| Id |
Subject |
Object |
Predicate |
Lexical cue |
| T5902 |
0-3 |
NN |
denotes |
QTL |
| T5903 |
4-11 |
NN |
denotes |
mapping |
| T5904 |
11-214 |
sentence |
denotes |
Linkage analysis was conducted on BXD mice using freely available software (Map Manager QTX [38]), and BXD genotype data shared by Robert W. Williams, University of Tennessee Health Science Center [45]. |
| T5905 |
12-19 |
NN |
denotes |
Linkage |
| T5906 |
20-28 |
NN |
denotes |
analysis |
| T5908 |
29-32 |
VBD |
denotes |
was |
| T5907 |
33-42 |
VBN |
denotes |
conducted |
| T5909 |
43-45 |
IN |
denotes |
on |
| T5910 |
46-49 |
NN |
denotes |
BXD |
| T5911 |
50-54 |
NNS |
denotes |
mice |
| T5912 |
55-60 |
VBG |
denotes |
using |
| T5913 |
61-67 |
RB |
denotes |
freely |
| T5914 |
68-77 |
JJ |
denotes |
available |
| T5915 |
78-86 |
NN |
denotes |
software |
| T5916 |
87-88 |
-LRB- |
denotes |
( |
| T5918 |
88-91 |
NN |
denotes |
Map |
| T5919 |
92-99 |
NN |
denotes |
Manager |
| T5920 |
100-103 |
NN |
denotes |
QTX |
| T5921 |
104-105 |
-LRB- |
denotes |
[ |
| T5917 |
105-107 |
CD |
denotes |
38 |
| T5922 |
107-108 |
-RRB- |
denotes |
] |
| T5923 |
108-109 |
-RRB- |
denotes |
) |
| T5924 |
109-111 |
, |
denotes |
, |
| T5925 |
111-114 |
CC |
denotes |
and |
| T5926 |
115-118 |
NN |
denotes |
BXD |
| T5928 |
119-127 |
NN |
denotes |
genotype |
| T5927 |
128-132 |
NNS |
denotes |
data |
| T5929 |
133-139 |
VBN |
denotes |
shared |
| T5930 |
140-142 |
IN |
denotes |
by |
| T5931 |
143-149 |
NNP |
denotes |
Robert |
| T5933 |
150-152 |
NNP |
denotes |
W. |
| T5932 |
153-161 |
NNP |
denotes |
Williams |
| T5934 |
161-163 |
, |
denotes |
, |
| T5935 |
163-173 |
NNP |
denotes |
University |
| T5937 |
174-176 |
IN |
denotes |
of |
| T5938 |
177-186 |
NNP |
denotes |
Tennessee |
| T5939 |
187-193 |
NNP |
denotes |
Health |
| T5940 |
194-201 |
NNP |
denotes |
Science |
| T5936 |
202-208 |
NNP |
denotes |
Center |
| T5941 |
209-210 |
-LRB- |
denotes |
[ |
| T5942 |
210-212 |
CD |
denotes |
45 |
| T5943 |
212-213 |
-RRB- |
denotes |
] |
| T5944 |
213-214 |
. |
denotes |
. |
| T5945 |
214-253 |
sentence |
denotes |
Simple interval mapping was conducted. |
| T5946 |
215-221 |
NN |
denotes |
Simple |
| T5948 |
222-230 |
NN |
denotes |
interval |
| T5947 |
231-238 |
NN |
denotes |
mapping |
| T5950 |
239-242 |
VBD |
denotes |
was |
| T5949 |
243-252 |
VBN |
denotes |
conducted |
| T5951 |
252-253 |
. |
denotes |
. |
| T5952 |
253-468 |
sentence |
denotes |
This method evaluates the association between trait values (lick ratios) and expected genotype of a hypothetical quantitative trait locus (QTL) at multiple analysis points between each pair of adjacent marker loci. |
| T5953 |
254-258 |
DT |
