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PMC:1181811 / 16669-17541 JSONTXT 3 Projects

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Id Subject Object Predicate Lexical cue
T3150 0-1 NNS denotes T
T3149 0-1 sentence denotes T
T3152 1-3 DT denotes he
T3151 1-4 sentence denotes he
T3154 4-15 NN denotes variability
T3153 4-244 sentence denotes variability between orthologous receptors in these two inbred strains suggested that it might be possible to narrow the physical boundaries of the QHCl taste QTL by determining which Tas2r alleles are correlated with QHCl taste sensitivity.
T3156 16-23 IN denotes between
T3157 24-35 JJ denotes orthologous
T3158 36-45 NNS denotes receptors
T3159 46-48 IN denotes in
T3160 49-54 DT denotes these
T3162 55-58 CD denotes two
T3163 59-65 JJ denotes inbred
T3161 66-73 NNS denotes strains
T3155 74-83 VBD denotes suggested
T3164 84-88 IN denotes that
T3166 89-91 PRP denotes it
T3167 92-97 MD denotes might
T3165 98-100 VB denotes be
T3168 101-109 JJ denotes possible
T3169 110-112 TO denotes to
T3170 113-119 VB denotes narrow
T3171 120-123 DT denotes the
T3173 124-132 JJ denotes physical
T3172 133-143 NNS denotes boundaries
T3174 144-146 IN denotes of
T3175 147-150 DT denotes the
T3177 151-155 NN denotes QHCl
T3178 156-161 NN denotes taste
T3176 162-165 NN denotes QTL
T3179 166-168 IN denotes by
T3180 169-180 VBG denotes determining
T3181 181-186 WDT denotes which
T3183 187-192 NN denotes Tas2r
T3182 193-200 NNS denotes alleles
T3185 201-204 VBP denotes are
T3184 205-215 VBN denotes correlated
T3186 216-220 IN denotes with
T3187 221-225 NN denotes QHCl
T3188 226-231 NN denotes taste
T3189 232-243 NN denotes sensitivity
T3190 243-244 . denotes .
T3191 244-412 sentence denotes Therefore, we proceeded to screen genomic DNA from 29 available BXD RI lines, including the 17 that we had used in taste testing, for the Tas2r alleles they contained.
T3192 245-254 RB denotes Therefore
T3194 254-256 , denotes ,
T3195 256-258 PRP denotes we
T3193 259-268 VBD denotes proceeded
T3196 269-271 TO denotes to
T3197 272-278 VB denotes screen
T3198 279-286 JJ denotes genomic
T3199 287-290 NN denotes DNA
T3200 291-295 IN denotes from
T3201 296-298 CD denotes 29
T3203 299-308 JJ denotes available
T3204 309-312 NN denotes BXD
T3205 313-315 JJ denotes RI
T3202 316-321 NNS denotes lines
T3206 321-323 , denotes ,
T3207 323-332 VBG denotes including
T3208 333-336 DT denotes the
T3209 337-339 CD denotes 17
T3210 340-344 WDT denotes that
T3212 345-347 PRP denotes we
T3213 348-351 VBD denotes had
T3211 352-356 VBN denotes used
T3214 357-359 IN denotes in
T3215 360-365 NN denotes taste
T3216 366-373 NN denotes testing
T3217 373-375 , denotes ,
T3218 375-378 IN denotes for
T3219 379-382 DT denotes the
T3220 383-388 NN denotes Tas2r
T3221 389-396 VBZ denotes alleles
T3222 397-401 PRP denotes they
T3223 402-411 VBD denotes contained
T3224 411-412 . denotes .
T3225 412-613 sentence denotes In most cases, we were able to identify diagnostic restriction endonuclease digests that would allow us to quickly identify whether a particular Tas2r PCR product was amplified from a B6 or D2 allele.
T3226 413-415 IN denotes In
T3228 416-420 JJS denotes most
T3229 421-426 NNS denotes cases
T3230 426-428 , denotes ,
T3231 428-430 PRP denotes we
T3227 431-435 VBD denotes were
T3232 436-440 JJ denotes able
T3233 441-443 TO denotes to
T3234 444-452 VB denotes identify
T3235 453-463 JJ denotes diagnostic
T3237 464-475 NN denotes restriction
T3238 476-488 NN denotes endonuclease
T3236 489-496 NNS denotes digests
T3239 497-501 WDT denotes that
T3241 502-507 MD denotes would
T3240 508-513 VB denotes allow
T3242 514-516 PRP denotes us
T3244 517-519 TO denotes to
T3245 520-527 RB denotes quickly
T3243 528-536 VB denotes identify
T3246 537-544 IN denotes whether
T3248 545-546 DT denotes a
T3250 547-557 JJ denotes particular
T3251 558-563 NN denotes Tas2r
T3252 564-567 NN denotes PCR
T3249 568-575 NN denotes product
T3253 576-579 VBD denotes was
T3247 580-589 VBN denotes amplified
T3254 590-594 IN denotes from
T3255 595-596 DT denotes a
T3257 597-599 NN denotes B6
T3258 600-602 CC denotes or
T3259 603-605 NN denotes D2
T3256 606-612 NN denotes allele
T3260 612-613 . denotes .
