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PMC:1166548 / 26351-26867 JSONTXT 4 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
T6258 0-5 JJ denotes Total
T6259 6-9 NN denotes RNA
T6261 10-13 VBD denotes was
T6260 14-23 VBN denotes extracted
T6262 24-28 IN denotes from
T6263 29-32 DT denotes the
T6265 33-39 JJ denotes entire
T6266 40-45 JJ denotes small
T6264 46-55 NN denotes intestine
T6267 56-58 IN denotes as
T6269 59-69 RB denotes previously
T6268 70-79 VBN denotes described
T6270 80-81 -LRB- denotes [
T6271 81-83 CD denotes 21
T6272 83-84 -RRB- denotes ]
T6273 84-85 . denotes .
T6274 85-210 sentence denotes Quantitative, real-time RT-PCR was used to measure expression of specific genes using the previously described primers [21].
T6275 86-98 JJ denotes Quantitative
T6277 98-100 , denotes ,
T6278 100-104 JJ denotes real
T6280 104-105 HYPH denotes -
T6279 105-109 NN denotes time
T6281 110-112 NN denotes RT
T6282 112-113 HYPH denotes -
T6276 113-116 NN denotes PCR
T6284 117-120 VBD denotes was
T6283 121-125 VBN denotes used
T6285 126-128 TO denotes to
T6286 129-136 VB denotes measure
T6287 137-147 NN denotes expression
T6288 148-150 IN denotes of
T6289 151-159 JJ denotes specific
T6290 160-165 NNS denotes genes
T6291 166-171 VBG denotes using
T6292 172-175 DT denotes the
T6294 176-186 RB denotes previously
T6295 187-196 VBN denotes described
T6293 197-204 NNS denotes primers
T6296 205-206 -LRB- denotes [
T6297 206-208 CD denotes 21
T6298 208-209 -RRB- denotes ]
T6299 209-210 . denotes .
T6300 210-341 sentence denotes Values were normalized to GAPDH mRNA and expression of this housekeeping gene is not altered in the CF mouse small intestine [21].
T6301 211-217 NNS denotes Values
T6303 218-222 VBD denotes were
T6302 223-233 VBN denotes normalized
T6304 234-236 IN denotes to
T6305 237-242 NN denotes GAPDH
T6306 243-247 NN denotes mRNA
T6307 248-251 CC denotes and
T6308 252-262 NN denotes expression
T6310 263-265 IN denotes of
T6311 266-270 DT denotes this
T6313 271-283 NN denotes housekeeping
T6312 284-288 NN denotes gene
T6314 289-291 VBZ denotes is
T6315 292-295 RB denotes not
T6309 296-303 VBN denotes altered
T6316 304-306 IN denotes in
T6317 307-310 DT denotes the
T6319 311-313 NN denotes CF
T6320 314-319 NN denotes mouse
T6321 320-325 JJ denotes small
T6318 326-335 NN denotes intestine
T6322 336-337 -LRB- denotes [
T6323 337-339 CD denotes 21
T6324 339-340 -RRB- denotes ]
T6325 340-341 . denotes .
T6326 341-516 sentence denotes Expression of the major intestinal mucin, Muc2, was also measured using the forward (5'-GAC TTC GAT GGA CAC TGC TC-3') and reverse (5'-CAC GGT GTT TAT CTA CCA AC-3') primers.
T6327 342-352 NN denotes Expression
T6329 353-355 IN denotes of
T6330 356-359 DT denotes the
T6332 360-365 JJ denotes major
T6333 366-376 JJ denotes intestinal
T6331 377-382 NN denotes mucin
T6334 382-384 , denotes ,
T6335 384-388 NN denotes Muc2
T6336 388-390 , denotes ,
T6337 390-393 VBD denotes was
T6338 394-398 RB denotes also
T6328 399-407 VBN denotes measured
T6339 408-413 VBG denotes using
T6340 414-417 DT denotes the
T6342 418-425 JJ denotes forward
T6343 426-427 -LRB- denotes (
T6345 427-428 CD denotes 5
T6346 428-429 SYM denotes '
T6347 429-430 HYPH denotes -
T6348 430-433 NN denotes GAC
T6349 434-437 NN denotes TTC
T6350 438-441 NN denotes GAT
T6351 442-445 NN denotes GGA
T6352 446-449 NN denotes CAC
T6353 450-453 NN denotes TGC
T6344 454-456 NN denotes TC
T6354 456-457 HYPH denotes -
T6355 457-458 CD denotes 3
T6356 458-459 SYM denotes '
T6357 459-460 -RRB- denotes )
T6358 461-464 CC denotes and
T6359 465-472 JJ denotes reverse
T6360 473-474 -LRB- denotes (
T6362 474-475 CD denotes 5
T6363 475-476 SYM denotes '
T6364 476-477 HYPH denotes -
T6365 477-480 NN denotes CAC
T6366 481-484 NN denotes GGT
T6367 485-488 NN denotes GTT
T6368 489-492 NN denotes TAT
T6369 493-496 NN denotes CTA
T6370 497-500 NN denotes CCA
T6361 501-503 NN denotes AC
T6371 503-504 HYPH denotes -
T6372 504-505 CD denotes 3
T6373 505-506 SYM denotes '
T6374 506-507 -RRB- denotes )
T6341 508-515 NNS denotes primers
T6375 515-516 . denotes .
