T3614 compound signal,intensity
R2515 T3617 T3614 prep for,intensity
R2516 T3618 T3619 det each,band
R2517 T3619 T3617 pobj band,for
R2518 T3620 T3621 punct (,intensity
R2519 T3621 T3614 parataxis intensity,intensity
R2520 T3622 T3621 amod corrected,intensity
R2521 T3623 T3621 compound signal,intensity
R2522 T3624 T3621 punct ×,intensity
R2523 T3625 T3626 compound pixel,number
R2524 T3626 T3621 appos number,intensity
R2525 T3627 T3621 punct ),intensity
R2526 T3628 T3616 auxpass was,calculated
R2527 T3629 T3616 advmod then,calculated
R2528 T3630 T3616 advcl using,calculated
R2529 T3631 T3632 det the,tool
R2530 T3632 T3630 dobj tool,using
R2531 T3633 T3634 compound Volume,report
R2532 T3634 T3632 compound report,tool
R2533 T3635 T3616 punct .,calculated
R2534 T3710 T3711 compound Slot,Blot
R2535 T3711 T3712 compound Blot,Analysis
R2536 T3713 T3712 compound mRNA,Analysis
R2537 T3715 T3716 nummod Five,micrograms
R2538 T3716 T3717 nsubjpass micrograms,filtered
R2539 T3718 T3716 prep per,micrograms
R2540 T3719 T3718 pobj sample,per
R2541 T3720 T3719 prep of,sample
R2542 T3721 T3722 amod total,RNA
R2543 T3722 T3720 pobj RNA,of
R2544 T3723 T3722 acl extracted,RNA
R2545 T3724 T3723 prep from,extracted
R2546 T3725 T3726 amod fresh,frozen
R2547 T3726 T3728 amod frozen,brain
R2548 T3727 T3726 punct -,frozen
R2549 T3728 T3724 pobj brain,from
R2550 T3729 T3728 punct ", ",brain
R2551 T3730 T3728 conj liver,brain
R2552 T3731 T3730 punct ", ",liver
R2553 T3732 T3730 conj kidney,liver
R2554 T3733 T3732 punct ", ",kidney
R2555 T3734 T3732 conj heart,kidney
R2556 T3735 T3734 punct ", ",heart
R2557 T3736 T3734 conj lung,heart
R2558 T3737 T3736 punct ", ",lung
R2559 T3738 T3736 conj spleen,lung
R2560 T3739 T3738 punct ", ",spleen
R2561 T3740 T3738 cc and,spleen
R2562 T3741 T3742 amod skeletal,muscle
R2563 T3742 T3738 conj muscle,spleen
R2564 T3743 T3717 auxpass was,filtered
R2565 T3744 T3717 dep vacuum,filtered
R2566 T3745 T3717 punct -,filtered
R2567 T3746 T3717 prep through,filtered
R2568 T3747 T3748 nummod 0.45,μm
R2569 T3748 T3750 compound μm,nitrocellulose
R2570 T3749 T3748 punct -,μm
R2571 T3750 T3746 pobj nitrocellulose,through
R2572 T3751 T3750 compound Optitran,nitrocellulose
R2573 T3752 T3717 punct .,filtered
R2574 T3754 T3755 prep After,cross-linked
R2575 T3756 T3757 amod several,washes
R2576 T3757 T3754 pobj washes,After
R2577 T3758 T3757 prep through,washes
R2578 T3759 T3760 det the,manifold
R2579 T3760 T3758 pobj manifold,through
R2580 T3761 T3757 prep with,washes
R2581 T3762 T3763 nummod 10,SSC
R2582 T3763 T3761 pobj SSC,with
R2583 T3764 T3762 punct ×,10
R2584 T3765 T3755 punct ", ",cross-linked
R2585 T3766 T3755 nsubjpass blots,cross-linked
R2586 T3767 T3755 auxpass were,cross-linked
R2587 T3768 T3755 dep UV,cross-linked
R2588 T3769 T3755 punct -,cross-linked
R2589 T3770 T3755 cc and,cross-linked
R2590 T3771 T3755 conj probed,cross-linked
R2591 T3772 T3771 prep with,probed
R2592 T3773 T3774 det a,fragment
R2593 T3774 T3772 pobj fragment,with
R2594 T3775 T3774 amod radiolabeled,fragment
R2595 T3776 T3777 punct ∼,350
R2596 T3777 T3778 nummod 350,bp
R2597 T3778 T3774 compound bp,fragment
R2598 T3779 T3778 punct -,bp
R2599 T3780 T3781 compound BglII,XhoI
R2600 T3781 T3774 compound XhoI,fragment
R2601 T3782 T3781 punct –,XhoI
R2602 T3783 T3774 compound cDNA,fragment
R2603 T3784 T3774 prep of,fragment
R2604 T3785 T3786 compound mo,huAPP695
R2605 T3786 T3788 compound huAPP695,cDNA
R2606 T3787 T3786 punct /,huAPP695
R2607 T3788 T3784 pobj cDNA,of
R2608 T3789 T3755 punct .,cross-linked
R2609 T3791 T3792 prep After,washed
R2610 T3793 T3791 pcomp hybridizing,After
R2611 T3794 T3793 advmod overnight,hybridizing
R2612 T3795 T3793 prep at,hybridizing
R2613 T3796 T3797 nummod 65,°C
R2614 T3797 T3795 pobj °C,at
R2615 T3798 T3793 prep in,hybridizing
R2616 T3799 T3800 nummod 1,%
R2617 T3800 T3801 compound %,BSA
R2618 T3801 T3798 pobj BSA,in
R2619 T3802 T3801 punct /,BSA
R2620 T3803 T3804 nummod 1,mM
R2621 T3804 T3805 compound mM,EDTA
R2622 T3805 T3801 appos EDTA,BSA
R2623 T3806 T3801 punct /,BSA
R2624 T3807 T3808 nummod 0.5,M
R2625 T3808 T3809 compound M,buffer
R2626 T3809 T3801 appos buffer,BSA
R2627 T3810 T3809 compound sodium,buffer
R2628 T3811 T3809 compound phosphate,buffer
R2629 T3812 T3813 punct (,pH
R2630 T3813 T3809 parataxis pH,buffer
R2631 T3814 T3813 nummod 7.2,pH
R2632 T3815 T3813 punct ),pH
R2633 T3816 T3801 punct /,BSA
R2634 T3817 T3818 nummod 7,%
R2635 T3818 T3819 compound %,SDS
R2636 T3819 T3801 appos SDS,BSA
R2637 T3820 T3821 punct [,20
R2638 T3821 T3819 parataxis 20,SDS
R2639 T3822 T3821 punct ],20
R2640 T3823 T3792 punct ", ",washed
R2641 T3824 T3825 det the,blots
R2642 T3825 T3792 nsubjpass blots,washed
R2643 T3826 T3792 auxpass were,washed
R2644 T3827 T3792 advmod twice,washed
R2645 T3828 T3792 prep at,washed
R2646 T3829 T3830 nummod 65,°C
R2647 T3830 T3828 pobj °C,at
R2648 T3831 T3792 prep for,washed
R2649 T3832 T3833 nummod 30,min
R2650 T3833 T3831 pobj min,for
R2651 T3834 T3833 appos each,min
R2652 T3835 T3792 prep in,washed
R2653 T3836 T3837 nummod 0.1,%
R2654 T3837 T3838 compound %,BSA
R2655 T3838 T3835 pobj BSA,in
R2656 T3839 T3838 punct /,BSA
R2657 T3840 T3841 nummod 1,mM
R2658 T3841 T3842 compound mM,EDTA
R2659 T3842 T3838 appos EDTA,BSA
R2660 T3843 T3838 punct /,BSA
R2661 T3844 T3845 nummod 40,mM
R2662 T3845 T3846 compound mM,buffer
R2663 T3846 T3838 appos buffer,BSA
R2664 T3847 T3846 compound sodium,buffer
R2665 T3848 T3846 compound phosphate,buffer
R2666 T3849 T3850 punct (,pH
R2667 T3850 T3846 parataxis pH,buffer
R2668 T3851 T3850 nummod 7.2,pH
R2669 T3852 T3850 punct ),pH
R2670 T3853 T3838 punct /,BSA
R2671 T3854 T3855 nummod 5,%
R2672 T3855 T3856 compound %,SDS
R2673 T3856 T3838 appos SDS,BSA
R2674 T3857 T3792 prep before,washed
R2675 T3858 T3859 nummod two,washes
R2676 T3859 T3857 pobj washes,before
R2677 T3860 T3859 amod final,washes
R2678 T3861 T3862 nummod 30,min
R2679 T3862 T3859 compound min,washes
R2680 T3863 T3862 punct -,min
R2681 T3864 T3859 prep at,washes
R2682 T3865 T3866 nummod 65,°C
R2683 T3866 T3864 pobj °C,at
R2684 T3867 T3859 prep with,washes
R2685 T3868 T3869 nummod 1,mM
R2686 T3869 T3870 compound mM,EDTA
R2687 T3870 T3867 pobj EDTA,with
R2688 T3871 T3870 punct /,EDTA
R2689 T3872 T3873 nummod 40,mM
R2690 T3873 T3874 compound mM,buffer
R2691 T3874 T3870 appos buffer,EDTA
R2692 T3875 T3874 compound sodium,buffer
R2693 T3876 T3874 compound phosphate,buffer
R2694 T3877 T3878 punct (,pH
R2695 T3878 T3874 parataxis pH,buffer
R2696 T3879 T3878 nummod 7.2,pH
R2697 T3880 T3878 punct ),pH
R2698 T3881 T3870 punct /,EDTA
R2699 T3882 T3883 nummod 1,%
R2700 T3883 T3884 compound %,SDS
R2701 T3884 T3870 appos SDS,EDTA
R2702 T3885 T3792 punct .,washed
R2703 T3887 T3888 nsubjpass Blots,wrapped
R2704 T3889 T3888 auxpass were,wrapped
R2705 T3890 T3888 advcl wet,wrapped
R2706 T3891 T3888 cc and,wrapped
R2707 T3892 T3888 conj exposed,wrapped
R2708 T3893 T3892 prep to,exposed
R2709 T3894 T3893 pobj phosphorscreens,to
R2710 T3895 T3892 advmod overnight,exposed
R2711 T3896 T3892 prep at,exposed
R2712 T3897 T3898 compound room,temperature