denotes |
This |
| T5954 |
259-265 |
NN |
denotes |
method |
| T5955 |
266-275 |
VBZ |
denotes |
evaluates |
| T5956 |
276-279 |
DT |
denotes |
the |
| T5957 |
280-291 |
NN |
denotes |
association |
| T5958 |
292-299 |
IN |
denotes |
between |
| T5959 |
300-305 |
NN |
denotes |
trait |
| T5960 |
306-312 |
NNS |
denotes |
values |
| T5961 |
313-314 |
-LRB- |
denotes |
( |
| T5962 |
314-318 |
NN |
denotes |
lick |
| T5963 |
319-325 |
NNS |
denotes |
ratios |
| T5964 |
325-326 |
-RRB- |
denotes |
) |
| T5965 |
327-330 |
CC |
denotes |
and |
| T5966 |
331-339 |
VBN |
denotes |
expected |
| T5967 |
340-348 |
NN |
denotes |
genotype |
| T5968 |
349-351 |
IN |
denotes |
of |
| T5969 |
352-353 |
DT |
denotes |
a |
| T5971 |
354-366 |
JJ |
denotes |
hypothetical |
| T5972 |
367-379 |
JJ |
denotes |
quantitative |
| T5973 |
380-385 |
NN |
denotes |
trait |
| T5970 |
386-391 |
NN |
denotes |
locus |
| T5974 |
392-393 |
-LRB- |
denotes |
( |
| T5975 |
393-396 |
NN |
denotes |
QTL |
| T5976 |
396-397 |
-RRB- |
denotes |
) |
| T5977 |
398-400 |
IN |
denotes |
at |
| T5978 |
401-409 |
JJ |
denotes |
multiple |
| T5980 |
410-418 |
NN |
denotes |
analysis |
| T5979 |
419-425 |
NNS |
denotes |
points |
| T5981 |
426-433 |
IN |
denotes |
between |
| T5982 |
434-438 |
DT |
denotes |
each |
| T5983 |
439-443 |
NN |
denotes |
pair |
| T5984 |
444-446 |
IN |
denotes |
of |
| T5985 |
447-455 |
JJ |
denotes |
adjacent |
| T5987 |
456-462 |
NN |
denotes |
marker |
| T5986 |
463-467 |
NNS |
denotes |
loci |
| T5988 |
467-468 |
. |
denotes |
. |
| T5989 |
468-579 |
sentence |
denotes |
The significance of each potential association is measured by the likelihood ratio statistic (LRS; e.g. [46]). |
| T5990 |
469-472 |
DT |
denotes |
The |
| T5991 |
473-485 |
NN |
denotes |
significance |
| T5993 |
486-488 |
IN |
denotes |
of |
| T5994 |
489-493 |
DT |
denotes |
each |
| T5996 |
494-503 |
JJ |
denotes |
potential |
| T5995 |
504-515 |
NN |
denotes |
association |
| T5997 |
516-518 |
VBZ |
denotes |
is |
| T5992 |
519-527 |
VBN |
denotes |
measured |
| T5998 |
528-530 |
IN |
denotes |
by |
| T5999 |
531-534 |
DT |
denotes |
the |
| T6001 |
535-545 |
NN |
denotes |
likelihood |
| T6002 |
546-551 |
NN |
denotes |
ratio |
| T6000 |
552-561 |
NN |
denotes |
statistic |
| T6003 |
562-563 |
-LRB- |
denotes |
( |
| T6004 |
563-566 |
NN |
denotes |
LRS |
| T6005 |
566-567 |
: |
denotes |
; |
| T6007 |
568-572 |
FW |
denotes |
e.g. |
| T6008 |
573-574 |
-LRB- |
denotes |
[ |
| T6006 |
574-576 |
CD |
denotes |
46 |
| T6009 |
576-577 |
-RRB- |
denotes |
] |
| T6010 |
577-578 |
-RRB- |
denotes |
) |
| T6011 |
578-579 |
. |
denotes |
. |
| T6012 |
579-680 |
sentence |
denotes |
