Id |
Subject |
Object |
Predicate |
Lexical cue |
T8790 |
11-14 |
NN |
denotes |
DNA |
T8791 |
15-23 |
NN |
denotes |
helicase |
T8792 |
24-26 |
VBZ |
denotes |
is |
T8793 |
27-28 |
DT |
denotes |
a |
T8795 |
29-36 |
JJ |
denotes |
central |
T8794 |
37-43 |
NN |
denotes |
factor |
T8796 |
44-47 |
IN |
denotes |
for |
T8797 |
48-57 |
NN |
denotes |
operation |
T8798 |
58-60 |
IN |
denotes |
of |
T8799 |
61-72 |
NN |
denotes |
replication |
T8800 |
73-78 |
NNS |
denotes |
forks |
T8801 |
78-79 |
. |
denotes |
. |
T8802 |
79-159 |
sentence |
denotes |
It also plays a crucial role in the initiation step at the replication origins. |
T8803 |
80-82 |
PRP |
denotes |
It |
T8805 |
83-87 |
RB |
denotes |
also |
T8804 |
88-93 |
VBZ |
denotes |
plays |
T8806 |
94-95 |
DT |
denotes |
a |
T8808 |
96-103 |
JJ |
denotes |
crucial |
T8807 |
104-108 |
NN |
denotes |
role |
T8809 |
109-111 |
IN |
denotes |
in |
T8810 |
112-115 |
DT |
denotes |
the |
T8812 |
116-126 |
NN |
denotes |
initiation |
T8811 |
127-131 |
NN |
denotes |
step |
T8813 |
132-134 |
IN |
denotes |
at |
T8814 |
135-138 |
DT |
denotes |
the |
T8816 |
139-150 |
NN |
denotes |
replication |
T8815 |
151-158 |
NNS |
denotes |
origins |
T8817 |
158-159 |
. |
denotes |
. |
T8818 |
159-357 |
sentence |
denotes |
Therefore, the elucidation of how the replicative helicases interact with DNA substrate and how they are activated is crucial for understanding the molecular basis of initiation of DNA replication. |
T8819 |
160-169 |
RB |
denotes |
Therefore |
T8821 |
169-171 |
, |
denotes |
, |
T8822 |
171-174 |
DT |
denotes |
the |
T8823 |
175-186 |
NN |
denotes |
elucidation |
T8824 |
187-189 |
IN |
denotes |
of |
T8825 |
190-193 |
WRB |
denotes |
how |
T8827 |
194-197 |
DT |
denotes |
the |
T8829 |
198-209 |
JJ |
denotes |
replicative |
T8828 |
210-219 |
NNS |
denotes |
helicases |
T8826 |
220-228 |
VBP |
denotes |
interact |
T8830 |
229-233 |
IN |
denotes |
with |
T8831 |
234-237 |
NN |
denotes |
DNA |
T8832 |
238-247 |
NN |
denotes |
substrate |
T8833 |
248-251 |
CC |
denotes |
and |
T8834 |
252-255 |
WRB |
denotes |
how |
T8836 |
256-260 |
PRP |
denotes |
they |
T8837 |
261-264 |
VBP |
denotes |
are |
T8835 |
265-274 |
VBN |
denotes |
activated |
T8820 |
275-277 |
VBZ |
denotes |
is |
T8838 |
278-285 |
JJ |
denotes |
crucial |
T8839 |
286-289 |
IN |
denotes |
for |
T8840 |
290-303 |
VBG |
denotes |
understanding |
T8841 |
304-307 |
DT |
denotes |
the |
T8843 |
308-317 |
JJ |
denotes |
molecular |
T8842 |
318-323 |
NN |
denotes |
basis |
T8844 |
324-326 |
IN |
denotes |
of |
T8845 |
327-337 |
NN |
denotes |
initiation |
T8846 |
338-340 |
IN |
denotes |
of |
T8847 |
341-344 |
NN |
denotes |
DNA |
T8848 |
345-356 |
NN |
denotes |
replication |
T8849 |
356-357 |
. |
denotes |
. |
T8850 |
357-446 |
sentence |
denotes |
It is now believed that Mcm is a major component of the eukaryotic replicative helicase. |
T8851 |
358-360 |
PRP |
denotes |
It |
T8853 |
361-363 |
VBZ |
denotes |
is |
T8854 |
364-367 |
RB |
denotes |
now |
T8852 |
368-376 |
VBN |
denotes |
believed |
T8855 |
377-381 |
IN |
denotes |
that |
T8857 |
382-385 |
NN |
denotes |
Mcm |
T8856 |
386-388 |
VBZ |
denotes |
is |
T8858 |
389-390 |
DT |
denotes |
a |
T8860 |
391-396 |
JJ |
denotes |
major |
T8859 |
397-406 |
NN |
denotes |
component |
T8861 |
407-409 |
IN |
denotes |
of |
T8862 |
410-413 |
DT |
denotes |
the |
T8864 |
414-424 |
JJ |
denotes |
eukaryotic |
T8865 |
425-436 |
JJ |
denotes |
replicative |
T8863 |
437-445 |
NN |
denotes |
helicase |
T8866 |
445-446 |
. |
denotes |
. |
T8867 |
446-611 |
sentence |
denotes |
In this report, we have conducted detailed analyses on binding and helicase actions of mouse Mcm4/6/7 using various substrates including fork and bubble structures. |
T8868 |
447-449 |
IN |
denotes |
In |
T8870 |
450-454 |
DT |
denotes |
this |
T8871 |
455-461 |
NN |
denotes |
report |
T8872 |
461-463 |
, |
denotes |
, |
T8873 |
463-465 |
PRP |
denotes |
we |
T8874 |
466-470 |
VBP |
denotes |
have |
T8869 |
471-480 |
VBN |
denotes |
conducted |
T8875 |
481-489 |
JJ |
denotes |
detailed |
T8876 |
490-498 |
NNS |
denotes |
analyses |
T8877 |
499-501 |
IN |
denotes |
on |
T8878 |
502-509 |
NN |
denotes |
binding |
T8880 |
510-513 |
CC |
denotes |
and |
T8881 |
514-522 |
NN |
denotes |
helicase |
T8879 |
523-530 |
NNS |
denotes |
actions |
T8882 |
531-533 |
IN |
denotes |
of |
T8883 |
534-539 |
NN |
denotes |
mouse |
T8884 |
540-544 |
NN |
denotes |
Mcm4 |
T8885 |
544-545 |
HYPH |
denotes |
/ |
T8886 |
545-546 |
CD |
denotes |
6 |
T8887 |
546-547 |
HYPH |
denotes |
/ |
T8888 |
547-548 |
CD |
denotes |
7 |
T8889 |
549-554 |
VBG |
denotes |
using |
T8890 |
555-562 |
JJ |
denotes |
various |
T8891 |
563-573 |
NNS |
denotes |
substrates |
T8892 |
574-583 |
VBG |
denotes |
including |
T8893 |
584-588 |
NN |
denotes |
fork |
T8895 |
589-592 |
CC |
denotes |
and |
T8896 |
593-599 |
NN |
denotes |
bubble |
T8894 |
600-610 |
NNS |
denotes |
structures |
T8897 |
610-611 |
. |
denotes |
. |
T9088 |
613-618 |
NNS |
denotes |
Modes |
T9089 |
619-621 |
IN |
denotes |
of |
T9090 |
622-629 |
NN |
denotes |
binding |
T9091 |
630-633 |
CC |
denotes |
and |
T9092 |
634-644 |
NN |
denotes |
activation |
T9093 |
645-647 |
IN |
denotes |
of |
T9094 |
648-652 |
NN |
denotes |
Mcm4 |
T9096 |
652-653 |
HYPH |
denotes |
/ |
T9097 |
653-654 |
CD |
denotes |
6 |
T9098 |
654-655 |
HYPH |
denotes |
/ |
T9099 |
655-656 |
CD |
denotes |
7 |
T9095 |
657-665 |
NN |
denotes |
helicase |
T9100 |
666-668 |
IN |
denotes |
on |
T9101 |
669-670 |
DT |
denotes |
a |
T9103 |
671-677 |
NN |
denotes |
bubble |
T9102 |
678-687 |
NN |
denotes |
structure |
T9104 |
687-794 |
sentence |
denotes |
Initiation of DNA replication is associated with localized melting of duplex DNA near replication origins. |
T9105 |
688-698 |
NN |
denotes |
Initiation |
T9107 |
699-701 |
IN |
denotes |
of |
T9108 |
702-705 |
NN |
denotes |
DNA |
T9109 |
706-717 |
NN |
denotes |
replication |
T9110 |
718-720 |
VBZ |
denotes |
is |
T9106 |
721-731 |
VBN |
denotes |
associated |
T9111 |
732-736 |
IN |
denotes |
with |
T9112 |
737-746 |
VBN |
denotes |
localized |
T9113 |
747-754 |
NN |
denotes |
melting |
T9114 |
755-757 |
IN |
denotes |
of |
T9115 |
758-764 |
NN |
denotes |
duplex |
T9116 |
765-768 |
NN |
denotes |
DNA |
T9117 |
769-773 |
JJ |
denotes |
near |
T9118 |
774-785 |
NN |
denotes |
replication |
T9119 |
786-793 |
NNS |
denotes |
origins |
T9120 |
793-794 |
. |
denotes |
. |
T9121 |
794-913 |
sentence |
denotes |
Helicases are loaded onto replication forks through the melted region, induced by initiator binding, in bacteria (32). |
T9122 |
795-804 |
NNS |
denotes |
Helicases |
T9124 |
805-808 |
VBP |
denotes |
are |
T9123 |
809-815 |
VBN |
denotes |
loaded |
T9125 |
816-820 |
IN |
denotes |
onto |
T9126 |
821-832 |
NN |
denotes |
replication |
T9127 |
833-838 |
NNS |
denotes |
forks |
T9128 |
839-846 |
IN |
denotes |
through |
T9129 |
847-850 |
DT |
denotes |
the |
T9131 |
851-857 |
VBN |
denotes |
melted |
T9130 |
858-864 |
NN |
denotes |
region |
T9132 |
864-866 |
, |
denotes |
, |
T9133 |
866-873 |
VBN |
denotes |
induced |
T9134 |
874-876 |
IN |
denotes |
by |
T9135 |
877-886 |
NN |
denotes |
initiator |
T9136 |
887-894 |
NN |
denotes |
binding |
T9137 |
894-896 |
, |
denotes |
, |
T9138 |
896-898 |
IN |
denotes |
in |
T9139 |
899-907 |
NNS |
denotes |
bacteria |
T9140 |
908-909 |
-LRB- |
denotes |
( |
T9141 |
909-911 |
CD |
denotes |
32 |
T9142 |
911-912 |
-RRB- |
denotes |
) |
T9143 |
912-913 |
. |
denotes |
. |
T9144 |
913-1044 |
sentence |
denotes |
We previously reported that Mcm4/6/7 can be loaded onto a bubble-like structure and can serve as a DNA helicase at the forks (13). |
T9145 |
914-916 |
PRP |
denotes |
We |
T9147 |
917-927 |
RB |
denotes |
previously |
T9146 |
928-936 |
VBD |
denotes |
reported |
T9148 |
937-941 |
IN |
denotes |
that |
T9150 |
942-946 |
NN |
denotes |
Mcm4 |
T9151 |
946-947 |
HYPH |
denotes |
/ |
T9152 |
947-948 |
CD |
denotes |
6 |
T9153 |
948-949 |
HYPH |
denotes |
/ |
T9154 |
949-950 |
CD |
denotes |
7 |
T9155 |
951-954 |
MD |
denotes |
can |
T9156 |
955-957 |
VB |
denotes |
be |
T9149 |
958-964 |
VBN |
denotes |
loaded |
T9157 |
965-969 |
IN |
denotes |
onto |
T9158 |
970-971 |
DT |
denotes |
a |
T9160 |
972-978 |
NN |
denotes |
bubble |
T9162 |
978-979 |
HYPH |
denotes |
- |
T9161 |
979-983 |
JJ |
denotes |
like |
T9159 |
984-993 |
NN |
denotes |
structure |
T9163 |
994-997 |
CC |
denotes |
and |
T9164 |
998-1001 |
MD |
denotes |
can |
T9165 |
1002-1007 |
VB |
denotes |
serve |
T9166 |
1008-1010 |
IN |
denotes |
as |
T9167 |
1011-1012 |
DT |
denotes |
a |
T9169 |
1013-1016 |
NN |
denotes |
DNA |
T9168 |
1017-1025 |
NN |
denotes |
helicase |
T9170 |
1026-1028 |
IN |
denotes |
at |
T9171 |
1029-1032 |
DT |
denotes |
the |
T9172 |
1033-1038 |
NNS |
denotes |
forks |
T9173 |
1039-1040 |
-LRB- |
denotes |
( |
T9174 |
1040-1042 |
CD |
denotes |
13 |
T9175 |
1042-1043 |
-RRB- |
denotes |
) |
T9176 |
1043-1044 |
. |
denotes |
. |
T9177 |
1044-1238 |
sentence |
denotes |
The ability of Mcm4/6/7 to unwind the bubble substrate but not the conventional duplex DNA (Figures 2 and 13) indicates that Mcm can be loaded through the single-stranded segment of the bubble. |
T9178 |
1045-1048 |
DT |
denotes |
The |
T9179 |
1049-1056 |
NN |
denotes |
ability |
T9181 |
1057-1059 |
IN |
denotes |
of |
T9182 |
1060-1064 |
NN |
denotes |
Mcm4 |
T9183 |
1064-1065 |
HYPH |
denotes |
/ |
T9184 |
1065-1066 |
CD |
denotes |
6 |
T9185 |
1066-1067 |
HYPH |
denotes |
/ |
T9186 |
1067-1068 |
CD |
denotes |
7 |
T9187 |
1069-1071 |
TO |
denotes |
to |
T9188 |
1072-1078 |
VB |
denotes |
unwind |
T9189 |
1079-1082 |
DT |
denotes |
the |
T9191 |
1083-1089 |
NN |
denotes |
bubble |
T9190 |
1090-1099 |
NN |
denotes |
substrate |
T9192 |
1100-1103 |
CC |
denotes |
but |
T9193 |
1104-1107 |
RB |
denotes |
not |
T9194 |
1108-1111 |
DT |
denotes |
the |
T9196 |
1112-1124 |
JJ |
denotes |
conventional |
T9197 |
1125-1131 |
NN |
denotes |
duplex |
T9195 |
1132-1135 |
NN |
denotes |
DNA |
T9198 |
1136-1137 |
-LRB- |
denotes |
( |
T9200 |
1137-1144 |
NNS |
denotes |
Figures |
T9199 |
1145-1146 |
CD |
denotes |
2 |
T9201 |
1147-1150 |
CC |
denotes |
and |
T9202 |
1151-1153 |
CD |
denotes |
13 |
T9203 |
1153-1154 |
-RRB- |
denotes |
) |
T9180 |
1155-1164 |
VBZ |
denotes |
indicates |
T9204 |
1165-1169 |
IN |
denotes |
that |
T9206 |
1170-1173 |
NN |
denotes |
Mcm |
T9207 |
1174-1177 |
MD |
denotes |
can |
T9208 |
1178-1180 |
VB |
denotes |
be |
T9205 |
1181-1187 |
VBN |
denotes |
loaded |
T9209 |
1188-1195 |
IN |
denotes |
through |
T9210 |
1196-1199 |
DT |
denotes |
the |
T9212 |
1200-1206 |
JJ |
denotes |
single |
T9214 |
1206-1207 |
HYPH |
denotes |
- |
T9213 |
1207-1215 |
VBN |
denotes |
stranded |
T9211 |
1216-1223 |
NN |
denotes |
segment |
T9215 |
1224-1226 |
IN |
denotes |
of |
T9216 |
1227-1230 |
DT |
denotes |
the |
T9217 |
1231-1237 |
NN |
denotes |
bubble |
T9218 |
1237-1238 |
. |
denotes |
. |
T9219 |
1238-1391 |
sentence |
denotes |
Furthermore, the Mcm4/6/7 complex displays marked preference for thymine-rich sequences within the single-stranded segment for helicase activation (13). |
T9220 |
1239-1250 |
RB |
denotes |
Furthermore |
T9222 |
1250-1252 |
, |
denotes |
, |
T9223 |
1252-1255 |
DT |
denotes |
the |
T9225 |
1256-1260 |
NN |
denotes |
Mcm4 |
T9226 |
1260-1261 |
HYPH |
denotes |
/ |
T9227 |
1261-1262 |
CD |
denotes |
6 |
T9228 |
1262-1263 |
HYPH |
denotes |
/ |
T9229 |
1263-1264 |
CD |
denotes |
7 |
T9224 |
1265-1272 |
NN |
denotes |
complex |
T9221 |
1273-1281 |
VBZ |
denotes |
displays |
T9230 |
1282-1288 |
JJ |
denotes |
marked |
T9231 |
1289-1299 |
NN |
denotes |
preference |
T9232 |
1300-1303 |
IN |
denotes |
for |
T9233 |
1304-1311 |
NN |
denotes |
thymine |
T9235 |
1311-1312 |
HYPH |
denotes |
- |
T9234 |
1312-1316 |
JJ |
denotes |
rich |
T9236 |
1317-1326 |
NNS |
denotes |
sequences |
T9237 |
1327-1333 |
IN |
denotes |
within |
T9238 |
1334-1337 |
DT |
denotes |
the |
T9240 |
1338-1344 |
JJ |
denotes |
single |
T9242 |
1344-1345 |
HYPH |
denotes |
- |
T9241 |
1345-1353 |
VBN |
denotes |
stranded |
T9239 |
1354-1361 |
NN |
denotes |
segment |
T9243 |
1362-1365 |
IN |
denotes |
for |
T9244 |
1366-1374 |
NN |
denotes |
helicase |
T9245 |
1375-1385 |
NN |
denotes |
activation |
T9246 |
1386-1387 |
-LRB- |
denotes |
( |
T9247 |
1387-1389 |
CD |
denotes |
13 |
T9248 |
1389-1390 |
-RRB- |
denotes |
) |
T9249 |
1390-1391 |
. |
denotes |
. |
T9250 |
1391-1699 |
sentence |
denotes |
The results in this report indicate that helicase action of Mcm4/6/7 on synthetic bubbles may depend on the presence of an unpaired region of sufficient length (at least 40 nt), which may permit assembly of a double-hexameric complex on the substrate DNA, similar to SV40 T-antigen protein (Figure 2A) (21). |
T9251 |
1392-1395 |
DT |
denotes |
The |
T9252 |
1396-1403 |
NNS |
denotes |
results |
T9254 |
1404-1406 |
IN |
denotes |
in |
T9255 |
1407-1411 |
DT |
denotes |
this |
T9256 |
1412-1418 |
NN |
denotes |
report |
T9253 |
1419-1427 |
VBP |
denotes |
indicate |
T9257 |
1428-1432 |
IN |
denotes |
that |
T9259 |
1433-1441 |
NN |
denotes |
helicase |
T9260 |
1442-1448 |
NN |
denotes |
action |
T9261 |
1449-1451 |
IN |
denotes |
of |
T9262 |
1452-1456 |
NN |
denotes |
Mcm4 |
T9263 |
1456-1457 |
HYPH |
denotes |
/ |
T9264 |
1457-1458 |
CD |
denotes |
6 |
T9265 |
1458-1459 |
HYPH |
denotes |
/ |
T9266 |
1459-1460 |
CD |
denotes |
7 |
T9267 |
1461-1463 |
IN |
denotes |
on |
T9268 |
1464-1473 |
JJ |
denotes |
synthetic |
T9269 |
1474-1481 |
NNS |
denotes |
bubbles |
T9270 |
1482-1485 |
MD |
denotes |
may |
T9258 |
1486-1492 |
VB |
denotes |
depend |
T9271 |
1493-1495 |
IN |
denotes |
on |
T9272 |
1496-1499 |
DT |
denotes |
the |
T9273 |
1500-1508 |
NN |
denotes |
presence |
T9274 |
1509-1511 |
IN |
denotes |
of |
T9275 |
1512-1514 |
DT |
denotes |
an |
T9277 |
1515-1523 |
JJ |
denotes |
unpaired |
T9276 |
1524-1530 |
NN |
denotes |
region |
T9278 |
1531-1533 |
IN |
denotes |
of |
T9279 |
1534-1544 |
JJ |
denotes |
sufficient |
T9280 |
1545-1551 |
NN |
denotes |
length |
T9281 |
1552-1553 |
-LRB- |
denotes |
( |
T9283 |
1553-1555 |
RB |
denotes |
at |
T9284 |
1556-1561 |
RBS |
denotes |
least |
T9285 |
1562-1564 |
CD |
denotes |
40 |
T9282 |
1565-1567 |
NN |
denotes |
nt |
T9286 |
1567-1568 |
-RRB- |
denotes |
) |
T9287 |
1568-1570 |
, |
denotes |
, |
T9288 |
1570-1575 |
WDT |
denotes |
which |
T9290 |
1576-1579 |
MD |
denotes |
may |
T9289 |
1580-1586 |
VB |
denotes |
permit |
T9291 |
1587-1595 |
NN |
denotes |
assembly |
T9292 |
1596-1598 |
IN |
denotes |
of |
T9293 |
1599-1600 |
DT |
denotes |
a |
T9295 |
1601-1607 |
JJ |
denotes |
double |
T9297 |
1607-1608 |
HYPH |
denotes |
- |
T9296 |
1608-1617 |
JJ |
denotes |
hexameric |
T9294 |
1618-1625 |
NN |
denotes |
complex |
T9298 |
1626-1628 |
IN |
denotes |
on |
T9299 |
1629-1632 |
DT |
denotes |
the |
T9301 |
1633-1642 |
NN |
denotes |
substrate |
T9300 |
1643-1646 |
NN |
denotes |
DNA |
T9302 |
1646-1648 |
, |
denotes |
, |
T9303 |
1648-1655 |
JJ |
denotes |
similar |
T9304 |
1656-1658 |
IN |
denotes |
to |
T9305 |
1659-1663 |
NN |
denotes |
SV40 |
T9307 |
1664-1665 |
NN |
denotes |
T |
T9309 |
1665-1666 |
HYPH |
denotes |
- |
T9308 |
1666-1673 |
NN |
denotes |
antigen |
T9306 |
1674-1681 |
NN |
denotes |
protein |
T9310 |
1682-1683 |
-LRB- |
denotes |
( |
T9312 |
1683-1689 |
NN |
denotes |
Figure |
T9311 |
1690-1692 |
NN |
denotes |
2A |
T9313 |
1692-1693 |
-RRB- |
denotes |
) |
T9314 |
1694-1695 |
-LRB- |
denotes |
( |
T9315 |
1695-1697 |
CD |
denotes |
21 |
T9316 |
1697-1698 |
-RRB- |
denotes |
) |
T9317 |
1698-1699 |
. |
denotes |
. |
T9318 |
1699-1858 |
sentence |
denotes |
When one strand of the single-stranded segment in T-rich bubble was replaced by guanine-rich sequences, the efficiency of unwinding was significantly reduced. |
T9319 |
1700-1704 |
WRB |
denotes |
When |
T9321 |
1705-1708 |
CD |
denotes |
one |
T9322 |
1709-1715 |
NN |
denotes |
strand |
T9323 |
1716-1718 |
IN |
denotes |
of |
T9324 |
1719-1722 |
DT |
denotes |
the |
T9326 |
1723-1729 |
JJ |
denotes |
single |
T9328 |
1729-1730 |
HYPH |
denotes |
- |
T9327 |
1730-1738 |
VBN |
denotes |
stranded |
T9325 |
1739-1746 |
NN |
denotes |
segment |
T9329 |
1747-1749 |
IN |
denotes |
in |
T9330 |
1750-1751 |
NN |
denotes |
T |
T9332 |
1751-1752 |
HYPH |
denotes |
- |
T9331 |
1752-1756 |
JJ |
denotes |
rich |
T9333 |
1757-1763 |
NN |
denotes |
bubble |
T9334 |
1764-1767 |
VBD |
denotes |
was |
T9320 |
1768-1776 |
VBN |
denotes |
replaced |
T9336 |
1777-1779 |
IN |
denotes |
by |
T9337 |
1780-1787 |
NN |
denotes |
guanine |
T9339 |
1787-1788 |
HYPH |
denotes |
- |
T9338 |
1788-1792 |
JJ |
denotes |
rich |
T9340 |
1793-1802 |
NNS |
denotes |
sequences |
T9341 |
1802-1804 |
, |
denotes |
, |
T9342 |
1804-1807 |
DT |
denotes |
the |
T9343 |
1808-1818 |
NN |
denotes |
efficiency |
T9344 |
1819-1821 |
IN |
denotes |
of |
T9345 |
1822-1831 |
NN |
denotes |
unwinding |
T9346 |
1832-1835 |
VBD |
denotes |
was |
T9347 |
1836-1849 |
RB |
denotes |
significantly |
T9335 |
1850-1857 |
VBN |
denotes |
reduced |
T9348 |
1857-1858 |
. |
denotes |
. |
T9349 |
1858-2042 |
sentence |
denotes |
Our footprinting analyses showed that Mcm4/6/7 strongly protects 25 nt single-stranded DNA segment adjacent to each branch point and proximal to 5′ ends of both strands of the bubble. |
T9350 |
1859-1862 |
PRP$ |
denotes |
Our |
T9352 |
1863-1875 |
NN |
denotes |
footprinting |
T9351 |
1876-1884 |
NNS |
denotes |
analyses |
T9353 |
1885-1891 |
VBD |
denotes |
showed |
T9354 |
1892-1896 |
IN |
denotes |
that |
T9356 |
1897-1901 |
NN |
denotes |
Mcm4 |
T9357 |
1901-1902 |
HYPH |
denotes |
/ |
T9358 |
1902-1903 |
CD |
denotes |
6 |
T9359 |
1903-1904 |
HYPH |
denotes |
/ |
T9360 |
1904-1905 |
CD |
denotes |
7 |
T9361 |
1906-1914 |
RB |
denotes |
strongly |
T9355 |
1915-1923 |
VBZ |
denotes |
protects |
T9362 |
1924-1926 |
CD |
denotes |
25 |
T9363 |
1927-1929 |
NN |
denotes |
nt |
T9365 |
1930-1936 |
JJ |
denotes |
single |
T9367 |
1936-1937 |
HYPH |
denotes |
- |
T9366 |
1937-1945 |
VBN |
denotes |
stranded |
T9368 |
1946-1949 |
NN |
denotes |
DNA |
T9364 |
1950-1957 |
NN |
denotes |
segment |
T9369 |
1958-1966 |
JJ |
denotes |
adjacent |
T9370 |
1967-1969 |
IN |
denotes |
to |
T9371 |
1970-1974 |
DT |
denotes |
each |
T9373 |
1975-1981 |
NN |
denotes |
branch |
T9372 |
1982-1987 |
NN |
denotes |
point |
T9374 |
1988-1991 |
CC |
denotes |
and |
T9375 |
1992-2000 |
JJ |
denotes |
proximal |
T9376 |
2001-2003 |
IN |
denotes |
to |
T9377 |
2004-2005 |
CD |
denotes |
5 |
T9379 |
2005-2006 |
SYM |
denotes |
′ |
T9378 |
2007-2011 |
NNS |
denotes |
ends |
T9380 |
2012-2014 |
IN |
denotes |
of |
T9381 |
2015-2019 |
DT |
denotes |
both |
T9382 |
2020-2027 |
NNS |
denotes |
strands |
T9383 |
2028-2030 |
IN |
denotes |
of |
T9384 |
2031-2034 |
DT |
denotes |
the |
T9385 |
2035-2041 |
NN |
denotes |
bubble |
T9386 |
2041-2042 |
. |
denotes |
. |
T9387 |
2042-2284 |
sentence |
denotes |
At each fork, one Mcm4/6/7 complex is likely to encircle the single-stranded DNA strand and two hexamers may bind symmetrically to the bubble substrate, forming a double hexameric structure on the bubble (see schematic drawing of Figure 1A). |
T9388 |
2043-2045 |
IN |
denotes |
At |