R2713 T3898 T3896 pobj temperature,at
R2714 T3899 T3888 punct .,wrapped
R2715 T4137 T4138 compound Amyloid,Histology
R2716 T4140 T4141 nsubjpass Mice,euthanized
R2717 T4142 T4141 auxpass were,euthanized
R2718 T4143 T4141 prep by,euthanized
R2719 T4144 T4145 compound ether,inhalation
R2720 T4145 T4143 pobj inhalation,by
R2721 T4146 T4141 cc and,euthanized
R2722 T4147 T4148 nsubj brains,removed
R2723 T4148 T4141 conj removed,euthanized
R2724 T4149 T4148 prep for,removed
R2725 T4150 T4151 compound immersion,fixation
R2726 T4151 T4149 pobj fixation,for
R2727 T4152 T4151 prep in,fixation
R2728 T4153 T4154 nummod 4,%
R2729 T4154 T4155 compound %,paraformaldehyde
R2730 T4155 T4152 pobj paraformaldehyde,in
R2731 T4156 T4155 punct /,paraformaldehyde
R2732 T4157 T4158 nummod 1,PBS
R2733 T4158 T4155 appos PBS,paraformaldehyde
R2734 T4159 T4157 punct ×,1
R2735 T4160 T4148 punct .,removed
R2736 T4162 T4163 prep After,transferred
R2737 T4164 T4165 nummod 48,h
R2738 T4165 T4162 pobj h,After
R2739 T4166 T4165 prep in,h
R2740 T4167 T4166 pobj fixative,in
R2741 T4168 T4165 prep at,h
R2742 T4169 T4170 nummod 4,°C
R2743 T4170 T4168 pobj °C,at
R2744 T4171 T4163 punct ", ",transferred
R2745 T4172 T4163 nsubjpass brains,transferred
R2746 T4173 T4163 auxpass were,transferred
R2747 T4174 T4163 prep to,transferred
R2748 T4175 T4174 pobj PBS,to
R2749 T4176 T4163 punct ", ",transferred
R2750 T4177 T4163 conj dehydrated,transferred
R2751 T4178 T4177 prep in,dehydrated
R2752 T4179 T4178 pobj alcohols,in
R2753 T4180 T4177 punct ", ",dehydrated
R2754 T4181 T4177 conj treated,dehydrated
R2755 T4182 T4181 prep with,treated
R2756 T4183 T4184 compound cedarwood,oil
R2757 T4184 T4182 pobj oil,with
R2758 T4185 T4184 cc and,oil
R2759 T4186 T4184 conj methylsalicylate,oil
R2760 T4187 T4181 punct ", ",treated
R2761 T4188 T4181 cc and,treated
R2762 T4189 T4181 conj embedded,treated
R2763 T4190 T4189 prep in,embedded
R2764 T4191 T4190 pobj paraffin,in
R2765 T4192 T4189 prep for,embedded
R2766 T4193 T4192 pobj sectioning,for
R2767 T4194 T4163 punct .,transferred
R2768 T4196 T4197 compound Hirano,stain
R2769 T4198 T4197 compound silver,stain
R2770 T4200 T4201 compound Silver,histology
R2771 T4201 T4203 nsubjpass histology,performed
R2772 T4202 T4201 compound impregnation,histology
R2773 T4204 T4203 auxpass was,performed
R2774 T4205 T4203 prep on,performed
R2775 T4206 T4207 nummod 10,μm
R2776 T4207 T4209 nmod μm,sections
R2777 T4208 T4207 punct -,μm
R2778 T4209 T4205 pobj sections,on
R2779 T4210 T4211 npadvmod paraffin,embedded
R2780 T4211 T4209 amod embedded,sections
R2781 T4212 T4211 punct -,embedded
R2782 T4213 T4203 prep by,performed
R2783 T4214 T4215 poss Hirano,modification
R2784 T4215 T4213 pobj modification,by
R2785 T4216 T4214 case 's,Hirano
R2786 T4217 T4215 prep of,modification
R2787 T4218 T4219 det the,method
R2788 T4219 T4217 pobj method,of
R2789 T4220 T4219 compound Bielschowsky,method
R2790 T4221 T4222 punct [,21
R2791 T4222 T4203 parataxis 21,performed
R2792 T4223 T4222 punct ],21
R2793 T4224 T4203 punct .,performed
R2794 T4226 T4227 advmod Briefly,deparaffinized
R2795 T4228 T4227 punct ", ",deparaffinized
R2796 T4229 T4227 nsubjpass sections,deparaffinized
R2797 T4230 T4227 auxpass were,deparaffinized
R2798 T4231 T4227 prep through,deparaffinized
R2799 T4232 T4231 pobj xylene,through
R2800 T4233 T4232 cc and,xylene
R2801 T4234 T4232 conj alcohols,xylene
R2802 T4235 T4227 prep into,deparaffinized
R2803 T4236 T4237 compound tap,water
R2804 T4237 T4235 pobj water,into
R2805 T4238 T4227 prep before,deparaffinized
R2806 T4239 T4240 auxpass being,placed
R2807 T4240 T4238 pcomp placed,before
R2808 T4241 T4240 prep into,placed
R2809 T4242 T4243 amod fresh,solution
R2810 T4243 T4241 pobj solution,into
R2811 T4244 T4245 nummod 20,%
R2812 T4245 T4243 compound %,solution
R2813 T4246 T4243 compound silver,solution
R2814 T4247 T4243 compound nitrate,solution
R2815 T4248 T4240 prep for,placed
R2816 T4249 T4250 nummod 20,min
R2817 T4250 T4248 pobj min,for
R2818 T4251 T4227 punct .,deparaffinized
R2819 T4253 T4254 prep After,immersed
R2820 T4255 T4256 auxpass being,washed
R2821 T4256 T4253 pcomp washed,After
R2822 T4257 T4256 advmod thoroughly,washed
R2823 T4258 T4256 prep with,washed
R2824 T4259 T4260 amod distilled,water
R2825 T4260 T4258 pobj water,with
R2826 T4261 T4254 punct ", ",immersed
R2827 T4262 T4254 nsubjpass slides,immersed
R2828 T4263 T4254 auxpass were,immersed
R2829 T4264 T4254 prep in,immersed
R2830 T4265 T4266 nummod 20,%
R2831 T4266 T4267 compound %,solution
R2832 T4267 T4264 pobj solution,in
R2833 T4268 T4269 compound silver,nitrate
R2834 T4269 T4267 compound nitrate,solution
R2835 T4270 T4267 acl titrated,solution
R2836 T4271 T4270 prep with,titrated
R2837 T4272 T4273 amod fresh,hydroxide
R2838 T4273 T4271 pobj hydroxide,with
R2839 T4274 T4273 compound ammonium,hydroxide
R2840 T4275 T4254 punct .,immersed
R2841 T4277 T4278 prep After,washed
R2842 T4279 T4280 nummod 20,min
R2843 T4280 T4277 pobj min,After
R2844 T4281 T4278 punct ", ",washed
R2845 T4282 T4278 nsubjpass slides,washed
R2846 T4283 T4278 auxpass were,washed
R2847 T4284 T4278 prep with,washed
R2848 T4285 T4286 compound ammonia,water
R2849 T4286 T4284 pobj water,with
R2850 T4287 T4278 prep before,washed
R2851 T4288 T4289 auxpass being,developed
R2852 T4289 T4287 pcomp developed,before
R2853 T4290 T4289 advmod individually,developed
R2854 T4291 T4289 prep with,developed
R2855 T4292 T4293 nummod 100,μl
R2856 T4293 T4291 pobj μl,with
R2857 T4294 T4293 prep of,μl
R2858 T4295 T4294 pobj developer,of
R2859 T4296 T4297 punct (,ml
R2860 T4297 T4295 parataxis ml,developer
R2861 T4298 T4297 nummod 20,ml
R2862 T4299 T4297 prep of,ml
R2863 T4300 T4301 nummod 37,%
R2864 T4301 T4302 compound %,formaldehyde
R2865 T4302 T4299 pobj formaldehyde,of
R2866 T4303 T4297 punct ", ",ml
R2867 T4304 T4305 nummod 100,ml
R2868 T4305 T4297 conj ml,ml
R2869 T4306 T4305 prep of,ml
R2870 T4307 T4308 amod distilled,water
R2871 T4308 T4306 pobj water,of
R2872 T4309 T4305 punct ", ",ml
R2873 T4310 T4311 nummod 50,μl
R2874 T4311 T4305 conj μl,ml
R2875 T4312 T4311 prep of,μl
R2876 T4313 T4314 amod concentrated,acid
R2877 T4314 T4312 pobj acid,of
R2878 T4315 T4314 amod nitric,acid
R2879 T4316 T4311 punct ", ",μl
R2880 T4317 T4311 cc and,μl
R2881 T4318 T4319 nummod 0.5,g
R2882 T4319 T4311 conj g,μl
R2883 T4320 T4319 prep of,g
R2884 T4321 T4322 amod citric,acid
R2885 T4322 T4320 pobj acid,of
R2886 T4323 T4297 punct ),ml
R2887 T4324 T4293 acl added,μl
R2888 T4325 T4324 prep to,added
R2889 T4326 T4327 nummod 50,ml
R2890 T4327 T4325 pobj ml,to
R2891 T4328 T4327 prep of,ml
R2892 T4329 T4330 amod titrated,solution
R2893 T4330 T4328 pobj solution,of
R2894 T4331 T4332 compound silver,nitrate
R2895 T4332 T4330 compound nitrate,solution
R2896 T4333 T4278 punct .,washed
R2897 T4335 T4336 nsubjpass Slides,rinsed
R2898 T4337 T4336 auxpass were,rinsed
R2899 T4338 T4336 advmod then,rinsed
R2900 T4339 T4336 prep in,rinsed
R2901 T4340 T4341 compound tap,water
R2902 T4341 T4339 pobj water,in
R2903 T4342 T4336 punct ", ",rinsed
