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PMC:1208879 / 9983-10630 JSONTXT 4 Projects

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Id Subject Object Predicate Lexical cue
T2842 0-2 TO denotes To
T2843 3-8 VB denotes check
T2845 9-13 IN denotes that
T2847 14-17 DT denotes the
T2849 18-24 NN denotes Homer3
T2850 24-26 , denotes ,
T2851 26-31 NN denotes Dncl1
T2852 32-35 CC denotes and
T2853 36-42 NN denotes Trim11
T2848 43-49 NNS denotes clones
T2854 50-54 VBD denotes were
T2855 55-58 RB denotes not
T2846 59-69 VBN denotes identified
T2856 70-78 JJ denotes multiple
T2857 79-84 NNS denotes times
T2858 85-91 RB denotes solely
T2860 92-99 IN denotes because
T2861 100-104 PRP denotes they
T2859 105-108 VBP denotes are
T2862 109-115 RB denotes highly
T2863 116-124 JJ denotes abundant
T2864 125-127 IN denotes in
T2865 128-131 DT denotes the
T2866 132-139 NN denotes library
T2867 139-141 , denotes ,
T2868 141-143 PRP denotes we
T2844 144-153 VBD denotes performed
T2869 154-155 DT denotes a
T2871 156-173 JJ denotes semi-quantitative
T2872 174-177 NN denotes PCR
T2870 178-183 NN denotes assay
T2873 183-184 . denotes .
T2874 184-276 sentence denotes We compared the relative abundance of Homer3, Dncl1, Trim11 and Pax6 with Gapdh and Atp5a1.
T2875 185-187 PRP denotes We
T2876 188-196 VBD denotes compared
T2877 197-200 DT denotes the
T2879 201-209 JJ denotes relative
T2878 210-219 NN denotes abundance
T2880 220-222 IN denotes of
T2881 223-229 NN denotes Homer3
T2882 229-231 , denotes ,
T2883 231-236 NN denotes Dncl1
T2884 236-238 , denotes ,
T2885 238-244 NN denotes Trim11
T2886 245-248 CC denotes and
T2887 249-253 NN denotes Pax6
T2888 254-258 IN denotes with
T2889 259-264 NN denotes Gapdh
T2890 265-268 CC denotes and
T2891 269-275 NN denotes Atp5a1
T2892 275-276 . denotes .
T2893 276-387 sentence denotes Gapdh and Atp5a1 both show strong constitutive expression in a variety of tissues including the brain [29,30].
T2894 277-282 NN denotes Gapdh
T2896 283-286 CC denotes and
T2897 287-293 NN denotes Atp5a1
T2898 294-298 DT denotes both
T2895 299-303 VBP denotes show
T2899 304-310 JJ denotes strong
T2901 311-323 JJ denotes constitutive
T2900 324-334 NN denotes expression
T2902 335-337 IN denotes in
T2903 338-339 DT denotes a
T2904 340-347 NN denotes variety
T2905 348-350 IN denotes of
T2906 351-358 NNS denotes tissues
T2907 359-368 VBG denotes including
T2908 369-372 DT denotes the
T2909 373-378 NN denotes brain
T2910 379-380 -LRB- denotes [
T2912 380-382 CD denotes 29
T2913 382-383 , denotes ,
T2911 383-385 CD denotes 30
T2914 385-386 -RRB- denotes ]
T2915 386-387 . denotes .
T2916 387-647 sentence denotes Homer3, Dncl1, Trim11 and Pax6 were only amplified strongly after 35 cycles of PCR (Figure 2) and were therefore present at relatively low levels compared to Gapdh (amplified strongly after 25 cycles) and Atp5a1 (amplified strongly after 30 cycles; Figure 2).