Permutation analysis (x2000) was used to determine genome-wide significance criteria for LRS scores. |
| T6013 |
580-591 |
NN |
denotes |
Permutation |
| T6014 |
592-600 |
NN |
denotes |
analysis |
| T6016 |
601-602 |
-LRB- |
denotes |
( |
| T6018 |
602-603 |
SYM |
denotes |
x |
| T6017 |
603-607 |
CD |
denotes |
2000 |
| T6019 |
607-608 |
-RRB- |
denotes |
) |
| T6020 |
609-612 |
VBD |
denotes |
was |
| T6015 |
613-617 |
VBN |
denotes |
used |
| T6021 |
618-620 |
TO |
denotes |
to |
| T6022 |
621-630 |
VB |
denotes |
determine |
| T6023 |
631-637 |
NN |
denotes |
genome |
| T6025 |
637-638 |
HYPH |
denotes |
- |
| T6024 |
638-642 |
JJ |
denotes |
wide |
| T6027 |
643-655 |
NN |
denotes |
significance |
| T6026 |
656-664 |
NNS |
denotes |
criteria |
| T6028 |
665-668 |
IN |
denotes |
for |
| T6029 |
669-672 |
NN |
denotes |
LRS |
| T6030 |
673-679 |
NNS |
denotes |
scores |
| T6031 |
679-680 |
. |
denotes |
. |
| T6032 |
680-748 |
sentence |
denotes |
Significance was set at p < 0.05 and suggestive refers to p < 0.63. |
| T6033 |
681-693 |
NN |
denotes |
Significance |
| T6035 |
694-697 |
VBD |
denotes |
was |
| T6034 |
698-701 |
VBN |
denotes |
set |
| T6036 |
702-704 |
IN |
denotes |
at |
| T6037 |
705-706 |
NN |
denotes |
p |
| T6039 |
707-708 |
SYM |
denotes |
< |
| T6038 |
709-713 |
CD |
denotes |
0.05 |
| T6040 |
714-717 |
CC |
denotes |
and |
| T6041 |
718-728 |
JJ |
denotes |
suggestive |
| T6042 |
729-735 |
VBZ |
denotes |
refers |
| T6043 |
736-738 |
IN |
denotes |
to |
| T6044 |
739-740 |
NN |
denotes |
p |
| T6046 |
741-742 |
SYM |
denotes |
< |
| T6045 |
743-747 |
CD |
denotes |
0.63 |
| T6047 |
747-748 |
. |
denotes |
. |
| T6048 |
748-898 |
sentence |
denotes |
Additional markers used to refine the QTL on chromosome 6 were identified from the Jackson Laboratories online resources for the BXD RI strains [40]. |
| T6049 |
749-759 |
JJ |
denotes |
Additional |
| T6050 |
760-767 |
NNS |
denotes |
markers |
| T6052 |
768-772 |
VBN |
denotes |
used |
| T6053 |
773-775 |
TO |
denotes |
to |
| T6054 |
776-782 |
VB |
denotes |
refine |
| T6055 |
783-786 |
DT |
denotes |
the |
| T6056 |
787-790 |
NN |
denotes |
QTL |
| T6057 |
791-793 |
IN |
denotes |
on |
| T6058 |
794-804 |
NN |
denotes |
chromosome |
| T6059 |
805-806 |
CD |
denotes |
6 |
| T6060 |
807-811 |
VBD |
denotes |
were |
| T6051 |
812-822 |
VBN |
denotes |
identified |
| T6061 |
823-827 |
IN |
denotes |
from |
| T6062 |
828-831 |
DT |
denotes |
the |
| T6064 |
832-839 |
NNP |
denotes |
Jackson |
| T6065 |
840-852 |
NNP |
denotes |
Laboratories |
| T6066 |
853-859 |
NN |
denotes |
online |
| T6063 |
860-869 |
NNS |
denotes |
resources |
| T6067 |
870-873 |
IN |
denotes |
for |
| T6068 |