R2904 T4343 T4336 conj fixed,rinsed
R2905 T4344 T4343 prep in,fixed
R2906 T4345 T4346 nummod 5,%
R2907 T4346 T4347 compound %,thiosulfate
R2908 T4347 T4344 pobj thiosulfate,in
R2909 T4348 T4347 compound sodium,thiosulfate
R2910 T4349 T4343 punct ", ",fixed
R2911 T4350 T4343 cc and,fixed
R2912 T4351 T4343 conj dehydrated,fixed
R2913 T4352 T4351 prep through,dehydrated
R2914 T4353 T4352 pobj alcohols,through
R2915 T4354 T4353 cc and,alcohols
R2916 T4355 T4353 conj xylene,alcohols
R2917 T4356 T4336 punct .,rinsed
R2918 T4358 T4359 compound Thioflavin,S
R2919 T4359 T4361 compound S,staining
R2920 T4360 T4359 punct -,S
R2921 T4363 T4364 prep Following,performed
R2922 T4365 T4363 pobj deparaffinization,Following
R2923 T4366 T4365 prep of,deparaffinization
R2924 T4367 T4366 pobj sections,of
R2925 T4368 T4365 prep through,deparaffinization
R2926 T4369 T4368 pobj xylene,through
R2927 T4370 T4369 cc and,xylene
R2928 T4371 T4369 conj alcohols,xylene
R2929 T4372 T4364 punct ", ",performed
R2930 T4373 T4374 compound amyloid,impregnation
R2931 T4374 T4364 nsubjpass impregnation,performed
R2932 T4375 T4374 prep with,impregnation
R2933 T4376 T4377 compound thioflavin,S
R2934 T4377 T4375 pobj S,with
R2935 T4378 T4377 punct -,S
R2936 T4379 T4364 auxpass was,performed
R2937 T4380 T4364 prep according,performed
R2938 T4381 T4380 prep to,according
R2939 T4382 T4383 det the,modification
R2940 T4383 T4381 pobj modification,to
R2941 T4384 T4383 compound Guntern,modification
R2942 T4385 T4383 prep of,modification
R2943 T4386 T4387 det the,protocol
R2944 T4387 T4385 pobj protocol,of
R2945 T4388 T4387 amod standard,protocol
R2946 T4389 T4364 punct .,performed
R2947 T4391 T4392 nsubjpass Slides,washed
R2948 T4393 T4391 acl holding,Slides
R2949 T4394 T4395 nummod 10,μm
R2950 T4395 T4397 compound μm,sections
R2951 T4396 T4395 punct -,μm
R2952 T4397 T4393 dobj sections,holding
R2953 T4398 T4397 compound paraffin,sections
R2954 T4399 T4392 auxpass were,washed
R2955 T4400 T4392 advmod twice,washed
R2956 T4401 T4392 prep in,washed
R2957 T4402 T4403 amod distilled,water
R2958 T4403 T4401 pobj water,in
R2959 T4404 T4392 punct ", ",washed
R2960 T4405 T4406 advmod then,immersed
R2961 T4406 T4392 dep immersed,washed
R2962 T4407 T4406 prep for,immersed
R2963 T4408 T4409 nummod 5,min
R2964 T4409 T4407 pobj min,for
R2965 T4410 T4406 prep in,immersed
R2966 T4411 T4412 det a,solution
R2967 T4412 T4410 pobj solution,in
R2968 T4413 T4414 nummod 0.25,%
R2969 T4414 T4412 compound %,solution
R2970 T4415 T4412 compound potassium,solution
R2971 T4416 T4412 compound permanganate,solution
R2972 T4417 T4406 punct ", ",immersed
R2973 T4418 T4406 advcl followed,immersed
R2974 T4419 T4418 agent by,followed
R2975 T4420 T4421 nummod 5,min
R2976 T4421 T4419 pobj min,by
R2977 T4422 T4421 prep in,min
R2978 T4423 T4424 det a,solution
R2979 T4424 T4422 pobj solution,in
R2980 T4425 T4426 nummod 1,%
R2981 T4426 T4427 nmod %,metabisulfate
R2982 T4427 T4424 nmod metabisulfate,solution
R2983 T4428 T4427 nmod potassium,metabisulfate
R2984 T4429 T4427 punct /,metabisulfate
R2985 T4430 T4431 nummod 1,%
R2986 T4431 T4432 nmod %,acid
R2987 T4432 T4427 appos acid,metabisulfate
R2988 T4433 T4432 amod oxalic,acid
R2989 T4434 T4392 punct .,washed
R2990 T4436 T4437 prep After,placed
R2991 T4438 T4439 det this,preparation
R2992 T4439 T4436 pobj preparation,After
R2993 T4440 T4437 punct ", ",placed
R2994 T4441 T4437 nsubjpass slides,placed
R2995 T4442 T4437 auxpass were,placed
R2996 T4443 T4437 prep into,placed
R2997 T4444 T4445 det a,solution
R2998 T4445 T4443 pobj solution,into
R2999 T4446 T4445 amod filtered,solution
R3000 T4447 T4445 amod aqueous,solution
R3001 T4448 T4449 nummod 0.02,%
R3002 T4449 T4445 compound %,solution
R3003 T4450 T4451 compound thioflavin,S
R3004 T4451 T4445 compound S,solution
R3005 T4452 T4451 punct -,S
R3006 T4453 T4454 punct (,Schmid
R3007 T4454 T4445 parataxis Schmid,solution
R3008 T4455 T4456 compound Chroma,Gesellschaft
R3009 T4456 T4454 compound Gesellschaft,Schmid
R3010 T4457 T4456 punct -,Gesellschaft
R3011 T4458 T4454 punct ", ",Schmid
R3012 T4459 T4454 npadvmod Kongen,Schmid
R3013 T4460 T4454 punct ", ",Schmid
R3014 T4461 T4454 npadvmod Germany,Schmid
R3015 T4462 T4454 punct ),Schmid
R3016 T4463 T4437 prep for,placed
R3017 T4464 T4465 nummod 8,min
R3018 T4465 T4463 pobj min,for
R3019 T4466 T4437 punct .,placed
R3020 T4468 T4469 amod Excess,stain
R3021 T4469 T4470 nsubjpass stain,removed
R3022 T4471 T4470 auxpass was,removed
R3023 T4472 T4470 agent by,removed
R3024 T4473 T4474 nummod two,rinses
R3025 T4474 T4472 pobj rinses,by
R3026 T4475 T4474 amod brief,rinses
R3027 T4476 T4474 prep in,rinses
R3028 T4477 T4478 nummod 80,%
R3029 T4478 T4479 compound %,ethanol
R3030 T4479 T4476 pobj ethanol,in
R3031 T4480 T4474 punct ", ",rinses
R3032 T4481 T4482 advmod then,two
R3033 T4482 T4474 appos two,rinses
R3034 T4483 T4482 prep in,two
R3035 T4484 T4485 amod distilled,water
R3036 T4485 T4483 pobj water,in
R3037 T4486 T4474 punct ", ",rinses
R3038 T4487 T4488 prep after,finished
R3039 T4488 T4474 relcl finished,rinses
R3040 T4489 T4487 pobj which,after
R3041 T4490 T4488 nsubjpass slides,finished
R3042 T4491 T4488 auxpass were,finished
R3043 T4492 T4488 prep in,finished
R3044 T4493 T4494 amod aqueous,medium
R3045 T4494 T4492 pobj medium,in
R3046 T4495 T4494 compound mounting,medium
R3047 T4496 T4488 prep for,finished
R3048 T4497 T4498 compound florescence,photomicrography
R3049 T4498 T4496 pobj photomicrography,for
R3050 T4499 T4470 punct .,removed
R3051 T4502 T4501 punct ", ",Ubiquitin
R3052 T4503 T4504 amod glial,protein
R3053 T4504 T4501 conj protein,Ubiquitin
R3054 T4505 T4504 amod fibrillary,protein
R3055 T4506 T4504 amod acidic,protein
R3056 T4507 T4504 punct ", ",protein
R3057 T4508 T4504 cc and,protein
R3058 T4509 T4510 compound Aβ,immunohistochemistry
R3059 T4510 T4504 conj immunohistochemistry,protein
R3060 T4512 T4513 amod Prior,to
R3061 T4513 T4514 prep to,deparaffinized
R3062 T4515 T4513 pobj immunostaining,to
R3063 T4516 T4514 punct ", ",deparaffinized
R3064 T4517 T4514 nsubjpass slides,deparaffinized
R3065 T4518 T4514 auxpass were,deparaffinized
R3066 T4519 T4514 prep by,deparaffinized
R3067 T4520 T4521 compound oven,heating
R3068 T4521 T4519 pobj heating,by
R3069 T4522 T4514 advcl followed,deparaffinized
R3070 T4523 T4522 agent by,followed
R3071 T4524 T4523 pobj immersion,by
R3072 T4525 T4524 prep in,immersion
R3073 T4526 T4525 pobj xylene,in
R3074 T4527 T4514 punct .,deparaffinized
R3075 T4529 T4530 prep After,quenched
R3076 T4531 T4529 pobj rehydration,After
R3077 T4532 T4531 prep through,rehydration
R3078 T4533 T4534 amod graded,alcohols
R3079 T4534 T4532 pobj alcohols,through
R3080 T4535 T4531 prep into,rehydration
R3081 T4536 T4537 compound tap,water
R3082 T4537 T4535 pobj water,into
R3083 T4538 T4530 punct ", ",quenched
R3084 T4539 T4540 amod endogenous,activity
R3085 T4540 T4530 nsubjpass activity,quenched
R3086 T4541 T4540 compound peroxidase,activity
R3087 T4542 T4530 auxpass was,quenched
R3088 T4543 T4530 agent by,quenched
R3089 T4544 T4543 pobj incubation,by