T3261 613-744 sentence denotes We did not analyze three genes (Tas2r104, Tas2r114 and Tas2r110) where no diagnostic restriction endonuclease could be identified.
T3262 614-616 PRP denotes We
T3264 617-620 VBD denotes did
T3265 621-624 RB denotes not
T3263 625-632 VB denotes analyze
T3266 633-638 CD denotes three
T3267 639-644 NNS denotes genes
T3268 645-646 -LRB- denotes (
T3269 646-654 NN denotes Tas2r104
T3270 654-656 , denotes ,
T3271 656-664 NN denotes Tas2r114
T3272 665-668 CC denotes and
T3273 669-677 NN denotes Tas2r110
T3274 677-678 -RRB- denotes )
T3275 679-684 WRB denotes where
T3277 685-687 DT denotes no
T3279 688-698 JJ denotes diagnostic
T3280 699-710 NN denotes restriction
T3278 711-723 NN denotes endonuclease
T3281 724-729 MD denotes could
T3282 730-732 VB denotes be
T3276 733-743 VBN denotes identified
T3283 743-744 . denotes .
T3284 744-872 sentence denotes For Tas2r120, which is likely deleted in D2 mice, the absence of a PCR product was diagnostic of the D2 genotype for this gene.
T3285 745-748 IN denotes For
T3287 749-757 NN denotes Tas2r120
T3288 757-759 , denotes ,
T3289 759-764 WDT denotes which
T3291 765-767 VBZ denotes is
T3292 768-774 RB denotes likely
T3290 775-782 VBN denotes deleted
T3293 783-785 IN denotes in
T3294 786-788 NN denotes D2
T3295 789-793 NNS denotes mice
T3296 793-795 , denotes ,
T3297 795-798 DT denotes the
T3298 799-806 NN denotes absence
T3299 807-809 IN denotes of
T3300 810-811 DT denotes a
T3302 812-815 NN denotes PCR
T3301 816-823 NN denotes product
T3286 824-827 VBD denotes was
T3303 828-838 JJ denotes diagnostic
T3304 839-841 IN denotes of
T3305 842-845 DT denotes the
T3307 846-848 NN denotes D2
T3306 849-857 NN denotes genotype
T3308 858-861 IN denotes for
T3309 862-866 DT denotes this
T3310 867-871 NN denotes gene
T3311 871-872 . denotes .
R2288 T3154 T3155 nsubj variability,suggested
R2289 T3156 T3154 prep between,variability
R2290 T3157 T3158 amod orthologous,receptors
R2291 T3158 T3156 pobj receptors,between
R2292 T3159 T3154 prep in,variability
R2293 T3160 T3161 det these,strains
R2294 T3161 T3159 pobj strains,in
R2295 T3162 T3161 nummod two,strains
R2296 T3163 T3161 amod inbred,strains
R2297 T3164 T3165 mark that,be
R2298 T3165 T3155 ccomp be,suggested
R2299 T3166 T3165 nsubj it,be
R2300 T3167 T3165 aux might,be
R2301 T3168 T3165 acomp possible,be
R2302 T3169 T3170 aux to,narrow
R2303 T3170 T3165 xcomp narrow,be
R2304 T3171 T3172 det the,boundaries
R2305 T3172 T3170 dobj boundaries,narrow
R2306 T3173 T3172 amod physical,boundaries
R2307 T3174 T3172 prep of,boundaries
R2308 T3175 T3176 det the,QTL
R2309 T3176 T3174 pobj QTL,of
R2310 T3177 T3178 compound QHCl,taste
R2311 T3178 T3176 compound taste,QTL
R2312 T3179 T3170 prep by,narrow
R2313 T3180 T3179 pcomp determining,by
R2314 T3181 T3182 det which,alleles
R2315 T3182 T3184 dep alleles,correlated
R2316 T3183 T3182 compound Tas2r,alleles
R2317 T3184 T3180 ccomp correlated,determining
R2318 T3185 T3184 auxpass are,correlated
R2319 T3186 T3184 prep with,correlated
R2320 T3187 T3188 compound QHCl,taste
R2321 T3188 T3189 compound taste,sensitivity
R2322 T3189 T3186 pobj sensitivity,with
R2323 T3190 T3155 punct .,suggested
R2324 T3192 T3193 advmod Therefore,proceeded
R2325 T3194 T3193 punct ", ",proceeded
R2326 T3195 T3193 nsubj we,proceeded
R2327 T3196 T3197 aux to,screen
R2328 T3197 T3193 xcomp screen,proceeded
R2329 T3198 T3199 amod genomic,DNA
R2330 T3199 T3197 dobj DNA,screen
R2331 T3200 T3199 prep from,DNA
R2332 T3201 T3202 nummod 29,lines
R2333 T3202 T3200 pobj lines,from
R2334 T3203 T3202 amod available,lines
R2335 T3204 T3202 nmod BXD,lines
R2336 T3205 T3202 amod RI,lines