874-877 |
DT |
denotes |
the |
| T6070 |
878-881 |
NN |
denotes |
BXD |
| T6071 |
882-884 |
JJ |
denotes |
RI |
| T6069 |
885-892 |
NNS |
denotes |
strains |
| T6072 |
893-894 |
-LRB- |
denotes |
[ |
| T6073 |
894-896 |
CD |
denotes |
40 |
| T6074 |
896-897 |
-RRB- |
denotes |
] |
| T6075 |
897-898 |
. |
denotes |
. |
| R4383 |
T5902 |
T5903 |
compound |
QTL,mapping |
| R4384 |
T5905 |
T5906 |
compound |
Linkage,analysis |
| R4385 |
T5906 |
T5907 |
nsubjpass |
analysis,conducted |
| R4386 |
T5908 |
T5907 |
auxpass |
was,conducted |
| R4387 |
T5909 |
T5907 |
prep |
on,conducted |
| R4388 |
T5910 |
T5911 |
compound |
BXD,mice |
| R4389 |
T5911 |
T5909 |
pobj |
mice,on |
| R4390 |
T5912 |
T5907 |
advcl |
using,conducted |
| R4391 |
T5913 |
T5914 |
advmod |
freely,available |
| R4392 |
T5914 |
T5915 |
amod |
available,software |
| R4393 |
T5915 |
T5912 |
dobj |
software,using |
| R4394 |
T5916 |
T5917 |
punct |
(,38 |
| R4395 |
T5917 |
T5915 |
parataxis |
38,software |
| R4396 |
T5918 |
T5919 |
compound |
Map,Manager |
| R4397 |
T5919 |
T5920 |
compound |
Manager,QTX |
| R4398 |
T5920 |
T5917 |
dep |
QTX,38 |
| R4399 |
T5921 |
T5917 |
punct |
[,38 |
| R4400 |
T5922 |
T5917 |
punct |
],38 |
| R4401 |
T5923 |
T5917 |
punct |
),38 |
| R4402 |
T5924 |
T5915 |
punct |
", ",software |
| R4403 |
T5925 |
T5915 |
cc |
and,software |
| R4404 |
T5926 |
T5927 |
compound |
BXD,data |
| R4405 |
T5927 |
T5915 |
conj |
data,software |
| R4406 |
T5928 |
T5927 |
compound |
genotype,data |
| R4407 |
T5929 |
T5927 |
acl |
shared,data |
| R4408 |
T5930 |
T5929 |
agent |
by,shared |
| R4409 |
T5931 |
T5932 |
compound |
Robert,Williams |
| R4410 |
T5932 |
T5930 |
pobj |
Williams,by |
| R4411 |
T5933 |
T5932 |
compound |
W.,Williams |
| R4412 |
T5934 |
T5932 |
punct |
", ",Williams |
| R4413 |
T5935 |
T5936 |
nmod |
University,Center |
| R4414 |
T5936 |
T5932 |
npadvmod |
Center,Williams |
| R4415 |
T5937 |
T5935 |
prep |
of,University |
| R4416 |
T5938 |
T5937 |
pobj |
Tennessee,of |
| R4417 |
T5939 |
T5940 |
compound |
Health,Science |
| R4418 |
T5940 |
T5936 |
compound |
Science,Center |
| R4419 |
T5941 |
T5942 |
punct |
[,45 |
| R4420 |
T5942 |
T5929 |
parataxis |
45,shared |
| R4421 |
T5943 |
T5942 |
punct |
],45 |
| R4422 |
T5944 |
T5907 |
punct |
.,conducted |
| R4423 |
T5946 |
T5947 |
compound |
Simple,mapping |
| R4424 |
T5947 |
T5949 |
nsubjpass |
mapping,conducted |
| R4425 |
T5948 |
T5947 |
compound |
interval,mapping |
| R4426 |
T5950 |
T5949 |
auxpass |
was,conducted |
| R4427 |
T5951 |
T5949 |
punct |
.,conducted |
| R4428 |
T5953 |
T5954 |
det |
This,method |
| R4429 |
T5954 |
T5955 |
nsubj |
method,evaluates |
| R4430 |
T5956 |
T5957 |
det |
the,association |