R3090 T4545 T4544 prep with,incubation
R3091 T4546 T4547 nummod 3,%
R3092 T4547 T4548 compound %,peroxide
R3093 T4548 T4545 pobj peroxide,with
R3094 T4549 T4548 compound hydrogen,peroxide
R3095 T4550 T4544 prep in,incubation
R3096 T4551 T4550 pobj methanol,in
R3097 T4552 T4530 punct .,quenched
R3098 T4554 T4555 nsubjpass Slides,microwaved
R3099 T4556 T4555 auxpass were,microwaved
R3100 T4557 T4555 prep for,microwaved
R3101 T4558 T4559 quantmod 5,7
R3102 T4559 T4561 nummod 7,min
R3103 T4560 T4559 punct –,7
R3104 T4561 T4557 pobj min,for
R3105 T4562 T4555 prep in,microwaved
R3106 T4563 T4562 pobj water,in
R3107 T4564 T4555 punct ", ",microwaved
R3108 T4565 T4555 dep cooled,microwaved
R3109 T4566 T4565 prep for,cooled
R3110 T4567 T4568 nummod 5,min
R3111 T4568 T4566 pobj min,for
R3112 T4569 T4555 punct ", ",microwaved
R3113 T4570 T4571 advmod then,washed
R3114 T4571 T4555 dep washed,microwaved
R3115 T4572 T4571 prep in,washed
R3116 T4573 T4572 pobj TBS,in
R3117 T4574 T4555 punct .,microwaved
R3118 T4576 T4577 amod Nonspecific,staining
R3119 T4577 T4578 nsubjpass staining,blocked
R3120 T4579 T4578 auxpass was,blocked
R3121 T4580 T4578 prep for,blocked
R3122 T4581 T4582 nummod 1,h
R3123 T4582 T4580 pobj h,for
R3124 T4583 T4578 prep with,blocked
R3125 T4584 T4585 nummod 3,%
R3126 T4585 T4586 nmod %,serum
R3127 T4586 T4583 pobj serum,with
R3128 T4587 T4586 amod normal,serum
R3129 T4588 T4586 compound goat,serum
R3130 T4589 T4586 cc and,serum
R3131 T4590 T4591 nummod 0.1,%
R3132 T4591 T4592 compound %,X
R3133 T4592 T4586 conj X,serum
R3134 T4593 T4592 compound Triton,X
R3135 T4594 T4592 punct -,X
R3136 T4595 T4592 nummod 100,X
R3137 T4596 T4586 prep in,serum
R3138 T4597 T4596 pobj TBS,in
R3139 T4598 T4578 punct .,blocked
R3140 T4600 T4601 nsubjpass Slides,placed
R3141 T4602 T4601 auxpass were,placed
R3142 T4603 T4601 advmod then,placed
R3143 T4604 T4601 prep into,placed
R3144 T4605 T4606 amod primary,antibody
R3145 T4606 T4604 pobj antibody,into
R3146 T4607 T4608 punct (,antibodies
R3147 T4608 T4606 parataxis antibodies,antibody
R3148 T4609 T4610 nmod rabbit,antibody
R3149 T4610 T4608 dep antibody,antibodies
R3150 T4611 T4610 amod anti-Aβ,antibody
R3151 T4612 T4610 nmod peptide,antibody
R3152 T4613 T4610 amod polyclonal,antibody
R3153 T4614 T4610 punct ", ",antibody
R3154 T4615 T4616 compound Zymed,Laboratories
R3155 T4616 T4610 npadvmod Laboratories,antibody
R3156 T4617 T4610 punct ", ",antibody
R3157 T4618 T4619 compound South,Francisco
R3158 T4619 T4610 npadvmod Francisco,antibody
R3159 T4620 T4619 compound San,Francisco
R3160 T4621 T4610 punct ", ",antibody
R3161 T4622 T4610 npadvmod California,antibody
R3162 T4623 T4610 punct ", ",antibody
R3163 T4624 T4625 compound United,States
R3164 T4625 T4610 npadvmod States,antibody
R3165 T4626 T4608 punct ;,antibodies
R3166 T4627 T4608 nmod rabbit,antibodies
R3167 T4628 T4627 amod anti-ubiquitin,rabbit
R3168 T4629 T4627 cc and,rabbit
R3169 T4630 T4627 conj rabbit,rabbit
R3170 T4631 T4630 amod anti–glial,rabbit
R3171 T4632 T4633 amod fibrillary,protein
R3172 T4633 T4608 nmod protein,antibodies
R3173 T4634 T4633 amod acidic,protein
R3174 T4635 T4633 punct (,protein
R3175 T4636 T4633 appos GFAP,protein
R3176 T4637 T4608 punct ),antibodies
R3177 T4638 T4608 amod polyclonal,antibodies
R3178 T4639 T4608 punct ", ",antibodies
R3179 T4640 T4608 npadvmod Dako,antibodies
R3180 T4641 T4608 punct ", ",antibodies
R3181 T4642 T4608 npadvmod Carpinteria,antibodies
R3182 T4643 T4608 punct ", ",antibodies
R3183 T4644 T4608 npadvmod California,antibodies
R3184 T4645 T4608 punct ", ",antibodies
R3185 T4646 T4647 compound United,States
R3186 T4647 T4608 npadvmod States,antibodies
R3187 T4648 T4608 punct ),antibodies
R3188 T4649 T4606 acl diluted,antibody
R3189 T4650 T4649 npadvmod 1,diluted
R3190 T4651 T4652 punct :,500
R3191 T4652 T4650 prep 500,1
R3192 T4653 T4649 prep in,diluted
R3193 T4654 T4653 pobj TBS,in
R3194 T4655 T4649 prep with,diluted
R3195 T4656 T4657 nummod 2,%
R3196 T4657 T4658 nmod %,serum
R3197 T4658 T4655 pobj serum,with
R3198 T4659 T4658 amod normal,serum
R3199 T4660 T4658 compound goat,serum
R3200 T4661 T4601 cc and,placed
R3201 T4662 T4601 conj incubated,placed
R3202 T4663 T4662 advmod overnight,incubated
R3203 T4664 T4662 prep at,incubated
R3204 T4665 T4666 compound room,temperature
R3205 T4666 T4664 pobj temperature,at
R3206 T4667 T4601 punct .,placed
R3207 T4669 T4670 prep After,incubated
R3208 T4671 T4672 auxpass being,washed
R3209 T4672 T4669 pcomp washed,After
R3210 T4673 T4672 prep of,washed
R3211 T4674 T4675 amod excess,antibody
R3212 T4675 T4673 pobj antibody,of
R3213 T4676 T4675 amod primary,antibody
R3214 T4677 T4672 prep with,washed
R3215 T4678 T4679 amod several,changes
R3216 T4679 T4677 pobj changes,with
R3217 T4680 T4679 prep of,changes
R3218 T4681 T4680 pobj TBS,of
R3219 T4682 T4670 punct ", ",incubated
R3220 T4683 T4670 nsubjpass slides,incubated
R3221 T4684 T4670 auxpass were,incubated
R3222 T4685 T4670 prep with,incubated
R3223 T4686 T4687 preconj either,system
R3224 T4687 T4685 pobj system,with
R3225 T4688 T4687 det the,system
R3226 T4689 T4690 nmod Vectastain,Elite
R3227 T4690 T4687 nmod Elite,system
R3228 T4691 T4687 amod anti-rabbit,system
R3229 T4692 T4687 amod secondary,system
R3230 T4693 T4694 punct (,Laboratories
R3231 T4694 T4687 parataxis Laboratories,system
R3232 T4695 T4694 amod anti-Aβ,Laboratories
R3233 T4696 T4694 punct ;,Laboratories
R3234 T4697 T4694 compound Vector,Laboratories
R3235 T4698 T4694 punct ", ",Laboratories
R3236 T4699 T4694 npadvmod Burlingame,Laboratories
R3237 T4700 T4694 punct ", ",Laboratories
R3238 T4701 T4694 npadvmod California,Laboratories
R3239 T4702 T4694 punct ", ",Laboratories
R3240 T4703 T4704 compound United,States
R3241 T4704 T4694 npadvmod States,Laboratories
R3242 T4705 T4694 punct ),Laboratories
R3243 T4706 T4687 cc or,system
R3244 T4707 T4708 nmod peroxidase,reagents
R3245 T4708 T4687 conj reagents,system
R3246 T4709 T4707 punct /,peroxidase
R3247 T4710 T4707 amod anti-peroxidase,peroxidase
R3248 T4711 T4712 punct (,Monoclonals
R3249 T4712 T4708 parataxis Monoclonals,reagents
R3250 T4713 T4712 amod anti-ubitquitin,Monoclonals
R3251 T4714 T4713 cc and,anti-ubitquitin
R3252 T4715 T4713 conj anti-GFAP,anti-ubitquitin
R3253 T4716 T4712 punct ;,Monoclonals
R3254 T4717 T4712 compound Sternberger,Monoclonals
R3255 T4718 T4712 punct ", ",Monoclonals
R3256 T4719 T4712 npadvmod Lutherville,Monoclonals
R3257 T4720 T4712 punct ", ",Monoclonals
R3258 T4721 T4712 npadvmod Maryland,Monoclonals
R3259 T4722 T4712 punct ", ",Monoclonals
R3260 T4723 T4724 compound United,States
R3261 T4724 T4712 npadvmod States,Monoclonals
R3262 T4725 T4712 punct ),Monoclonals
R3263 T4726 T4670 prep according,incubated
R3264 T4727 T4726 prep to,according
R3265 T4728 T4729 det the,manufacturers
R3266 T4729 T4730 poss manufacturers,directions
R3267 T4730 T4727 pobj directions,to
R3268 T4731 T4729 case ',manufacturers
R3269 T4732 T4670 punct .,incubated
R3270 T4734 T4735 compound Antibody,binding
R3271 T4735 T4736 nsubjpass binding,visualized
R3272 T4737 T4736 auxpass was,visualized