R2337 T3206 T3202 punct ", ",lines
R2338 T3207 T3202 prep including,lines
R2339 T3208 T3209 det the,17
R2340 T3209 T3207 pobj 17,including
R2341 T3210 T3211 dep that,used
R2342 T3211 T3209 relcl used,17
R2343 T3212 T3211 nsubj we,used
R2344 T3213 T3211 aux had,used
R2345 T3214 T3211 prep in,used
R2346 T3215 T3216 compound taste,testing
R2347 T3216 T3214 pobj testing,in
R2348 T3217 T3197 punct ", ",screen
R2349 T3218 T3197 prep for,screen
R2350 T3219 T3220 det the,Tas2r
R2351 T3220 T3218 pobj Tas2r,for
R2352 T3221 T3220 nmod alleles,Tas2r
R2353 T3222 T3223 nsubj they,contained
R2354 T3223 T3220 advcl contained,Tas2r
R2355 T3224 T3193 punct .,proceeded
R2356 T3226 T3227 prep In,were
R2357 T3228 T3229 amod most,cases
R2358 T3229 T3226 pobj cases,In
R2359 T3230 T3227 punct ", ",were
R2360 T3231 T3227 nsubj we,were
R2361 T3232 T3227 acomp able,were
R2362 T3233 T3234 aux to,identify
R2363 T3234 T3232 xcomp identify,able
R2364 T3235 T3236 amod diagnostic,digests
R2365 T3236 T3234 dobj digests,identify
R2366 T3237 T3236 compound restriction,digests
R2367 T3238 T3236 compound endonuclease,digests
R2368 T3239 T3240 dep that,allow
R2369 T3240 T3236 relcl allow,digests
R2370 T3241 T3240 aux would,allow
R2371 T3242 T3243 nsubj us,identify
R2372 T3243 T3240 ccomp identify,allow
R2373 T3244 T3243 aux to,identify
R2374 T3245 T3243 advmod quickly,identify
R2375 T3246 T3247 mark whether,amplified
R2376 T3247 T3243 ccomp amplified,identify
R2377 T3248 T3249 det a,product
R2378 T3249 T3247 nsubjpass product,amplified
R2379 T3250 T3249 amod particular,product
R2380 T3251 T3249 compound Tas2r,product
R2381 T3252 T3249 compound PCR,product
R2382 T3253 T3247 auxpass was,amplified
R2383 T3254 T3247 prep from,amplified
R2384 T3255 T3256 det a,allele
R2385 T3256 T3254 pobj allele,from
R2386 T3257 T3256 nmod B6,allele
R2387 T3258 T3257 cc or,B6
R2388 T3259 T3257 conj D2,B6
R2389 T3260 T3227 punct .,were
R2390 T3262 T3263 nsubj We,analyze
R2391 T3264 T3263 aux did,analyze
R2392 T3265 T3263 neg not,analyze
R2393 T3266 T3267 nummod three,genes
R2394 T3267 T3263 dobj genes,analyze
R2395 T3268 T3267 punct (,genes
R2396 T3269 T3267 appos Tas2r104,genes
R2397 T3270 T3269 punct ", ",Tas2r104
R2398 T3271 T3269 conj Tas2r114,Tas2r104
R2399 T3272 T3271 cc and,Tas2r114
R2400 T3273 T3271 conj Tas2r110,Tas2r114
R2401 T3274 T3267 punct ),genes
R2402 T3275 T3276 advmod where,identified
R2403 T3276 T3267 relcl identified,genes
R2404 T3277 T3278 det no,endonuclease
R2405 T3278 T3276 nsubjpass endonuclease,identified
R2406 T3279 T3278 amod diagnostic,endonuclease
R2407 T3280 T3278 compound restriction,endonuclease
R2408 T3281 T3276 aux could,identified
R2409 T3282 T3276 auxpass be,identified
R2410 T3283 T3263 punct .,analyze
R2411 T3285 T3286 prep For,was
R2412 T3287 T3285 pobj Tas2r120,For
R2413 T3288 T3287 punct ", ",Tas2r120
R2414 T3289 T3290 dep which,deleted
R2415 T3290 T3287 relcl deleted,Tas2r120
R2416 T3291 T3290 auxpass is,deleted
R2417 T3292 T3290 advmod likely,deleted
R2418 T3293 T3290 prep in,deleted
R2419 T3294 T3295 compound D2,mice
R2420 T3295 T3293 pobj mice,in
R2421 T3296 T3286 punct ", ",was
R2422 T3297 T3298 det the,absence
R2423 T3298 T3286 nsubj absence,was
R2424 T3299 T3298 prep of,absence
R2425 T3300 T3301 det a,product
R2426 T3301 T3299 pobj product,of
R2427 T3302 T3301 compound PCR,product
R2428 T3303 T3286 acomp diagnostic,was
R2429 T3304 T3303 prep of,diagnostic
R2430 T3305 T3306 det the,genotype
R2431 T3306 T3304 pobj genotype,of
R2432 T3307 T3306 compound D2,genotype
R2433 T3308 T3306 prep for,genotype
R2434 T3309 T3310 det this,gene
R2435 T3310 T3308 pobj gene,for
R2436 T3311 T3286 punct .,was