T9390 |
2046-2050 |
DT |
denotes |
each |
T9391 |
2051-2055 |
NN |
denotes |
fork |
T9392 |
2055-2057 |
, |
denotes |
, |
T9393 |
2057-2060 |
CD |
denotes |
one |
T9395 |
2061-2065 |
NN |
denotes |
Mcm4 |
T9396 |
2065-2066 |
HYPH |
denotes |
/ |
T9397 |
2066-2067 |
CD |
denotes |
6 |
T9398 |
2067-2068 |
HYPH |
denotes |
/ |
T9399 |
2068-2069 |
CD |
denotes |
7 |
T9394 |
2070-2077 |
NN |
denotes |
complex |
T9389 |
2078-2080 |
VBZ |
denotes |
is |
T9400 |
2081-2087 |
JJ |
denotes |
likely |
T9401 |
2088-2090 |
TO |
denotes |
to |
T9402 |
2091-2099 |
VB |
denotes |
encircle |
T9403 |
2100-2103 |
DT |
denotes |
the |
T9405 |
2104-2110 |
JJ |
denotes |
single |
T9407 |
2110-2111 |
HYPH |
denotes |
- |
T9406 |
2111-2119 |
VBN |
denotes |
stranded |
T9408 |
2120-2123 |
NN |
denotes |
DNA |
T9404 |
2124-2130 |
NN |
denotes |
strand |
T9409 |
2131-2134 |
CC |
denotes |
and |
T9410 |
2135-2138 |
CD |
denotes |
two |
T9411 |
2139-2147 |
NNS |
denotes |
hexamers |
T9413 |
2148-2151 |
MD |
denotes |
may |
T9412 |
2152-2156 |
VB |
denotes |
bind |
T9414 |
2157-2170 |
RB |
denotes |
symmetrically |
T9415 |
2171-2173 |
IN |
denotes |
to |
T9416 |
2174-2177 |
DT |
denotes |
the |
T9418 |
2178-2184 |
NN |
denotes |
bubble |
T9417 |
2185-2194 |
NN |
denotes |
substrate |
T9419 |
2194-2196 |
, |
denotes |
, |
T9420 |
2196-2203 |
VBG |
denotes |
forming |
T9421 |
2204-2205 |
DT |
denotes |
a |
T9423 |
2206-2212 |
JJ |
denotes |
double |
T9424 |
2213-2222 |
JJ |
denotes |
hexameric |
T9422 |
2223-2232 |
NN |
denotes |
structure |
T9425 |
2233-2235 |
IN |
denotes |
on |
T9426 |
2236-2239 |
DT |
denotes |
the |
T9427 |
2240-2246 |
NN |
denotes |
bubble |
T9428 |
2247-2248 |
-LRB- |
denotes |
( |
T9429 |
2248-2251 |
VB |
denotes |
see |
T9430 |
2252-2261 |
JJ |
denotes |
schematic |
T9431 |
2262-2269 |
NN |
denotes |
drawing |
T9432 |
2270-2272 |
IN |
denotes |
of |
T9433 |
2273-2279 |
NN |
denotes |
Figure |
T9434 |
2280-2282 |
NN |
denotes |
1A |
T9435 |
2282-2283 |
-RRB- |
denotes |
) |
T9436 |
2283-2284 |
. |
denotes |
. |
T9437 |
2284-2473 |
sentence |
denotes |
Efficient unwinding into both directions may require simultaneous activation of both hexamers which may sit at the center while extruding the unwound single-stranded DNA through the rings. |
T9438 |
2285-2294 |
JJ |
denotes |
Efficient |
T9439 |
2295-2304 |
NN |
denotes |
unwinding |
T9441 |
2305-2309 |
IN |
denotes |
into |
T9442 |
2310-2314 |
DT |
denotes |
both |
T9443 |
2315-2325 |
NNS |
denotes |
directions |
T9444 |
2326-2329 |
MD |
denotes |
may |
T9440 |
2330-2337 |
VB |
denotes |
require |
T9445 |
2338-2350 |
JJ |
denotes |
simultaneous |
T9446 |
2351-2361 |
NN |
denotes |
activation |
T9447 |
2362-2364 |
IN |
denotes |
of |
T9448 |
2365-2369 |
DT |
denotes |
both |
T9449 |
2370-2378 |
NNS |
denotes |
hexamers |
T9450 |
2379-2384 |
WDT |
denotes |
which |
T9452 |
2385-2388 |
MD |
denotes |
may |
T9451 |
2389-2392 |
VB |
denotes |
sit |
T9453 |
2393-2395 |
IN |
denotes |
at |
T9454 |
2396-2399 |
DT |
denotes |
the |
T9455 |
2400-2406 |
NN |
denotes |
center |
T9456 |
2407-2412 |
IN |
denotes |
while |
T9457 |
2413-2422 |
VBG |
denotes |
extruding |
T9458 |
2423-2426 |
DT |
denotes |
the |
T9460 |
2427-2434 |
JJ |
denotes |
unwound |
T9461 |
2435-2441 |
JJ |
denotes |
single |
T9463 |
2441-2442 |
HYPH |
denotes |
- |
T9462 |
2442-2450 |
VBN |
denotes |
stranded |
T9459 |
2451-2454 |
NN |
denotes |
DNA |
T9464 |
2455-2462 |
IN |
denotes |
through |
T9465 |
2463-2466 |
DT |
denotes |
the |
T9466 |
2467-2472 |
NNS |
denotes |
rings |
T9467 |
2472-2473 |
. |
denotes |
. |
T9468 |
2473-2569 |
sentence |
denotes |
This may closely resemble the proposed modes of binding and helicase actions of T-antigen (21). |
T9469 |
2474-2478 |
DT |
denotes |
This |
T9471 |
2479-2482 |
MD |
denotes |
may |
T9472 |
2483-2490 |
RB |
denotes |
closely |
T9470 |
2491-2499 |
VB |
denotes |
resemble |
T9473 |
2500-2503 |
DT |
denotes |
the |
T9475 |
2504-2512 |
VBN |
denotes |
proposed |
T9474 |
2513-2518 |
NNS |
denotes |
modes |
T9476 |
2519-2521 |
IN |
denotes |
of |
T9477 |
2522-2529 |
NN |
denotes |
binding |
T9479 |
2530-2533 |
CC |
denotes |
and |
T9480 |
2534-2542 |
NN |
denotes |
helicase |
T9478 |
2543-2550 |
NNS |
denotes |
actions |
T9481 |
2551-2553 |
IN |
denotes |
of |
T9482 |
2554-2555 |
NN |
denotes |
T |
T9484 |
2555-2556 |
HYPH |
denotes |
- |
T9483 |
2556-2563 |
NN |
denotes |
antigen |
T9485 |
2564-2565 |
-LRB- |
denotes |
( |
T9486 |
2565-2567 |
CD |
denotes |
21 |
T9487 |
2567-2568 |
-RRB- |
denotes |
) |
T9488 |
2568-2569 |
. |
denotes |
. |
T9489 |
2569-2947 |
sentence |
denotes |
Although we cannot totally exclude the possibility that one Mcm4/6/7 hexamer at each fork unwinds the duplex independently, ring-shaped structures of mouse and archea MCM, as revealed by electron microscopy, bear much similarity to the recently solved structure of the SV40 large T-antigen (4,6), and are in favor of the double-hexameric structure of mouse Mcm on a bubble DNA. |
T9490 |
2570-2578 |
IN |
denotes |
Although |
T9492 |
2579-2581 |
PRP |
denotes |
we |
T9493 |
2582-2585 |
MD |
denotes |
can |
T9494 |
2585-2588 |
RB |
denotes |
not |
T9495 |
2589-2596 |
RB |
denotes |
totally |
T9491 |
2597-2604 |
VB |
denotes |
exclude |
T9497 |
2605-2608 |
DT |
denotes |
the |
T9498 |
2609-2620 |
NN |
denotes |
possibility |
T9499 |
2621-2625 |
IN |
denotes |
that |
T9501 |
2626-2629 |
CD |
denotes |
one |
T9503 |
2630-2634 |
NN |
denotes |
Mcm4 |
T9504 |
2634-2635 |
HYPH |
denotes |
/ |
T9505 |
2635-2636 |
CD |
denotes |
6 |
T9506 |
2636-2637 |
HYPH |
denotes |
/ |
T9507 |
2637-2638 |
CD |
denotes |
7 |
T9502 |
2639-2646 |
NN |
denotes |
hexamer |
T9508 |
2647-2649 |
IN |
denotes |
at |
T9509 |
2650-2654 |
DT |
denotes |
each |
T9510 |
2655-2659 |
NN |
denotes |
fork |
T9500 |
2660-2667 |
VBZ |
denotes |
unwinds |
T9511 |
2668-2671 |
DT |
denotes |
the |
T9512 |
2672-2678 |
NN |
denotes |
duplex |
T9513 |
2679-2692 |
RB |
denotes |
independently |
T9514 |
2692-2694 |
, |
denotes |
, |
T9515 |
2694-2698 |
NN |
denotes |
ring |
T9517 |
2698-2699 |
HYPH |
denotes |
- |
T9516 |
2699-2705 |
VBN |
denotes |
shaped |
T9518 |
2706-2716 |
NNS |
denotes |
structures |
T9519 |
2717-2719 |
IN |
denotes |
of |
T9520 |
2720-2725 |
NN |
denotes |
mouse |
T9522 |
2726-2729 |
CC |
denotes |
and |
T9523 |
2730-2736 |
NN |
denotes |
archea |
T9521 |
2737-2740 |
NN |
denotes |
MCM |
T9524 |
2740-2742 |
, |
denotes |
, |
T9525 |
2742-2744 |
IN |
denotes |
as |
T9526 |
2745-2753 |
VBN |
denotes |
revealed |
T9527 |
2754-2756 |
IN |
denotes |
by |
T9528 |
2757-2765 |
NN |
denotes |
electron |
T9529 |
2766-2776 |
NN |
denotes |
microscopy |
T9530 |
2776-2778 |
, |
denotes |
, |
T9496 |
2778-2782 |
VBP |
denotes |
bear |
T9531 |
2783-2787 |
JJ |
denotes |
much |
T9532 |
2788-2798 |
NN |
denotes |
similarity |
T9533 |
2799-2801 |
IN |
denotes |
to |
T9534 |
2802-2805 |
DT |
denotes |
the |
T9536 |
2806-2814 |
RB |
denotes |
recently |
T9537 |
2815-2821 |
VBN |
denotes |
solved |
T9535 |
2822-2831 |
NN |
denotes |
structure |
T9538 |
2832-2834 |
IN |
denotes |
of |
T9539 |
2835-2838 |
DT |
denotes |
the |
T9541 |
2839-2843 |
NN |
denotes |
SV40 |
T9542 |
2844-2849 |
JJ |
denotes |
large |
T9543 |
2850-2851 |
NN |
denotes |
T |
T9544 |
2851-2852 |
HYPH |
denotes |
- |
T9540 |
2852-2859 |
NN |
denotes |
antigen |
T9545 |
2860-2861 |
-LRB- |
denotes |
( |
T9547 |
2861-2862 |
CD |
denotes |
4 |
T9548 |
2862-2863 |
, |
denotes |
, |
T9546 |
2863-2864 |
CD |
denotes |
6 |
T9549 |
2864-2865 |
-RRB- |
denotes |
) |
T9550 |
2865-2867 |
, |
denotes |
, |
T9551 |
2867-2870 |
CC |
denotes |
and |
T9552 |
2871-2874 |
VBP |
denotes |
are |
T9553 |
2875-2877 |
IN |
denotes |
in |
T9554 |
2878-2883 |
NN |
denotes |
favor |
T9555 |
2884-2886 |
IN |
denotes |
of |
T9556 |
2887-2890 |
DT |
denotes |
the |
T9558 |
2891-2897 |
JJ |
denotes |
double |
T9560 |
2897-2898 |
HYPH |
denotes |
- |
T9559 |
2898-2907 |
JJ |
denotes |
hexameric |
T9557 |
2908-2917 |
NN |
denotes |
structure |
T9561 |
2918-2920 |
IN |
denotes |
of |
T9562 |
2921-2926 |
NN |
denotes |
mouse |
T9563 |
2927-2930 |
NN |
denotes |
Mcm |
T9564 |
2931-2933 |
IN |
denotes |
on |
T9565 |
2934-2935 |
DT |
denotes |
a |
T9567 |
2936-2942 |
NN |
denotes |
bubble |
T9566 |
2943-2946 |
NN |
denotes |
DNA |
T9568 |
2946-2947 |
. |
denotes |
. |
T9856 |
2949-2958 |
NN |
denotes |
Substrate |
T9858 |
2959-2962 |
CC |
denotes |
and |
T9859 |
2963-2971 |
NN |
denotes |
sequence |
T9857 |
2972-2983 |
NN |
denotes |
requirement |
T9860 |
2984-2987 |
IN |
denotes |
for |
T9861 |
2988-2992 |
NN |
denotes |
Mcm4 |
T9863 |
2992-2993 |
HYPH |
denotes |
/ |
T9864 |
2993-2994 |
CD |
denotes |
6 |
T9865 |
2994-2995 |
HYPH |
denotes |
/ |
T9866 |
2995-2996 |
CD |
denotes |
7 |
T9867 |
2997-3005 |
NN |
denotes |
helicase |
T9862 |
3006-3016 |
NN |
denotes |
activation |
T9868 |
3016-3194 |
sentence |
denotes |
DNA binding assays indicate that Mcm4/6/7 binds to those substrates containing single-stranded DNA regions regardless of the presence or absence of single-stranded 3′ or 5′ end. |
T9869 |
3017-3020 |
NN |
denotes |
DNA |
T9870 |
3021-3028 |
NN |
denotes |
binding |
T9871 |
3029-3035 |
NNS |
denotes |
assays |
T9872 |
3036-3044 |
VBP |
denotes |
indicate |
T9873 |
3045-3049 |
IN |
denotes |
that |
T9875 |
3050-3054 |
NN |
denotes |
Mcm4 |
T9876 |
3054-3055 |
HYPH |
denotes |
/ |
T9877 |
3055-3056 |
CD |
denotes |
6 |
T9878 |
3056-3057 |
HYPH |
denotes |
/ |
T9879 |
3057-3058 |
CD |
denotes |
7 |
T9874 |
3059-3064 |
VBZ |
denotes |
binds |
T9880 |
3065-3067 |
IN |
denotes |
to |
T9881 |
3068-3073 |
DT |
denotes |
those |
T9882 |
3074-3084 |
NNS |
denotes |
substrates |
T9883 |
3085-3095 |
VBG |
denotes |
containing |
T9884 |
3096-3102 |
JJ |
denotes |
single |
T9886 |
3102-3103 |
HYPH |
denotes |
- |
T9885 |
3103-3111 |
VBN |
denotes |
stranded |
T9888 |
3112-3115 |
NN |
denotes |
DNA |
T9887 |
3116-3123 |
NNS |
denotes |
regions |
T9889 |
3124-3134 |
RB |
denotes |
regardless |
T9890 |
3135-3137 |
IN |
denotes |
of |
T9891 |
3138-3141 |
DT |
denotes |
the |
T9892 |
3142-3150 |
NN |
denotes |
presence |
T9893 |
3151-3153 |
CC |
denotes |
or |
T9894 |
3154-3161 |
NN |
denotes |
absence |
T9895 |
3162-3164 |
IN |
denotes |
of |
T9896 |
3165-3171 |
JJ |
denotes |
single |
T9898 |
3171-3172 |
HYPH |
denotes |
- |
T9897 |
3172-3180 |
VBN |
denotes |
stranded |
T9900 |
3181-3182 |
CD |
denotes |
3 |
T9901 |
3182-3183 |
SYM |
denotes |
′ |
T9902 |
3184-3186 |
CC |
denotes |
or |
T9903 |
3187-3188 |
CD |
denotes |
5 |
T9904 |
3188-3189 |
SYM |
denotes |
′ |
T9899 |
3190-3193 |
NN |
denotes |
end |
T9905 |
3193-3194 |
. |
denotes |
. |
T9906 |
3194-3295 |
sentence |
denotes |
Unwinding of the duplex DNA depends on translocation of single-stranded DNA from 3′ to 5′ direction. |
T9907 |
3195-3204 |
NN |
denotes |
Unwinding |
T9909 |
3205-3207 |
IN |
denotes |
of |
T9910 |
3208-3211 |
DT |
denotes |
the |
T9912 |
3212-3218 |
NN |
denotes |
duplex |
T9911 |
3219-3222 |
NN |
denotes |
DNA |
T9908 |
3223-3230 |
VBZ |
denotes |
depends |
T9913 |
3231-3233 |
IN |
denotes |
on |
T9914 |
3234-3247 |
NN |
denotes |
translocation |
T9915 |
3248-3250 |
IN |
denotes |
of |
T9916 |
3251-3257 |
JJ |
denotes |
single |
T9918 |
3257-3258 |
HYPH |
denotes |
- |
T9917 |
3258-3266 |
VBN |
denotes |
stranded |
T9919 |
3267-3270 |
NN |
denotes |
DNA |
T9920 |
3271-3275 |
IN |
denotes |
from |
T9921 |
3276-3277 |
CD |
denotes |
3 |
T9922 |
3277-3278 |
SYM |
denotes |
′ |
T9923 |
3279-3281 |
IN |
denotes |
to |
T9924 |
3282-3283 |
CD |
denotes |
5 |
T9925 |
3283-3284 |
SYM |
denotes |
′ |
T9926 |
3285-3294 |
NN |
denotes |
direction |
T9927 |
3294-3295 |
. |
denotes |
. |
T9928 |
3295-3431 |
sentence |
denotes |
This is most clearly shown by its helicase action on A-fork[5′] and 3′-extension but not on A-fork[3′], A-fork[3′,5′] nor 5′-extension. |
T9929 |
3296-3300 |
DT |
denotes |
This |
T9931 |
3301-3303 |
VBZ |
denotes |
is |
T9932 |
3304-3308 |
RBS |
denotes |
most |
T9933 |
3309-3316 |
RB |
denotes |
clearly |
T9930 |
3317-3322 |
VBN |
denotes |
shown |
T9934 |
3323-3325 |
IN |
denotes |
by |
T9935 |
3326-3329 |
PRP$ |
denotes |
its |
T9937 |
3330-3338 |
NN |
denotes |
helicase |
T9936 |
3339-3345 |
NN |
denotes |
action |
T9938 |
3346-3348 |
IN |
denotes |
on |
T9939 |
3349-3350 |
NN |
denotes |
A |
T9941 |
3350-3351 |
HYPH |
denotes |
- |
T9940 |
3351-3355 |
NN |
denotes |
fork |
T9943 |
3355-3356 |
-LRB- |
denotes |
[ |
T9944 |
3356-3357 |
CD |
denotes |
5 |
T9945 |
3357-3358 |
SYM |
denotes |
′ |
T9946 |
3358-3359 |
-RRB- |
denotes |
] |
T9947 |
3360-3363 |
CC |
denotes |
and |
T9948 |
3364-3365 |
CD |
denotes |
3 |
T9949 |
3365-3366 |
SYM |
denotes |
′ |
T9950 |
3366-3367 |
HYPH |
denotes |
- |
T9942 |
3367-3376 |
NN |
denotes |
extension |
T9951 |
3377-3380 |
CC |
denotes |
but |
T9952 |
3381-3384 |
RB |
denotes |
not |
T9953 |
3385-3387 |
IN |
denotes |
on |
T9954 |
3388-3389 |
NN |
denotes |
A |
T9956 |
3389-3390 |
HYPH |
denotes |
- |
T9955 |
3390-3394 |
NN |
denotes |
fork |
T9958 |
3394-3395 |
-LRB- |
denotes |
[ |
T9959 |
3395-3396 |
CD |
denotes |
3 |
T9960 |
3396-3397 |
SYM |
denotes |
′ |
T9961 |
3397-3398 |
-RRB- |
denotes |
] |
T9962 |
3398-3400 |
, |
denotes |
, |
T9963 |
3400-3401 |
NN |
denotes |
A |
T9965 |
3401-3402 |
HYPH |
denotes |
- |
T9964 |
3402-3406 |
NN |
denotes |
fork |
T9966 |
3406-3407 |
-LRB- |
denotes |
[ |
T9967 |
3407-3408 |
CD |
denotes |
3 |
T9968 |
3408-3409 |
SYM |
denotes |
′ |
T9969 |
3409-3410 |
, |
denotes |
, |
T9970 |
3410-3411 |
CD |
denotes |
5 |
T9971 |
3411-3412 |
SYM |
denotes |
′ |
T9972 |
3412-3413 |
-RRB- |
denotes |
] |
T9973 |
3414-3417 |
CC |
denotes |
nor |
T9974 |
3418-3419 |
CD |
denotes |
5 |
T9975 |
3419-3420 |
SYM |
denotes |
′ |
T9976 |
3420-3421 |
HYPH |
denotes |
- |
T9957 |
3421-3430 |
NN |
denotes |
extension |
T9977 |
3430-3431 |
. |
denotes |
. |
T9978 |
3431-3592 |
sentence |
denotes |
However, it does not necessarily require 3′ end of single-stranded DNA, since Mcm4/6/7 can displace annealing oligonucleotide on a circular single-stranded DNA. |
T9979 |
3432-3439 |
RB |
denotes |
However |
T9981 |
3439-3441 |
, |
denotes |
, |
T9982 |
3441-3443 |
PRP |
denotes |
it |
T9983 |
3444-3448 |
VBZ |
denotes |
does |
T9984 |
3449-3452 |
RB |
denotes |
not |
T9985 |
3453-3464 |
RB |
denotes |
necessarily |
T9980 |
3465-3472 |
VB |
denotes |
require |
T9986 |
3473-3474 |
CD |
denotes |
3 |
T9988 |
3474-3475 |
SYM |
denotes |
′ |
T9987 |
3476-3479 |
NN |
denotes |
end |
T9989 |
3480-3482 |
IN |
denotes |
of |
T9990 |
3483-3489 |
JJ |
denotes |
single |
T9992 |
3489-3490 |
HYPH |
denotes |
- |
T9991 |
3490-3498 |
VBN |
denotes |
stranded |
T9993 |
3499-3502 |
NN |
denotes |
DNA |
T9994 |
3502-3504 |
, |
denotes |
, |
T9995 |
3504-3509 |
IN |
denotes |
since |
T9997 |
3510-3514 |
NN |
denotes |
Mcm4 |
T9998 |
3514-3515 |
HYPH |
denotes |
/ |
T9999 |
3515-3516 |
CD |
denotes |
6 |
T10000 |
3516-3517 |
HYPH |
denotes |
/ |
T10001 |
3517-3518 |
CD |
denotes |
7 |
T10002 |
3519-3522 |
MD |
denotes |
can |
T9996 |
3523-3531 |
VB |
denotes |
displace |
T10003 |
3532-3541 |
VBG |
denotes |
annealing |
T10004 |
3542-3557 |
NN |
denotes |
oligonucleotide |
T10005 |
3558-3560 |
IN |
denotes |
on |
T10006 |
3561-3562 |
DT |
denotes |
a |
T10008 |
3563-3571 |
JJ |
denotes |
circular |
T10009 |
3572-3578 |
JJ |
denotes |
single |
T10011 |
3578-3579 |
HYPH |
denotes |
- |
T10010 |
3579-3587 |
VBN |
denotes |
stranded |
T10007 |
3588-3591 |
NN |
denotes |
DNA |
T10012 |
3591-3592 |
. |
denotes |
. |
T10013 |
3592-3750 |
sentence |
denotes |
The ability of the mouse Mcm4/6/7 to unwind 3′-extension is shared by the archaeal Mcm helicase but not by Mcm4/6/7 from S.pombe and S.cerevisiae (14,26,27). |
T10014 |
3593-3596 |
DT |
denotes |
The |
T10015 |
3597-3604 |
NN |
denotes |
ability |
T10017 |
3605-3607 |
IN |
denotes |
of |
T10018 |
3608-3611 |
DT |
denotes |
the |
T10020 |
3612-3617 |
NN |
denotes |
mouse |
T10019 |
3618-3622 |
NN |
denotes |
Mcm4 |
T10021 |
3622-3623 |
HYPH |
denotes |
/ |
T10022 |
3623-3624 |
CD |
denotes |
6 |
T10023 |
3624-3625 |
HYPH |
denotes |
/ |
T10024 |
3625-3626 |
CD |
denotes |
7 |
T10025 |
3627-3629 |
TO |
denotes |
to |
T10026 |
3630-3636 |
VB |
denotes |
unwind |
T10027 |
3637-3638 |
CD |
denotes |
3 |
T10029 |
3638-3639 |
SYM |
denotes |
′ |
T10030 |
3639-3640 |
HYPH |
denotes |
- |
T10028 |
3640-3649 |
NN |
denotes |
extension |
T10031 |
3650-3652 |
VBZ |
denotes |
is |
T10016 |
3653-3659 |
VBN |
denotes |
shared |
T10032 |
3660-3662 |
IN |
denotes |
by |
T10033 |
3663-3666 |
DT |
denotes |
the |
T10035 |
3667-3675 |
JJ |
denotes |
archaeal |
T10036 |
3676-3679 |
NN |
denotes |
Mcm |
T10034 |
3680-3688 |
NN |
denotes |
helicase |
T10037 |
3689-3692 |
CC |
denotes |
but |
T10038 |
3693-3696 |
RB |
denotes |
not |
T10039 |
3697-3699 |
IN |
denotes |
by |
T10040 |
3700-3704 |
NN |
denotes |
Mcm4 |
T10041 |
3704-3705 |
HYPH |
denotes |
/ |
T10042 |
3705-3706 |
CD |
denotes |
6 |
T10043 |
3706-3707 |
HYPH |
denotes |
/ |
T10044 |
3707-3708 |
CD |
denotes |
7 |
T10045 |
3709-3713 |
IN |
denotes |
from |
T10046 |
3714-3721 |
NNP |
denotes |
S.pombe |
T10047 |
3722-3725 |
CC |
denotes |
and |
T10048 |
3726-3738 |
NNP |
denotes |
S.cerevisiae |
T10049 |
3739-3740 |
-LRB- |
denotes |
( |
T10051 |
3740-3742 |
CD |
denotes |
14 |
T10052 |
3742-3743 |
, |
denotes |
, |
T10053 |
3743-3745 |
CD |
denotes |
26 |
T10054 |
3745-3746 |
, |
denotes |
, |
T10050 |
3746-3748 |
CD |
denotes |
27 |
T10055 |
3748-3749 |
-RRB- |
denotes |
) |
T10056 |
3749-3750 |
. |
denotes |
. |
T10057 |
3750-3899 |
sentence |
denotes |
The archaeal Mcm can unwind A-fork[3′] but eukaryotic Mcm4/6/7 cannot, since the former binds to double-stranded DNA but the latter does not (5,27). |
T10058 |
3751-3754 |
DT |
denotes |
The |
T10060 |
3755-3763 |
JJ |
denotes |
archaeal |
T10059 |
3764-3767 |
NN |
denotes |
Mcm |
T10062 |
3768-3771 |
MD |
denotes |
can |
T10061 |
3772-3778 |
VB |
denotes |
unwind |
T10063 |
3779-3780 |
NN |
denotes |
A |
T10065 |
3780-3781 |
HYPH |
denotes |
- |
T10064 |
3781-3785 |
NN |
denotes |
fork |
T10066 |
3785-3786 |
-LRB- |
denotes |
[ |
T10067 |
3786-3787 |
CD |
denotes |
3 |
T10068 |
3787-3788 |
SYM |
denotes |
′ |
T10069 |
3788-3789 |
-RRB- |
denotes |
] |
T10070 |
3790-3793 |
CC |
denotes |
but |
T10071 |
3794-3804 |
JJ |
denotes |
eukaryotic |
T10072 |
3805-3809 |
NN |
denotes |
Mcm4 |
T10074 |
3809-3810 |
HYPH |
denotes |
/ |
T10075 |
3810-3811 |
CD |
denotes |
6 |
T10076 |
3811-3812 |
HYPH |
denotes |
/ |
T10077 |
3812-3813 |
CD |
denotes |
7 |
T10073 |
3814-3817 |
MD |
denotes |
can |
T10078 |
3817-3820 |
RB |
denotes |
not |
T10079 |
3820-3822 |
, |
denotes |
, |
T10080 |
3822-3827 |
IN |
denotes |
since |
T10082 |
3828-3831 |
DT |
denotes |
the |
T10083 |
3832-3838 |
NN |
denotes |
former |
T10081 |
3839-3844 |
VBZ |
denotes |
binds |
T10084 |
3845-3847 |
IN |
denotes |
to |
T10085 |
3848-3854 |
JJ |
denotes |
double |
T10087 |
3854-3855 |
HYPH |
denotes |
- |
T10086 |
3855-3863 |
VBN |
denotes |
stranded |
T10088 |
3864-3867 |
NN |
denotes |
DNA |
T10089 |
3868-3871 |
CC |
denotes |
but |
T10090 |
3872-3875 |
DT |
denotes |
the |
T10091 |
3876-3882 |
JJ |
denotes |
latter |
T10093 |
3883-3887 |
VBZ |
denotes |
does |