R3273 T4738 T4736 prep with,visualized
R3274 T4739 T4738 pobj diaminobenzidene,with
R3275 T4740 T4736 punct ", ",visualized
R3276 T4741 T4736 cc and,visualized
R3277 T4742 T4743 nsubjpass sections,counterstained
R3278 T4743 T4736 conj counterstained,visualized
R3279 T4744 T4743 auxpass were,counterstained
R3280 T4745 T4743 prep with,counterstained
R3281 T4746 T4745 pobj hematoxylin,with
R3282 T4747 T4743 punct .,counterstained
R3283 T4787 T4788 compound Filter,Assay
R3284 T4789 T4788 compound Trap,Assay
R3285 T4791 T4792 det An,aliquot
R3286 T4792 T4793 nsubjpass aliquot,solubilized
R3287 T4794 T4792 prep of,aliquot
R3288 T4795 T4796 det each,homogenate
R3289 T4796 T4794 pobj homogenate,of
R3290 T4797 T4796 amod cortical,homogenate
R3291 T4798 T4796 acl used,homogenate
R3292 T4799 T4798 prep for,used
R3293 T4800 T4801 compound Western,blotting
R3294 T4801 T4799 pobj blotting,for
R3295 T4802 T4798 advmod above,used
R3296 T4803 T4793 auxpass was,solubilized
R3297 T4804 T4793 advmod partially,solubilized
R3298 T4805 T4793 prep by,solubilized
R3299 T4806 T4807 det the,addition
R3300 T4807 T4805 pobj addition,by
R3301 T4808 T4807 prep of,addition
R3302 T4809 T4808 pobj SDS,of
R3303 T4810 T4793 prep to,solubilized
R3304 T4811 T4812 det a,concentration
R3305 T4812 T4810 pobj concentration,to
R3306 T4813 T4812 amod final,concentration
R3307 T4814 T4812 prep of,concentration
R3308 T4815 T4816 nummod 1,%
R3309 T4816 T4814 pobj %,of
R3310 T4817 T4793 punct .,solubilized
R3311 T4819 T4820 amod Serial,dilutions
R3312 T4820 T4824 nsubjpass dilutions,made
R3313 T4821 T4820 nummod 1,dilutions
R3314 T4822 T4823 punct :,2
R3315 T4823 T4821 prep 2,1
R3316 T4825 T4824 auxpass were,made
R3317 T4826 T4824 prep with,made
R3318 T4827 T4828 nummod 1,PBS
R3319 T4828 T4826 pobj PBS,with
R3320 T4829 T4827 punct ×,1
R3321 T4830 T4828 punct /,PBS
R3322 T4831 T4832 nummod 1,%
R3323 T4832 T4833 compound %,SDS
R3324 T4833 T4828 appos SDS,PBS
R3325 T4834 T4824 punct ", ",made
R3326 T4835 T4824 cc and,made
R3327 T4836 T4837 nummod 100,μl
R3328 T4837 T4838 nsubjpass μl,filtered
R3329 T4838 T4824 conj filtered,made
R3330 T4839 T4837 prep of,μl
R3331 T4840 T4841 det each,dilution
R3332 T4841 T4839 pobj dilution,of
R3333 T4842 T4838 auxpass was,filtered
R3334 T4843 T4838 advmod then,filtered
R3335 T4844 T4838 dep vacuum,filtered
R3336 T4845 T4838 punct -,filtered
R3337 T4846 T4838 prep through,filtered
R3338 T4847 T4848 det a,membrane
R3339 T4848 T4846 pobj membrane,through
R3340 T4849 T4848 amod pre-wet,membrane
R3341 T4850 T4851 nummod 0.22,μm
R3342 T4851 T4848 compound μm,membrane
R3343 T4852 T4851 punct -,μm
R3344 T4853 T4848 compound cellulose,membrane
R3345 T4854 T4848 compound acetate,membrane
R3346 T4855 T4856 punct (,Schleicher
R3347 T4856 T4848 parataxis Schleicher,membrane
R3348 T4857 T4856 cc and,Schleicher
R3349 T4858 T4856 conj Schuell,Schleicher
R3350 T4859 T4856 punct ),Schleicher
R3351 T4860 T4861 punct [,22
R3352 T4861 T4838 parataxis 22,filtered
R3353 T4862 T4861 punct ],22
R3354 T4863 T4838 punct .,filtered
R3355 T4865 T4866 det Each,well
R3356 T4866 T4867 nsubjpass well,washed
R3357 T4868 T4867 auxpass was,washed
R3358 T4869 T4870 amod several,times
R3359 T4870 T4867 dobj times,washed
R3360 T4871 T4867 prep with,washed
R3361 T4872 T4871 pobj PBS,with
R3362 T4873 T4867 punct ", ",washed
R3363 T4874 T4875 prep after,incubated
R3364 T4875 T4867 advcl incubated,washed
R3365 T4876 T4874 pobj which,after
R3366 T4877 T4875 nsubjpass blots,incubated
R3367 T4878 T4875 auxpass were,incubated
R3368 T4879 T4875 advmod overnight,incubated
R3369 T4880 T4875 prep with,incubated
R3370 T4881 T4882 amod polyclonal,antibody
R3371 T4882 T4880 pobj antibody,with
R3372 T4883 T4882 amod anti-Aβ,antibody
R3373 T4884 T4885 punct (,Laboratories
R3374 T4885 T4882 parataxis Laboratories,antibody
R3375 T4886 T4885 compound Zymed,Laboratories
R3376 T4887 T4885 punct ),Laboratories
R3377 T4888 T4882 acl diluted,antibody
R3378 T4889 T4888 npadvmod 1,diluted
R3379 T4890 T4891 punct :,600
R3380 T4891 T4889 prep 600,1
R3381 T4892 T4888 prep in,diluted
R3382 T4893 T4894 det a,solution
R3383 T4894 T4892 pobj solution,in
R3384 T4895 T4894 compound blocking,solution
R3385 T4896 T4894 prep of,solution
R3386 T4897 T4898 nummod 1,TBS
R3387 T4898 T4900 nmod TBS,powder
R3388 T4899 T4897 punct ×,1
R3389 T4900 T4896 pobj powder,of
R3390 T4901 T4898 punct /,TBS
R3391 T4902 T4903 nummod 5,%
R3392 T4903 T4904 nmod %,milk
R3393 T4904 T4898 appos milk,TBS
R3394 T4905 T4904 amod nonfat,milk
R3395 T4906 T4904 amod dry,milk
R3396 T4907 T4867 punct .,washed
R3397 T4909 T4910 prep After,incubated
R3398 T4911 T4909 pcomp washing,After
R3399 T4912 T4913 det the,blots
R3400 T4913 T4911 dobj blots,washing
R3401 T4914 T4915 nummod three,times
R3402 T4915 T4911 npadvmod times,washing
R3403 T4916 T4911 prep for,washing
R3404 T4917 T4918 nummod 10,min
R3405 T4918 T4916 pobj min,for
R3406 T4919 T4918 appos each,min
R3407 T4920 T4911 prep in,washing
R3408 T4921 T4922 nummod 1,TBS
R3409 T4922 T4920 pobj TBS,in
R3410 T4923 T4921 punct ×,1
R3411 T4924 T4922 punct /,TBS
R3412 T4925 T4926 nummod 0.1,%
R3413 T4926 T4927 compound %,Tween
R3414 T4927 T4922 appos Tween,TBS
R3415 T4928 T4927 punct -,Tween
R3416 T4929 T4927 nummod 20,Tween
R3417 T4930 T4910 punct ", ",incubated
R3418 T4931 T4932 det the,membrane
R3419 T4932 T4910 nsubjpass membrane,incubated
R3420 T4933 T4910 auxpass was,incubated
R3421 T4934 T4910 prep for,incubated
R3422 T4935 T4936 nummod 1,h
R3423 T4936 T4934 pobj h,for
R3424 T4937 T4910 prep with,incubated
R3425 T4938 T4939 npadvmod HRP,conjugated
R3426 T4939 T4941 amod conjugated,A
R3427 T4940 T4939 punct -,conjugated
R3428 T4941 T4937 pobj A,with
R3429 T4942 T4941 compound protein,A
R3430 T4943 T4944 punct (,Sigma
R3431 T4944 T4941 parataxis Sigma,A
R3432 T4945 T4944 punct ),Sigma
R3433 T4946 T4941 acl diluted,A
R3434 T4947 T4946 dobj 1,diluted
R3435 T4948 T4949 punct :,"5,000"
R3436 T4949 T4947 prep "5,000",1
R3437 T4950 T4946 prep in,diluted
R3438 T4951 T4952 compound blocking,solution
R3439 T4952 T4950 pobj solution,in
R3440 T4953 T4910 punct .,incubated
R3441 T4955 T4956 det The,membranes
R3442 T4956 T4957 nsubjpass membranes,washed
R3443 T4958 T4957 auxpass were,washed
R3444 T4959 T4957 advmod again,washed
R3445 T4960 T4961 nummod three,times
R3446 T4961 T4957 npadvmod times,washed
R3447 T4962 T4957 prep with,washed
R3448 T4963 T4964 nummod 1,TBS
R3449 T4964 T4962 pobj TBS,with
R3450 T4965 T4963 punct ×,1
R3451 T4966 T4964 punct /,TBS
R3452 T4967 T4968 nummod 0.1,%
R3453 T4968 T4969 compound %,Tween
R3454 T4969 T4964 appos Tween,TBS
R3455 T4970 T4969 punct -,Tween
R3456 T4971 T4969 nummod 20,Tween
R3457 T4972 T4957 punct ", ",washed
R3458 T4973 T4974 mark before,detected
R3459 T4974 T4957 advcl detected,washed
R3460 T4975 T4976 compound antibody,binding
R3461 T4976 T4974 nsubjpass binding,detected
R3462 T4977 T4974 auxpass was,detected
R3463 T4978 T4974 prep with,detected
R3464 T4979 T4980 amod enhanced,chemiluminescence
R3465 T4980 T4978 pobj chemiluminescence,with