R4159 T6258 T6259 amod Total,RNA
R4160 T6259 T6260 nsubjpass RNA,extracted
R4161 T6261 T6260 auxpass was,extracted
R4162 T6262 T6260 prep from,extracted
R4163 T6263 T6264 det the,intestine
R4164 T6264 T6262 pobj intestine,from
R4165 T6265 T6264 amod entire,intestine
R4166 T6266 T6264 amod small,intestine
R4167 T6267 T6268 mark as,described
R4168 T6268 T6260 advcl described,extracted
R4169 T6269 T6268 advmod previously,described
R4170 T6270 T6271 punct [,21
R4171 T6271 T6260 parataxis 21,extracted
R4172 T6272 T6271 punct ],21
R4173 T6273 T6260 punct .,extracted
R4174 T6275 T6276 amod Quantitative,PCR
R4175 T6276 T6283 nsubjpass PCR,used
R4176 T6277 T6276 punct ", ",PCR
R4177 T6278 T6279 amod real,time
R4178 T6279 T6276 compound time,PCR
R4179 T6280 T6279 punct -,time
R4180 T6281 T6276 compound RT,PCR
R4181 T6282 T6276 punct -,PCR
R4182 T6284 T6283 auxpass was,used
R4183 T6285 T6286 aux to,measure
R4184 T6286 T6283 advcl measure,used
R4185 T6287 T6286 dobj expression,measure
R4186 T6288 T6287 prep of,expression
R4187 T6289 T6290 amod specific,genes
R4188 T6290 T6288 pobj genes,of
R4189 T6291 T6286 advcl using,measure
R4190 T6292 T6293 det the,primers
R4191 T6293 T6291 dobj primers,using
R4192 T6294 T6295 advmod previously,described
R4193 T6295 T6293 amod described,primers
R4194 T6296 T6297 punct [,21
R4195 T6297 T6283 parataxis 21,used
R4196 T6298 T6297 punct ],21
R4197 T6299 T6283 punct .,used
R4198 T6301 T6302 nsubjpass Values,normalized
R4199 T6303 T6302 auxpass were,normalized
R4200 T6304 T6302 prep to,normalized
R4201 T6305 T6306 compound GAPDH,mRNA
R4202 T6306 T6304 pobj mRNA,to
R4203 T6307 T6302 cc and,normalized
R4204 T6308 T6309 nsubjpass expression,altered
R4205 T6309 T6302 conj altered,normalized
R4206 T6310 T6308 prep of,expression
R4207 T6311 T6312 det this,gene
R4208 T6312 T6310 pobj gene,of
R4209 T6313 T6312 compound housekeeping,gene
R4210 T6314 T6309 auxpass is,altered
R4211 T6315 T6309 neg not,altered
R4212 T6316 T6309 prep in,altered
R4213 T6317 T6318 det the,intestine
R4214 T6318 T6316 pobj intestine,in
R4215 T6319 T6320 nmod CF,mouse
R4216 T6320 T6318 nmod mouse,intestine
R4217 T6321 T6318 amod small,intestine
R4218 T6322 T6323 punct [,21
R4219 T6323 T6309 parataxis 21,altered
R4220 T6324 T6323 punct ],21
R4221 T6325 T6309 punct .,altered
R4222 T6327 T6328 nsubjpass Expression,measured
R4223 T6329 T6327 prep of,Expression
R4224 T6330 T6331 det the,mucin
R4225 T6331 T6329 pobj mucin,of
R4226 T6332 T6331 amod major,mucin
R4227 T6333 T6331 amod intestinal,mucin
R4228 T6334 T6331 punct ", ",mucin
R4229 T6335 T6331 appos Muc2,mucin
R4230 T6336 T6328 punct ", ",measured
R4231 T6337 T6328 auxpass was,measured
R4232 T6338 T6328 advmod also,measured
R4233 T6339 T6328 advcl using,measured
R4234 T6340 T6341 det the,primers
R4235 T6341 T6339 dobj primers,using
R4236 T6342 T6341 amod forward,primers
R4237 T6343 T6344 punct (,TC
R4238 T6344 T6342 parataxis TC,forward
R4239 T6345 T6344 nummod 5,TC
R4240 T6346 T6345 punct ',5
R4241 T6347 T6344 punct -,TC
R4242 T6348 T6344 compound GAC,TC
R4243 T6349 T6344 compound TTC,TC
R4244 T6350 T6344 compound GAT,TC
R4245 T6351 T6344 compound GGA,TC
R4246 T6352 T6344 compound CAC,TC
R4247 T6353 T6344 compound TGC,TC
R4248 T6354 T6344 punct -,TC
R4249 T6355 T6344 nummod 3,TC
R4250 T6356 T6344 punct ',TC
R4251 T6357 T6344 punct ),TC
R4252 T6358 T6342 cc and,forward
R4253 T6359 T6342 conj reverse,forward
R4254 T6360 T6361 punct (,AC
R4255 T6361 T6359 parataxis AC,reverse
R4256 T6362 T6361 nummod 5,AC
R4257 T6363 T6362 punct ',5
R4258 T6364 T6361 punct -,AC
R4259 T6365 T6361 compound CAC,AC
R4260 T6366 T6361 compound GGT,AC
R4261 T6367 T6361 compound GTT,AC
R4262 T6368 T6361 compound TAT,AC
R4263 T6369 T6361 compound CTA,AC
R4264 T6370 T6361 compound CCA,AC
R4265 T6371 T6361 punct -,AC
R4266 T6372 T6361 nummod 3,AC
R4267 T6373 T6361 punct ',AC
R4268 T6374 T6361 punct ),AC
R4269 T6375 T6328 punct .,measured