T10094 |
3888-3891 |
RB |
denotes |
not |
T10095 |
3892-3893 |
-LRB- |
denotes |
( |
T10096 |
3893-3894 |
CD |
denotes |
5 |
T10097 |
3894-3895 |
, |
denotes |
, |
T10092 |
3895-3897 |
CD |
denotes |
27 |
T10098 |
3897-3898 |
-RRB- |
denotes |
) |
T10099 |
3898-3899 |
. |
denotes |
. |
T10100 |
3899-4029 |
sentence |
denotes |
While yeast Mcm helicases can translocate on duplex DNA, such activity was not observed with mammalian Mcm4/6/7 (data not shown). |
T10101 |
3900-3905 |
IN |
denotes |
While |
T10103 |
3906-3911 |
NN |
denotes |
yeast |
T10104 |
3912-3915 |
NN |
denotes |
Mcm |
T10105 |
3916-3925 |
NNS |
denotes |
helicases |
T10106 |
3926-3929 |
MD |
denotes |
can |
T10102 |
3930-3941 |
VB |
denotes |
translocate |
T10108 |
3942-3944 |
IN |
denotes |
on |
T10109 |
3945-3951 |
NN |
denotes |
duplex |
T10110 |
3952-3955 |
NN |
denotes |
DNA |
T10111 |
3955-3957 |
, |
denotes |
, |
T10112 |
3957-3961 |
JJ |
denotes |
such |
T10113 |
3962-3970 |
NN |
denotes |
activity |
T10114 |
3971-3974 |
VBD |
denotes |
was |
T10115 |
3975-3978 |
RB |
denotes |
not |
T10107 |
3979-3987 |
VBN |
denotes |
observed |
T10116 |
3988-3992 |
IN |
denotes |
with |
T10117 |
3993-4002 |
JJ |
denotes |
mammalian |
T10118 |
4003-4007 |
NN |
denotes |
Mcm4 |
T10119 |
4007-4008 |
HYPH |
denotes |
/ |
T10120 |
4008-4009 |
CD |
denotes |
6 |
T10121 |
4009-4010 |
HYPH |
denotes |
/ |
T10122 |
4010-4011 |
CD |
denotes |
7 |
T10123 |
4012-4013 |
-LRB- |
denotes |
( |
T10125 |
4013-4017 |
NNS |
denotes |
data |
T10126 |
4018-4021 |
RB |
denotes |
not |
T10124 |
4022-4027 |
VBN |
denotes |
shown |
T10127 |
4027-4028 |
-RRB- |
denotes |
) |
T10128 |
4028-4029 |
. |
denotes |
. |
T10129 |
4029-4366 |
sentence |
denotes |
Occurrence of AT-rich sequences, with asymmetric distribution of adenine and thymine, near the replication origins, lead us to propose that Mcm may play a role in selection of initiation sites of mammalian DNA replication, and prompted us to examine the ability of sequences from human replication origins to activate Mcm4/6/7 helicase. |
T10130 |
4030-4040 |
NN |
denotes |
Occurrence |
T10132 |
4041-4043 |
IN |
denotes |
of |
T10133 |
4044-4046 |
NN |
denotes |
AT |
T10135 |
4046-4047 |
HYPH |
denotes |
- |
T10134 |
4047-4051 |
JJ |
denotes |
rich |
T10136 |
4052-4061 |
NNS |
denotes |
sequences |
T10137 |
4061-4063 |
, |
denotes |
, |
T10138 |
4063-4067 |
IN |
denotes |
with |
T10139 |
4068-4078 |
JJ |
denotes |
asymmetric |
T10140 |
4079-4091 |
NN |
denotes |
distribution |
T10141 |
4092-4094 |
IN |
denotes |
of |
T10142 |
4095-4102 |
NN |
denotes |
adenine |
T10143 |
4103-4106 |
CC |
denotes |
and |
T10144 |
4107-4114 |
NN |
denotes |
thymine |
T10145 |
4114-4116 |
, |
denotes |
, |
T10146 |
4116-4120 |
IN |
denotes |
near |
T10147 |
4121-4124 |
DT |
denotes |
the |
T10149 |
4125-4136 |
NN |
denotes |
replication |
T10148 |
4137-4144 |
NNS |
denotes |
origins |
T10150 |
4144-4146 |
, |
denotes |
, |
T10131 |
4146-4150 |
VBP |
denotes |
lead |
T10151 |
4151-4153 |
PRP |
denotes |
us |
T10152 |
4154-4156 |
TO |
denotes |
to |
T10153 |
4157-4164 |
VB |
denotes |
propose |
T10154 |
4165-4169 |
IN |
denotes |
that |
T10156 |
4170-4173 |
NNP |
denotes |
Mcm |
T10157 |
4174-4177 |
MD |
denotes |
may |
T10155 |
4178-4182 |
VB |
denotes |
play |
T10158 |
4183-4184 |
DT |
denotes |
a |
T10159 |
4185-4189 |
NN |
denotes |
role |
T10160 |
4190-4192 |
IN |
denotes |
in |
T10161 |
4193-4202 |
NN |
denotes |
selection |
T10162 |
4203-4205 |
IN |
denotes |
of |
T10163 |
4206-4216 |
NN |
denotes |
initiation |
T10164 |
4217-4222 |
NNS |
denotes |
sites |
T10165 |
4223-4225 |
IN |
denotes |
of |
T10166 |
4226-4235 |
JJ |
denotes |
mammalian |
T10167 |
4236-4239 |
NN |
denotes |
DNA |
T10168 |
4240-4251 |
NN |
denotes |
replication |
T10169 |
4251-4253 |
, |
denotes |
, |
T10170 |
4253-4256 |
CC |
denotes |
and |
T10171 |
4257-4265 |
VBD |
denotes |
prompted |
T10172 |
4266-4268 |
PRP |
denotes |
us |
T10173 |
4269-4271 |
TO |
denotes |
to |
T10174 |
4272-4279 |
VB |
denotes |
examine |
T10175 |
4280-4283 |
DT |
denotes |
the |
T10176 |
4284-4291 |
NN |
denotes |
ability |
T10177 |
4292-4294 |
IN |
denotes |
of |
T10178 |
4295-4304 |
NNS |
denotes |
sequences |
T10179 |
4305-4309 |
IN |
denotes |
from |
T10180 |
4310-4315 |
JJ |
denotes |
human |
T10182 |
4316-4327 |
NN |
denotes |
replication |
T10181 |
4328-4335 |
NNS |
denotes |
origins |
T10183 |
4336-4338 |
TO |
denotes |
to |
T10184 |
4339-4347 |
VB |
denotes |
activate |
T10185 |
4348-4352 |
NN |
denotes |
Mcm4 |
T10187 |
4352-4353 |
HYPH |
denotes |
/ |
T10188 |
4353-4354 |
CD |
denotes |
6 |
T10189 |
4354-4355 |
HYPH |
denotes |
/ |
T10190 |
4355-4356 |
CD |
denotes |
7 |
T10186 |
4357-4365 |
NN |
denotes |
helicase |
T10191 |
4365-4366 |
. |
denotes |
. |
T10192 |
4366-4455 |
sentence |
denotes |
Both lamin-B2 and c-myc origins served as efficient activator for Mcm helicase in vitro. |
T10193 |
4367-4371 |
CC |
denotes |
Both |
T10195 |
4372-4377 |
NN |
denotes |
lamin |
T10196 |
4377-4378 |
HYPH |
denotes |
- |
T10194 |
4378-4380 |
NN |
denotes |
B2 |
T10198 |
4381-4384 |
CC |
denotes |
and |
T10199 |
4385-4386 |
NN |
denotes |
c |
T10201 |
4386-4387 |
HYPH |
denotes |
- |
T10200 |
4387-4390 |
NN |
denotes |
myc |
T10197 |
4391-4398 |
NNS |
denotes |
origins |
T10202 |
4399-4405 |
VBD |
denotes |
served |
T10203 |
4406-4408 |
IN |
denotes |
as |
T10204 |
4409-4418 |
JJ |
denotes |
efficient |
T10205 |
4419-4428 |
NN |
denotes |
activator |
T10206 |
4429-4432 |
IN |
denotes |
for |
T10207 |
4433-4436 |
NN |
denotes |
Mcm |
T10208 |
4437-4445 |
NN |
denotes |
helicase |
T10209 |
4446-4448 |
FW |
denotes |
in |
T10210 |
4449-4454 |
FW |
denotes |
vitro |
T10211 |
4454-4455 |
. |
denotes |
. |
T10212 |
4455-4584 |
sentence |
denotes |
Consistent with it, site-specific loading of Mcm in the DNA replication initiation zone of the c-myc was recently reported (33). |
T10213 |
4456-4466 |
JJ |
denotes |
Consistent |
T10215 |
4467-4471 |
IN |
denotes |
with |
T10216 |
4472-4474 |
PRP |
denotes |
it |
T10217 |
4474-4476 |
, |
denotes |
, |
T10218 |
4476-4480 |
NN |
denotes |
site |
T10220 |
4480-4481 |
HYPH |
denotes |
- |
T10219 |
4481-4489 |
JJ |
denotes |
specific |
T10221 |
4490-4497 |
NN |
denotes |
loading |
T10222 |
4498-4500 |
IN |
denotes |
of |
T10223 |
4501-4504 |
NN |
denotes |
Mcm |
T10224 |
4505-4507 |
IN |
denotes |
in |
T10225 |
4508-4511 |
DT |
denotes |
the |
T10227 |
4512-4515 |
NN |
denotes |
DNA |
T10229 |
4516-4527 |
NN |
denotes |
replication |
T10228 |
4528-4538 |
NN |
denotes |
initiation |
T10226 |
4539-4543 |
NN |
denotes |
zone |
T10230 |
4544-4546 |
IN |
denotes |
of |
T10231 |
4547-4550 |
DT |
denotes |
the |
T10233 |
4551-4552 |
NN |
denotes |
c |
T10234 |
4552-4553 |
HYPH |
denotes |
- |
T10232 |
4553-4556 |
NN |
denotes |
myc |
T10235 |
4557-4560 |
VBD |
denotes |
was |
T10236 |
4561-4569 |
RB |
denotes |
recently |
T10214 |
4570-4578 |
VBN |
denotes |
reported |
T10237 |
4579-4580 |
-LRB- |
denotes |
( |
T10238 |
4580-4582 |
CD |
denotes |
33 |
T10239 |
4582-4583 |
-RRB- |
denotes |
) |
T10240 |
4583-4584 |
. |
denotes |
. |
T10241 |
4584-4702 |
sentence |
denotes |
We have examined in detail the effect of sequence context of the single-stranded DNA on the helicase activity of Mcm. |
T10242 |
4585-4587 |
PRP |
denotes |
We |
T10244 |
4588-4592 |
VBP |
denotes |
have |
T10243 |
4593-4601 |
VBN |
denotes |
examined |
T10245 |
4602-4604 |
IN |
denotes |
in |
T10246 |
4605-4611 |
NN |
denotes |
detail |
T10247 |
4612-4615 |
DT |
denotes |
the |
T10248 |
4616-4622 |
NN |
denotes |
effect |
T10249 |
4623-4625 |
IN |
denotes |
of |
T10250 |
4626-4634 |
NN |
denotes |
sequence |
T10251 |
4635-4642 |
NN |
denotes |
context |
T10252 |
4643-4645 |
IN |
denotes |
of |
T10253 |
4646-4649 |
DT |
denotes |
the |
T10255 |
4650-4656 |
JJ |
denotes |
single |
T10257 |
4656-4657 |
HYPH |
denotes |
- |
T10256 |
4657-4665 |
VBN |
denotes |
stranded |
T10254 |
4666-4669 |
NN |
denotes |
DNA |
T10258 |
4670-4672 |
IN |
denotes |
on |
T10259 |
4673-4676 |
DT |
denotes |
the |
T10261 |
4677-4685 |
NN |
denotes |
helicase |
T10260 |
4686-4694 |
NN |
denotes |
activity |
T10262 |
4695-4697 |
IN |
denotes |
of |
T10263 |
4698-4701 |
NN |
denotes |
Mcm |
T10264 |
4701-4702 |
. |
denotes |
. |
T10265 |
4702-4800 |
sentence |
denotes |
The results indicate that thymine content of 50% is sufficient for the maximum helicase activity. |
T10266 |
4703-4706 |
DT |
denotes |
The |
T10267 |
4707-4714 |
NNS |
denotes |
results |
T10268 |
4715-4723 |
VBP |
denotes |
indicate |
T10269 |
4724-4728 |
IN |
denotes |
that |
T10271 |
4729-4736 |
NN |
denotes |
thymine |
T10272 |
4737-4744 |
NN |
denotes |
content |
T10273 |
4745-4747 |
IN |
denotes |
of |
T10274 |
4748-4750 |
CD |
denotes |
50 |
T10275 |
4750-4751 |
NN |
denotes |
% |
T10270 |
4752-4754 |
VBZ |
denotes |
is |
T10276 |
4755-4765 |
JJ |
denotes |
sufficient |
T10277 |
4766-4769 |
IN |
denotes |
for |
T10278 |
4770-4773 |
DT |
denotes |
the |
T10280 |
4774-4781 |
JJ |
denotes |
maximum |
T10281 |
4782-4790 |
NN |
denotes |
helicase |
T10279 |
4791-4799 |
NN |
denotes |
activity |
T10282 |
4799-4800 |
. |
denotes |
. |
T10283 |
4800-4906 |
sentence |
denotes |
The efficiency of displacement decreased as the thymine content of the 3′-tail dropped to 33% (Figure 6). |
T10284 |
4801-4804 |
DT |
denotes |
The |
T10285 |
4805-4815 |
NN |
denotes |
efficiency |
T10287 |
4816-4818 |
IN |
denotes |
of |
T10288 |
4819-4831 |
NN |
denotes |
displacement |
T10286 |
4832-4841 |
VBD |
denotes |
decreased |
T10289 |
4842-4844 |
IN |
denotes |
as |
T10291 |
4845-4848 |
DT |
denotes |
the |
T10293 |
4849-4856 |
NN |
denotes |
thymine |
T10292 |
4857-4864 |
NN |
denotes |
content |
T10294 |
4865-4867 |
IN |
denotes |
of |
T10295 |
4868-4871 |
DT |
denotes |
the |
T10297 |
4872-4873 |
CD |
denotes |
3 |
T10298 |
4873-4874 |
SYM |
denotes |
′ |
T10299 |
4874-4875 |
HYPH |
denotes |
- |
T10296 |
4875-4879 |
NN |
denotes |
tail |
T10290 |
4880-4887 |
VBD |
denotes |
dropped |
T10300 |
4888-4890 |
IN |
denotes |
to |
T10301 |
4891-4893 |
CD |
denotes |
33 |
T10302 |
4893-4894 |
NN |
denotes |
% |
T10303 |
4895-4896 |
-LRB- |
denotes |
( |
T10304 |
4896-4902 |
NN |
denotes |
Figure |
T10305 |
4903-4904 |
CD |
denotes |
6 |
T10306 |
4904-4905 |
-RRB- |
denotes |
) |
T10307 |
4905-4906 |
. |
denotes |
. |
T10308 |
4906-5050 |
sentence |
denotes |
The stretches of thymine residues may not be necessarily required, since repeats of TC dinucleotides served as a potent activator for Mcm4/6/7. |
T10309 |
4907-4910 |
DT |
denotes |
The |
T10310 |
4911-4920 |
NNS |
denotes |
stretches |
T10312 |
4921-4923 |
IN |
denotes |
of |
T10313 |
4924-4931 |
NN |
denotes |
thymine |
T10314 |
4932-4940 |
NNS |
denotes |
residues |
T10315 |
4941-4944 |
MD |
denotes |
may |
T10316 |
4945-4948 |
RB |
denotes |
not |
T10317 |
4949-4951 |
VB |
denotes |
be |
T10318 |
4952-4963 |
RB |
denotes |
necessarily |
T10311 |
4964-4972 |
VBN |
denotes |
required |
T10319 |
4972-4974 |
, |
denotes |
, |
T10320 |
4974-4979 |
IN |
denotes |
since |
T10322 |
4980-4987 |
NNS |
denotes |
repeats |
T10323 |
4988-4990 |
IN |
denotes |
of |
T10324 |
4991-4993 |
NN |
denotes |
TC |
T10325 |
4994-5007 |
NNS |
denotes |
dinucleotides |
T10321 |
5008-5014 |
VBD |
denotes |
served |
T10326 |
5015-5017 |
IN |
denotes |
as |
T10327 |
5018-5019 |
DT |
denotes |
a |
T10329 |
5020-5026 |
JJ |
denotes |
potent |
T10328 |
5027-5036 |
NN |
denotes |
activator |
T10330 |
5037-5040 |
IN |
denotes |
for |
T10331 |
5041-5045 |
NN |
denotes |
Mcm4 |
T10332 |
5045-5046 |
HYPH |
denotes |
/ |
T10333 |
5046-5047 |
CD |
denotes |
6 |
T10334 |
5047-5048 |
HYPH |
denotes |
/ |
T10335 |
5048-5049 |
CD |
denotes |
7 |
T10336 |
5049-5050 |
. |
denotes |
. |
T10337 |
5050-5175 |
sentence |
denotes |
We also noticed that the presence of a secondary structure within the single-stranded DNA is inhibitory for helicase action. |
T10338 |
5051-5053 |
PRP |
denotes |
We |
T10340 |
5054-5058 |
RB |
denotes |
also |
T10339 |
5059-5066 |
VBD |
denotes |
noticed |
T10341 |
5067-5071 |
IN |
denotes |
that |
T10343 |
5072-5075 |
DT |
denotes |
the |
T10344 |
5076-5084 |
NN |
denotes |
presence |
T10345 |
5085-5087 |
IN |
denotes |
of |
T10346 |
5088-5089 |
DT |
denotes |
a |
T10348 |
5090-5099 |
JJ |
denotes |
secondary |
T10347 |
5100-5109 |
NN |
denotes |
structure |
T10349 |
5110-5116 |
IN |
denotes |
within |
T10350 |
5117-5120 |
DT |
denotes |
the |
T10352 |
5121-5127 |
JJ |
denotes |
single |
T10354 |
5127-5128 |
HYPH |
denotes |
- |
T10353 |
5128-5136 |
VBN |
denotes |
stranded |
T10351 |
5137-5140 |
NN |
denotes |
DNA |
T10342 |
5141-5143 |
VBZ |
denotes |
is |
T10355 |
5144-5154 |
JJ |
denotes |
inhibitory |
T10356 |
5155-5158 |
IN |
denotes |
for |
T10357 |
5159-5167 |
NN |
denotes |
helicase |
T10358 |
5168-5174 |
NN |
denotes |
action |
T10359 |
5174-5175 |
. |
denotes |
. |
T10360 |
5175-5287 |
sentence |
denotes |
Nuclease footprinting assays indicated that binding was interfered by the secondary structure (data not shown). |
T10361 |
5176-5184 |
NN |
denotes |
Nuclease |
T10362 |
5185-5197 |
NN |
denotes |
footprinting |
T10363 |
5198-5204 |
NNS |
denotes |
assays |
T10364 |
5205-5214 |
VBD |
denotes |
indicated |
T10365 |
5215-5219 |
IN |
denotes |
that |
T10367 |
5220-5227 |
NN |
denotes |
binding |
T10368 |
5228-5231 |
VBD |
denotes |
was |
T10366 |
5232-5242 |
VBN |
denotes |
interfered |
T10369 |
5243-5245 |
IN |
denotes |
by |
T10370 |
5246-5249 |
DT |
denotes |
the |
T10372 |
5250-5259 |
JJ |
denotes |
secondary |
T10371 |
5260-5269 |
NN |
denotes |
structure |
T10373 |
5270-5271 |
-LRB- |
denotes |
( |
T10375 |
5271-5275 |
NNS |
denotes |
data |
T10376 |
5276-5279 |
RB |
denotes |
not |
T10374 |
5280-5285 |
VBN |
denotes |
shown |
T10377 |
5285-5286 |
-RRB- |
denotes |
) |
T10378 |
5286-5287 |
. |
denotes |
. |
T10379 |
5287-5695 |
sentence |
denotes |
Thus, we have concluded that Mcm4/6/7 helicase is most efficiently activated by non-structured single-stranded DNA with thymine content of 50% or more, although significant stimulation is observed also by DNA with less thymine content (Figure 7), suggesting that the sequence specificity for Mcm helicase activation is rather relaxed and that the extent of the activation may depend on the sequence context. |
T10380 |
5288-5292 |
RB |
denotes |
Thus |
T10382 |
5292-5294 |
, |
denotes |
, |
T10383 |
5294-5296 |
PRP |
denotes |
we |
T10384 |
5297-5301 |
VBP |
denotes |
have |
T10381 |
5302-5311 |
VBN |
denotes |
concluded |
T10385 |
5312-5316 |
IN |
denotes |
that |
T10387 |
5317-5321 |
NN |
denotes |
Mcm4 |
T10389 |
5321-5322 |
HYPH |
denotes |
/ |
T10390 |
5322-5323 |
CD |
denotes |
6 |
T10391 |
5323-5324 |
HYPH |
denotes |
/ |
T10392 |
5324-5325 |
CD |
denotes |
7 |
T10388 |
5326-5334 |
NN |
denotes |
helicase |
T10393 |
5335-5337 |
VBZ |
denotes |
is |
T10394 |
5338-5342 |
RBS |
denotes |
most |
T10395 |
5343-5354 |
RB |
denotes |
efficiently |
T10386 |
5355-5364 |
VBN |
denotes |
activated |
T10396 |
5365-5367 |
IN |
denotes |
by |
T10397 |
5368-5382 |
JJ |
denotes |
non-structured |
T10399 |
5383-5389 |
JJ |
denotes |
single |
T10401 |
5389-5390 |
HYPH |
denotes |
- |
T10400 |
5390-5398 |
VBN |
denotes |
stranded |
T10398 |
5399-5402 |
NN |
denotes |
DNA |
T10402 |
5403-5407 |
IN |
denotes |
with |
T10403 |
5408-5415 |
NN |
denotes |
thymine |
T10404 |
5416-5423 |
NN |
denotes |
content |
T10405 |
5424-5426 |
IN |
denotes |
of |
T10406 |
5427-5429 |
CD |
denotes |
50 |
T10407 |
5429-5430 |
NN |
denotes |
% |
T10408 |
5431-5433 |
CC |
denotes |
or |
T10409 |
5434-5438 |
JJR |
denotes |
more |
T10410 |
5438-5440 |
, |
denotes |
, |
T10411 |
5440-5448 |
IN |
denotes |
although |
T10413 |
5449-5460 |
JJ |
denotes |
significant |
T10414 |
5461-5472 |
NN |
denotes |
stimulation |
T10415 |
5473-5475 |
VBZ |
denotes |
is |
T10412 |
5476-5484 |
VBN |
denotes |
observed |
T10416 |
5485-5489 |
RB |
denotes |
also |
T10417 |
5490-5492 |
IN |
denotes |
by |
T10418 |
5493-5496 |
NN |
denotes |
DNA |
T10419 |
5497-5501 |
IN |
denotes |
with |
T10420 |
5502-5506 |
JJR |
denotes |
less |
T10422 |
5507-5514 |
NN |
denotes |
thymine |
T10421 |
5515-5522 |
NN |
denotes |
content |
T10423 |
5523-5524 |
-LRB- |
denotes |
( |
T10424 |
5524-5530 |
NN |
denotes |
Figure |
T10425 |
5531-5532 |
CD |
denotes |
7 |
T10426 |
5532-5533 |
-RRB- |
denotes |
) |
T10427 |
5533-5535 |
, |
denotes |
, |
T10428 |
5535-5545 |
VBG |
denotes |
suggesting |
T10429 |
5546-5550 |
IN |
denotes |
that |
T10431 |
5551-5554 |
DT |
denotes |
the |
T10433 |
5555-5563 |
NN |
denotes |
sequence |
T10432 |
5564-5575 |
NN |
denotes |
specificity |
T10434 |
5576-5579 |
IN |
denotes |
for |
T10435 |
5580-5583 |
NN |
denotes |
Mcm |
T10436 |
5584-5592 |
NN |
denotes |
helicase |
T10437 |
5593-5603 |
NN |
denotes |
activation |
T10430 |
5604-5606 |
VBZ |
denotes |
is |
T10438 |
5607-5613 |
RB |
denotes |
rather |
T10439 |
5614-5621 |
JJ |
denotes |
relaxed |
T10440 |
5622-5625 |
CC |
denotes |
and |
T10441 |
5626-5630 |
IN |
denotes |
that |
T10443 |
5631-5634 |
DT |
denotes |
the |
T10444 |
5635-5641 |
NN |
denotes |
extent |
T10445 |
5642-5644 |
IN |
denotes |
of |
T10446 |
5645-5648 |
DT |
denotes |
the |
T10447 |
5649-5659 |
NN |
denotes |
activation |
T10448 |
5660-5663 |
MD |
denotes |
may |
T10442 |
5664-5670 |
VB |
denotes |
depend |
T10449 |
5671-5673 |
IN |
denotes |
on |
T10450 |
5674-5677 |
DT |
denotes |
the |
T10452 |
5678-5686 |
NN |
denotes |
sequence |
T10451 |
5687-5694 |
NN |
denotes |
context |
T10453 |
5694-5695 |
. |
denotes |
. |
T10454 |
5695-5993 |
sentence |
denotes |
This would be reasonable given the flexibility and differential regulation of site selection for initiation of DNA replication during development or in various cell types, as well as the variability in initiation potential of each replication origin on the genome even within the single cell type. |
T10455 |
5696-5700 |
DT |
denotes |
This |
T10457 |
5701-5706 |
MD |
denotes |
would |
T10456 |
5707-5709 |
VB |
denotes |
be |
T10458 |
5710-5720 |
JJ |
denotes |
reasonable |
T10459 |
5721-5726 |
VBN |
denotes |
given |
T10460 |
5727-5730 |
DT |
denotes |
the |
T10461 |
5731-5742 |
NN |
denotes |
flexibility |
T10462 |
5743-5746 |
CC |
denotes |
and |
T10463 |
5747-5759 |
JJ |
denotes |
differential |
T10464 |
5760-5770 |
NN |
denotes |
regulation |
T10465 |
5771-5773 |
IN |
denotes |
of |
T10466 |
5774-5778 |
NN |
denotes |
site |
T10467 |
5779-5788 |
NN |
denotes |
selection |
T10468 |
5789-5792 |
IN |
denotes |
for |
T10469 |
5793-5803 |
NN |
denotes |
initiation |
T10470 |
5804-5806 |
IN |
denotes |
of |
T10471 |
5807-5810 |
NN |
denotes |
DNA |
T10472 |
5811-5822 |
NN |
denotes |
replication |
T10473 |
5823-5829 |
IN |
denotes |
during |
T10474 |
5830-5841 |
NN |
denotes |
development |
T10475 |
5842-5844 |
CC |
denotes |
or |
T10476 |
5845-5847 |
IN |
denotes |
in |
T10477 |
5848-5855 |
JJ |
denotes |
various |
T10479 |
5856-5860 |
NN |
denotes |
cell |
T10478 |
5861-5866 |
NNS |
denotes |
types |
T10480 |
5866-5868 |
, |
denotes |
, |
T10481 |
5868-5870 |
RB |
denotes |
as |
T10483 |
5871-5875 |
RB |
denotes |
well |
T10482 |
5876-5878 |
IN |
denotes |
as |
T10484 |
5879-5882 |
DT |
denotes |
the |
T10485 |