R3466 T4981 T4982 punct (,PerkinElmer
R3467 T4982 T4974 parataxis PerkinElmer,detected
R3468 T4983 T4982 punct ", ",PerkinElmer
R3469 T4984 T4982 npadvmod Boston,PerkinElmer
R3470 T4985 T4982 punct ", ",PerkinElmer
R3471 T4986 T4982 npadvmod Massachusetts,PerkinElmer
R3472 T4987 T4982 punct ", ",PerkinElmer
R3473 T4988 T4989 compound United,States
R3474 T4989 T4982 npadvmod States,PerkinElmer
R3475 T4990 T4982 punct ),PerkinElmer
R3476 T4991 T4957 punct .,washed
R3477 T4993 T4994 amod Digital,images
R3478 T4994 T4995 nsubjpass images,captured
R3479 T4996 T4994 prep of,images
R3480 T4997 T4998 det each,blot
R3481 T4998 T4996 pobj blot,of
R3482 T4999 T4995 auxpass were,captured
R3483 T5000 T4995 prep with,captured
R3484 T5001 T5002 det a,system
R3485 T5002 T5000 pobj system,with
R3486 T5003 T5004 amod Molecular,Imager
R3487 T5004 T5005 compound Imager,FX
R3488 T5005 T5002 compound FX,system
R3489 T5006 T5007 compound gel,documentation
R3490 T5007 T5002 compound documentation,system
R3491 T5008 T4995 punct ", ",captured
R3492 T5009 T4995 cc and,captured
R3493 T5010 T5011 det the,intensity
R3494 T5011 T5012 nsubjpass intensity,quantified
R3495 T5012 T4995 conj quantified,captured
R3496 T5013 T5011 prep of,intensity
R3497 T5014 T5015 compound Aβ,staining
R3498 T5015 T5013 pobj staining,of
R3499 T5016 T5012 auxpass was,quantified
R3500 T5017 T5012 advcl using,quantified
R3501 T5018 T5019 nmod Quantity,software
R3502 T5019 T5017 dobj software,using
R3503 T5020 T5018 nummod One,Quantity
R3504 T5021 T5022 compound image,analysis
R3505 T5022 T5019 compound analysis,software
R3506 T5023 T5012 punct .,quantified
R3507 T5075 T5076 compound Aβ,ELISA
R3508 T5078 T5079 det An,aliquot
R3509 T5079 T5080 nsubjpass aliquot,subjected
R3510 T5081 T5079 prep of,aliquot
R3511 T5082 T5083 amod cortical,homogenate
R3512 T5083 T5081 pobj homogenate,of
R3513 T5084 T5083 acl generated,homogenate
R3514 T5085 T5084 prep for,generated
R3515 T5086 T5087 compound Western,analysis
R3516 T5087 T5085 pobj analysis,for
R3517 T5088 T5087 acl described,analysis
R3518 T5089 T5088 advmod above,described
R3519 T5090 T5080 auxpass was,subjected
R3520 T5091 T5080 prep to,subjected
R3521 T5092 T5093 det a,extraction
R3522 T5093 T5091 pobj extraction,to
R3523 T5094 T5095 nummod three,step
R3524 T5095 T5093 nmod step,extraction
R3525 T5096 T5095 punct -,step
R3526 T5097 T5093 amod sequential,extraction
R3527 T5098 T5080 advcl using,subjected
R3528 T5099 T5098 dobj PBS,using
R3529 T5100 T5099 punct ", ",PBS
R3530 T5101 T5102 nummod 2,%
R3531 T5102 T5103 compound %,SDS
R3532 T5103 T5099 conj SDS,PBS
R3533 T5104 T5103 punct ", ",SDS
R3534 T5105 T5103 cc and,SDS
R3535 T5106 T5107 nummod 70,%
R3536 T5107 T5103 conj %,SDS
R3537 T5108 T5109 amod formic,acid
R3538 T5109 T5107 appos acid,%
R3539 T5110 T5109 punct (,acid
R3540 T5111 T5109 appos FA,acid
R3541 T5112 T5080 punct ),subjected
R3542 T5113 T5080 punct .,subjected
R3543 T5115 T5116 prep At,sonicated
R3544 T5117 T5118 det each,step
R3545 T5118 T5115 pobj step,At
R3546 T5119 T5116 punct ", ",sonicated
R3547 T5120 T5121 det the,sample
R3548 T5121 T5116 nsubjpass sample,sonicated
R3549 T5122 T5116 auxpass was,sonicated
R3550 T5123 T5116 prep in,sonicated
R3551 T5124 T5125 amod appropriate,buffer
R3552 T5125 T5123 pobj buffer,in
R3553 T5126 T5116 cc and,sonicated
R3554 T5127 T5116 conj centrifuged,sonicated
R3555 T5128 T5127 prep at,centrifuged
R3556 T5129 T5128 pobj "100,000g",at
R3557 T5130 T5127 prep for,centrifuged
R3558 T5131 T5132 nummod 30,min
R3559 T5132 T5130 pobj min,for
R3560 T5133 T5134 punct (,samples
R3561 T5134 T5132 parataxis samples,min
R3562 T5135 T5136 quantmod 1,1.5
R3563 T5136 T5139 nummod 1.5,mo
R3564 T5137 T5136 punct -,1.5
R3565 T5138 T5136 quantmod to,1.5
R3566 T5139 T5134 compound mo,samples
R3567 T5140 T5139 punct -,mo
R3568 T5141 T5134 punct ),samples
R3569 T5142 T5132 cc or,min
R3570 T5143 T5144 nummod 60,min
R3571 T5144 T5132 conj min,min
R3572 T5145 T5146 punct (,samples
R3573 T5146 T5144 parataxis samples,min
R3574 T5147 T5148 quantmod 6,12
R3575 T5148 T5151 nummod 12,mo
R3576 T5149 T5148 punct -,12
R3577 T5150 T5148 quantmod to,12
R3578 T5151 T5146 compound mo,samples
R3579 T5152 T5151 punct -,mo
R3580 T5153 T5146 punct ),samples
R3581 T5154 T5127 prep at,centrifuged
R3582 T5155 T5156 nummod 4,°C
R3583 T5156 T5154 pobj °C,at
R3584 T5157 T5158 mark as,described
R3585 T5158 T5127 advcl described,centrifuged
R3586 T5159 T5158 advmod previously,described
R3587 T5160 T5161 punct [,23
R3588 T5161 T5127 parataxis 23,centrifuged
R3589 T5162 T5163 punct –,25
R3590 T5163 T5161 prep 25,23
R3591 T5164 T5161 punct ],23
R3592 T5165 T5116 punct .,sonicated
R3593 T5167 T5168 det The,supernatant
R3594 T5168 T5169 nsubjpass supernatant,removed
R3595 T5170 T5169 auxpass was,removed
R3596 T5171 T5169 prep for,removed
R3597 T5172 T5171 pobj analysis,for
R3598 T5173 T5169 punct ", ",removed
R3599 T5174 T5169 cc and,removed
R3600 T5175 T5176 det the,pellet
R3601 T5176 T5177 nsubjpass pellet,sonicated
R3602 T5177 T5169 conj sonicated,removed
R3603 T5178 T5177 auxpass was,sonicated
R3604 T5179 T5177 prep in,sonicated
R3605 T5180 T5181 det the,solution
R3606 T5181 T5179 pobj solution,in
R3607 T5182 T5181 amod next,solution
R3608 T5183 T5177 prep in,sonicated
R3609 T5184 T5183 pobj sequence,in
R3610 T5185 T5177 punct .,sonicated
R3611 T5187 T5188 det The,extracts
R3612 T5188 T5192 nsubjpass extracts,diluted
R3613 T5189 T5190 nummod 2,%
R3614 T5190 T5188 compound %,extracts
R3615 T5191 T5188 compound SDS,extracts
R3616 T5193 T5192 auxpass were,diluted
R3617 T5194 T5192 prep in,diluted
R3618 T5195 T5196 compound EC,buffer
R3619 T5196 T5194 pobj buffer,in
R3620 T5197 T5192 punct ", ",diluted
R3621 T5198 T5192 cc and,diluted
R3622 T5199 T5200 det the,extracts
R3623 T5200 T5202 nsubj extracts,neutralized
R3624 T5201 T5200 compound FA,extracts
R3625 T5202 T5192 conj neutralized,diluted
R3626 T5203 T5202 prep with,neutralized
R3627 T5204 T5205 compound 1M,buffer
R3628 T5205 T5203 pobj buffer,with
R3629 T5206 T5205 compound Tris,buffer
R3630 T5207 T5205 punct -,buffer
R3631 T5208 T5205 compound phosphate,buffer
R3632 T5209 T5210 punct (,pH
R3633 T5210 T5205 parataxis pH,buffer
R3634 T5211 T5210 nummod 11,pH
R3635 T5212 T5210 punct ),pH
R3636 T5213 T5214 advmod then,diluted
R3637 T5214 T5202 dep diluted,neutralized
R3638 T5215 T5214 prep with,diluted
R3639 T5216 T5217 compound EC,buffer
R3640 T5217 T5215 pobj buffer,with
R3641 T5218 T5219 amod prior,to
R3642 T5219 T5214 prep to,diluted
R3643 T5220 T5219 pobj testing,to
R3644 T5221 T5202 punct .,neutralized
R3645 T5223 T5224 amod Human,Aβ
R3646 T5224 T5225 nsubjpass Aβ,measured
R3647 T5226 T5225 auxpass was,measured
R3648 T5227 T5225 prep in,measured
R3649 T5228 T5229 det each,fraction
R3650 T5229 T5227 pobj fraction,in
R3651 T5230 T5225 advcl using,measured
R3652 T5231 T5230 dobj BAN50,using
R3653 T5232 T5230 prep for,using
R3654 T5233 T5232 pobj capture,for
R3655 T5234 T5235 punct (,16
R3656 T5235 T5233 parataxis 16,capture
R3657 T5236 T5235 compound epitope,16
R3658 T5237 T5235 compound Aβ1,16