| R4431 |
T5957 |
T5955 |
dobj |
association,evaluates |
| R4432 |
T5958 |
T5957 |
prep |
between,association |
| R4433 |
T5959 |
T5960 |
compound |
trait,values |
| R4434 |
T5960 |
T5958 |
pobj |
values,between |
| R4435 |
T5961 |
T5960 |
punct |
(,values |
| R4436 |
T5962 |
T5963 |
compound |
lick,ratios |
| R4437 |
T5963 |
T5960 |
appos |
ratios,values |
| R4438 |
T5964 |
T5960 |
punct |
),values |
| R4439 |
T5965 |
T5960 |
cc |
and,values |
| R4440 |
T5966 |
T5967 |
amod |
expected,genotype |
| R4441 |
T5967 |
T5960 |
conj |
genotype,values |
| R4442 |
T5968 |
T5967 |
prep |
of,genotype |
| R4443 |
T5969 |
T5970 |
det |
a,locus |
| R4444 |
T5970 |
T5968 |
pobj |
locus,of |
| R4445 |
T5971 |
T5970 |
amod |
hypothetical,locus |
| R4446 |
T5972 |
T5970 |
amod |
quantitative,locus |
| R4447 |
T5973 |
T5970 |
compound |
trait,locus |
| R4448 |
T5974 |
T5970 |
punct |
(,locus |
| R4449 |
T5975 |
T5970 |
appos |
QTL,locus |
| R4450 |
T5976 |
T5958 |
punct |
),between |
| R4451 |
T5977 |
T5955 |
prep |
at,evaluates |
| R4452 |
T5978 |
T5979 |
amod |
multiple,points |
| R4453 |
T5979 |
T5977 |
pobj |
points,at |
| R4454 |
T5980 |
T5979 |
compound |
analysis,points |
| R4455 |
T5981 |
T5979 |
prep |
between,points |
| R4456 |
T5982 |
T5983 |
det |
each,pair |
| R4457 |
T5983 |
T5981 |
pobj |
pair,between |
| R4458 |
T5984 |
T5983 |
prep |
of,pair |
| R4459 |
T5985 |
T5986 |
amod |
adjacent,loci |
| R4460 |
T5986 |
T5984 |
pobj |
loci,of |
| R4461 |
T5987 |
T5986 |
compound |
marker,loci |
| R4462 |
T5988 |
T5955 |
punct |
.,evaluates |
| R4463 |
T5990 |
T5991 |
det |
The,significance |
| R4464 |
T5991 |
T5992 |
nsubjpass |
significance,measured |
| R4465 |
T5993 |
T5991 |
prep |
of,significance |
| R4466 |
T5994 |
T5995 |
det |
each,association |
| R4467 |
T5995 |
T5993 |
pobj |
association,of |
| R4468 |
T5996 |
T5995 |
amod |
potential,association |
| R4469 |
T5997 |
T5992 |
auxpass |
is,measured |
| R4470 |
T5998 |
T5992 |
prep |
by,measured |
| R4471 |
T5999 |
T6000 |
det |
the,statistic |
| R4472 |
T6000 |
T5998 |
pobj |
statistic,by |
| R4473 |
T6001 |
T6000 |
compound |
likelihood,statistic |
| R4474 |
T6002 |
T6000 |
compound |
ratio,statistic |
| R4475 |
T6003 |
T6000 |
punct |
(,statistic |
| R4476 |
T6004 |
T6000 |
appos |
LRS,statistic |
| R4477 |
T6005 |
T6006 |
punct |
;,46 |
| R4478 |
T6006 |
T5992 |
parataxis |
46,measured |
| R4479 |
T6007 |
T6006 |
advmod |
e.g.,46 |
| R4480 |
T6008 |
T6006 |
punct |
[,46 |
| R4481 |
T6009 |
T6006 |
punct |
],46 |
| R4482 |
T6010 |
T6006 |
punct |
),46 |
| R4483 |
T6011 |
T5992 |
punct |
.,measured |
| R4484 |
T6013 |
T6014 |
compound |
Permutation,analysis |
| R4485 |
T6014 |
T6015 |
nsubjpass |
analysis,used |