5883-5894 |
NN |
denotes |
variability |
T10486 |
5895-5897 |
IN |
denotes |
in |
T10487 |
5898-5908 |
NN |
denotes |
initiation |
T10488 |
5909-5918 |
NN |
denotes |
potential |
T10489 |
5919-5921 |
IN |
denotes |
of |
T10490 |
5922-5926 |
DT |
denotes |
each |
T10492 |
5927-5938 |
NN |
denotes |
replication |
T10491 |
5939-5945 |
NN |
denotes |
origin |
T10493 |
5946-5948 |
IN |
denotes |
on |
T10494 |
5949-5952 |
DT |
denotes |
the |
T10495 |
5953-5959 |
NN |
denotes |
genome |
T10496 |
5960-5964 |
RB |
denotes |
even |
T10497 |
5965-5971 |
IN |
denotes |
within |
T10498 |
5972-5975 |
DT |
denotes |
the |
T10500 |
5976-5982 |
JJ |
denotes |
single |
T10501 |
5983-5987 |
NN |
denotes |
cell |
T10499 |
5988-5992 |
NN |
denotes |
type |
T10502 |
5992-5993 |
. |
denotes |
. |
T10855 |
5995-5999 |
NN |
denotes |
Mcm4 |
T10857 |
5999-6000 |
HYPH |
denotes |
/ |
T10858 |
6000-6001 |
CD |
denotes |
6 |
T10859 |
6001-6002 |
HYPH |
denotes |
/ |
T10860 |
6002-6003 |
CD |
denotes |
7 |
T10856 |
6004-6012 |
NN |
denotes |
helicase |
T10861 |
6013-6019 |
IN |
denotes |
during |
T10862 |
6020-6030 |
JJ |
denotes |
processive |
T10863 |
6031-6040 |
NN |
denotes |
unwinding |
T10864 |
6041-6043 |
IN |
denotes |
at |
T10865 |
6044-6047 |
DT |
denotes |
the |
T10866 |
6048-6052 |
NN |
denotes |
fork |
T10867 |
6052-6238 |
sentence |
denotes |
The specific requirement of single-stranded thymine residues for activation of Mcm helicase prompted us to examine whether they are required also for processive unwinding of duplex DNA. |
T10868 |
6053-6056 |
DT |
denotes |
The |
T10870 |
6057-6065 |
JJ |
denotes |
specific |
T10869 |
6066-6077 |
NN |
denotes |
requirement |
T10872 |
6078-6080 |
IN |
denotes |
of |
T10873 |
6081-6087 |
JJ |
denotes |
single |
T10875 |
6087-6088 |
HYPH |
denotes |
- |
T10874 |
6088-6096 |
VBN |
denotes |
stranded |
T10877 |
6097-6104 |
NN |
denotes |
thymine |
T10876 |
6105-6113 |
NNS |
denotes |
residues |
T10878 |
6114-6117 |
IN |
denotes |
for |
T10879 |
6118-6128 |
NN |
denotes |
activation |
T10880 |
6129-6131 |
IN |
denotes |
of |
T10881 |
6132-6135 |
NN |
denotes |
Mcm |
T10882 |
6136-6144 |
NN |
denotes |
helicase |
T10871 |
6145-6153 |
VBD |
denotes |
prompted |
T10883 |
6154-6156 |
PRP |
denotes |
us |
T10884 |
6157-6159 |
TO |
denotes |
to |
T10885 |
6160-6167 |
VB |
denotes |
examine |
T10886 |
6168-6175 |
IN |
denotes |
whether |
T10888 |
6176-6180 |
PRP |
denotes |
they |
T10889 |
6181-6184 |
VBP |
denotes |
are |
T10887 |
6185-6193 |
VBN |
denotes |
required |
T10890 |
6194-6198 |
RB |
denotes |
also |
T10891 |
6199-6202 |
IN |
denotes |
for |
T10892 |
6203-6213 |
JJ |
denotes |
processive |
T10893 |
6214-6223 |
NN |
denotes |
unwinding |
T10894 |
6224-6226 |
IN |
denotes |
of |
T10895 |
6227-6233 |
NN |
denotes |
duplex |
T10896 |
6234-6237 |
NN |
denotes |
DNA |
T10897 |
6237-6238 |
. |
denotes |
. |
T10898 |
6238-6358 |
sentence |
denotes |
Our results indicated that increase of GC pair in the duplex segment significantly inhibited the Mcm helicase activity. |
T10899 |
6239-6242 |
PRP$ |
denotes |
Our |
T10900 |
6243-6250 |
NNS |
denotes |
results |
T10901 |
6251-6260 |
VBD |
denotes |
indicated |
T10902 |
6261-6265 |
IN |
denotes |
that |
T10904 |
6266-6274 |
NN |
denotes |
increase |
T10905 |
6275-6277 |
IN |
denotes |
of |
T10906 |
6278-6280 |
NN |
denotes |
GC |
T10907 |
6281-6285 |
NN |
denotes |
pair |
T10908 |
6286-6288 |
IN |
denotes |
in |
T10909 |
6289-6292 |
DT |
denotes |
the |
T10911 |
6293-6299 |
NN |
denotes |
duplex |
T10910 |
6300-6307 |
NN |
denotes |
segment |
T10912 |
6308-6321 |
RB |
denotes |
significantly |
T10903 |
6322-6331 |
VBD |
denotes |
inhibited |
T10913 |
6332-6335 |
DT |
denotes |
the |
T10915 |
6336-6339 |
NN |
denotes |
Mcm |
T10916 |
6340-6348 |
NN |
denotes |
helicase |
T10914 |
6349-6357 |
NN |
denotes |
activity |
T10917 |
6357-6358 |
. |
denotes |
. |
T10918 |
6358-6530 |
sentence |
denotes |
Duplex DNA composed only of GC pairs (10 repeats of CGG) on a Y-fork was not displaced at all, while the same template was readily displaced by SV40 T-antigen (Figure 8B). |
T10919 |
6359-6365 |
NN |
denotes |
Duplex |
T10920 |
6366-6369 |
NN |
denotes |
DNA |
T10922 |
6370-6378 |
VBN |
denotes |
composed |
T10923 |
6379-6383 |
RB |
denotes |
only |
T10924 |
6384-6386 |
IN |
denotes |
of |
T10925 |
6387-6389 |
NN |
denotes |
GC |
T10926 |
6390-6395 |
NNS |
denotes |
pairs |
T10927 |
6396-6397 |
-LRB- |
denotes |
( |
T10929 |
6397-6399 |
CD |
denotes |
10 |
T10928 |
6400-6407 |
NNS |
denotes |
repeats |
T10930 |
6408-6410 |
IN |
denotes |
of |
T10931 |
6411-6414 |
NN |
denotes |
CGG |
T10932 |
6414-6415 |
-RRB- |
denotes |
) |
T10933 |
6416-6418 |
IN |
denotes |
on |
T10934 |
6419-6420 |
DT |
denotes |
a |
T10936 |
6421-6422 |
NN |
denotes |
Y |
T10937 |
6422-6423 |
HYPH |
denotes |
- |
T10935 |
6423-6427 |
NN |
denotes |
fork |
T10938 |
6428-6431 |
VBD |
denotes |
was |
T10939 |
6432-6435 |
RB |
denotes |
not |
T10921 |
6436-6445 |
VBN |
denotes |
displaced |
T10940 |
6446-6448 |
RB |
denotes |
at |
T10941 |
6449-6452 |
RB |
denotes |
all |
T10942 |
6452-6454 |
, |
denotes |
, |
T10943 |
6454-6459 |
IN |
denotes |
while |
T10945 |
6460-6463 |
DT |
denotes |
the |
T10947 |
6464-6468 |
JJ |
denotes |
same |
T10946 |
6469-6477 |
NN |
denotes |
template |
T10948 |
6478-6481 |
VBD |
denotes |
was |
T10949 |
6482-6489 |
RB |
denotes |
readily |
T10944 |
6490-6499 |
VBN |
denotes |
displaced |
T10950 |
6500-6502 |
IN |
denotes |
by |
T10951 |
6503-6507 |
NN |
denotes |
SV40 |
T10953 |
6508-6509 |
NN |
denotes |
T |
T10954 |
6509-6510 |
HYPH |
denotes |
- |
T10952 |
6510-6517 |
NN |
denotes |
antigen |
T10955 |
6518-6519 |
-LRB- |
denotes |
( |
T10957 |
6519-6525 |
NN |
denotes |
Figure |
T10956 |
6526-6528 |
NN |
denotes |
8B |
T10958 |
6528-6529 |
-RRB- |
denotes |
) |
T10959 |
6529-6530 |
. |
denotes |
. |
T10960 |
6530-6666 |
sentence |
denotes |
Mcm helicase was inhibited by the presence of GC-rich duplex segment also on a circular single-stranded partial heteroduplex substrate. |
T10961 |
6531-6534 |
NN |
denotes |
Mcm |
T10962 |
6535-6543 |
NN |
denotes |
helicase |
T10964 |
6544-6547 |
VBD |
denotes |
was |
T10963 |
6548-6557 |
VBN |
denotes |
inhibited |
T10965 |
6558-6560 |
IN |
denotes |
by |
T10966 |
6561-6564 |
DT |
denotes |
the |
T10967 |
6565-6573 |
NN |
denotes |
presence |
T10968 |
6574-6576 |
IN |
denotes |
of |
T10969 |
6577-6579 |
NN |
denotes |
GC |
T10971 |
6579-6580 |
HYPH |
denotes |
- |
T10970 |
6580-6584 |
JJ |
denotes |
rich |
T10973 |
6585-6591 |
NN |
denotes |
duplex |
T10972 |
6592-6599 |
NN |
denotes |
segment |
T10974 |
6600-6604 |
RB |
denotes |
also |
T10975 |
6605-6607 |
IN |
denotes |
on |
T10976 |
6608-6609 |
DT |
denotes |
a |
T10978 |
6610-6618 |
JJ |
denotes |
circular |
T10979 |
6619-6625 |
JJ |
denotes |
single |
T10981 |
6625-6626 |
HYPH |
denotes |
- |
T10980 |
6626-6634 |
VBN |
denotes |
stranded |
T10982 |
6635-6642 |
JJ |
denotes |
partial |
T10983 |
6643-6655 |
NN |
denotes |
heteroduplex |
T10977 |
6656-6665 |
NN |
denotes |
substrate |
T10984 |
6665-6666 |
. |
denotes |
. |
T10985 |
6666-6824 |
sentence |
denotes |
However, on this substrate, Mcm4/6/7 was able to displace DNA past the GC-rich region, albeit to a limited extent, when it was added at a high concentration. |
T10986 |
6667-6674 |
RB |
denotes |
However |
T10988 |
6674-6676 |
, |
denotes |
, |
T10989 |
6676-6678 |
IN |
denotes |
on |
T10990 |
6679-6683 |
DT |
denotes |
this |
T10991 |
6684-6693 |
NN |
denotes |
substrate |
T10992 |
6693-6695 |
, |
denotes |
, |
T10993 |
6695-6699 |
NN |
denotes |
Mcm4 |
T10994 |
6699-6700 |
HYPH |
denotes |
/ |
T10995 |
6700-6701 |
CD |
denotes |
6 |
T10996 |
6701-6702 |
HYPH |
denotes |
/ |
T10997 |
6702-6703 |
CD |
denotes |
7 |
T10987 |
6704-6707 |
VBD |
denotes |
was |
T10998 |
6708-6712 |
JJ |
denotes |
able |
T10999 |
6713-6715 |
TO |
denotes |
to |
T11000 |
6716-6724 |
VB |
denotes |
displace |
T11001 |
6725-6728 |
NN |
denotes |
DNA |
T11002 |
6729-6733 |
IN |
denotes |
past |
T11003 |
6734-6737 |
DT |
denotes |
the |
T11005 |
6738-6740 |
NN |
denotes |
GC |
T11007 |
6740-6741 |
HYPH |
denotes |
- |
T11006 |
6741-6745 |
JJ |
denotes |
rich |
T11004 |
6746-6752 |
NN |
denotes |
region |
T11008 |
6752-6754 |
, |
denotes |
, |
T11009 |
6754-6760 |
IN |
denotes |
albeit |
T11010 |
6761-6763 |
IN |
denotes |
to |
T11011 |
6764-6765 |
DT |
denotes |
a |
T11013 |
6766-6773 |
VBN |
denotes |
limited |
T11012 |
6774-6780 |
NN |
denotes |
extent |
T11014 |
6780-6782 |
, |
denotes |
, |
T11015 |
6782-6786 |
WRB |
denotes |
when |
T11017 |
6787-6789 |
PRP |
denotes |
it |
T11018 |
6790-6793 |
VBD |
denotes |
was |
T11016 |
6794-6799 |
VBN |
denotes |
added |
T11019 |
6800-6802 |
IN |
denotes |
at |
T11020 |
6803-6804 |
DT |
denotes |
a |
T11022 |
6805-6809 |
JJ |
denotes |
high |
T11021 |
6810-6823 |
NN |
denotes |
concentration |
T11023 |
6823-6824 |
. |
denotes |
. |
T11024 |
6824-6991 |
sentence |
denotes |
On the partial heteroduplex template, Mcm is loaded onto the circular single-stranded DNA of 6.4 kb, while it is loaded onto the 50 nt long 3′-tail DNA on the Y-fork. |
T11025 |
6825-6827 |
IN |
denotes |
On |
T11027 |
6828-6831 |
DT |
denotes |
the |
T11029 |
6832-6839 |
JJ |
denotes |
partial |
T11030 |
6840-6852 |
NN |
denotes |
heteroduplex |
T11028 |
6853-6861 |
NN |
denotes |
template |
T11031 |
6861-6863 |
, |
denotes |
, |
T11032 |
6863-6866 |
NN |
denotes |
Mcm |
T11033 |
6867-6869 |
VBZ |
denotes |
is |
T11026 |
6870-6876 |
VBN |
denotes |
loaded |
T11034 |
6877-6881 |
IN |
denotes |
onto |
T11035 |
6882-6885 |
DT |
denotes |
the |
T11037 |
6886-6894 |
JJ |
denotes |
circular |
T11038 |
6895-6901 |
JJ |
denotes |
single |
T11040 |
6901-6902 |
HYPH |
denotes |
- |
T11039 |
6902-6910 |
VBN |
denotes |
stranded |
T11036 |
6911-6914 |
NN |
denotes |
DNA |
T11041 |
6915-6917 |
IN |
denotes |
of |
T11042 |
6918-6921 |
CD |
denotes |
6.4 |
T11043 |
6922-6924 |
NN |
denotes |
kb |
T11044 |
6924-6926 |
, |
denotes |
, |
T11045 |
6926-6931 |
IN |
denotes |
while |
T11047 |
6932-6934 |
PRP |
denotes |
it |
T11048 |
6935-6937 |
VBZ |
denotes |
is |
T11046 |
6938-6944 |
VBN |
denotes |
loaded |
T11049 |
6945-6949 |
IN |
denotes |
onto |
T11050 |
6950-6953 |
DT |
denotes |
the |
T11052 |
6954-6956 |
CD |
denotes |
50 |
T11053 |
6957-6959 |
NN |
denotes |
nt |
T11054 |
6960-6964 |
JJ |
denotes |
long |
T11055 |
6965-6966 |
CD |
denotes |
3 |
T11057 |
6966-6967 |
SYM |
denotes |
′ |
T11058 |
6967-6968 |
HYPH |
denotes |
- |
T11056 |
6968-6972 |
NN |
denotes |
tail |
T11051 |
6973-6976 |
NN |
denotes |
DNA |
T11059 |
6977-6979 |
IN |
denotes |
on |
T11060 |
6980-6983 |
DT |
denotes |
the |
T11062 |
6984-6985 |
NN |
denotes |
Y |
T11063 |
6985-6986 |
HYPH |
denotes |
- |
T11061 |
6986-6990 |
NN |
denotes |
fork |
T11064 |
6990-6991 |
. |
denotes |
. |
T11065 |
6991-7075 |
sentence |
denotes |
Thus, the difference of helicase actions may reflect the efficiency of Mcm loading. |
T11066 |
6992-6996 |
RB |
denotes |
Thus |
T11068 |
6996-6998 |
, |
denotes |
, |
T11069 |
6998-7001 |
DT |
denotes |
the |
T11070 |
7002-7012 |
NN |
denotes |
difference |
T11071 |
7013-7015 |
IN |
denotes |
of |
T11072 |
7016-7024 |
NN |
denotes |
helicase |
T11073 |
7025-7032 |
NNS |
denotes |
actions |
T11074 |
7033-7036 |
MD |
denotes |
may |
T11067 |
7037-7044 |
VB |
denotes |
reflect |
T11075 |
7045-7048 |
DT |
denotes |
the |
T11076 |
7049-7059 |
NN |
denotes |
efficiency |
T11077 |
7060-7062 |
IN |
denotes |
of |
T11078 |
7063-7066 |
NN |
denotes |
Mcm |
T11079 |
7067-7074 |
NN |
denotes |
loading |
T11080 |
7074-7075 |
. |
denotes |
. |
T11081 |
7075-7292 |
sentence |
denotes |
Alternatively, the presence of ‘random’ sequence at the initially unwound duplex segment in the former template may engage the Mcm helicase in a more active conformation which can displace the GC-rich duplex segment. |
T11082 |
7076-7089 |
RB |
denotes |
Alternatively |
T11084 |
7089-7091 |
, |
denotes |
, |
T11085 |
7091-7094 |
DT |
denotes |
the |
T11086 |
7095-7103 |
NN |
denotes |
presence |
T11087 |
7104-7106 |
IN |
denotes |
of |
T11088 |
7107-7108 |
`` |
denotes |
‘ |
T11089 |
7108-7114 |
JJ |
denotes |
random |
T11091 |
7114-7115 |
'' |
denotes |
’ |
T11090 |
7116-7124 |
NN |
denotes |
sequence |
T11092 |
7125-7127 |
IN |
denotes |
at |
T11093 |
7128-7131 |
DT |
denotes |
the |
T11095 |
7132-7141 |
RB |
denotes |
initially |
T11096 |
7142-7149 |
JJ |
denotes |
unwound |
T11097 |
7150-7156 |
NN |
denotes |
duplex |
T11094 |
7157-7164 |
NN |
denotes |
segment |
T11098 |
7165-7167 |
IN |
denotes |
in |
T11099 |
7168-7171 |
DT |
denotes |
the |
T11101 |
7172-7178 |
JJ |
denotes |
former |
T11100 |
7179-7187 |
NN |
denotes |
template |
T11102 |
7188-7191 |
MD |
denotes |
may |
T11083 |
7192-7198 |
VB |
denotes |
engage |
T11103 |
7199-7202 |
DT |
denotes |
the |
T11105 |
7203-7206 |
NN |
denotes |
Mcm |
T11104 |
7207-7215 |
NN |
denotes |
helicase |
T11106 |
7216-7218 |
IN |
denotes |
in |
T11107 |
7219-7220 |
DT |
denotes |
a |
T11109 |
7221-7225 |
RBR |
denotes |
more |
T11110 |
7226-7232 |
JJ |
denotes |
active |
T11108 |
7233-7245 |
NN |
denotes |
conformation |
T11111 |
7246-7251 |
WDT |
denotes |
which |
T11113 |
7252-7255 |
MD |
denotes |
can |
T11112 |
7256-7264 |
VB |
denotes |
displace |
T11114 |
7265-7268 |
DT |
denotes |
the |
T11116 |
7269-7271 |
NN |
denotes |
GC |
T11118 |
7271-7272 |
HYPH |
denotes |
- |
T11117 |
7272-7276 |
JJ |
denotes |
rich |
T11119 |
7277-7283 |
NN |
denotes |
duplex |
T11115 |
7284-7291 |
NN |
denotes |
segment |
T11120 |
7291-7292 |
. |
denotes |
. |
T11121 |
7292-7398 |
sentence |
denotes |
On Y-fork substrates, increase of AT base pairs in the duplex (10 repeats of CTT) restored the unwinding. |
T11122 |
7293-7295 |
IN |
denotes |
On |
T11124 |
7296-7297 |
NN |
denotes |
Y |
T11126 |
7297-7298 |
HYPH |
denotes |
- |
T11125 |
7298-7302 |
NN |
denotes |
fork |
T11127 |
7303-7313 |
NNS |
denotes |
substrates |
T11128 |
7313-7315 |
, |
denotes |
, |
T11129 |
7315-7323 |
NN |
denotes |
increase |
T11130 |
7324-7326 |
IN |
denotes |
of |
T11131 |
7327-7329 |
NN |
denotes |
AT |
T11133 |
7330-7334 |
NN |
denotes |
base |
T11132 |
7335-7340 |
NNS |
denotes |
pairs |
T11134 |
7341-7343 |
IN |
denotes |
in |
T11135 |
7344-7347 |
DT |
denotes |
the |
T11136 |
7348-7354 |
NN |
denotes |
duplex |
T11137 |
7355-7356 |
-LRB- |
denotes |
( |
T11139 |
7356-7358 |
CD |
denotes |
10 |
T11138 |
7359-7366 |
NNS |
denotes |
repeats |
T11140 |
7367-7369 |
IN |
denotes |
of |
T11141 |
7370-7373 |
NN |
denotes |
CTT |
T11142 |
7373-7374 |
-RRB- |
denotes |
) |
T11123 |
7375-7383 |
VBD |
denotes |
restored |
T11143 |
7384-7387 |
DT |
denotes |
the |
T11144 |
7388-7397 |
NN |
denotes |
unwinding |
T11145 |
7397-7398 |
. |
denotes |
. |
T11146 |
7398-7586 |
sentence |
denotes |
These results indicate either that thymine residues are required on the duplex DNA for continuous unwinding, or that Mcm4/6/7 is simply not efficient enough to unwind the stable GC pairs. |
T11147 |
7399-7404 |
DT |
denotes |
These |
T11148 |
7405-7412 |
NNS |
denotes |
results |
T11149 |
7413-7421 |
VBP |
denotes |
indicate |
T11150 |
7422-7428 |
CC |
denotes |
either |
T11152 |
7429-7433 |
IN |
denotes |
that |
T11153 |
7434-7441 |
NN |
denotes |
thymine |
T11154 |
7442-7450 |
NNS |
denotes |
residues |
T11155 |
7451-7454 |
VBP |
denotes |
are |
T11151 |
7455-7463 |
VBN |
denotes |
required |
T11156 |
7464-7466 |
IN |
denotes |
on |
T11157 |
7467-7470 |
DT |
denotes |
the |
T11159 |
7471-7477 |
NN |
denotes |
duplex |
T11158 |
7478-7481 |
NN |
denotes |
DNA |
T11160 |
7482-7485 |
IN |
denotes |
for |
T11161 |
7486-7496 |
JJ |
denotes |
continuous |
T11162 |
7497-7506 |
NN |
denotes |
unwinding |
T11163 |
7506-7508 |
, |
denotes |
, |
T11164 |
7508-7510 |
CC |
denotes |
or |
T11165 |
7511-7515 |
IN |
denotes |
that |
T11167 |
7516-7520 |
NN |
denotes |
Mcm4 |
T11168 |
7520-7521 |
HYPH |
denotes |
/ |
T11169 |
7521-7522 |
CD |
denotes |
6 |
T11170 |
7522-7523 |
HYPH |
denotes |
/ |
T11171 |
7523-7524 |
CD |
denotes |
7 |
T11166 |
7525-7527 |
VBZ |
denotes |
is |
T11172 |
7528-7534 |
RB |
denotes |
simply |
T11173 |
7535-7538 |
RB |
denotes |
not |
T11174 |
7539-7548 |
JJ |
denotes |
efficient |
T11175 |
7549-7555 |
RB |
denotes |
enough |
T11176 |
7556-7558 |
TO |
denotes |
to |
T11177 |
7559-7565 |
VB |
denotes |
unwind |
T11178 |
7566-7569 |
DT |
denotes |
the |
T11180 |
7570-7576 |
JJ |
denotes |
stable |
T11181 |
7577-7579 |
NN |
denotes |
GC |
T11179 |
7580-7585 |
NNS |
denotes |
pairs |
T11182 |
7585-7586 |
. |
denotes |
. |
T11183 |
7586-7908 |
sentence |
denotes |
Replacement of the central guanosine with inosine in the CGG repeat duplex DNA resulted in displacement (Figure 8E) (31), suggesting that the continuous presence of AT base pair may not be essential for the Mcm helicase function and that the thermostability of GC base pairs is inhibitory for helicase action of Mcm4/6/7. |
T11184 |
7587-7598 |
NN |
denotes |
Replacement |
T11186 |
7599-7601 |
IN |
denotes |
of |
T11187 |
7602-7605 |
DT |
denotes |
the |
T11189 |
7606-7613 |
JJ |
denotes |
central |
T11188 |
7614-7623 |
NN |
denotes |
guanosine |
T11190 |
7624-7628 |
IN |
denotes |
with |
T11191 |
7629-7636 |
NN |
denotes |
inosine |
T11192 |
7637-7639 |
IN |
denotes |
in |
T11193 |
7640-7643 |
DT |
denotes |
the |
T11195 |
7644-7647 |
NN |
denotes |
CGG |
T11196 |
7648-7654 |
NN |
denotes |
repeat |
T11197 |
7655-7661 |
NN |
denotes |
duplex |
T11194 |
7662-7665 |
NN |
denotes |
DNA |
T11185 |
7666-7674 |
VBD |
denotes |
resulted |
T11198 |
7675-7677 |
IN |
denotes |
in |
T11199 |
7678-7690 |
NN |
denotes |
displacement |
T11200 |
7691-7692 |
-LRB- |
denotes |
( |
T11202 |
7692-7698 |
NN |
denotes |
Figure |
T11201 |
7699-7701 |
NN |
denotes |
8E |
T11203 |
7701-7702 |
-RRB- |
denotes |
) |
T11204 |
7703-7704 |
-LRB- |
denotes |
( |
T11205 |
7704-7706 |
CD |
denotes |
31 |
T11206 |
7706-7707 |
-RRB- |
denotes |
) |
T11207 |
7707-7709 |
, |
denotes |
, |
T11208 |
7709-7719 |
VBG |
denotes |
suggesting |
T11209 |
7720-7724 |
IN |
denotes |
that |
T11211 |
7725-7728 |
DT |
denotes |
the |
T11213 |
7729-7739 |
JJ |
denotes |
continuous |
T11212 |
7740-7748 |
NN |
denotes |
presence |
T11214 |
7749-7751 |
IN |
denotes |
of |
T11215 |
7752-7754 |
NN |
denotes |
AT |
T11217 |
7755-7759 |
NN |
denotes |
base |
T11216 |
7760-7764 |
NN |
denotes |
pair |
T11218 |
7765-7768 |
MD |
denotes |
may |
T11219 |
7769-7772 |
RB |
denotes |
not |
T11210 |
7773-7775 |
VB |
denotes |
be |
T11220 |
7776-7785 |
JJ |
denotes |
essential |
T11221 |
7786-7789 |
IN |
denotes |
for |
T11222 |
7790-7793 |
DT |
denotes |
the |
T11224 |
7794-7797 |
NN |
denotes |
Mcm |
T11225 |
7798-7806 |
NN |
denotes |
helicase |
T11223 |
7807-7815 |
NN |
denotes |
function |
T11226 |
7816-7819 |
CC |
denotes |
and |
T11227 |
7820-7824 |
IN |
denotes |
that |
T11229 |
7825-7828 |
DT |
denotes |
the |
T11230 |
7829-7844 |
NN |
denotes |
thermostability |
T11231 |
7845-7847 |
IN |
denotes |
of |
T11232 |
7848-7850 |
NN |
denotes |
GC |
T11234 |
7851-7855 |
NN |
denotes |
base |
T11233 |
7856-7861 |
NNS |
denotes |
pairs |
T11228 |
7862-7864 |
VBZ |
denotes |
is |
T11235 |
7865-7875 |
JJ |
denotes |
inhibitory |
T11236 |
7876-7879 |