R3659 T5238 T5235 punct –,16
R3660 T5239 T5235 punct ),16
R3661 T5240 T5230 cc and,using
R3662 T5241 T5230 conj BA27,using
R3663 T5242 T5241 cc and,BA27
R3664 T5243 T5241 conj BC05,BA27
R3665 T5244 T5241 prep for,BA27
R3666 T5245 T5244 pobj detection,for
R3667 T5246 T5247 punct (,Aβ40
R3668 T5247 T5245 parataxis Aβ40,detection
R3669 T5248 T5247 cc and,Aβ40
R3670 T5249 T5247 conj Aβ42,Aβ40
R3671 T5250 T5247 punct ", ",Aβ40
R3672 T5251 T5247 advmod respectively,Aβ40
R3673 T5252 T5247 punct ),Aβ40
R3674 T5253 T5254 punct (,Industries
R3675 T5254 T5245 parataxis Industries,detection
R3676 T5255 T5254 compound Takeda,Industries
R3677 T5256 T5254 compound Chemical,Industries
R3678 T5257 T5254 punct ", ",Industries
R3679 T5258 T5254 npadvmod Osaka,Industries
R3680 T5259 T5254 punct ", ",Industries
R3681 T5260 T5254 npadvmod Japan,Industries
R3682 T5261 T5254 punct ),Industries
R3683 T5262 T5225 punct .,measured
R3684 T5264 T5265 amod Total,Aβ
R3685 T5265 T5266 nsubjpass Aβ,measured
R3686 T5267 T5268 punct (,samples
R3687 T5268 T5265 parataxis samples,Aβ
R3688 T5269 T5268 dep mouse,samples
R3689 T5270 T5269 punct +,mouse
R3690 T5271 T5269 amod human,mouse
R3691 T5272 T5268 punct ;,samples
R3692 T5273 T5274 quantmod 1,1.5
R3693 T5274 T5277 nummod 1.5,mo
R3694 T5275 T5274 punct -,1.5
R3695 T5276 T5274 quantmod to,1.5
R3696 T5277 T5268 compound mo,samples
R3697 T5278 T5277 punct -,mo
R3698 T5279 T5268 advmod only,samples
R3699 T5280 T5268 punct ),samples
R3700 T5281 T5266 auxpass was,measured
R3701 T5282 T5266 prep in,measured
R3702 T5283 T5284 det each,fraction
R3703 T5284 T5282 pobj fraction,in
R3704 T5285 T5266 advcl using,measured
R3705 T5286 T5285 dobj BNT77,using
R3706 T5287 T5285 prep for,using
R3707 T5288 T5287 pobj capture,for
R3708 T5289 T5290 punct (,Aβ11
R3709 T5290 T5288 parataxis Aβ11,capture
R3710 T5291 T5290 compound epitope,Aβ11
R3711 T5292 T5290 punct –,Aβ11
R3712 T5293 T5290 nummod 28,Aβ11
R3713 T5294 T5290 punct ),Aβ11
R3714 T5295 T5285 cc and,using
R3715 T5296 T5285 conj BA27,using
R3716 T5297 T5296 cc and,BA27
R3717 T5298 T5296 conj BC05,BA27
R3718 T5299 T5296 prep for,BA27
R3719 T5300 T5299 pobj detection,for
R3720 T5301 T5266 punct .,measured
R3721 T5303 T5304 det All,values
R3722 T5304 T5305 nsubjpass values,calculated
R3723 T5306 T5305 auxpass were,calculated
R3724 T5307 T5305 prep as,calculated
R3725 T5308 T5307 pobj picomoles,as
R3726 T5309 T5308 prep per,picomoles
R3727 T5310 T5309 pobj gram,per
R3728 T5311 T5305 prep based,calculated
R3729 T5312 T5311 prep on,based
R3730 T5313 T5314 det the,weight
R3731 T5314 T5312 pobj weight,on
R3732 T5315 T5314 amod initial,weight
R3733 T5316 T5314 prep of,weight
R3734 T5317 T5318 amod cortical,tissue
R3735 T5318 T5316 pobj tissue,of
R3736 T5319 T5305 punct .,calculated
R3737 T5339 T5340 compound Activity,Monitoring
R3738 T5342 T5343 amod Daily,activity
R3739 T5343 T5345 nsubjpass activity,studied
R3740 T5344 T5343 amod basal,activity
R3741 T5346 T5345 auxpass was,studied
R3742 T5347 T5345 prep in,studied
R3743 T5348 T5349 nummod 28,mice
R3744 T5349 T5347 pobj mice,in
R3745 T5350 T5351 nmod CaMKIIα,ind
R3746 T5351 T5349 nmod ind,mice
R3747 T5352 T5351 punct -,ind
R3748 T5353 T5351 nmod tTA,ind
R3749 T5354 T5351 punct ×,ind
R3750 T5355 T5351 nmod tet,ind
R3751 T5356 T5351 punct -,ind
R3752 T5357 T5351 nmod APPswe,ind
R3753 T5358 T5351 punct /,ind
R3754 T5359 T5349 nmod line,mice
R3755 T5360 T5359 nummod 107,line
R3756 T5361 T5362 quantmod between,4
R3757 T5362 T5363 nummod 4,mo
R3758 T5363 T5349 npadvmod mo,mice
R3759 T5364 T5362 cc and,4
R3760 T5365 T5362 conj 5,4
R3761 T5366 T5363 prep of,mo
R3762 T5367 T5366 pobj age,of
R3763 T5368 T5345 punct .,studied
R3764 T5370 T5371 nsubjpass Animals,separated
R3765 T5372 T5371 auxpass were,separated
R3766 T5373 T5371 prep into,separated
R3767 T5374 T5375 amod individual,cages
R3768 T5375 T5373 pobj cages,into
R3769 T5376 T5377 advmod immediately,before
R3770 T5377 T5371 prep before,separated
R3771 T5378 T5379 det the,start
R3772 T5379 T5377 pobj start,before
R3773 T5380 T5379 prep of,start
R3774 T5381 T5382 det each,experiment
R3775 T5382 T5380 pobj experiment,of
R3776 T5383 T5384 punct (,6
R3777 T5384 T5371 parataxis 6,separated
R3778 T5385 T5384 nsubj n,6
R3779 T5386 T5384 punct =,6
R3780 T5387 T5384 quantmod 3,6
R3781 T5388 T5384 punct –,6
R3782 T5389 T5384 prep per,6
R3783 T5390 T5389 pobj genotype,per
R3784 T5391 T5390 amod untreated,genotype
R3785 T5392 T5384 punct ", ",6
R3786 T5393 T5394 quantmod 2,5
R3787 T5394 T5384 appos 5,6
R3788 T5395 T5394 punct –,5
R3789 T5396 T5394 prep per,5
R3790 T5397 T5396 pobj genotype,per
R3791 T5398 T5399 dep dox,reared
R3792 T5399 T5397 acl reared,genotype
R3793 T5400 T5399 punct -,reared
R3794 T5401 T5384 punct ),6
R3795 T5402 T5371 punct .,separated
R3796 T5404 T5405 det The,cages
R3797 T5405 T5406 nsubjpass cages,placed
R3798 T5407 T5406 auxpass were,placed
R3799 T5408 T5406 prep inside,placed
R3800 T5409 T5410 npadvmod activity,monitoring
R3801 T5410 T5412 amod monitoring,frames
R3802 T5411 T5410 punct -,monitoring
R3803 T5412 T5408 pobj frames,inside
R3804 T5413 T5412 acl designed,frames
R3805 T5414 T5415 aux to,count
R3806 T5415 T5413 advcl count,designed
R3807 T5416 T5417 det every,time
R3808 T5417 T5415 dobj time,count
R3809 T5418 T5419 det the,animal
R3810 T5419 T5420 nsubj animal,passed
R3811 T5420 T5417 advcl passed,time
R3812 T5421 T5420 prep through,passed
R3813 T5422 T5421 pobj one,through
R3814 T5423 T5422 prep of,one
R3815 T5424 T5425 nummod three,photobeams
R3816 T5425 T5423 pobj photobeams,of
R3817 T5426 T5425 acl spanning,photobeams
R3818 T5427 T5428 det the,width
R3819 T5428 T5426 dobj width,spanning
R3820 T5429 T5428 prep of,width
R3821 T5430 T5431 det the,cage
R3822 T5431 T5429 pobj cage,of
R3823 T5432 T5433 punct (,Instruments
R3824 T5433 T5420 parataxis Instruments,passed
R3825 T5434 T5435 compound San,Diego
R3826 T5435 T5433 compound Diego,Instruments
R3827 T5436 T5433 punct ", ",Instruments
R3828 T5437 T5438 compound San,Diego
R3829 T5438 T5433 npadvmod Diego,Instruments
R3830 T5439 T5433 punct ", ",Instruments
R3831 T5440 T5433 npadvmod California,Instruments
R3832 T5441 T5433 punct ", ",Instruments
R3833 T5442 T5443 compound United,States
R3834 T5443 T5433 npadvmod States,Instruments
R3835 T5444 T5433 punct ),Instruments
R3836 T5445 T5406 punct .,placed
R3837 T5447 T5448 nsubjpass Experiments,started
R3838 T5449 T5448 auxpass were,started
R3839 T5450 T5451 advmod midway,through
R3840 T5451 T5448 prep through,started
R3841 T5452 T5453 det the,phase
R3842 T5453 T5451 pobj phase,through
R3843 T5454 T5453 compound light,phase
R3844 T5455 T5453 prep of,phase
R3845 T5456 T5457 det the,day
R3846 T5457 T5455 pobj day,of
R3847 T5458 T5448 punct ", ",started
R3848 T5459 T5448 cc and,started
R3849 T5460 T5461 nsubjpass data,collected
R3850 T5461 T5448 conj collected,started
R3851 T5462 T5461 auxpass were,collected
R3852 T5463 T5461 prep in,collected
R3853 T5464 T5465 nummod 1,h
R3854 T5465 T5467 compound h,bins
R3855 T5466 T5465 punct -,h
R3856 T5467 T5463 pobj bins,in