| R4486 |
T6016 |
T6017 |
punct |
(,2000 |
| R4487 |
T6017 |
T6014 |
parataxis |
2000,analysis |
| R4488 |
T6018 |
T6017 |
punct |
x,2000 |
| R4489 |
T6019 |
T6017 |
punct |
),2000 |
| R4490 |
T6020 |
T6015 |
auxpass |
was,used |
| R4491 |
T6021 |
T6022 |
aux |
to,determine |
| R4492 |
T6022 |
T6015 |
advcl |
determine,used |
| R4493 |
T6023 |
T6024 |
npadvmod |
genome,wide |
| R4494 |
T6024 |
T6026 |
amod |
wide,criteria |
| R4495 |
T6025 |
T6024 |
punct |
-,wide |
| R4496 |
T6026 |
T6022 |
dobj |
criteria,determine |
| R4497 |
T6027 |
T6026 |
compound |
significance,criteria |
| R4498 |
T6028 |
T6022 |
prep |
for,determine |
| R4499 |
T6029 |
T6030 |
compound |
LRS,scores |
| R4500 |
T6030 |
T6028 |
pobj |
scores,for |
| R4501 |
T6031 |
T6015 |
punct |
.,used |
| R4502 |
T6033 |
T6034 |
nsubjpass |
Significance,set |
| R4503 |
T6035 |
T6034 |
auxpass |
was,set |
| R4504 |
T6036 |
T6034 |
prep |
at,set |
| R4505 |
T6037 |
T6038 |
nsubj |
p,0.05 |
| R4506 |
T6038 |
T6036 |
pcomp |
0.05,at |
| R4507 |
T6039 |
T6038 |
punct |
<,0.05 |
| R4508 |
T6040 |
T6034 |
cc |
and,set |
| R4509 |
T6041 |
T6042 |
nsubj |
suggestive,refers |
| R4510 |
T6042 |
T6034 |
conj |
refers,set |
| R4511 |
T6043 |
T6042 |
prep |
to,refers |
| R4512 |
T6044 |
T6045 |
nsubj |
p,0.63 |
| R4513 |
T6045 |
T6043 |
pcomp |
0.63,to |
| R4514 |
T6046 |
T6045 |
punct |
<,0.63 |
| R4515 |
T6047 |
T6042 |
punct |
.,refers |
| R4516 |
T6049 |
T6050 |
amod |
Additional,markers |
| R4517 |
T6050 |
T6051 |
nsubjpass |
markers,identified |
| R4518 |
T6052 |
T6050 |
acl |
used,markers |
| R4519 |
T6053 |
T6054 |
aux |
to,refine |
| R4520 |
T6054 |
T6052 |
advcl |
refine,used |
| R4521 |
T6055 |
T6056 |
det |
the,QTL |
| R4522 |
T6056 |
T6054 |
dobj |
QTL,refine |
| R4523 |
T6057 |
T6056 |
prep |
on,QTL |
| R4524 |
T6058 |
T6057 |
pobj |
chromosome,on |
| R4525 |
T6059 |
T6058 |
nummod |
6,chromosome |
| R4526 |
T6060 |
T6051 |
auxpass |
were,identified |
| R4527 |
T6061 |
T6051 |
prep |
from,identified |
| R4528 |
T6062 |
T6063 |
det |
the,resources |
| R4529 |
T6063 |
T6061 |
pobj |
resources,from |
| R4530 |
T6064 |
T6065 |
compound |
Jackson,Laboratories |
| R4531 |
T6065 |
T6063 |
compound |
Laboratories,resources |
| R4532 |
T6066 |
T6063 |
compound |
online,resources |
| R4533 |
T6067 |
T6063 |
prep |
for,resources |
| R4534 |
T6068 |
T6069 |
det |
the,strains |
| R4535 |
T6069 |
T6067 |
pobj |
strains,for |
| R4536 |
T6070 |
T6069 |
nmod |
BXD,strains |
| R4537 |
T6071 |
T6070 |
amod |
RI,BXD |
| R4538 |
T6072 |
T6073 |
punct |
[,40 |
| R4539 |
T6073 |
T6051 |
parataxis |
40,identified |
| R4540 |
T6074 |
T6073 |
punct |
],40 |
| R4541 |
T6075 |
T6051 |
punct |
.,identified |