IN |
denotes |
for |
T11237 |
7880-7888 |
NN |
denotes |
helicase |
T11238 |
7889-7895 |
NN |
denotes |
action |
T11239 |
7896-7898 |
IN |
denotes |
of |
T11240 |
7899-7903 |
NN |
denotes |
Mcm4 |
T11241 |
7903-7904 |
HYPH |
denotes |
/ |
T11242 |
7904-7905 |
CD |
denotes |
6 |
T11243 |
7905-7906 |
HYPH |
denotes |
/ |
T11244 |
7906-7907 |
CD |
denotes |
7 |
T11245 |
7907-7908 |
. |
denotes |
. |
T11246 |
7908-8097 |
sentence |
denotes |
The results described in this manuscript reveal potentially important features of mammalian Mcm4/6/7 helicase, which is likely to be a key component of the eukaryotic replicative helicase. |
T11247 |
7909-7912 |
DT |
denotes |
The |
T11248 |
7913-7920 |
NNS |
denotes |
results |
T11250 |
7921-7930 |
VBN |
denotes |
described |
T11251 |
7931-7933 |
IN |
denotes |
in |
T11252 |
7934-7938 |
DT |
denotes |
this |
T11253 |
7939-7949 |
NN |
denotes |
manuscript |
T11249 |
7950-7956 |
VBP |
denotes |
reveal |
T11254 |
7957-7968 |
RB |
denotes |
potentially |
T11255 |
7969-7978 |
JJ |
denotes |
important |
T11256 |
7979-7987 |
NNS |
denotes |
features |
T11257 |
7988-7990 |
IN |
denotes |
of |
T11258 |
7991-8000 |
JJ |
denotes |
mammalian |
T11260 |
8001-8005 |
NN |
denotes |
Mcm4 |
T11261 |
8005-8006 |
HYPH |
denotes |
/ |
T11262 |
8006-8007 |
CD |
denotes |
6 |
T11263 |
8007-8008 |
HYPH |
denotes |
/ |
T11264 |
8008-8009 |
CD |
denotes |
7 |
T11259 |
8010-8018 |
NN |
denotes |
helicase |
T11265 |
8018-8020 |
, |
denotes |
, |
T11266 |
8020-8025 |
WDT |
denotes |
which |
T11267 |
8026-8028 |
VBZ |
denotes |
is |
T11268 |
8029-8035 |
JJ |
denotes |
likely |
T11269 |
8036-8038 |
TO |
denotes |
to |
T11270 |
8039-8041 |
VB |
denotes |
be |
T11271 |
8042-8043 |
DT |
denotes |
a |
T11273 |
8044-8047 |
JJ |
denotes |
key |
T11272 |
8048-8057 |
NN |
denotes |
component |
T11274 |
8058-8060 |
IN |
denotes |
of |
T11275 |
8061-8064 |
DT |
denotes |
the |
T11277 |
8065-8075 |
JJ |
denotes |
eukaryotic |
T11278 |
8076-8087 |
JJ |
denotes |
replicative |
T11276 |
8088-8096 |
NN |
denotes |
helicase |
T11279 |
8096-8097 |
. |
denotes |
. |
T11280 |
8097-8361 |
sentence |
denotes |
Prior to initiation of DNA replication, Mcm helicase may adopt a double hexameric complex at the partially melted origin region, and may catalyze concurrent unwinding of duplex DNA into both directions, while stably associated with the origins of DNA replication. |
T11281 |
8098-8103 |
JJ |
denotes |
Prior |
T11282 |
8104-8106 |
IN |
denotes |
to |
T11284 |
8107-8117 |
NN |
denotes |
initiation |
T11285 |
8118-8120 |
IN |
denotes |
of |
T11286 |
8121-8124 |
NN |
denotes |
DNA |
T11287 |
8125-8136 |
NN |
denotes |
replication |
T11288 |
8136-8138 |
, |
denotes |
, |
T11289 |
8138-8141 |
NN |
denotes |
Mcm |
T11290 |
8142-8150 |
NN |
denotes |
helicase |
T11291 |
8151-8154 |
MD |
denotes |
may |
T11283 |
8155-8160 |
VB |
denotes |
adopt |
T11292 |
8161-8162 |
DT |
denotes |
a |
T11294 |
8163-8169 |
JJ |
denotes |
double |
T11295 |
8170-8179 |
JJ |
denotes |
hexameric |
T11293 |
8180-8187 |
NN |
denotes |
complex |
T11296 |
8188-8190 |
IN |
denotes |
at |
T11297 |
8191-8194 |
DT |
denotes |
the |
T11299 |
8195-8204 |
RB |
denotes |
partially |
T11300 |
8205-8211 |
VBN |
denotes |
melted |
T11301 |
8212-8218 |
NN |
denotes |
origin |
T11298 |
8219-8225 |
NN |
denotes |
region |
T11302 |
8225-8227 |
, |
denotes |
, |
T11303 |
8227-8230 |
CC |
denotes |
and |
T11304 |
8231-8234 |
MD |
denotes |
may |
T11305 |
8235-8243 |
VB |
denotes |
catalyze |
T11306 |
8244-8254 |
JJ |
denotes |
concurrent |
T11307 |
8255-8264 |
NN |
denotes |
unwinding |
T11308 |
8265-8267 |
IN |
denotes |
of |
T11309 |
8268-8274 |
NN |
denotes |
duplex |
T11310 |
8275-8278 |
NN |
denotes |
DNA |
T11311 |
8279-8283 |
IN |
denotes |
into |
T11312 |
8284-8288 |
DT |
denotes |
both |
T11313 |
8289-8299 |
NNS |
denotes |
directions |
T11314 |
8299-8301 |
, |
denotes |
, |
T11315 |
8301-8306 |
IN |
denotes |
while |
T11317 |
8307-8313 |
RB |
denotes |
stably |
T11316 |
8314-8324 |
VBN |
denotes |
associated |
T11318 |
8325-8329 |
IN |
denotes |
with |
T11319 |
8330-8333 |
DT |
denotes |
the |
T11320 |
8334-8341 |
NNS |
denotes |
origins |
T11321 |
8342-8344 |
IN |
denotes |
of |
T11322 |
8345-8348 |
NN |
denotes |
DNA |
T11323 |
8349-8360 |
NN |
denotes |
replication |
T11324 |
8360-8361 |
. |
denotes |
. |
T11325 |
8361-8451 |
sentence |
denotes |
This is similar to the T-antigen model originally proposed by Smelkova and Borowiec (21). |
T11326 |
8362-8366 |
DT |
denotes |
This |
T11327 |
8367-8369 |
VBZ |
denotes |
is |
T11328 |
8370-8377 |
JJ |
denotes |
similar |
T11329 |
8378-8380 |
IN |
denotes |
to |
T11330 |
8381-8384 |
DT |
denotes |
the |
T11332 |
8385-8386 |
NN |
denotes |
T |
T11334 |
8386-8387 |
HYPH |
denotes |
- |
T11333 |
8387-8394 |
NN |
denotes |
antigen |
T11331 |
8395-8400 |
NN |
denotes |
model |
T11335 |
8401-8411 |
RB |
denotes |
originally |
T11336 |
8412-8420 |
VBN |
denotes |
proposed |
T11337 |
8421-8423 |
IN |
denotes |
by |
T11338 |
8424-8432 |
NNP |
denotes |
Smelkova |
T11339 |
8433-8436 |
CC |
denotes |
and |
T11340 |
8437-8445 |
NNP |
denotes |
Borowiec |
T11341 |
8446-8447 |
-LRB- |
denotes |
( |
T11342 |
8447-8449 |
CD |
denotes |
21 |
T11343 |
8449-8450 |
-RRB- |
denotes |
) |
T11344 |
8450-8451 |
. |
denotes |
. |
T11345 |
8451-8640 |
sentence |
denotes |
We propose that, only when both hexamers are activated by the interacting thymine-rich sequences present within the melted region, the Mcm helicase is mobilized and initiation takes place. |
T11346 |
8452-8454 |
PRP |
denotes |
We |
T11347 |
8455-8462 |
VBP |
denotes |
propose |
T11348 |
8463-8467 |
IN |
denotes |
that |
T11350 |
8467-8469 |
, |
denotes |
, |
T11351 |
8469-8473 |
RB |
denotes |
only |
T11353 |
8474-8478 |
WRB |
denotes |
when |
T11354 |
8479-8483 |
DT |
denotes |
both |
T11355 |
8484-8492 |
NNS |
denotes |
hexamers |
T11356 |
8493-8496 |
VBP |
denotes |
are |
T11352 |
8497-8506 |
VBN |
denotes |
activated |
T11357 |
8507-8509 |
IN |
denotes |
by |
T11358 |
8510-8513 |
DT |
denotes |
the |
T11360 |
8514-8525 |
VBG |
denotes |
interacting |
T11361 |
8526-8533 |
NN |
denotes |
thymine |
T11363 |
8533-8534 |
HYPH |
denotes |
- |
T11362 |
8534-8538 |
JJ |
denotes |
rich |
T11359 |
8539-8548 |
NNS |
denotes |
sequences |
T11364 |
8549-8556 |
JJ |
denotes |
present |
T11365 |
8557-8563 |
IN |
denotes |
within |
T11366 |
8564-8567 |
DT |
denotes |
the |
T11368 |
8568-8574 |
VBN |
denotes |
melted |
T11367 |
8575-8581 |
NN |
denotes |
region |
T11369 |
8581-8583 |
, |
denotes |
, |
T11370 |
8583-8586 |
DT |
denotes |
the |
T11372 |
8587-8590 |
NN |
denotes |
Mcm |
T11371 |
8591-8599 |
NN |
denotes |
helicase |
T11373 |
8600-8602 |
VBZ |
denotes |
is |
T11349 |
8603-8612 |
VBN |
denotes |
mobilized |
T11374 |
8613-8616 |
CC |
denotes |
and |
T11375 |
8617-8627 |
NN |
denotes |
initiation |
T11376 |
8628-8633 |
VBZ |
denotes |
takes |
T11377 |
8634-8639 |
NN |
denotes |
place |
T11378 |
8639-8640 |
. |
denotes |
. |
T11379 |
8640-8769 |
sentence |
denotes |
A crucial question is how these double hexameric helicase complexes are generated and turn into active helicases at the origins. |
T11380 |
8641-8642 |
DT |
denotes |
A |
T11382 |
8643-8650 |
JJ |
denotes |
crucial |
T11381 |
8651-8659 |
NN |
denotes |
question |
T11383 |
8660-8662 |
VBZ |
denotes |
is |
T11384 |
8663-8666 |
WRB |
denotes |
how |
T11386 |
8667-8672 |
DT |
denotes |
these |
T11388 |
8673-8679 |
RB |
denotes |
double |
T11389 |
8680-8689 |
JJ |
denotes |
hexameric |
T11390 |
8690-8698 |
NN |
denotes |
helicase |
T11387 |
8699-8708 |
NNS |
denotes |
complexes |
T11391 |
8709-8712 |
VBP |
denotes |
are |
T11385 |
8713-8722 |
VBN |
denotes |
generated |
T11392 |
8723-8726 |
CC |
denotes |
and |
T11393 |
8727-8731 |
VB |
denotes |
turn |
T11394 |
8732-8736 |
IN |
denotes |
into |
T11395 |
8737-8743 |
JJ |
denotes |
active |
T11396 |
8744-8753 |
NNS |
denotes |
helicases |
T11397 |
8754-8756 |
IN |
denotes |
at |
T11398 |
8757-8760 |
DT |
denotes |
the |
T11399 |
8761-8768 |
NNS |
denotes |
origins |
T11400 |
8768-8769 |
. |
denotes |
. |
T11401 |
8769-9023 |
sentence |
denotes |
This process would involve melting of duplex DNA, which may be facilitated by binding of preRC components in the context of proper chromatin structures, or by other unwinding factors including a topoisomerase or a newly identified Mcm8 helicase (34–36). |
T11402 |
8770-8774 |
DT |
denotes |
This |
T11403 |
8775-8782 |
NN |
denotes |
process |
T11405 |
8783-8788 |
MD |
denotes |
would |
T11404 |
8789-8796 |
VB |
denotes |
involve |
T11406 |
8797-8804 |
NN |
denotes |
melting |
T11407 |
8805-8807 |
IN |
denotes |
of |
T11408 |
8808-8814 |
NN |
denotes |
duplex |
T11409 |
8815-8818 |
NN |
denotes |
DNA |
T11410 |
8818-8820 |
, |
denotes |
, |
T11411 |
8820-8825 |
WDT |
denotes |
which |
T11413 |
8826-8829 |
MD |
denotes |
may |
T11414 |
8830-8832 |
VB |
denotes |
be |
T11412 |
8833-8844 |
VBN |
denotes |
facilitated |
T11415 |
8845-8847 |
IN |
denotes |
by |
T11416 |
8848-8855 |
NN |
denotes |
binding |
T11417 |
8856-8858 |
IN |
denotes |
of |
T11418 |
8859-8864 |
NN |
denotes |
preRC |
T11419 |
8865-8875 |
NNS |
denotes |
components |
T11420 |
8876-8878 |
IN |
denotes |
in |
T11421 |
8879-8882 |
DT |
denotes |
the |
T11422 |
8883-8890 |
NN |
denotes |
context |
T11423 |
8891-8893 |
IN |
denotes |
of |
T11424 |
8894-8900 |
JJ |
denotes |
proper |
T11426 |
8901-8910 |
NN |
denotes |
chromatin |
T11425 |
8911-8921 |
NNS |
denotes |
structures |
T11427 |
8921-8923 |
, |
denotes |
, |
T11428 |
8923-8925 |
CC |
denotes |
or |
T11429 |
8926-8928 |
IN |
denotes |
by |
T11430 |
8929-8934 |
JJ |
denotes |
other |
T11432 |
8935-8944 |
JJ |
denotes |
unwinding |
T11431 |
8945-8952 |
NNS |
denotes |
factors |
T11433 |
8953-8962 |
VBG |
denotes |
including |
T11434 |
8963-8964 |
DT |
denotes |
a |
T11435 |
8965-8978 |
NN |
denotes |
topoisomerase |
T11436 |
8979-8981 |
CC |
denotes |
or |
T11437 |
8982-8983 |
DT |
denotes |
a |
T11439 |
8984-8989 |
RB |
denotes |
newly |
T11440 |
8990-9000 |
VBN |
denotes |
identified |
T11441 |
9001-9005 |
NN |
denotes |
Mcm8 |
T11438 |
9006-9014 |
NN |
denotes |
helicase |
T11442 |
9015-9016 |
-LRB- |
denotes |
( |
T11443 |
9016-9018 |
CD |
denotes |
34 |
T11444 |
9018-9019 |
SYM |
denotes |
– |
T11445 |
9019-9021 |
CD |
denotes |
36 |
T11446 |
9021-9022 |
-RRB- |
denotes |
) |
T11447 |
9022-9023 |
. |
denotes |
. |
T11448 |
9023-9171 |
sentence |
denotes |
It may also require association of fork-assisting proteins such as Cdc45 (37,38) as well as phosphorylation events by Cdk and Cdc7 kinases (39,40). |
T11449 |
9024-9026 |
PRP |
denotes |
It |
T11451 |
9027-9030 |
MD |
denotes |
may |
T11452 |
9031-9035 |
RB |
denotes |
also |
T11450 |
9036-9043 |
VB |
denotes |
require |
T11453 |
9044-9055 |
NN |
denotes |
association |
T11454 |
9056-9058 |
IN |
denotes |
of |
T11455 |
9059-9063 |
NN |
denotes |
fork |
T11457 |
9063-9064 |
HYPH |
denotes |
- |
T11456 |
9064-9073 |
VBG |
denotes |
assisting |
T11458 |
9074-9082 |
NN |
denotes |
proteins |
T11459 |
9083-9087 |
JJ |
denotes |
such |
T11460 |
9088-9090 |
IN |
denotes |
as |
T11461 |
9091-9096 |
NN |
denotes |
Cdc45 |
T11462 |
9097-9098 |
-LRB- |
denotes |
( |
T11464 |
9098-9100 |
CD |
denotes |
37 |
T11465 |
9100-9101 |
, |
denotes |
, |
T11463 |
9101-9103 |
CD |
denotes |
38 |
T11466 |
9103-9104 |
-RRB- |
denotes |
) |
T11467 |
9105-9107 |
RB |
denotes |
as |
T11469 |
9108-9112 |
RB |
denotes |
well |
T11468 |
9113-9115 |
IN |
denotes |
as |
T11470 |
9116-9131 |
NN |
denotes |
phosphorylation |
T11471 |
9132-9138 |
NNS |
denotes |
events |
T11472 |
9139-9141 |
IN |
denotes |
by |
T11473 |
9142-9145 |
NN |
denotes |
Cdk |
T11475 |
9146-9149 |
CC |
denotes |
and |
T11476 |
9150-9154 |
NN |
denotes |
Cdc7 |
T11474 |
9155-9162 |
NNS |
denotes |
kinases |
T11477 |
9163-9164 |
-LRB- |
denotes |
( |
T11479 |
9164-9166 |
CD |
denotes |
39 |
T11480 |
9166-9167 |
, |
denotes |
, |
T11478 |
9167-9169 |
CD |
denotes |
40 |
T11481 |
9169-9170 |
-RRB- |
denotes |
) |
T11482 |
9170-9171 |
. |
denotes |
. |
T11483 |
9171-9268 |
sentence |
denotes |
One unexpected finding of this study is low helicase activity of Mcm4/6/7 on GC-rich duplex DNA. |
T11484 |
9172-9175 |
CD |
denotes |
One |
T11486 |
9176-9186 |
JJ |
denotes |
unexpected |
T11485 |
9187-9194 |
NN |
denotes |
finding |
T11488 |
9195-9197 |
IN |
denotes |
of |
T11489 |
9198-9202 |
DT |
denotes |
this |
T11490 |
9203-9208 |
NN |
denotes |
study |
T11487 |
9209-9211 |
VBZ |
denotes |
is |
T11491 |
9212-9215 |
JJ |
denotes |
low |
T11493 |
9216-9224 |
NN |
denotes |
helicase |
T11492 |
9225-9233 |
NN |
denotes |
activity |
T11494 |
9234-9236 |
IN |
denotes |
of |
T11495 |
9237-9241 |
NN |
denotes |
Mcm4 |
T11496 |
9241-9242 |
HYPH |
denotes |
/ |
T11497 |
9242-9243 |
CD |
denotes |
6 |
T11498 |
9243-9244 |
HYPH |
denotes |
/ |
T11499 |
9244-9245 |
CD |
denotes |
7 |
T11500 |
9246-9248 |
IN |
denotes |
on |
T11501 |
9249-9251 |
NN |
denotes |
GC |
T11503 |
9251-9252 |
HYPH |
denotes |
- |
T11502 |
9252-9256 |
JJ |
denotes |
rich |
T11505 |
9257-9263 |
NN |
denotes |
duplex |
T11504 |
9264-9267 |
NN |
denotes |
DNA |
T11506 |
9267-9268 |
. |
denotes |
. |
T11507 |
9268-9453 |
sentence |
denotes |
This, in conjunction with the low processivity of Mcm4/6/7 helicase, strongly indicates that the replicative helicase at the replication forks would require more than Mcm4/6/7 complex. |
T11508 |
9269-9273 |
DT |
denotes |
This |
T11510 |
9273-9275 |
, |
denotes |
, |
T11511 |
9275-9277 |
IN |
denotes |
in |
T11512 |
9278-9289 |
NN |
denotes |
conjunction |
T11513 |
9290-9294 |
IN |
denotes |
with |
T11514 |
9295-9298 |
DT |
denotes |
the |
T11516 |
9299-9302 |
JJ |
denotes |
low |
T11515 |
9303-9315 |
NN |
denotes |
processivity |
T11517 |
9316-9318 |
IN |
denotes |
of |
T11518 |
9319-9323 |
NN |
denotes |
Mcm4 |
T11520 |
9323-9324 |
HYPH |
denotes |
/ |
T11521 |
9324-9325 |
CD |
denotes |
6 |
T11522 |
9325-9326 |
HYPH |
denotes |
/ |
T11523 |
9326-9327 |
CD |
denotes |
7 |
T11519 |
9328-9336 |
NN |
denotes |
helicase |
T11524 |
9336-9338 |
, |
denotes |
, |
T11525 |
9338-9346 |
RB |
denotes |
strongly |
T11509 |
9347-9356 |
VBZ |
denotes |
indicates |
T11526 |
9357-9361 |
IN |
denotes |
that |
T11528 |
9362-9365 |
DT |
denotes |
the |
T11530 |
9366-9377 |
JJ |
denotes |
replicative |
T11529 |
9378-9386 |
NN |
denotes |
helicase |
T11531 |
9387-9389 |
IN |
denotes |
at |
T11532 |
9390-9393 |
DT |
denotes |
the |
T11534 |
9394-9405 |
NN |
denotes |
replication |
T11533 |
9406-9411 |
NNS |
denotes |
forks |
T11535 |
9412-9417 |
MD |
denotes |
would |
T11527 |
9418-9425 |
VB |
denotes |
require |
T11536 |
9426-9430 |
JJR |
denotes |
more |
T11537 |
9431-9435 |
IN |
denotes |
than |
T11538 |
9436-9440 |
NN |
denotes |
Mcm4 |
T11540 |
9440-9441 |
HYPH |
denotes |
/ |
T11541 |
9441-9442 |
CD |
denotes |
6 |
T11542 |
9442-9443 |
HYPH |
denotes |
/ |
T11543 |
9443-9444 |
CD |
denotes |
7 |
T11539 |
9445-9452 |
NN |
denotes |
complex |
T11544 |
9452-9453 |
. |
denotes |
. |
T11545 |
9453-9792 |
sentence |
denotes |
During the processive unwinding of duplex DNA replication forks, Mcm4/6/7 may be further stimulated by interaction with other proteins, including remaining Mcm subunits, Cdc45 (37,38), GINS (41,42), DNA polymerase subunits (43), Mcm8 (35,36), etc. to become a truly processive and potent helicase capable of replicating the entire genome. |
T11546 |
9454-9460 |
IN |
denotes |
During |
T11548 |
9461-9464 |
DT |
denotes |
the |
T11550 |
9465-9475 |
JJ |
denotes |
processive |
T11549 |
9476-9485 |
NN |
denotes |
unwinding |
T11551 |
9486-9488 |
IN |
denotes |
of |
T11552 |
9489-9495 |
NN |
denotes |
duplex |
T11554 |
9496-9499 |
NN |
denotes |
DNA |
T11555 |
9500-9511 |
NN |
denotes |
replication |
T11553 |
9512-9517 |
NNS |
denotes |
forks |
T11556 |
9517-9519 |
, |
denotes |
, |
T11557 |
9519-9523 |
NN |
denotes |
Mcm4 |
T11558 |
9523-9524 |
HYPH |
denotes |
/ |
T11559 |
9524-9525 |
CD |
denotes |
6 |
T11560 |
9525-9526 |
HYPH |
denotes |
/ |
T11561 |
9526-9527 |
CD |
denotes |
7 |
T11562 |
9528-9531 |
MD |
denotes |
may |
T11563 |
9532-9534 |
VB |
denotes |
be |
T11564 |
9535-9542 |
RB |
denotes |
further |
T11547 |
9543-9553 |
VBN |
denotes |
stimulated |
T11565 |
9554-9556 |
IN |
denotes |
by |
T11566 |
9557-9568 |
NN |
denotes |
interaction |
T11567 |
9569-9573 |
IN |
denotes |
with |
T11568 |
9574-9579 |
JJ |
denotes |
other |
T11569 |
9580-9588 |
NN |
denotes |
proteins |
T11570 |
9588-9590 |
, |
denotes |
, |
T11571 |
9590-9599 |
VBG |
denotes |
including |
T11572 |
9600-9609 |
VBG |
denotes |
remaining |
T11574 |
9610-9613 |
NN |
denotes |
Mcm |
T11573 |
9614-9622 |
NNS |
denotes |
subunits |
T11575 |
9622-9624 |
, |
denotes |
, |
T11576 |
9624-9629 |
NN |
denotes |
Cdc45 |
T11577 |
9630-9631 |
-LRB- |
denotes |
( |
T11579 |
9631-9633 |
CD |
denotes |
37 |
T11580 |
9633-9634 |
, |
denotes |
, |
T11578 |
9634-9636 |
CD |
denotes |
38 |
T11581 |
9636-9637 |
-RRB- |
denotes |
) |
T11582 |
9637-9639 |
, |
denotes |
, |
T11583 |
9639-9643 |
NN |
denotes |
GINS |
T11584 |
9644-9645 |
-LRB- |
denotes |
( |
T11586 |
9645-9647 |
CD |
denotes |
41 |
T11587 |
9647-9648 |
, |
denotes |
, |
T11585 |
9648-9650 |
CD |
denotes |
42 |
T11588 |
9650-9651 |
-RRB- |
denotes |
) |
T11589 |
9651-9653 |
, |
denotes |
, |
T11590 |
9653-9656 |
NN |
denotes |
DNA |
T11592 |
9657-9667 |
NN |
denotes |
polymerase |
T11591 |
9668-9676 |
NNS |
denotes |
subunits |
T11593 |
9677-9678 |
-LRB- |
denotes |
( |
T11594 |
9678-9680 |
CD |
denotes |
43 |
T11595 |
9680-9681 |
-RRB- |
denotes |
) |
T11596 |
9681-9683 |
, |
denotes |
, |
T11597 |
9683-9687 |
NN |
denotes |
Mcm8 |
T11598 |
9688-9689 |
-LRB- |
denotes |
( |
T11600 |
9689-9691 |
CD |
denotes |
35 |
T11601 |
9691-9692 |
, |
denotes |
, |
T11599 |
9692-9694 |
CD |
denotes |
36 |
T11602 |
9694-9695 |
-RRB- |
denotes |
) |
T11603 |
9695-9697 |
, |
denotes |
, |
T11604 |
9697-9701 |
FW |
denotes |
etc. |
T11605 |
9702-9704 |
TO |
denotes |
to |
T11606 |
9705-9711 |
VB |
denotes |
become |
T11607 |
9712-9713 |
DT |
denotes |
a |
T11609 |
9714-9719 |
RB |
denotes |
truly |
T11610 |
9720-9730 |
JJ |
denotes |
processive |
T11611 |
9731-9734 |
CC |
denotes |
and |
T11612 |
9735-9741 |
JJ |
denotes |
potent |
T11608 |
9742-9750 |
NN |
denotes |
helicase |
T11613 |
9751-9758 |
JJ |
denotes |
capable |
T11614 |
9759-9761 |
IN |
denotes |
of |
T11615 |
9762-9773 |
VBG |
denotes |
replicating |
T11616 |
9774-9777 |
DT |
denotes |
the |
T11618 |
9778-9784 |
JJ |
denotes |
entire |
T11617 |
9785-9791 |
NN |
denotes |
genome |
T11619 |
9791-9792 |
. |
denotes |
. |
R5896 |
T8790 |
T8791 |
compound |
DNA,helicase |
R5897 |
T8791 |
T8792 |
nsubj |
helicase,is |
R5898 |
T8793 |
T8794 |
det |
a,factor |
R5899 |
T8794 |
T8792 |
attr |
factor,is |
R5900 |
T8795 |
T8794 |
amod |
central,factor |
R5901 |
T8796 |
T8794 |
prep |
for,factor |
R5902 |
T8797 |
T8796 |
pobj |
operation,for |
R5903 |
T8798 |
T8797 |
prep |
of,operation |
R5904 |
T8799 |
T8800 |
compound |
replication,forks |
R5905 |
T8800 |
T8798 |
pobj |
forks,of |
R5906 |
T8801 |
T8792 |
punct |
.,is |
R5907 |
T8803 |
T8804 |
nsubj |
It,plays |
R5908 |
T8805 |
T8804 |
advmod |
also,plays |
R5909 |
T8806 |
T8807 |
det |