R3857 T5468 T5461 prep for,collected
R3858 T5469 T5470 det the,h
R3859 T5470 T5468 pobj h,for
R3860 T5471 T5470 amod following,h
R3861 T5472 T5470 nummod 48,h
R3862 T5473 T5461 punct .,collected
R3863 T5475 T5476 compound Testing,rooms
R3864 T5476 T5477 nsubjpass rooms,maintained
R3865 T5478 T5477 auxpass were,maintained
R3866 T5479 T5477 prep on,maintained
R3867 T5480 T5481 det the,cycle
R3868 T5481 T5479 pobj cycle,on
R3869 T5482 T5481 amod same,cycle
R3870 T5483 T5484 nummod 13,h
R3871 T5484 T5481 nmod h,cycle
R3872 T5485 T5486 punct :,11
R3873 T5486 T5483 prep 11,13
R3874 T5487 T5481 nmod day,cycle
R3875 T5488 T5489 punct :,night
R3876 T5489 T5487 prep night,day
R3877 T5490 T5481 prep as,cycle
R3878 T5491 T5492 det the,areas
R3879 T5492 T5490 pobj areas,as
R3880 T5493 T5492 amod main,areas
R3881 T5494 T5495 compound animal,housing
R3882 T5495 T5492 compound housing,areas
R3883 T5496 T5477 cc and,maintained
R3884 T5497 T5498 auxpass were,closed
R3885 T5498 T5477 conj closed,maintained
R3886 T5499 T5498 prep to,closed
R3887 T5500 T5499 pobj entry,to
R3888 T5501 T5498 prep during,closed
R3889 T5502 T5503 det the,experiment
R3890 T5503 T5501 pobj experiment,during
R3891 T5504 T5477 punct .,maintained
R3892 T5510 T5511 amod Statistical,Analyses
R3893 T5513 T5514 amod Statistical,analyses
R3894 T5514 T5515 nsubjpass analyses,performed
R3895 T5516 T5514 prep of,analyses
R3896 T5517 T5518 compound protein,expression
R3897 T5518 T5516 pobj expression,of
R3898 T5519 T5518 punct ", ",expression
R3899 T5520 T5521 compound ELISA,data
R3900 T5521 T5518 conj data,expression
R3901 T5522 T5521 punct ", ",data
R3902 T5523 T5521 cc and,data
R3903 T5524 T5525 compound filter,trap
R3904 T5525 T5526 compound trap,assays
R3905 T5526 T5521 conj assays,data
R3906 T5527 T5515 auxpass were,performed
R3907 T5528 T5515 prep by,performed
R3908 T5529 T5528 pobj ANOVA,by
R3909 T5530 T5515 prep with,performed
R3910 T5531 T5532 poss Tukey,test
R3911 T5532 T5530 pobj test,with
R3912 T5533 T5531 case 's,Tukey
R3913 T5534 T5532 amod honest,test
R3914 T5535 T5532 amod significant,test
R3915 T5536 T5532 nmod difference,test
R3916 T5537 T5538 nmod post,hoc
R3917 T5538 T5532 nmod hoc,test
R3918 T5539 T5538 punct -,hoc
R3919 T5540 T5532 acl applied,test
R3920 T5541 T5540 prep to,applied
R3921 T5542 T5543 amod significant,effects
R3922 T5543 T5541 pobj effects,to
R3923 T5544 T5543 amod main,effects
R3924 T5545 T5543 cc or,effects
R3925 T5546 T5543 conj interactions,effects
R3926 T5547 T5548 punct (,Statistica
R3927 T5548 T5515 parataxis Statistica,performed
R3928 T5549 T5548 nummod 6.0,Statistica
R3929 T5550 T5548 punct ", ",Statistica
R3930 T5551 T5548 npadvmod StatSoft,Statistica
R3931 T5552 T5548 punct ", ",Statistica
R3932 T5553 T5548 npadvmod Tulsa,Statistica
R3933 T5554 T5548 punct ", ",Statistica
R3934 T5555 T5548 npadvmod Oklahoma,Statistica
R3935 T5556 T5548 punct ", ",Statistica
R3936 T5557 T5558 compound United,States
R3937 T5558 T5548 npadvmod States,Statistica
R3938 T5559 T5548 punct ),Statistica
R3939 T5560 T5515 punct .,performed
R3940 T5562 T5563 prep In,applied
R3941 T5564 T5562 pobj cases,In
R3942 T5565 T5564 prep of,cases
R3943 T5566 T5567 advmod positively,skewed
R3944 T5567 T5568 amod skewed,distribution
R3945 T5568 T5565 pobj distribution,of
R3946 T5569 T5568 compound data,distribution
R3947 T5570 T5563 punct ", ",applied
R3948 T5571 T5572 nmod log10,x
R3949 T5572 T5574 nmod x,transformation
R3950 T5573 T5572 punct (,x
R3951 T5574 T5563 nsubjpass transformation,applied
R3952 T5575 T5572 punct +,x
R3953 T5576 T5572 nummod 0.5,x
R3954 T5577 T5572 punct ),x
R3955 T5578 T5563 auxpass was,applied
R3956 T5579 T5563 prep to,applied
R3957 T5580 T5581 det the,data
R3958 T5581 T5579 pobj data,to
R3959 T5582 T5581 amod raw,data
R3960 T5583 T5563 prep before,applied
R3961 T5584 T5583 pcomp submitting,before
R3962 T5585 T5584 dobj them,submitting
R3963 T5586 T5584 prep to,submitting
R3964 T5587 T5586 pobj ANOVA,to
R3965 T5588 T5563 punct .,applied
R915 T1535 T1536 compound Transgene,Construction
R916 T1538 T1539 nsubj We,created
R917 T1540 T1541 det a,vector
R918 T1541 T1539 dobj vector,created
R919 T1542 T1543 npadvmod tetracycline,responsive
R920 T1543 T1541 amod responsive,vector
R921 T1544 T1543 punct -,responsive
R922 T1545 T1541 amod chimeric,vector
R923 T1546 T1541 nmod mouse,vector
R924 T1547 T1546 punct /,mouse
R925 T1548 T1546 amod human,mouse
R926 T1549 T1550 nmod APP695Swedish,Indiana
R927 T1550 T1541 nmod Indiana,vector
R928 T1551 T1550 punct /,Indiana
R929 T1552 T1550 punct (,Indiana
R930 T1553 T1554 compound swe,ind
R931 T1554 T1550 appos ind,Indiana
R932 T1555 T1554 punct /,ind
R933 T1556 T1541 punct ),vector
R934 T1557 T1539 prep by,created
R935 T1558 T1557 pcomp replacing,by
R936 T1559 T1560 det the,region
R937 T1560 T1558 dobj region,replacing
R938 T1561 T1560 compound promoter,region
R939 T1562 T1560 prep of,region
R940 T1563 T1564 det the,vector
R941 T1564 T1562 pobj vector,of
R942 T1565 T1564 compound moPrP.XhoI,vector
R943 T1566 T1567 punct (,known
R944 T1567 T1558 parataxis known,replacing
R945 T1568 T1567 advmod also,known
R946 T1569 T1567 prep as,known
R947 T1570 T1571 nmod pPrPpE1,3sal
R948 T1571 T1569 pobj 3sal,as
R949 T1572 T1571 punct /,3sal
R950 T1573 T1571 nmod E2,3sal
R951 T1574 T1571 punct ",",3sal
R952 T1575 T1576 punct [,15
R953 T1576 T1567 parataxis 15,known
R954 T1577 T1576 punct ],15
R955 T1578 T1567 punct ),known
R956 T1579 T1558 prep with,replacing
R957 T1580 T1581 det the,promoter
R958 T1581 T1579 pobj promoter,with
R959 T1582 T1583 npadvmod tetracycline,responsive
R960 T1583 T1581 amod responsive,promoter
R961 T1584 T1583 punct -,responsive
R962 T1585 T1581 prep of,promoter
R963 T1586 T1585 pobj pTetSplice,of
R964 T1587 T1588 punct (,Technologies
R965 T1588 T1586 parataxis Technologies,pTetSplice
R966 T1589 T1588 compound Life,Technologies
R967 T1590 T1588 punct ", ",Technologies
R968 T1591 T1588 npadvmod Rockville,Technologies
R969 T1592 T1588 punct ", ",Technologies
R970 T1593 T1588 npadvmod Maryland,Technologies
R971 T1594 T1588 punct ", ",Technologies
R972 T1595 T1596 compound United,States
R973 T1596 T1588 npadvmod States,Technologies
R974 T1597 T1588 punct ),Technologies
R975 T1598 T1558 punct ", ",replacing
R976 T1599 T1558 cc and,replacing
R977 T1600 T1601 advmod then,ligating
R978 T1601 T1558 conj ligating,replacing
R979 T1602 T1603 compound mouse,APP
R980 T1603 T1601 dobj APP,ligating
R981 T1604 T1601 prep with,ligating
R982 T1605 T1606 det a,domain
R983 T1606 T1609 nmod domain,cDNA
R984 T1607 T1606 amod humanized,domain
R985 T1608 T1606 nmod Aβ,domain
R986 T1609 T1604 pobj cDNA,with
R987 T1610 T1606 punct (,domain
R988 T1611 T1612 compound mo,huAPP695
R989 T1612 T1606 appos huAPP695,domain
R990 T1613 T1612 punct /,huAPP695
R991 T1614 T1609 punct ),cDNA
R992 T1615 T1601 prep into,ligating
R993 T1616 T1617 det the,vector
R994 T1617 T1615 pobj vector,into
R995 T1618 T1617 amod new,vector
R996 T1619 T1539 punct .,created
R997 T1621 T1622 nsubj We,began
R998 T1623 T1622 prep by,began
R999 T1624 T1623 pcomp cloning,by