T2917 388-394 NN denotes Homer3
T2919 394-396 , denotes ,
T2920 396-401 NN denotes Dncl1
T2921 401-403 , denotes ,
T2922 403-409 NN denotes Trim11
T2923 410-413 CC denotes and
T2924 414-418 NN denotes Pax6
T2925 419-423 VBD denotes were
T2926 424-428 RB denotes only
T2918 429-438 VBN denotes amplified
T2927 439-447 RB denotes strongly
T2928 448-453 IN denotes after
T2929 454-456 CD denotes 35
T2930 457-463 NNS denotes cycles
T2931 464-466 IN denotes of
T2932 467-470 NN denotes PCR
T2933 471-472 -LRB- denotes (
T2934 472-478 NN denotes Figure
T2935 479-480 CD denotes 2
T2936 480-481 -RRB- denotes )
T2937 482-485 CC denotes and
T2938 486-490 VBD denotes were
T2939 491-500 RB denotes therefore
T2940 501-508 JJ denotes present
T2941 509-511 IN denotes at
T2942 512-522 RB denotes relatively
T2943 523-526 JJ denotes low
T2944 527-533 NNS denotes levels
T2945 534-542 VBN denotes compared
T2946 543-545 IN denotes to
T2947 546-551 NN denotes Gapdh
T2948 552-553 -LRB- denotes (
T2949 553-562 VBN denotes amplified
T2950 563-571 RB denotes strongly
T2951 572-577 IN denotes after
T2952 578-580 CD denotes 25
T2953 581-587 NNS denotes cycles
T2954 587-588 -RRB- denotes )
T2955 589-592 CC denotes and
T2956 593-599 NN denotes Atp5a1
T2957 600-601 -LRB- denotes (
T2958 601-610 VBN denotes amplified
T2959 611-619 RB denotes strongly
T2960 620-625 IN denotes after
T2961 626-628 CD denotes 30
T2962 629-635 NNS denotes cycles
T2963 635-636 : denotes ;
T2964 637-643 NN denotes Figure
T2965 644-645 CD denotes 2
T2966 645-646 -RRB- denotes )
T2967 646-647 . denotes .
R1748 T2842 T2843 aux To,check
R1749 T2843 T2844 advcl check,performed
R1750 T2845 T2846 mark that,identified
R1751 T2846 T2843 ccomp identified,check
R1752 T2847 T2848 det the,clones
R1753 T2848 T2846 nsubjpass clones,identified
R1754 T2849 T2848 nmod Homer3,clones
R1755 T2850 T2849 punct ", ",Homer3
R1756 T2851 T2849 conj Dncl1,Homer3
R1757 T2852 T2851 cc and,Dncl1
R1758 T2853 T2851 conj Trim11,Dncl1
R1759 T2854 T2846 auxpass were,identified
R1760 T2855 T2846 neg not,identified
R1761 T2856 T2857 amod multiple,times
R1762 T2857 T2846 npadvmod times,identified
R1763 T2858 T2859 advmod solely,are
R1764 T2859 T2846 advcl are,identified
R1765 T2860 T2859 mark because,are
R1766 T2861 T2859 nsubj they,are
R1767 T2862 T2863 advmod highly,abundant
R1768 T2863 T2859 acomp abundant,are
R1769 T2864 T2859 prep in,are
R1770 T2865 T2866 det the,library
R1771 T2866 T2864 pobj library,in
R1772 T2867 T2844 punct ", ",performed
R1773 T2868 T2844 nsubj we,performed
R1774 T2869 T2870 det a,assay
R1775 T2870 T2844 dobj assay,performed
R1776 T2871 T2870 amod semi-quantitative,assay
R1777 T2872 T2870 compound PCR,assay
R1778 T2873 T2844 punct .,performed
R1779 T2875 T2876 nsubj We,compared
R1780 T2877 T2878 det the,abundance
R1781 T2878 T2876 dobj abundance,compared
R1782 T2879 T2878 amod relative,abundance
R1783 T2880 T2878 prep of,abundance
R1784 T2881 T2880 pobj Homer3,of