a,role |
R5910 |
T8807 |
T8804 |
dobj |
role,plays |
R5911 |
T8808 |
T8807 |
amod |
crucial,role |
R5912 |
T8809 |
T8804 |
prep |
in,plays |
R5913 |
T8810 |
T8811 |
det |
the,step |
R5914 |
T8811 |
T8809 |
pobj |
step,in |
R5915 |
T8812 |
T8811 |
compound |
initiation,step |
R5916 |
T8813 |
T8804 |
prep |
at,plays |
R5917 |
T8814 |
T8815 |
det |
the,origins |
R5918 |
T8815 |
T8813 |
pobj |
origins,at |
R5919 |
T8816 |
T8815 |
compound |
replication,origins |
R5920 |
T8817 |
T8804 |
punct |
.,plays |
R5921 |
T8819 |
T8820 |
advmod |
Therefore,is |
R5922 |
T8821 |
T8820 |
punct |
", ",is |
R5923 |
T8822 |
T8823 |
det |
the,elucidation |
R5924 |
T8823 |
T8820 |
nsubj |
elucidation,is |
R5925 |
T8824 |
T8823 |
prep |
of,elucidation |
R5926 |
T8825 |
T8826 |
advmod |
how,interact |
R5927 |
T8826 |
T8824 |
pobj |
interact,of |
R5928 |
T8827 |
T8828 |
det |
the,helicases |
R5929 |
T8828 |
T8826 |
nsubj |
helicases,interact |
R5930 |
T8829 |
T8828 |
amod |
replicative,helicases |
R5931 |
T8830 |
T8826 |
prep |
with,interact |
R5932 |
T8831 |
T8832 |
compound |
DNA,substrate |
R5933 |
T8832 |
T8830 |
pobj |
substrate,with |
R5934 |
T8833 |
T8826 |
cc |
and,interact |
R5935 |
T8834 |
T8835 |
advmod |
how,activated |
R5936 |
T8835 |
T8826 |
conj |
activated,interact |
R5937 |
T8836 |
T8835 |
nsubjpass |
they,activated |
R5938 |
T8837 |
T8835 |
auxpass |
are,activated |
R5939 |
T8838 |
T8820 |
acomp |
crucial,is |
R5940 |
T8839 |
T8838 |
prep |
for,crucial |
R5941 |
T8840 |
T8839 |
pcomp |
understanding,for |
R5942 |
T8841 |
T8842 |
det |
the,basis |
R5943 |
T8842 |
T8840 |
dobj |
basis,understanding |
R5944 |
T8843 |
T8842 |
amod |
molecular,basis |
R5945 |
T8844 |
T8842 |
prep |
of,basis |
R5946 |
T8845 |
T8844 |
pobj |
initiation,of |
R5947 |
T8846 |
T8845 |
prep |
of,initiation |
R5948 |
T8847 |
T8848 |
compound |
DNA,replication |
R5949 |
T8848 |
T8846 |
pobj |
replication,of |
R5950 |
T8849 |
T8820 |
punct |
.,is |
R5951 |
T8851 |
T8852 |
nsubjpass |
It,believed |
R5952 |
T8853 |
T8852 |
auxpass |
is,believed |
R5953 |
T8854 |
T8852 |
advmod |
now,believed |
R5954 |
T8855 |
T8856 |
mark |
that,is |
R5955 |
T8856 |
T8852 |
ccomp |
is,believed |
R5956 |
T8857 |
T8856 |
nsubj |
Mcm,is |
R5957 |
T8858 |
T8859 |
det |
a,component |
R5958 |
T8859 |
T8856 |
attr |
component,is |
R5959 |
T8860 |
T8859 |
amod |
major,component |
R5960 |
T8861 |
T8859 |
prep |
of,component |
R5961 |
T8862 |
T8863 |
det |
the,helicase |
R5962 |
T8863 |
T8861 |
pobj |
helicase,of |
R5963 |
T8864 |
T8863 |
amod |
eukaryotic,helicase |
R5964 |
T8865 |
T8863 |
amod |
replicative,helicase |
R5965 |
T8866 |
T8852 |
punct |
.,believed |
R5966 |
T8868 |
T8869 |
prep |
In,conducted |
R5967 |
T8870 |
T8871 |
det |
this,report |
R5968 |
T8871 |
T8868 |
pobj |
report,In |
R5969 |
T8872 |
T8869 |
punct |
", ",conducted |
R5970 |
T8873 |
T8869 |
nsubj |
we,conducted |
R5971 |
T8874 |
T8869 |
aux |
have,conducted |
R5972 |
T8875 |
T8876 |
amod |
detailed,analyses |
R5973 |
T8876 |
T8869 |
dobj |
analyses,conducted |
R5974 |
T8877 |
T8876 |
prep |
on,analyses |
R5975 |
T8878 |
T8879 |
nmod |
binding,actions |
R5976 |
T8879 |
T8877 |
pobj |
actions,on |
R5977 |
T8880 |
T8878 |
cc |
and,binding |
R5978 |
T8881 |
T8878 |
conj |
helicase,binding |
R5979 |
T8882 |
T8879 |
prep |
of,actions |
R5980 |
T8883 |
T8884 |
compound |
mouse,Mcm4 |
R5981 |
T8884 |
T8882 |
pobj |
Mcm4,of |
R5982 |
T8885 |
T8884 |
punct |
/,Mcm4 |
R5983 |
T8886 |
T8884 |
nummod |
6,Mcm4 |
R5984 |
T8887 |
T8884 |
punct |
/,Mcm4 |
R5985 |
T8888 |
T8884 |
nummod |
7,Mcm4 |
R5986 |
T8889 |
T8869 |
advcl |
using,conducted |
R5987 |
T8890 |
T8891 |
amod |
various,substrates |
R5988 |
T8891 |
T8889 |
dobj |
substrates,using |
R5989 |
T8892 |
T8891 |
prep |
including,substrates |
R5990 |
T8893 |
T8894 |
nmod |
fork,structures |
R5991 |
T8894 |
T8892 |
pobj |
structures,including |
R5992 |
T8895 |
T8893 |
cc |
and,fork |
R5993 |
T8896 |
T8893 |
conj |
bubble,fork |
R5994 |
T8897 |
T8869 |
punct |
.,conducted |
R5997 |
T9089 |
T9088 |
prep |
of,Modes |
R5998 |
T9090 |
T9089 |
pobj |
binding,of |
R5999 |
T9091 |
T9090 |
cc |
and,binding |
R6000 |
T9092 |
T9090 |
conj |
activation,binding |
R6001 |
T9093 |
T9090 |
prep |
of,binding |
R6002 |
T9094 |
T9095 |
nmod |
Mcm4,helicase |
R6003 |
T9095 |
T9093 |
pobj |
helicase,of |
R6004 |
T9096 |
T9094 |
punct |
/,Mcm4 |
R6005 |
T9097 |
T9094 |
nummod |
6,Mcm4 |
R6006 |
T9098 |
T9094 |
punct |
/,Mcm4 |
R6007 |
T9099 |
T9094 |
nummod |
7,Mcm4 |
R6008 |
T9100 |
T9090 |
prep |
on,binding |
R6009 |
T9101 |
T9102 |
det |
a,structure |
R6010 |
T9102 |
T9100 |
pobj |
structure,on |
R6011 |
T9103 |
T9102 |
compound |
bubble,structure |
R6012 |
T9105 |
T9106 |
nsubjpass |
Initiation,associated |
R6013 |
T9107 |
T9105 |
prep |
of,Initiation |
R6014 |
T9108 |
T9109 |
compound |
DNA,replication |
R6015 |
T9109 |
T9107 |
pobj |
replication,of |
R6016 |
T9110 |
T9106 |
auxpass |
is,associated |
R6017 |
T9111 |
T9106 |
prep |
with,associated |
R6018 |
T9112 |
T9113 |
amod |
localized,melting |
R6019 |
T9113 |
T9111 |
pobj |
melting,with |
R6020 |
T9114 |
T9113 |
prep |
of,melting |
R6021 |
T9115 |
T9116 |
compound |
duplex,DNA |
R6022 |
T9116 |
T9114 |
pobj |
DNA,of |
R6023 |
T9117 |
T9113 |
amod |
near,melting |
R6024 |
T9118 |
T9119 |
compound |
replication,origins |
R6025 |
T9119 |
T9117 |
npadvmod |
origins,near |
R6026 |
T9120 |
T9106 |
punct |
.,associated |
R6027 |
T9122 |
T9123 |
nsubjpass |
Helicases,loaded |
R6028 |
T9124 |
T9123 |
auxpass |
are,loaded |
R6029 |
T9125 |
T9123 |
prep |
onto,loaded |
R6030 |
T9126 |
T9127 |
compound |
replication,forks |
R6031 |
T9127 |
T9125 |
pobj |
forks,onto |
R6032 |
T9128 |
T9123 |
prep |
through,loaded |
R6033 |
T9129 |
T9130 |
det |
the,region |
R6034 |
T9130 |
T9128 |
pobj |
region,through |
R6035 |
T9131 |
T9130 |
amod |
melted,region |
R6036 |
T9132 |
T9130 |
punct |
", ",region |
R6037 |
T9133 |
T9130 |
acl |
induced,region |
R6038 |
T9134 |
T9133 |
prep |
by,induced |
R6039 |
T9135 |
T9136 |
compound |
initiator,binding |
R6040 |
T9136 |
T9134 |
pobj |
binding,by |
R6041 |
T9137 |
T9123 |
punct |
", ",loaded |
R6042 |
T9138 |
T9123 |
prep |
in,loaded |
R6043 |
T9139 |
T9138 |
pobj |
bacteria,in |
R6044 |
T9140 |
T9141 |
punct |
(,32 |
R6045 |
T9141 |
T9123 |
parataxis |
32,loaded |
R6046 |
T9142 |
T9141 |
punct |
),32 |
R6047 |
T9143 |
T9123 |
punct |
.,loaded |
R6048 |
T9145 |
T9146 |
nsubj |
We,reported |
R6049 |
T9147 |
T9146 |
advmod |
previously,reported |
R6050 |
T9148 |
T9149 |
mark |
that,loaded |
R6051 |
T9149 |
T9146 |
ccomp |
loaded,reported |
R6052 |
T9150 |
T9149 |
nsubjpass |
Mcm4,loaded |
R6053 |
T9151 |
T9150 |
punct |
/,Mcm4 |
R6054 |
T9152 |
T9150 |
nummod |
6,Mcm4 |
R6055 |
T9153 |
T9150 |
punct |
/,Mcm4 |
R6056 |
T9154 |
T9150 |
nummod |
7,Mcm4 |
R6057 |
T9155 |
T9149 |
aux |
can,loaded |
R6058 |
T9156 |
T9149 |
auxpass |
be,loaded |
R6059 |
T9157 |
T9149 |
prep |
onto,loaded |
R6060 |
T9158 |
T9159 |
det |
a,structure |
R6061 |
T9159 |
T9157 |
pobj |
structure,onto |
R6062 |
T9160 |
T9161 |
npadvmod |
bubble,like |
R6063 |
T9161 |
T9159 |
amod |
like,structure |
R6064 |
T9162 |
T9161 |
punct |
-,like |
R6065 |
T9163 |
T9146 |
cc |
and,reported |
R6066 |
T9164 |
T9165 |
aux |
can,serve |
R6067 |
T9165 |
T9146 |
conj |
serve,reported |
R6068 |
T9166 |
T9165 |
prep |
as,serve |
R6069 |
T9167 |
T9168 |
det |
a,helicase |
R6070 |
T9168 |
T9166 |
pobj |
helicase,as |
R6071 |
T9169 |
T9168 |
compound |
DNA,helicase |
R6072 |
T9170 |
T9165 |
prep |
at,serve |
R6073 |
T9171 |
T9172 |
det |
the,forks |
R6074 |
T9172 |
T9170 |
pobj |
forks,at |
R6075 |
T9173 |
T9174 |
punct |
(,13 |
R6076 |
T9174 |
T9165 |
parataxis |
13,serve |
R6077 |
T9175 |
T9174 |
punct |
),13 |
R6078 |
T9176 |
T9146 |
punct |
.,reported |
R6079 |
T9178 |
T9179 |
det |
The,ability |
R6080 |
T9179 |
T9180 |
nsubj |
ability,indicates |
R6081 |
T9181 |
T9179 |
prep |
of,ability |
R6082 |
T9182 |
T9181 |
pobj |
Mcm4,of |
R6083 |
T9183 |
T9182 |
punct |
/,Mcm4 |
R6084 |
T9184 |
T9182 |
nummod |
6,Mcm4 |
R6085 |
T9185 |
T9182 |
punct |
/,Mcm4 |
R6086 |
T9186 |
T9182 |
nummod |
7,Mcm4 |
R6087 |
T9187 |
T9188 |
aux |
to,unwind |
R6088 |
T9188 |
T9179 |
acl |
unwind,ability |
R6089 |
T9189 |
T9190 |
det |
the,substrate |
R6090 |
T9190 |
T9188 |
dobj |
substrate,unwind |
R6091 |
T9191 |
T9190 |
compound |
bubble,substrate |
R6092 |
T9192 |
T9190 |
cc |
but,substrate |
R6093 |
T9193 |
T9192 |
neg |
not,but |
R6094 |
T9194 |
T9195 |
det |
the,DNA |
R6095 |
T9195 |
T9190 |
conj |
DNA,substrate |
R6096 |
T9196 |
T9195 |
amod |
conventional,DNA |
R6097 |
T9197 |
T9195 |
compound |
duplex,DNA |
R6098 |
T9198 |
T9199 |
punct |
(,2 |
R6099 |
T9199 |
T9188 |
parataxis |
2,unwind |
R6100 |
T9200 |
T9199 |
nmod |
Figures,2 |
R6101 |
T9201 |
T9199 |
cc |
and,2 |
R6102 |
T9202 |
T9199 |
conj |
13,2 |
R6103 |
T9203 |
T9199 |
punct |
),2 |
R6104 |
T9204 |
T9205 |
mark |
that,loaded |
R6105 |
T9205 |
T9180 |
ccomp |
loaded,indicates |
R6106 |
T9206 |
T9205 |
nsubjpass |
Mcm,loaded |
R6107 |
T9207 |
T9205 |
aux |
can,loaded |
R6108 |
T9208 |
T9205 |
auxpass |
be,loaded |
R6109 |
T9209 |
T9205 |
prep |
through,loaded |
R6110 |
T9210 |
T9211 |
det |
the,segment |
R6111 |
T9211 |
T9209 |
pobj |
segment,through |
R6112 |
T9212 |
T9213 |
amod |
single,stranded |
R6113 |
T9213 |
T9211 |
amod |
stranded,segment |
R6114 |
T9214 |
T9213 |
punct |
-,stranded |
R6115 |
T9215 |
T9211 |
prep |
of,segment |
R6116 |
T9216 |
T9217 |
det |
the,bubble |
R6117 |
T9217 |
T9215 |
pobj |
bubble,of |
R6118 |
T9218 |
T9180 |
punct |
.,indicates |
R6119 |
T9220 |
T9221 |
advmod |
Furthermore,displays |
R6120 |
T9222 |
T9221 |
punct |
", ",displays |
R6121 |
T9223 |
T9224 |
det |
the,complex |
R6122 |
T9224 |
T9221 |
nsubj |
complex,displays |
R6123 |
T9225 |
T9224 |
nmod |
Mcm4,complex |
R6124 |
T9226 |
T9225 |
punct |
/,Mcm4 |
R6125 |
T9227 |
T9225 |
nummod |
6,Mcm4 |
R6126 |
T9228 |
T9225 |
punct |
/,Mcm4 |
R6127 |
T9229 |
T9225 |
nummod |
7,Mcm4 |
R6128 |
T9230 |
T9231 |
amod |
marked,preference |
R6129 |
T9231 |
T9221 |
dobj |
preference,displays |
R6130 |
T9232 |
T9231 |
prep |
for,preference |
R6131 |
T9233 |
T9234 |
npadvmod |
thymine,rich |
R6132 |
T9234 |
T9236 |
amod |
rich,sequences |
R6133 |
T9235 |
T9234 |
punct |
-,rich |
R6134 |
T9236 |
T9232 |
pobj |
sequences,for |
R6135 |
T9237 |
T9221 |
prep |
within,displays |
R6136 |
T9238 |
T9239 |
det |
the,segment |
R6137 |
T9239 |
T9237 |
pobj |
segment,within |
R6138 |
T9240 |
T9241 |
amod |
single,stranded |
R6139 |
T9241 |
T9239 |
amod |
stranded,segment |
R6140 |
T9242 |
T9241 |
punct |
-,stranded |
R6141 |
T9243 |
T9239 |
prep |
for,segment |
R6142 |
T9244 |
T9245 |
compound |
helicase,activation |
R6143 |
T9245 |
T9243 |
pobj |
activation,for |
R6144 |
T9246 |
T9247 |
punct |
(,13 |
R6145 |
T9247 |
T9221 |
parataxis |
13,displays |
R6146 |
T9248 |
T9247 |
punct |
),13 |
R6147 |
T9249 |
T9221 |
punct |
.,displays |
R6148 |
T9251 |
T9252 |
det |
The,results |
R6149 |
T9252 |
T9253 |
nsubj |
results,indicate |
R6150 |
T9254 |
T9252 |
prep |
in,results |
R6151 |
T9255 |
T9256 |
det |
this,report |
R6152 |
T9256 |
T9254 |
pobj |
report,in |
R6153 |
T9257 |
T9258 |
mark |
that,depend |
R6154 |
T9258 |
T9253 |
ccomp |
depend,indicate |
R6155 |
T9259 |
T9260 |
compound |
helicase,action |
R6156 |
T9260 |
T9258 |
nsubj |
action,depend |
R6157 |
T9261 |
T9260 |
prep |
of,action |
R6158 |
T9262 |
T9261 |
pobj |
Mcm4,of |
R6159 |
T9263 |
T9262 |
punct |
/,Mcm4 |
R6160 |
T9264 |
T9262 |
nummod |
6,Mcm4 |
R6161 |
T9265 |
T9262 |
punct |
/,Mcm4 |
R6162 |
T9266 |
T9262 |
nummod |
7,Mcm4 |
R6163 |
T9267 |
T9260 |
prep |
on,action |
R6164 |
T9268 |
T9269 |
amod |
synthetic,bubbles |
R6165 |
T9269 |
T9267 |
pobj |
bubbles,on |
R6166 |
T9270 |
T9258 |
aux |
may,depend |
R6167 |
T9271 |
T9258 |
prep |
on,depend |
R6168 |
T9272 |
T9273 |
det |
the,presence |
R6169 |
T9273 |
T9271 |
pobj |
presence,on |
R6170 |
T9274 |
T9273 |
prep |
of,presence |
R6171 |
T9275 |
T9276 |
det |
an,region |
R6172 |
T9276 |
T9274 |
pobj |
region,of |
R6173 |
T9277 |
T9276 |
amod |
unpaired,region |
R6174 |
T9278 |
T9276 |
prep |
of,region |
R6175 |
T9279 |
T9280 |
amod |
sufficient,length |
R6176 |
T9280 |
T9278 |
pobj |
length,of |
R6177 |
T9281 |
T9282 |
punct |
(,nt |
R6178 |
T9282 |
T9280 |
parataxis |
nt,length |
R6179 |
T9283 |
T9284 |
advmod |
at,least |
R6180 |
T9284 |
T9285 |
advmod |
least,40 |
R6181 |
T9285 |
T9282 |
nummod |
40,nt |
R6182 |
T9286 |
T9282 |
punct |
),nt |
R6183 |
T9287 |
T9276 |
punct |
", ",region |
R6184 |
T9288 |
T9289 |
dep |
which,permit |
R6185 |
T9289 |
T9276 |
relcl |
permit,region |
R6186 |
T9290 |
T9289 |
aux |
may,permit |
R6187 |
T9291 |
T9289 |
dobj |
assembly,permit |
R6188 |
T9292 |
T9291 |
prep |
of,assembly |
R6189 |
T9293 |
T9294 |
det |
a,complex |
R6190 |
T9294 |
T9292 |
pobj |
complex,of |
R6191 |
T9295 |
T9296 |
amod |
double,hexameric |
R6192 |
T9296 |
T9294 |
amod |
hexameric,complex |
R6193 |
T9297 |
T9296 |
punct |
-,hexameric |
R6194 |
T9298 |
T9294 |
prep |
on,complex |
R6195 |
T9299 |
T9300 |
det |
the,DNA |
R6196 |
T9300 |
T9298 |
pobj |
DNA,on |
R6197 |
T9301 |
T9300 |
compound |
substrate,DNA |
R6198 |
T9302 |
T9294 |
punct |
", ",complex |
R6199 |
T9303 |
T9294 |
amod |
similar,complex |
R6200 |
T9304 |
T9303 |
prep |
to,similar |
R6201 |
T9305 |
T9306 |
compound |
SV40,protein |
R6202 |
T9306 |
T9304 |
pobj |
protein,to |
R6203 |
T9307 |
T9308 |
compound |
T,antigen |
R6204 |
T9308 |
T9306 |
compound |
antigen,protein |
R6205 |
T9309 |
T9308 |
punct |
-,antigen |
R6206 |
T9310 |
T9311 |
punct |
(,2A |
R6207 |
T9311 |
T9304 |
parataxis |
2A,to |
R6208 |
T9312 |
T9311 |
compound |
Figure,2A |
R6209 |
T9313 |
T9311 |
punct |
),2A |
R6210 |
T9314 |
T9315 |
punct |
(,21 |
R6211 |
T9315 |
T9289 |
parataxis |
21,permit |
R6212 |
T9316 |
T9315 |
punct |
),21 |
R6213 |
T9317 |
T9253 |
punct |
.,indicate |
R6214 |
T9319 |
T9320 |
advmod |
When,replaced |
R6215 |
T9320 |
T9335 |
advcl |
replaced,reduced |
R6216 |
T9321 |
T9322 |
nummod |
one,strand |
R6217 |
T9322 |
T9320 |
nsubjpass |
strand,replaced |
R6218 |
T9323 |
T9322 |
prep |
of,strand |
R6219 |
T9324 |
T9325 |
det |
the,segment |
R6220 |
T9325 |
T9323 |
pobj |
segment,of |
R6221 |
T9326 |
T9327 |
amod |
single,stranded |
R6222 |
T9327 |
T9325 |
amod |
stranded,segment |
R6223 |
T9328 |
T9327 |
punct |
-,stranded |
R6224 |
T9329 |
T9322 |
prep |
in,strand |
R6225 |
T9330 |
T9331 |
npadvmod |
T,rich |
R6226 |
T9331 |
T9333 |
amod |
rich,bubble |
R6227 |
T9332 |
T9331 |
punct |
-,rich |
R6228 |
T9333 |
T9329 |
pobj |
bubble,in |
R6229 |
T9334 |
T9320 |
auxpass |
was,replaced |
R6230 |
T9336 |
T9320 |
agent |
by,replaced |
R6231 |
T9337 |
T9338 |
npadvmod |
guanine,rich |
R6232 |
T9338 |
T9340 |
amod |
rich,sequences |
R6233 |
T9339 |
T9338 |
punct |
-,rich |
R6234 |
T9340 |
T9336 |
pobj |
sequences,by |
R6235 |
T9341 |
T9335 |
punct |
", ",reduced |
R6236 |
T9342 |
T9343 |
det |
the,efficiency |
R6237 |
T9343 |
T9335 |
nsubjpass |
efficiency,reduced |
R6238 |
T9344 |
T9343 |
prep |
of,efficiency |
R6239 |
T9345 |
T9344 |
pobj |
unwinding,of |
R6240 |
T9346 |
T9335 |
auxpass |
was,reduced |
R6241 |
T9347 |
T9335 |
advmod |
significantly,reduced |
R6242 |
T9348 |
T9335 |
punct |
.,reduced |
R6243 |
T9350 |
T9351 |
poss |
Our,analyses |
R6244 |
T9351 |
T9353 |
nsubj |
analyses,showed |
R6245 |
T9352 |
T9351 |
compound |
footprinting,analyses |
R6246 |
T9354 |
T9355 |
mark |
that,protects |
R6247 |
T9355 |
T9353 |
ccomp |
protects,showed |
R6248 |
T9356 |
T9355 |
nsubj |
Mcm4,protects |
R6249 |
T9357 |
T9356 |
punct |
/,Mcm4 |
R6250 |
T9358 |
T9356 |
nummod |
6,Mcm4 |
R6251 |
T9359 |
T9356 |
punct |
/,Mcm4 |
R6252 |
T9360 |
T9356 |
nummod |
7,Mcm4 |
R6253 |
T9361 |
T9355 |
advmod |
strongly,protects |
R6254 |
T9362 |
T9363 |
nummod |
25,nt |
R6255 |
T9363 |
T9364 |
nmod |
nt,segment |
R6256 |
T9364 |
T9355 |
dobj |
segment,protects |
R6257 |
T9365 |
T9366 |
amod |
single,stranded |
R6258 |
T9366 |
T9364 |
amod |
stranded,segment |
R6259 |
T9367 |
T9366 |
punct |
-,stranded |
R6260 |
T9368 |
T9364 |
compound |
DNA,segment |
R6261 |
T9369 |
T9364 |
amod |
adjacent,segment |
R6262 |
T9370 |
T9369 |
prep |
to,adjacent |
R6263 |
T9371 |
T9372 |
det |
each,point |
R6264 |
T9372 |
T9370 |
pobj |
point,to |
R6265 |
T9373 |
T9372 |
compound |
branch,point |
R6266 |
T9374 |
T9369 |
cc |
and,adjacent |
R6267 |
T9375 |
T9369 |
conj |
proximal,adjacent |
R6268 |
T9376 |
T9375 |
prep |
to,proximal |
R6269 |
T9377 |
T9378 |
nummod |
5,ends |
R6270 |
T9378 |
T9376 |
pobj |
ends,to |
R6271 |
T9379 |
T9377 |
punct |
′,5 |
R6272 |
T9380 |
T9378 |
prep |
of,ends |
R6273 |
T9381 |
T9382 |
det |
both,strands |
R6274 |
T9382 |
T9380 |
pobj |
strands,of |
R6275 |
T9383 |
T9382 |
prep |
of,strands |
R6276 |
T9384 |
T9385 |
det |
the,bubble |
R6277 |
T9385 |
T9383 |
pobj |
bubble,of |
R6278 |
T9386 |
T9353 |
punct |
.,showed |
R6279 |
T9388 |
T9389 |
prep |
At,is |
R6280 |
T9390 |
T9391 |
det |
each,fork |
R6281 |
T9391 |
T9388 |
pobj |
fork,At |
R6282 |
T9392 |
T9389 |
punct |
", ",is |
R6283 |
T9393 |
T9394 |
nummod |
one,complex |
R6284 |
T9394 |
T9389 |
nsubj |
complex,is |
R6285 |
T9395 |
T9394 |
nmod |
Mcm4,complex |
R6286 |
T9396 |
T9395 |
punct |
/,Mcm4 |
R6287 |
T9397 |
T9395 |
nummod |
6,Mcm4 |
R6288 |
T9398 |
T9395 |
punct |
/,Mcm4 |
R6289 |
T9399 |
T9395 |
nummod |
7,Mcm4 |
R6290 |
T9400 |
T9389 |
acomp |
likely,is |
R6291 |
T9401 |
T9402 |
aux |
to,encircle |
R6292 |
T9402 |
T9400 |
xcomp |
encircle,likely |
R6293 |
T9403 |
T9404 |
det |
the,strand |
R6294 |
T9404 |
T9402 |
dobj |
strand,encircle |
R6295 |
T9405 |
T9406 |
amod |
single,stranded |
R6296 |
T9406 |
T9404 |
amod |
stranded,strand |
R6297 |
T9407 |
T9406 |
punct |
-,stranded |
R6298 |
T9408 |
T9404 |
compound |
DNA,strand |
R6299 |
T9409 |
T9389 |
cc |
and,is |
R6300 |
T9410 |
T9411 |
nummod |
two,hexamers |
R6301 |
T9411 |
T9412 |
nsubj |
hexamers,bind |
R6302 |
T9412 |
T9389 |
conj |
bind,is |
R6303 |
T9413 |
T9412 |
aux |
may,bind |
R6304 |
T9414 |
T9412 |
advmod |
symmetrically,bind |
R6305 |
T9415 |
T9412 |
prep |
to,bind |
R6306 |
T9416 |
T9417 |
det |
the,substrate |
R6307 |
T9417 |
T9415 |
pobj |
substrate,to |
R6308 |
T9418 |
T9417 |
compound |
bubble,substrate |
R6309 |
T9419 |
T9412 |
punct |
", ",bind |
R6310 |
T9420 |
T9412 |
advcl |
forming,bind |
R6311 |
T9421 |
T9422 |
det |
a,structure |
R6312 |
T9422 |
T9420 |
dobj |
structure,forming |
R6313 |
T9423 |
T9424 |
amod |
double,hexameric |
R6314 |
T9424 |
T9422 |
amod |
hexameric,structure |
R6315 |
T9425 |
T9420 |
prep |
on,forming |
R6316 |
T9426 |
T9427 |
det |
the,bubble |
R6317 |
T9427 |
T9425 |
pobj |
bubble,on |
R6318 |
T9428 |
T9429 |
punct |
(,see |
R6319 |
T9429 |
T9420 |
parataxis |
see,forming |
R6320 |
T9430 |
T9431 |
amod |
schematic,drawing |
R6321 |
T9431 |
T9429 |
dobj |
drawing,see |
R6322 |
T9432 |
T9431 |
prep |
of,drawing |
R6323 |
T9433 |
T9434 |
compound |
Figure,1A |
R6324 |
T9434 |
T9432 |
pobj |
1A,of |
R6325 |
T9435 |
T9429 |
punct |
),see |
R6326 |
T9436 |
T9412 |
punct |
.,bind |
R6327 |
T9438 |
T9439 |
amod |
Efficient,unwinding |
R6328 |
T9439 |
T9440 |
nsubj |
unwinding,require |
R6329 |
T9441 |
T9439 |
prep |
into,unwinding |
R6330 |
T9442 |
T9443 |
det |
both,directions |
R6331 |
T9443 |
T9441 |
pobj |
directions,into |
R6332 |
T9444 |
T9440 |
aux |
may,require |
R6333 |
T9445 |
T9446 |
amod |
simultaneous,activation |
R6334 |
T9446 |
T9440 |
dobj |
activation,require |
R6335 |
T9447 |
T9446 |
prep |
of,activation |
R6336 |
T9448 |
T9449 |
det |
both,hexamers |
R6337 |
T9449 |
T9447 |
pobj |
hexamers,of |
R6338 |
T9450 |
T9451 |
dep |
which,sit |
R6339 |
T9451 |
T9449 |
relcl |
sit,hexamers |
R6340 |
T9452 |
T9451 |
aux |
may,sit |
R6341 |
T9453 |
T9451 |
prep |
at,sit |
R6342 |
T9454 |
T9455 |
det |
the,center |
R6343 |
T9455 |
T9453 |
pobj |
center,at |
R6344 |
T9456 |
T9457 |
mark |
while,extruding |
R6345 |
T9457 |
T9451 |
advcl |
extruding,sit |
R6346 |
T9458 |
T9459 |
det |
the,DNA |
R6347 |
T9459 |
T9457 |
dobj |
DNA,extruding |
R6348 |
T9460 |
T9459 |
amod |
unwound,DNA |
R6349 |
T9461 |
T9462 |
amod |
single,stranded |
R6350 |
T9462 |
T9459 |
amod |
stranded,DNA |
R6351 |
T9463 |
T9462 |
punct |
-,stranded |
R6352 |
T9464 |
T9457 |
prep |
through,extruding |
R6353 |
T9465 |
T9466 |
det |
the,rings |
R6354 |
T9466 |
T9464 |
pobj |
rings,through |
R6355 |
T9467 |
T9440 |
punct |
.,require |
R6356 |
T9469 |
T9470 |
nsubj |
This,resemble |
R6357 |
T9471 |
T9470 |
aux |
may,resemble |
R6358 |
T9472 |
T9470 |
advmod |
closely,resemble |
R6359 |
T9473 |
T9474 |
det |
the,modes |
R6360 |
T9474 |
T9470 |
dobj |
modes,resemble |
R6361 |
T9475 |
T9474 |
amod |
proposed,modes |
R6362 |
T9476 |
T9474 |
prep |
of,modes |
R6363 |
T9477 |
T9478 |
nmod |
binding,actions |
R6364 |
T9478 |
T9476 |
pobj |
actions,of |
R6365 |
T9479 |
T9477 |
cc |
and,binding |
R6366 |
T9480 |
T9477 |
conj |
helicase,binding |
R6367 |
T9481 |
T9478 |
prep |
of,actions |
R6368 |
T9482 |
T9483 |
compound |
T,antigen |
R6369 |
T9483 |
T9481 |
pobj |
antigen,of |
R6370 |
T9484 |
T9483 |
punct |
-,antigen |
R6371 |
T9485 |
T9486 |
punct |
(,21 |
R6372 |
T9486 |
T9470 |
parataxis |
21,resemble |
R6373 |
T9487 |
T9486 |
punct |
),21 |
R6374 |
T9488 |
T9470 |
punct |
.,resemble |
R6375 |
T9490 |
T9491 |
mark |
Although,exclude |
R6376 |
T9491 |
T9496 |
advcl |
exclude,bear |
R6377 |
T9492 |
T9491 |
nsubj |
we,exclude |
R6378 |
T9493 |
T9491 |
aux |
can,exclude |
R6379 |
T9494 |
T9491 |
neg |
not,exclude |
R6380 |
T9495 |
T9491 |
advmod |
totally,exclude |
R6381 |
T9497 |
T9498 |
det |
the,possibility |
R6382 |
T9498 |
T9491 |
dobj |
possibility,exclude |
R6383 |
T9499 |
T9500 |
mark |
that,unwinds |
R6384 |
T9500 |
T9498 |
acl |
unwinds,possibility |
R6385 |
T9501 |
T9502 |
nummod |
one,hexamer |
R6386 |
T9502 |
T9500 |
nsubj |
hexamer,unwinds |
R6387 |
T9503 |
T9502 |
nmod |
Mcm4,hexamer |
R6388 |
T9504 |
T9503 |
punct |
/,Mcm4 |
R6389 |
T9505 |
T9503 |
nummod |
6,Mcm4 |
R6390 |
T9506 |
T9503 |
punct |
/,Mcm4 |
R6391 |
T9507 |
T9503 |
nummod |
7,Mcm4 |
R6392 |
T9508 |
T9502 |
prep |
at,hexamer |
R6393 |
T9509 |
T9510 |
det |
each,fork |
R6394 |
T9510 |
T9508 |
pobj |
fork,at |
R6395 |
T9511 |
T9512 |
det |
the,duplex |
R6396 |
T9512 |
T9500 |
dobj |
duplex,unwinds |
R6397 |
T9513 |
T9500 |
advmod |
independently,unwinds |
R6398 |
T9514 |
T9496 |
punct |
", ",bear |
R6399 |
T9515 |
T9516 |
npadvmod |
ring,shaped |
R6400 |
T9516 |
T9518 |
amod |
shaped,structures |
R6401 |
T9517 |
T9516 |
punct |
-,shaped |
R6402 |
T9518 |
T9496 |
nsubj |
structures,bear |
R6403 |
T9519 |
T9518 |
prep |
of,structures |
R6404 |
T9520 |
T9521 |
nmod |
mouse,MCM |
R6405 |
T9521 |
T9519 |
pobj |
MCM,of |
R6406 |
T9522 |
T9520 |
cc |
and,mouse |
R6407 |
T9523 |
T9520 |
conj |
archea,mouse |
R6408 |
T9524 |
T9496 |
punct |
", ",bear |
R6409 |
T9525 |
T9526 |
mark |
as,revealed |
R6410 |
T9526 |
T9496 |
advcl |
revealed,bear |
R6411 |
T9527 |
T9526 |
agent |
by,revealed |
R6412 |
T9528 |
T9529 |
compound |
electron,microscopy |
R6413 |
T9529 |
T9527 |
pobj |
microscopy,by |
R6414 |
T9530 |
T9496 |
punct |
", ",bear |
R6415 |
T9531 |
T9532 |
amod |
much,similarity |
R6416 |
T9532 |
T9496 |
dobj |
similarity,bear |
R6417 |
T9533 |
T9532 |
prep |
to,similarity |
R6418 |
T9534 |
T9535 |
det |
the,structure |
R6419 |
T9535 |
T9533 |
pobj |
structure,to |
R6420 |
T9536 |
T9537 |
advmod |
recently,solved |
R6421 |
T9537 |
T9535 |
amod |
solved,structure |
R6422 |
T9538 |
T9535 |
prep |
of,structure |
R6423 |
T9539 |
T9540 |
det |
the,antigen |
R6424 |
T9540 |
T9538 |
pobj |
antigen,of |
R6425 |
T9541 |
T9540 |
nmod |
SV40,antigen |
R6426 |
T9542 |
T9540 |
amod |
large,antigen |
R6427 |
T9543 |
T9540 |
compound |
T,antigen |
R6428 |
T9544 |
T9540 |
punct |
-,antigen |
R6429 |
T9545 |
T9546 |
punct |
(,6 |
R6430 |
T9546 |
T9535 |
parataxis |
6,structure |
R6431 |
T9547 |
T9546 |
nummod |
4,6 |
R6432 |
T9548 |
T9546 |
punct |
",",6 |
R6433 |
T9549 |
T9546 |
punct |
),6 |
R6434 |
T9550 |
T9496 |
punct |
", ",bear |
R6435 |
T9551 |
T9496 |
cc |
and,bear |
R6436 |
T9552 |
T9496 |
conj |
are,bear |
R6437 |
T9553 |
T9552 |
prep |
in,are |
R6438 |
T9554 |
T9553 |
pobj |
favor,in |
R6439 |
T9555 |
T9554 |
prep |
of,favor |
R6440 |
T9556 |
T9557 |
det |
the,structure |
R6441 |
T9557 |
T9555 |
pobj |
structure,of |
R6442 |
T9558 |
T9559 |
amod |
double,hexameric |
R6443 |
T9559 |
T9557 |
amod |
hexameric,structure |
R6444 |
T9560 |
T9559 |
punct |
-,hexameric |
R6445 |
T9561 |
T9557 |
prep |
of,structure |
R6446 |
T9562 |
T9563 |
compound |
mouse,Mcm |
R6447 |
T9563 |
T9561 |
pobj |
Mcm,of |
R6448 |
T9564 |
T9557 |
prep |
on,structure |
R6449 |
T9565 |
T9566 |
det |
a,DNA |
R6450 |
T9566 |
T9564 |
pobj |
DNA,on |
R6451 |
T9567 |
T9566 |
compound |
bubble,DNA |
R6452 |
T9568 |
T9496 |
punct |
.,bear |
R6455 |
T9856 |
T9857 |
nmod |
Substrate,requirement |
R6456 |
T9858 |
T9856 |
cc |
and,Substrate |
R6457 |
T9859 |
T9856 |
conj |
sequence,Substrate |
R6458 |
T9860 |
T9857 |
prep |
for,requirement |
R6459 |
T9861 |
T9862 |
nmod |
Mcm4,activation |
R6460 |
T9862 |
T9860 |
pobj |
activation,for |
R6461 |
T9863 |
T9861 |
punct |
/,Mcm4 |
R6462 |
T9864 |
T9861 |
nummod |
6,Mcm4 |
R6463 |
T9865 |
T9861 |
punct |
/,Mcm4 |
R6464 |
T9866 |
T9861 |
nummod |
7,Mcm4 |
R6465 |
T9867 |
T9862 |
compound |
helicase,activation |
R6466 |
T9869 |
T9870 |
compound |
DNA,binding |
R6467 |
T9870 |
T9871 |
compound |
binding,assays |
R6468 |
T9871 |
T9872 |
nsubj |
assays,indicate |
R6469 |
T9873 |
T9874 |
mark |
that,binds |
R6470 |
T9874 |
T9872 |
ccomp |
binds,indicate |
R6471 |
T9875 |
T9874 |
nsubj |
Mcm4,binds |
R6472 |
T9876 |
T9875 |
punct |
/,Mcm4 |
R6473 |
T9877 |
T9875 |
nummod |
6,Mcm4 |
R6474 |
T9878 |
T9875 |
punct |
/,Mcm4 |
R6475 |
T9879 |
T9875 |
nummod |
7,Mcm4 |
R6476 |
T9880 |
T9874 |
prep |
to,binds |
R6477 |
T9881 |
T9882 |
det |
those,substrates |
R6478 |
T9882 |
T9880 |
pobj |
substrates,to |
R6479 |
T9883 |
T9882 |
acl |
containing,substrates |
R6480 |
T9884 |
T9885 |
amod |
single,stranded |
R6481 |
T9885 |
T9887 |
amod |
stranded,regions |
R6482 |
T9886 |
T9885 |
punct |
-,stranded |
R6483 |
T9887 |
T9883 |
dobj |
regions,containing |
R6484 |
T9888 |
T9887 |
compound |
DNA,regions |
R6485 |
T9889 |
T9874 |
advmod |
regardless,binds |
R6486 |
T9890 |
T9889 |
prep |
of,regardless |
R6487 |
T9891 |
T9892 |
det |
the,presence |
R6488 |
T9892 |
T9890 |
pobj |
presence,of |
R6489 |
T9893 |
T9892 |
cc |
or,presence |
R6490 |
T9894 |
T9892 |
conj |
absence,presence |
R6491 |
T9895 |
T9892 |
prep |
of,presence |
R6492 |
T9896 |
T9897 |
amod |
single,stranded |
R6493 |
T9897 |
T9899 |
amod |
stranded,end |
R6494 |
T9898 |
T9897 |
punct |
-,stranded |
R6495 |
T9899 |
T9895 |
pobj |
end,of |
R6496 |
T9900 |
T9899 |
nummod |
3,end |
R6497 |
T9901 |
T9900 |
punct |
′,3 |
R6498 |
T9902 |
T9900 |
cc |
or,3 |
R6499 |
T9903 |
T9900 |
conj |
5,3 |
R6500 |
T9904 |
T9903 |
punct |
′,5 |
R6501 |
T9905 |
T9872 |
punct |
.,indicate |
R6502 |
T9907 |
T9908 |
nsubj |
Unwinding,depends |
R6503 |
T9909 |
T9907 |
prep |
of,Unwinding |
R6504 |
T9910 |
T9911 |
det |
the,DNA |
R6505 |
T9911 |
T9909 |
pobj |
DNA,of |
R6506 |
T9912 |
T9911 |
compound |
duplex,DNA |
R6507 |
T9913 |
T9908 |
prep |
on,depends |
R6508 |
T9914 |
T9913 |
pobj |
translocation,on |
R6509 |
T9915 |
T9914 |
prep |
of,translocation |
R6510 |
T9916 |
T9917 |
amod |
single,stranded |
R6511 |
T9917 |
T9919 |
amod |
stranded,DNA |
R6512 |
T9918 |
T9917 |
punct |
-,stranded |
R6513 |
T9919 |
T9915 |
pobj |
DNA,of |
R6514 |
T9920 |
T9914 |
prep |
from,translocation |
R6515 |
T9921 |
T9920 |
pobj |
3,from |
R6516 |
T9922 |
T9921 |
punct |
′,3 |
R6517 |
T9923 |
T9920 |
prep |
to,from |
R6518 |
T9924 |
T9923 |
pobj |
5,to |
R6519 |
T9925 |
T9924 |
punct |
′,5 |
R6520 |
T9926 |
T9920 |
pobj |
direction,from |
R6521 |
T9927 |
T9908 |
punct |
.,depends |
R6522 |
T9929 |
T9930 |
nsubjpass |
This,shown |
R6523 |
T9931 |
T9930 |
auxpass |
is,shown |
R6524 |
T9932 |
T9933 |
advmod |
most,clearly |
R6525 |
T9933 |
T9930 |
advmod |
clearly,shown |
R6526 |
T9934 |
T9930 |
prep |
by,shown |
R6527 |
T9935 |
T9936 |
poss |
its,action |
R6528 |
T9936 |
T9934 |
pobj |
action,by |
R6529 |
T9937 |
T9936 |
compound |
helicase,action |
R6530 |
T9938 |
T9936 |
prep |
on,action |
R6531 |
T9939 |
T9940 |
nmod |
A,fork |
R6532 |
T9940 |
T9942 |
nmod |
fork,extension |
R6533 |
T9941 |
T9940 |
punct |
-,fork |
R6534 |
T9942 |
T9938 |
pobj |
extension,on |
R6535 |
T9943 |
T9940 |
punct |
[,fork |
R6536 |
T9944 |
T9940 |
appos |
5,fork |
R6537 |
T9945 |
T9944 |
punct |
′,5 |
R6538 |
T9946 |
T9944 |
punct |
],5 |
R6539 |
T9947 |
T9944 |
cc |
and,5 |
R6540 |
T9948 |
T9944 |
conj |
3,5 |
R6541 |
T9949 |
T9948 |
punct |
′,3 |
R6542 |
T9950 |
T9942 |
punct |
-,extension |
R6543 |
T9951 |
T9938 |
cc |
but,on |
R6544 |
T9952 |
T9951 |
neg |
not,but |
R6545 |
T9953 |
T9938 |
conj |
on,on |
R6546 |
T9954 |
T9955 |
nmod |
A,fork |
R6547 |
T9955 |
T9957 |
nmod |
fork,extension |
R6548 |
T9956 |
T9955 |
punct |
-,fork |
R6549 |
T9957 |
T9953 |
pobj |
extension,on |
R6550 |
T9958 |
T9955 |
punct |
[,fork |
R6551 |
T9959 |
T9955 |
nummod |
3,fork |
R6552 |
T9960 |
T9955 |
punct |
′,fork |
R6553 |
T9961 |
T9955 |
punct |
],fork |
R6554 |
T9962 |
T9955 |
punct |
", ",fork |
R6555 |
T9963 |
T9964 |
compound |
A,fork |
R6556 |
T9964 |
T9955 |
conj |
fork,fork |
R6557 |
T9965 |
T9964 |
punct |
-,fork |
R6558 |
T9966 |
T9964 |
punct |
[,fork |
R6559 |
T9967 |
T9964 |
appos |
3,fork |
R6560 |
T9968 |
T9967 |
punct |
′,3 |
R6561 |
T9969 |
T9967 |
punct |
",",3 |
R6562 |
T9970 |
T9967 |
appos |
5,3 |
R6563 |
T9971 |
T9970 |
punct |
′,5 |
R6564 |
T9972 |
T9964 |
punct |
],fork |
R6565 |
T9973 |
T9964 |
cc |
nor,fork |
R6566 |
T9974 |
T9964 |
conj |
5,fork |
R6567 |
T9975 |
T9974 |
punct |
′,5 |
R6568 |
T9976 |
T9957 |
punct |
-,extension |
R6569 |
T9977 |
T9930 |
punct |
.,shown |
R6570 |
T9979 |
T9980 |
advmod |
However,require |
R6571 |
T9981 |
T9980 |
punct |
", ",require |
R6572 |
T9982 |
T9980 |
nsubj |
it,require |
R6573 |
T9983 |
T9980 |
aux |
does,require |
R6574 |
T9984 |
T9980 |
neg |
not,require |
R6575 |
T9985 |
T9980 |
advmod |
necessarily,require |
R6576 |
T9986 |
T9987 |
nummod |
3,end |
R6577 |
T9987 |
T9980 |
dobj |
end,require |
R6578 |
T9988 |
T9986 |
punct |
′,3 |
R6579 |
T9989 |
T9987 |
prep |
of,end |
R6580 |
T9990 |
T9991 |
amod |
single,stranded |
R6581 |
T9991 |
T9993 |
amod |
stranded,DNA |
R6582 |
T9992 |
T9991 |
punct |
-,stranded |
R6583 |
T9993 |
T9989 |
pobj |
DNA,of |
R6584 |
T9994 |
T9980 |
punct |
", ",require |
R6585 |
T9995 |
T9996 |
mark |
since,displace |
R6586 |
T9996 |
T9980 |
advcl |
displace,require |
R6587 |
T9997 |
T9996 |
nsubj |
Mcm4,displace |
R6588 |
T9998 |
T9997 |
punct |
/,Mcm4 |
R6589 |
T9999 |
T9997 |
nummod |
6,Mcm4 |
R6590 |
T10000 |
T9997 |
punct |
/,Mcm4 |
R6591 |
T10001 |
T9997 |
nummod |
7,Mcm4 |
R6592 |
T10002 |
T9996 |
aux |
can,displace |
R6593 |
T10003 |
T10004 |
amod |
annealing,oligonucleotide |
R6594 |
T10004 |
T9996 |
dobj |
oligonucleotide,displace |
R6595 |
T10005 |
T9996 |
prep |
on,displace |
R6596 |
T10006 |
T10007 |
det |
a,DNA |
R6597 |
T10007 |
T10005 |
pobj |
DNA,on |
R6598 |
T10008 |
T10007 |
amod |
circular,DNA |
R6599 |
T10009 |
T10010 |
amod |
single,stranded |
R6600 |
T10010 |
T10007 |
amod |
stranded,DNA |
R6601 |
T10011 |
T10010 |
punct |
-,stranded |
R6602 |
T10012 |
T9980 |
punct |
.,require |
R6603 |
T10014 |
T10015 |
det |
The,ability |
R6604 |
T10015 |
T10016 |
nsubjpass |
ability,shared |
R6605 |
T10017 |
T10015 |
prep |
of,ability |
R6606 |
T10018 |
T10019 |
det |
the,Mcm4 |
R6607 |
T10019 |
T10017 |
pobj |
Mcm4,of |
R6608 |
T10020 |
T10019 |
compound |
mouse,Mcm4 |
R6609 |
T10021 |
T10019 |
punct |
/,Mcm4 |
R6610 |
T10022 |
T10019 |
nummod |
6,Mcm4 |
R6611 |
T10023 |
T10019 |
punct |
/,Mcm4 |
R6612 |
T10024 |
T10019 |
nummod |
7,Mcm4 |
R6613 |
T10025 |
T10026 |
aux |
to,unwind |
R6614 |
T10026 |
T10015 |
acl |
unwind,ability |
R6615 |
T10027 |
T10028 |
nummod |
3,extension |
R6616 |
T10028 |
T10026 |
dobj |
extension,unwind |
R6617 |
T10029 |
T10027 |
punct |
′,3 |
R6618 |
T10030 |
T10028 |
punct |
-,extension |
R6619 |
T10031 |
T10016 |
auxpass |
is,shared |
R6620 |
T10032 |
T10016 |
prep |
by,shared |
R6621 |
T10033 |
T10034 |
det |
the,helicase |
R6622 |
T10034 |
T10032 |
pobj |
helicase,by |
R6623 |
T10035 |
T10034 |
amod |
archaeal,helicase |
R6624 |
T10036 |
T10034 |
compound |
Mcm,helicase |
R6625 |
T10037 |
T10032 |
cc |
but,by |
R6626 |
T10038 |
T10037 |
neg |
not,but |
R6627 |
T10039 |
T10032 |
conj |
by,by |
R6628 |
T10040 |
T10039 |
pobj |
Mcm4,by |
R6629 |
T10041 |
T10040 |
punct |
/,Mcm4 |
R6630 |
T10042 |
T10040 |
nummod |
6,Mcm4 |
R6631 |
T10043 |
T10040 |
punct |
/,Mcm4 |
R6632 |
T10044 |
T10040 |
nummod |
7,Mcm4 |
R6633 |
T10045 |
T10040 |
prep |
from,Mcm4 |
R6634 |
T10046 |
T10045 |
pobj |
S.pombe,from |
R6635 |
T10047 |
T10046 |
cc |
and,S.pombe |
R6636 |
T10048 |
T10046 |
conj |
S.cerevisiae,S.pombe |
R6637 |
T10049 |
T10050 |
punct |
(,27 |
R6638 |
T10050 |
T10016 |
parataxis |
27,shared |
R6639 |
T10051 |
T10050 |
nummod |
14,27 |
R6640 |
T10052 |
T10050 |
punct |
",",27 |
R6641 |
T10053 |
T10050 |
nummod |
26,27 |
R6642 |
T10054 |
T10050 |
punct |
",",27 |
R6643 |
T10055 |
T10050 |
punct |
),27 |
R6644 |
T10056 |
T10016 |
punct |
.,shared |
R6645 |
T10058 |
T10059 |
det |
The,Mcm |
R6646 |
T10059 |
T10061 |
nsubj |
Mcm,unwind |
R6647 |
T10060 |
T10059 |
amod |
archaeal,Mcm |
R6648 |
T10062 |
T10061 |
aux |
can,unwind |
R6649 |
T10063 |
T10064 |
compound |
A,fork |
R6650 |
T10064 |
T10061 |
dobj |
fork,unwind |
R6651 |
T10065 |
T10064 |
punct |
-,fork |
R6652 |
T10066 |
T10064 |
punct |
[,fork |
R6653 |
T10067 |
T10064 |
nummod |
3,fork |
R6654 |
T10068 |
T10064 |
punct |
′,fork |
R6655 |
T10069 |
T10061 |
punct |
],unwind |
R6656 |
T10070 |
T10061 |
cc |
but,unwind |
R6657 |
T10071 |
T10072 |
amod |
eukaryotic,Mcm4 |
R6658 |
T10072 |
T10073 |
nsubj |
Mcm4,can |
R6659 |
T10073 |
T10061 |
conj |
can,unwind |
R6660 |
T10074 |
T10072 |
punct |
/,Mcm4 |
R6661 |
T10075 |
T10072 |
nummod |
6,Mcm4 |
R6662 |
T10076 |
T10072 |
punct |
/,Mcm4 |
R6663 |
T10077 |
T10072 |
nummod |
7,Mcm4 |
R6664 |
T10078 |
T10073 |
neg |
not,can |
R6665 |
T10079 |
T10061 |
punct |
", ",unwind |
R6666 |
T10080 |
T10081 |
mark |
since,binds |
R6667 |
T10081 |
T10061 |
advcl |
binds,unwind |
R6668 |
T10082 |
T10083 |
det |
the,former |
R6669 |
T10083 |
T10081 |
nsubj |
former,binds |
R6670 |
T10084 |
T10081 |
prep |
to,binds |
R6671 |
T10085 |
T10086 |
amod |
double,stranded |
R6672 |
T10086 |
T10088 |
amod |
stranded,DNA |
R6673 |
T10087 |
T10086 |
punct |
-,stranded |
R6674 |
T10088 |
T10084 |
pobj |
DNA,to |
R6675 |
T10089 |
T10081 |
cc |
but,binds |
R6676 |
T10090 |
T10091 |
det |
the,latter |
R6677 |
T10091 |
T10092 |
nsubj |
latter,27 |
R6678 |
T10092 |
T10081 |
conj |
27,binds |
R6679 |
T10093 |
T10092 |
aux |
does,27 |
R6680 |
T10094 |
T10092 |
neg |
not,27 |
R6681 |
T10095 |
T10092 |
punct |
(,27 |
R6682 |
T10096 |
T10092 |
nummod |
5,27 |
R6683 |
T10097 |
T10092 |
punct |
",",27 |
R6684 |
T10098 |
T10092 |
punct |
),27 |
R6685 |
T10099 |
T10061 |
punct |
.,unwind |
R6686 |
T10101 |
T10102 |
mark |
While,translocate |
R6687 |
T10102 |
T10107 |
advcl |
translocate,observed |
R6688 |
T10103 |
T10104 |
compound |
yeast,Mcm |
R6689 |
T10104 |
T10105 |
compound |
Mcm,helicases |
R6690 |
T10105 |
T10102 |
nsubj |
helicases,translocate |
R6691 |
T10106 |
T10102 |
aux |
can,translocate |
R6692 |
T10108 |
T10102 |
prep |
on,translocate |
R6693 |
T10109 |
T10110 |
compound |
duplex,DNA |
R6694 |
T10110 |
T10108 |
pobj |
DNA,on |
R6695 |
T10111 |
T10107 |
punct |
", ",observed |
R6696 |
T10112 |
T10113 |
amod |
such,activity |
R6697 |
T10113 |
T10107 |
nsubjpass |
activity,observed |
R6698 |
T10114 |
T10107 |
auxpass |
was,observed |
R6699 |
T10115 |
T10107 |
neg |
not,observed |
R6700 |
T10116 |
T10107 |
prep |
with,observed |
R6701 |
T10117 |
T10118 |
amod |
mammalian,Mcm4 |
R6702 |
T10118 |
T10116 |
pobj |
Mcm4,with |
R6703 |
T10119 |
T10118 |
punct |
/,Mcm4 |
R6704 |
T10120 |
T10118 |
nummod |
6,Mcm4 |
R6705 |
T10121 |
T10118 |
punct |
/,Mcm4 |
R6706 |
T10122 |
T10118 |
nummod |
7,Mcm4 |
R6707 |
T10123 |
T10124 |
punct |
(,shown |
R6708 |
T10124 |
T10107 |
parataxis |
shown,observed |
R6709 |
T10125 |
T10124 |
nsubj |
data,shown |
R6710 |
T10126 |
T10124 |
neg |
not,shown |
R6711 |
T10127 |
T10124 |
punct |
),shown |
R6712 |
T10128 |
T10107 |
punct |
.,observed |
R6713 |
T10130 |
T10131 |
nsubj |
Occurrence,lead |
R6714 |
T10132 |
T10130 |
prep |
of,Occurrence |
R6715 |
T10133 |
T10134 |
npadvmod |
AT,rich |
R6716 |
T10134 |
T10136 |
amod |
rich,sequences |
R6717 |
T10135 |
T10134 |
punct |
-,rich |
R6718 |
T10136 |
T10132 |
pobj |
sequences,of |
R6719 |
T10137 |
T10130 |
punct |
", ",Occurrence |
R6720 |
T10138 |
T10130 |
prep |
with,Occurrence |
R6721 |
T10139 |
T10140 |
amod |
asymmetric,distribution |
R6722 |
T10140 |
T10138 |
pobj |
distribution,with |
R6723 |
T10141 |
T10140 |
prep |
of,distribution |
R6724 |
T10142 |
T10141 |
pobj |
adenine,of |
R6725 |
T10143 |
T10142 |
cc |
and,adenine |
R6726 |
T10144 |
T10142 |
conj |
thymine,adenine |
R6727 |
T10145 |
T10140 |
punct |
", ",distribution |
R6728 |
T10146 |
T10140 |
prep |
near,distribution |
R6729 |
T10147 |
T10148 |
det |
the,origins |
R6730 |
T10148 |
T10146 |
pobj |
origins,near |
R6731 |
T10149 |
T10148 |
compound |
replication,origins |
R6732 |
T10150 |
T10131 |
punct |
", ",lead |
R6733 |
T10151 |
T10131 |
dobj |
us,lead |
R6734 |
T10152 |
T10153 |
aux |
to,propose |
R6735 |
T10153 |
T10131 |
xcomp |
propose,lead |
R6736 |
T10154 |
T10155 |
mark |
that,play |
R6737 |
T10155 |
T10153 |
ccomp |
play,propose |
R6738 |
T10156 |
T10155 |
nsubj |
Mcm,play |
R6739 |
T10157 |
T10155 |
aux |
may,play |
R6740 |
T10158 |
T10159 |
det |
a,role |
R6741 |
T10159 |
T10155 |
dobj |
role,play |
R6742 |
T10160 |
T10155 |
prep |
in,play |
R6743 |
T10161 |
T10160 |
pobj |
selection,in |
R6744 |
T10162 |
T10161 |
prep |
of,selection |
R6745 |
T10163 |
T10164 |
compound |
initiation,sites |
R6746 |
T10164 |
T10162 |
pobj |
sites,of |
R6747 |
T10165 |
T10164 |
prep |
of,sites |
R6748 |
T10166 |
T10167 |
amod |
mammalian,DNA |
R6749 |
T10167 |
T10168 |
compound |
DNA,replication |
R6750 |
T10168 |
T10165 |
pobj |
replication,of |
R6751 |
T10169 |
T10131 |
punct |
", ",lead |
R6752 |
T10170 |
T10131 |
cc |
and,lead |
R6753 |
T10171 |
T10131 |
conj |
prompted,lead |
R6754 |
T10172 |
T10171 |
dobj |
us,prompted |
R6755 |
T10173 |
T10174 |