R1785 T2882 T2881 punct ", ",Homer3
R1786 T2883 T2881 conj Dncl1,Homer3
R1787 T2884 T2883 punct ", ",Dncl1
R1788 T2885 T2883 conj Trim11,Dncl1
R1789 T2886 T2885 cc and,Trim11
R1790 T2887 T2885 conj Pax6,Trim11
R1791 T2888 T2876 prep with,compared
R1792 T2889 T2888 pobj Gapdh,with
R1793 T2890 T2889 cc and,Gapdh
R1794 T2891 T2889 conj Atp5a1,Gapdh
R1795 T2892 T2876 punct .,compared
R1796 T2894 T2895 nsubj Gapdh,show
R1797 T2896 T2894 cc and,Gapdh
R1798 T2897 T2894 conj Atp5a1,Gapdh
R1799 T2898 T2894 appos both,Gapdh
R1800 T2899 T2900 amod strong,expression
R1801 T2900 T2895 dobj expression,show
R1802 T2901 T2900 amod constitutive,expression
R1803 T2902 T2895 prep in,show
R1804 T2903 T2904 det a,variety
R1805 T2904 T2902 pobj variety,in
R1806 T2905 T2904 prep of,variety
R1807 T2906 T2905 pobj tissues,of
R1808 T2907 T2906 prep including,tissues
R1809 T2908 T2909 det the,brain
R1810 T2909 T2907 pobj brain,including
R1811 T2910 T2911 punct [,30
R1812 T2911 T2895 parataxis 30,show
R1813 T2912 T2911 nummod 29,30
R1814 T2913 T2911 punct ",",30
R1815 T2914 T2911 punct ],30
R1816 T2915 T2895 punct .,show
R1817 T2917 T2918 nsubjpass Homer3,amplified
R1818 T2919 T2917 punct ", ",Homer3
R1819 T2920 T2917 conj Dncl1,Homer3
R1820 T2921 T2920 punct ", ",Dncl1
R1821 T2922 T2920 conj Trim11,Dncl1
R1822 T2923 T2922 cc and,Trim11
R1823 T2924 T2922 conj Pax6,Trim11
R1824 T2925 T2918 auxpass were,amplified
R1825 T2926 T2918 advmod only,amplified
R1826 T2927 T2918 advmod strongly,amplified
R1827 T2928 T2918 prep after,amplified
R1828 T2929 T2930 nummod 35,cycles
R1829 T2930 T2928 pobj cycles,after
R1830 T2931 T2930 prep of,cycles
R1831 T2932 T2931 pobj PCR,of
R1832 T2933 T2934 punct (,Figure
R1833 T2934 T2918 parataxis Figure,amplified
R1834 T2935 T2934 nummod 2,Figure
R1835 T2936 T2934 punct ),Figure
R1836 T2937 T2918 cc and,amplified
R1837 T2938 T2918 conj were,amplified
R1838 T2939 T2938 advmod therefore,were
R1839 T2940 T2938 acomp present,were
R1840 T2941 T2940 prep at,present
R1841 T2942 T2943 advmod relatively,low
R1842 T2943 T2944 amod low,levels
R1843 T2944 T2941 pobj levels,at
R1844 T2945 T2938 prep compared,were
R1845 T2946 T2945 prep to,compared
R1846 T2947 T2946 pobj Gapdh,to
R1847 T2948 T2947 punct (,Gapdh
R1848 T2949 T2947 acl amplified,Gapdh
R1849 T2950 T2949 advmod strongly,amplified
R1850 T2951 T2949 prep after,amplified
R1851 T2952 T2953 nummod 25,cycles
R1852 T2953 T2951 pobj cycles,after
R1853 T2954 T2947 punct ),Gapdh
R1854 T2955 T2947 cc and,Gapdh
R1855 T2956 T2947 conj Atp5a1,Gapdh
R1856 T2957 T2956 punct (,Atp5a1
R1857 T2958 T2956 acl amplified,Atp5a1
R1858 T2959 T2958 advmod strongly,amplified
R1859 T2960 T2958 prep after,amplified
R1860 T2961 T2962 nummod 30,cycles
R1861 T2962 T2960 pobj cycles,after
R1862 T2963 T2964 punct ;,Figure
R1863 T2964 T2938 parataxis Figure,were
R1864 T2965 T2964 nummod 2,Figure
R1865 T2966 T2964 punct ),Figure
R1866 T2967 T2918 punct .,amplified