aux |
to,examine |
R6756 |
T10174 |
T10171 |
xcomp |
examine,prompted |
R6757 |
T10175 |
T10176 |
det |
the,ability |
R6758 |
T10176 |
T10174 |
dobj |
ability,examine |
R6759 |
T10177 |
T10176 |
prep |
of,ability |
R6760 |
T10178 |
T10177 |
pobj |
sequences,of |
R6761 |
T10179 |
T10178 |
prep |
from,sequences |
R6762 |
T10180 |
T10181 |
amod |
human,origins |
R6763 |
T10181 |
T10179 |
pobj |
origins,from |
R6764 |
T10182 |
T10181 |
compound |
replication,origins |
R6765 |
T10183 |
T10184 |
aux |
to,activate |
R6766 |
T10184 |
T10176 |
acl |
activate,ability |
R6767 |
T10185 |
T10186 |
nmod |
Mcm4,helicase |
R6768 |
T10186 |
T10184 |
dobj |
helicase,activate |
R6769 |
T10187 |
T10185 |
punct |
/,Mcm4 |
R6770 |
T10188 |
T10185 |
nummod |
6,Mcm4 |
R6771 |
T10189 |
T10185 |
punct |
/,Mcm4 |
R6772 |
T10190 |
T10185 |
nummod |
7,Mcm4 |
R6773 |
T10191 |
T10131 |
punct |
.,lead |
R6774 |
T10193 |
T10194 |
preconj |
Both,B2 |
R6775 |
T10194 |
T10197 |
nmod |
B2,origins |
R6776 |
T10195 |
T10194 |
nmod |
lamin,B2 |
R6777 |
T10196 |
T10194 |
punct |
-,B2 |
R6778 |
T10197 |
T10202 |
nsubj |
origins,served |
R6779 |
T10198 |
T10194 |
cc |
and,B2 |
R6780 |
T10199 |
T10200 |
compound |
c,myc |
R6781 |
T10200 |
T10194 |
conj |
myc,B2 |
R6782 |
T10201 |
T10200 |
punct |
-,myc |
R6783 |
T10203 |
T10202 |
prep |
as,served |
R6784 |
T10204 |
T10205 |
amod |
efficient,activator |
R6785 |
T10205 |
T10203 |
pobj |
activator,as |
R6786 |
T10206 |
T10205 |
prep |
for,activator |
R6787 |
T10207 |
T10208 |
compound |
Mcm,helicase |
R6788 |
T10208 |
T10206 |
pobj |
helicase,for |
R6789 |
T10209 |
T10210 |
advmod |
in,vitro |
R6790 |
T10210 |
T10202 |
advmod |
vitro,served |
R6791 |
T10211 |
T10202 |
punct |
.,served |
R6792 |
T10213 |
T10214 |
advcl |
Consistent,reported |
R6793 |
T10215 |
T10213 |
prep |
with,Consistent |
R6794 |
T10216 |
T10215 |
pobj |
it,with |
R6795 |
T10217 |
T10214 |
punct |
", ",reported |
R6796 |
T10218 |
T10219 |
npadvmod |
site,specific |
R6797 |
T10219 |
T10221 |
amod |
specific,loading |
R6798 |
T10220 |
T10219 |
punct |
-,specific |
R6799 |
T10221 |
T10214 |
nsubjpass |
loading,reported |
R6800 |
T10222 |
T10221 |
prep |
of,loading |
R6801 |
T10223 |
T10222 |
pobj |
Mcm,of |
R6802 |
T10224 |
T10221 |
prep |
in,loading |
R6803 |
T10225 |
T10226 |
det |
the,zone |
R6804 |
T10226 |
T10224 |
pobj |
zone,in |
R6805 |
T10227 |
T10228 |
compound |
DNA,initiation |
R6806 |
T10228 |
T10226 |
compound |
initiation,zone |
R6807 |
T10229 |
T10228 |
compound |
replication,initiation |
R6808 |
T10230 |
T10226 |
prep |
of,zone |
R6809 |
T10231 |
T10232 |
det |
the,myc |
R6810 |
T10232 |
T10230 |
pobj |
myc,of |
R6811 |
T10233 |
T10232 |
compound |
c,myc |
R6812 |
T10234 |
T10232 |
punct |
-,myc |
R6813 |
T10235 |
T10214 |
auxpass |
was,reported |
R6814 |
T10236 |
T10214 |
advmod |
recently,reported |
R6815 |
T10237 |
T10238 |
punct |
(,33 |
R6816 |
T10238 |
T10214 |
parataxis |
33,reported |
R6817 |
T10239 |
T10238 |
punct |
),33 |
R6818 |
T10240 |
T10214 |
punct |
.,reported |
R6819 |
T10242 |
T10243 |
nsubj |
We,examined |
R6820 |
T10244 |
T10243 |
aux |
have,examined |
R6821 |
T10245 |
T10243 |
prep |
in,examined |
R6822 |
T10246 |
T10245 |
pobj |
detail,in |
R6823 |
T10247 |
T10248 |
det |
the,effect |
R6824 |
T10248 |
T10243 |
dobj |
effect,examined |
R6825 |
T10249 |
T10248 |
prep |
of,effect |
R6826 |
T10250 |
T10251 |
compound |
sequence,context |
R6827 |
T10251 |
T10249 |
pobj |
context,of |
R6828 |
T10252 |
T10251 |
prep |
of,context |
R6829 |
T10253 |
T10254 |
det |
the,DNA |
R6830 |
T10254 |
T10252 |
pobj |
DNA,of |
R6831 |
T10255 |
T10256 |
amod |
single,stranded |
R6832 |
T10256 |
T10254 |
amod |
stranded,DNA |
R6833 |
T10257 |
T10256 |
punct |
-,stranded |
R6834 |
T10258 |
T10248 |
prep |
on,effect |
R6835 |
T10259 |
T10260 |
det |
the,activity |
R6836 |
T10260 |
T10258 |
pobj |
activity,on |
R6837 |
T10261 |
T10260 |
compound |
helicase,activity |
R6838 |
T10262 |
T10260 |
prep |
of,activity |
R6839 |
T10263 |
T10262 |
pobj |
Mcm,of |
R6840 |
T10264 |
T10243 |
punct |
.,examined |
R6841 |
T10266 |
T10267 |
det |
The,results |
R6842 |
T10267 |
T10268 |
nsubj |
results,indicate |
R6843 |
T10269 |
T10270 |
mark |
that,is |
R6844 |
T10270 |
T10268 |
ccomp |
is,indicate |
R6845 |
T10271 |
T10272 |
compound |
thymine,content |
R6846 |
T10272 |
T10270 |
nsubj |
content,is |
R6847 |
T10273 |
T10272 |
prep |
of,content |
R6848 |
T10274 |
T10275 |
nummod |
50,% |
R6849 |
T10275 |
T10273 |
pobj |
%,of |
R6850 |
T10276 |
T10270 |
acomp |
sufficient,is |
R6851 |
T10277 |
T10276 |
prep |
for,sufficient |
R6852 |
T10278 |
T10279 |
det |
the,activity |
R6853 |
T10279 |
T10277 |
pobj |
activity,for |
R6854 |
T10280 |
T10279 |
amod |
maximum,activity |
R6855 |
T10281 |
T10279 |
compound |
helicase,activity |
R6856 |
T10282 |
T10268 |
punct |
.,indicate |
R6857 |
T10284 |
T10285 |
det |
The,efficiency |
R6858 |
T10285 |
T10286 |
nsubj |
efficiency,decreased |
R6859 |
T10287 |
T10285 |
prep |
of,efficiency |
R6860 |
T10288 |
T10287 |
pobj |
displacement,of |
R6861 |
T10289 |
T10290 |
mark |
as,dropped |
R6862 |
T10290 |
T10286 |
advcl |
dropped,decreased |
R6863 |
T10291 |
T10292 |
det |
the,content |
R6864 |
T10292 |
T10290 |
nsubj |
content,dropped |
R6865 |
T10293 |
T10292 |
compound |
thymine,content |
R6866 |
T10294 |
T10292 |
prep |
of,content |
R6867 |
T10295 |
T10296 |
det |
the,tail |
R6868 |
T10296 |
T10294 |
pobj |
tail,of |
R6869 |
T10297 |
T10296 |
nummod |
3,tail |
R6870 |
T10298 |
T10297 |
punct |
′,3 |
R6871 |
T10299 |
T10296 |
punct |
-,tail |
R6872 |
T10300 |
T10290 |
prep |
to,dropped |
R6873 |
T10301 |
T10302 |
nummod |
33,% |
R6874 |
T10302 |
T10300 |
pobj |
%,to |
R6875 |
T10303 |
T10304 |
punct |
(,Figure |
R6876 |
T10304 |
T10290 |
parataxis |
Figure,dropped |
R6877 |
T10305 |
T10304 |
nummod |
6,Figure |
R6878 |
T10306 |
T10304 |
punct |
),Figure |
R6879 |
T10307 |
T10286 |
punct |
.,decreased |
R6880 |
T10309 |
T10310 |
det |
The,stretches |
R6881 |
T10310 |
T10311 |
nsubjpass |
stretches,required |
R6882 |
T10312 |
T10310 |
prep |
of,stretches |
R6883 |
T10313 |
T10314 |
compound |
thymine,residues |
R6884 |
T10314 |
T10312 |
pobj |
residues,of |
R6885 |
T10315 |
T10311 |
aux |
may,required |
R6886 |
T10316 |
T10311 |
neg |
not,required |
R6887 |
T10317 |
T10311 |
auxpass |
be,required |
R6888 |
T10318 |
T10311 |
advmod |
necessarily,required |
R6889 |
T10319 |
T10311 |
punct |
", ",required |
R6890 |
T10320 |
T10321 |
mark |
since,served |
R6891 |
T10321 |
T10311 |
advcl |
served,required |
R6892 |
T10322 |
T10321 |
nsubj |
repeats,served |
R6893 |
T10323 |
T10322 |
prep |
of,repeats |
R6894 |
T10324 |
T10325 |
compound |
TC,dinucleotides |
R6895 |
T10325 |
T10323 |
pobj |
dinucleotides,of |
R6896 |
T10326 |
T10321 |
prep |
as,served |
R6897 |
T10327 |
T10328 |
det |
a,activator |
R6898 |
T10328 |
T10326 |
pobj |
activator,as |
R6899 |
T10329 |
T10328 |
amod |
potent,activator |
R6900 |
T10330 |
T10328 |
prep |
for,activator |
R6901 |
T10331 |
T10330 |
pobj |
Mcm4,for |
R6902 |
T10332 |
T10331 |
punct |
/,Mcm4 |
R6903 |
T10333 |
T10331 |
nummod |
6,Mcm4 |
R6904 |
T10334 |
T10331 |
punct |
/,Mcm4 |
R6905 |
T10335 |
T10331 |
nummod |
7,Mcm4 |
R6906 |
T10336 |
T10311 |
punct |
.,required |
R6907 |
T10338 |
T10339 |
nsubj |
We,noticed |
R6908 |
T10340 |
T10339 |
advmod |
also,noticed |
R6909 |
T10341 |
T10342 |
mark |
that,is |
R6910 |
T10342 |
T10339 |
ccomp |
is,noticed |
R6911 |
T10343 |
T10344 |
det |
the,presence |
R6912 |
T10344 |
T10342 |
nsubj |
presence,is |
R6913 |
T10345 |
T10344 |
prep |
of,presence |
R6914 |
T10346 |
T10347 |
det |
a,structure |
R6915 |
T10347 |
T10345 |
pobj |
structure,of |
R6916 |
T10348 |
T10347 |
amod |
secondary,structure |
R6917 |
T10349 |
T10347 |
prep |
within,structure |
R6918 |
T10350 |
T10351 |
det |
the,DNA |
R6919 |
T10351 |
T10349 |
pobj |
DNA,within |
R6920 |
T10352 |
T10353 |
amod |
single,stranded |
R6921 |
T10353 |
T10351 |
amod |
stranded,DNA |
R6922 |
T10354 |
T10353 |
punct |
-,stranded |
R6923 |
T10355 |
T10342 |
acomp |
inhibitory,is |
R6924 |
T10356 |
T10355 |
prep |
for,inhibitory |
R6925 |
T10357 |
T10358 |
compound |
helicase,action |
R6926 |
T10358 |
T10356 |
pobj |
action,for |
R6927 |
T10359 |
T10339 |
punct |
.,noticed |
R6928 |
T10361 |
T10362 |
compound |
Nuclease,footprinting |
R6929 |
T10362 |
T10363 |
compound |
footprinting,assays |
R6930 |
T10363 |
T10364 |
nsubj |
assays,indicated |
R6931 |
T10365 |
T10366 |
mark |
that,interfered |
R6932 |
T10366 |
T10364 |
ccomp |
interfered,indicated |
R6933 |
T10367 |
T10366 |
nsubjpass |
binding,interfered |
R6934 |
T10368 |
T10366 |
auxpass |
was,interfered |
R6935 |
T10369 |
T10366 |
agent |
by,interfered |
R6936 |
T10370 |
T10371 |
det |
the,structure |
R6937 |
T10371 |
T10369 |
pobj |
structure,by |
R6938 |
T10372 |
T10371 |
amod |
secondary,structure |
R6939 |
T10373 |
T10374 |
punct |
(,shown |
R6940 |
T10374 |
T10366 |
parataxis |
shown,interfered |
R6941 |
T10375 |
T10374 |
nsubj |
data,shown |
R6942 |
T10376 |
T10374 |
neg |
not,shown |
R6943 |
T10377 |
T10374 |
punct |
),shown |
R6944 |
T10378 |
T10364 |
punct |
.,indicated |
R6945 |
T10380 |
T10381 |
advmod |
Thus,concluded |
R6946 |
T10382 |
T10381 |
punct |
", ",concluded |
R6947 |
T10383 |
T10381 |
nsubj |
we,concluded |
R6948 |
T10384 |
T10381 |
aux |
have,concluded |
R6949 |
T10385 |
T10386 |
mark |
that,activated |
R6950 |
T10386 |
T10381 |
ccomp |
activated,concluded |
R6951 |
T10387 |
T10388 |
nmod |
Mcm4,helicase |
R6952 |
T10388 |
T10386 |
nsubjpass |
helicase,activated |
R6953 |
T10389 |
T10387 |
punct |
/,Mcm4 |
R6954 |
T10390 |
T10387 |
nummod |
6,Mcm4 |
R6955 |
T10391 |
T10387 |
punct |
/,Mcm4 |
R6956 |
T10392 |
T10387 |
nummod |
7,Mcm4 |
R6957 |
T10393 |
T10386 |
auxpass |
is,activated |
R6958 |
T10394 |
T10395 |
advmod |
most,efficiently |
R6959 |
T10395 |
T10386 |
advmod |
efficiently,activated |
R6960 |
T10396 |
T10386 |
agent |
by,activated |
R6961 |
T10397 |
T10398 |
amod |
non-structured,DNA |
R6962 |
T10398 |
T10396 |
pobj |
DNA,by |
R6963 |
T10399 |
T10400 |
amod |
single,stranded |
R6964 |
T10400 |
T10398 |
amod |
stranded,DNA |
R6965 |
T10401 |
T10400 |
punct |
-,stranded |
R6966 |
T10402 |
T10398 |
prep |
with,DNA |
R6967 |
T10403 |
T10404 |
compound |
thymine,content |
R6968 |
T10404 |
T10402 |
pobj |
content,with |
R6969 |
T10405 |
T10404 |
prep |
of,content |
R6970 |
T10406 |
T10407 |
nummod |
50,% |
R6971 |
T10407 |
T10405 |
pobj |
%,of |
R6972 |
T10408 |
T10409 |
cc |
or,more |
R6973 |
T10409 |
T10407 |
nummod |
more,% |
R6974 |
T10410 |
T10386 |
punct |
", ",activated |
R6975 |
T10411 |
T10412 |
mark |
although,observed |
R6976 |
T10412 |
T10386 |
advcl |
observed,activated |
R6977 |
T10413 |
T10414 |
amod |
significant,stimulation |
R6978 |
T10414 |
T10412 |
nsubjpass |
stimulation,observed |
R6979 |
T10415 |
T10412 |
auxpass |
is,observed |
R6980 |
T10416 |
T10412 |
advmod |
also,observed |
R6981 |
T10417 |
T10412 |
agent |
by,observed |
R6982 |
T10418 |
T10417 |
pobj |
DNA,by |
R6983 |
T10419 |
T10418 |
prep |
with,DNA |
R6984 |
T10420 |
T10421 |
amod |
less,content |
R6985 |
T10421 |
T10419 |
pobj |
content,with |
R6986 |
T10422 |
T10421 |
compound |
thymine,content |
R6987 |
T10423 |
T10424 |
punct |
(,Figure |
R6988 |
T10424 |
T10418 |
parataxis |
Figure,DNA |
R6989 |
T10425 |
T10424 |
nummod |
7,Figure |
R6990 |
T10426 |
T10424 |
punct |
),Figure |
R6991 |
T10427 |
T10412 |
punct |
", ",observed |
R6992 |
T10428 |
T10412 |
advcl |
suggesting,observed |
R6993 |
T10429 |
T10430 |
mark |
that,is |
R6994 |
T10430 |
T10428 |
advcl |
is,suggesting |
R6995 |
T10431 |
T10432 |
det |
the,specificity |
R6996 |
T10432 |
T10430 |
nsubj |
specificity,is |
R6997 |
T10433 |
T10432 |
compound |
sequence,specificity |
R6998 |
T10434 |
T10432 |
prep |
for,specificity |
R6999 |
T10435 |
T10436 |
compound |
Mcm,helicase |
R7000 |
T10436 |
T10437 |
compound |
helicase,activation |
R7001 |
T10437 |
T10434 |
pobj |
activation,for |
R7002 |
T10438 |
T10439 |
advmod |
rather,relaxed |
R7003 |
T10439 |
T10430 |
acomp |
relaxed,is |
R7004 |
T10440 |
T10430 |
cc |
and,is |
R7005 |
T10441 |
T10442 |
mark |
that,depend |
R7006 |
T10442 |
T10430 |
conj |
depend,is |
R7007 |
T10443 |
T10444 |
det |
the,extent |
R7008 |
T10444 |
T10442 |
nsubj |
extent,depend |
R7009 |
T10445 |
T10444 |
prep |
of,extent |
R7010 |
T10446 |
T10447 |
det |
the,activation |
R7011 |
T10447 |
T10445 |
pobj |
activation,of |
R7012 |
T10448 |
T10442 |
aux |
may,depend |
R7013 |
T10449 |
T10442 |
prep |
on,depend |
R7014 |
T10450 |
T10451 |
det |
the,context |
R7015 |
T10451 |
T10449 |
pobj |
context,on |
R7016 |
T10452 |
T10451 |
compound |
sequence,context |
R7017 |
T10453 |
T10381 |
punct |
.,concluded |
R7018 |
T10455 |
T10456 |
nsubj |
This,be |
R7019 |
T10457 |
T10456 |
aux |
would,be |
R7020 |
T10458 |
T10456 |
acomp |
reasonable,be |
R7021 |
T10459 |
T10456 |
prep |
given,be |
R7022 |
T10460 |
T10461 |
det |
the,flexibility |
R7023 |
T10461 |
T10459 |
pobj |
flexibility,given |
R7024 |
T10462 |
T10461 |
cc |
and,flexibility |
R7025 |
T10463 |
T10464 |
amod |
differential,regulation |
R7026 |
T10464 |
T10461 |
conj |
regulation,flexibility |
R7027 |
T10465 |
T10461 |
prep |
of,flexibility |
R7028 |
T10466 |
T10467 |
compound |
site,selection |
R7029 |
T10467 |
T10465 |
pobj |
selection,of |
R7030 |
T10468 |
T10461 |
prep |
for,flexibility |
R7031 |
T10469 |
T10468 |
pobj |
initiation,for |
R7032 |
T10470 |
T10469 |
prep |
of,initiation |
R7033 |
T10471 |
T10472 |
compound |
DNA,replication |
R7034 |
T10472 |
T10470 |
pobj |
replication,of |
R7035 |
T10473 |
T10469 |
prep |
during,initiation |
R7036 |
T10474 |
T10473 |
pobj |
development,during |
R7037 |
T10475 |
T10468 |
cc |
or,for |
R7038 |
T10476 |
T10468 |
conj |
in,for |
R7039 |
T10477 |
T10478 |
amod |
various,types |
R7040 |
T10478 |
T10476 |
pobj |
types,in |
R7041 |
T10479 |
T10478 |
compound |
cell,types |
R7042 |
T10480 |
T10461 |
punct |
", ",flexibility |
R7043 |
T10481 |
T10482 |
advmod |
as,as |
R7044 |
T10482 |
T10461 |
cc |
as,flexibility |
R7045 |
T10483 |
T10482 |
advmod |
well,as |
R7046 |
T10484 |
T10485 |
det |
the,variability |
R7047 |
T10485 |
T10461 |
conj |
variability,flexibility |
R7048 |
T10486 |
T10485 |
prep |
in,variability |
R7049 |
T10487 |
T10488 |
compound |
initiation,potential |
R7050 |
T10488 |
T10486 |
pobj |
potential,in |
R7051 |
T10489 |
T10488 |
prep |
of,potential |
R7052 |
T10490 |
T10491 |
det |
each,origin |
R7053 |
T10491 |
T10489 |
pobj |
origin,of |
R7054 |
T10492 |
T10491 |
compound |
replication,origin |
R7055 |
T10493 |
T10491 |
prep |
on,origin |
R7056 |
T10494 |
T10495 |
det |
the,genome |
R7057 |
T10495 |
T10493 |
pobj |
genome,on |
R7058 |
T10496 |
T10497 |
advmod |
even,within |
R7059 |
T10497 |
T10485 |
prep |
within,variability |
R7060 |
T10498 |
T10499 |
det |
the,type |
R7061 |
T10499 |
T10497 |
pobj |
type,within |
R7062 |
T10500 |
T10499 |
amod |
single,type |
R7063 |
T10501 |
T10499 |
compound |
cell,type |
R7064 |
T10502 |
T10456 |
punct |
.,be |
R7067 |
T10855 |
T10856 |
nmod |
Mcm4,helicase |
R7068 |
T10857 |
T10855 |
punct |
/,Mcm4 |
R7069 |
T10858 |
T10855 |
nummod |
6,Mcm4 |
R7070 |
T10859 |
T10855 |
punct |
/,Mcm4 |
R7071 |
T10860 |
T10855 |
nummod |
7,Mcm4 |
R7072 |
T10861 |
T10856 |
prep |
during,helicase |
R7073 |
T10862 |
T10863 |
amod |
processive,unwinding |
R7074 |
T10863 |
T10861 |
pobj |
unwinding,during |
R7075 |
T10864 |
T10856 |
prep |
at,helicase |
R7076 |
T10865 |
T10866 |
det |
the,fork |
R7077 |
T10866 |
T10864 |
pobj |
fork,at |
R7078 |
T10868 |
T10869 |
det |
The,requirement |
R7079 |
T10869 |
T10871 |
nsubj |
requirement,prompted |
R7080 |
T10870 |
T10869 |
amod |
specific,requirement |
R7081 |
T10872 |
T10869 |
prep |
of,requirement |
R7082 |
T10873 |
T10874 |
amod |
single,stranded |
R7083 |
T10874 |
T10876 |
amod |
stranded,residues |
R7084 |
T10875 |
T10874 |
punct |
-,stranded |
R7085 |
T10876 |
T10872 |
pobj |
residues,of |
R7086 |
T10877 |
T10876 |
compound |
thymine,residues |
R7087 |
T10878 |
T10869 |
prep |
for,requirement |
R7088 |
T10879 |
T10878 |
pobj |
activation,for |
R7089 |
T10880 |
T10879 |
prep |
of,activation |
R7090 |
T10881 |
T10882 |
compound |
Mcm,helicase |
R7091 |
T10882 |
T10880 |
pobj |
helicase,of |
R7092 |
T10883 |
T10871 |
dobj |
us,prompted |
R7093 |
T10884 |
T10885 |
aux |
to,examine |
R7094 |
T10885 |
T10871 |
xcomp |
examine,prompted |
R7095 |
T10886 |
T10887 |
mark |
whether,required |
R7096 |
T10887 |
T10885 |
ccomp |
required,examine |
R7097 |
T10888 |
T10887 |
nsubjpass |
they,required |
R7098 |
T10889 |
T10887 |
auxpass |
are,required |
R7099 |
T10890 |
T10887 |
advmod |
also,required |
R7100 |
T10891 |
T10887 |
prep |
for,required |
R7101 |
T10892 |
T10893 |
amod |
processive,unwinding |
R7102 |
T10893 |
T10891 |
pobj |
unwinding,for |
R7103 |
T10894 |
T10893 |
prep |
of,unwinding |
R7104 |
T10895 |
T10896 |
compound |
duplex,DNA |
R7105 |
T10896 |
T10894 |
pobj |
DNA,of |
R7106 |
T10897 |
T10871 |
punct |
.,prompted |
R7107 |
T10899 |
T10900 |
poss |
Our,results |
R7108 |
T10900 |
T10901 |
nsubj |
results,indicated |
R7109 |
T10902 |
T10903 |
mark |
that,inhibited |
R7110 |
T10903 |
T10901 |
ccomp |
inhibited,indicated |
R7111 |
T10904 |
T10903 |
nsubj |
increase,inhibited |
R7112 |
T10905 |
T10904 |
prep |
of,increase |
R7113 |
T10906 |
T10907 |
compound |
GC,pair |
R7114 |
T10907 |
T10905 |
pobj |
pair,of |
R7115 |
T10908 |
T10904 |
prep |
in,increase |
R7116 |
T10909 |
T10910 |
det |
the,segment |
R7117 |
T10910 |
T10908 |
pobj |
segment,in |
R7118 |
T10911 |
T10910 |
compound |
duplex,segment |
R7119 |
T10912 |
T10903 |
advmod |
significantly,inhibited |
R7120 |
T10913 |
T10914 |
det |
the,activity |
R7121 |
T10914 |
T10903 |
dobj |
activity,inhibited |
R7122 |
T10915 |
T10916 |
compound |
Mcm,helicase |
R7123 |
T10916 |
T10914 |
compound |
helicase,activity |
R7124 |
T10917 |
T10901 |
punct |
.,indicated |
R7125 |
T10919 |
T10920 |
compound |
Duplex,DNA |
R7126 |
T10920 |
T10921 |
nsubjpass |
DNA,displaced |
R7127 |
T10922 |
T10920 |
acl |
composed,DNA |
R7128 |
T10923 |
T10924 |
advmod |
only,of |
R7129 |
T10924 |
T10922 |
prep |
of,composed |
R7130 |
T10925 |
T10926 |
compound |
GC,pairs |
R7131 |
T10926 |
T10924 |
pobj |
pairs,of |
R7132 |
T10927 |
T10928 |
punct |
(,repeats |
R7133 |
T10928 |
T10926 |
parataxis |
repeats,pairs |
R7134 |
T10929 |
T10928 |
nummod |
10,repeats |
R7135 |
T10930 |
T10928 |
prep |
of,repeats |
R7136 |
T10931 |
T10930 |
pobj |
CGG,of |
R7137 |
T10932 |
T10928 |
punct |
),repeats |
R7138 |
T10933 |
T10926 |
prep |
on,pairs |
R7139 |
T10934 |
T10935 |
det |
a,fork |
R7140 |
T10935 |
T10933 |
pobj |
fork,on |
R7141 |
T10936 |
T10935 |
compound |
Y,fork |
R7142 |
T10937 |
T10935 |
punct |
-,fork |
R7143 |
T10938 |
T10921 |
auxpass |
was,displaced |
R7144 |
T10939 |
T10921 |
neg |
not,displaced |
R7145 |
T10940 |
T10941 |
advmod |
at,all |
R7146 |
T10941 |
T10921 |
advmod |
all,displaced |
R7147 |
T10942 |
T10921 |
punct |
", ",displaced |
R7148 |
T10943 |
T10944 |
mark |
while,displaced |
R7149 |
T10944 |
T10921 |
advcl |
displaced,displaced |
R7150 |
T10945 |
T10946 |
det |
the,template |
R7151 |
T10946 |
T10944 |
nsubjpass |
template,displaced |
R7152 |
T10947 |
T10946 |
amod |
same,template |
R7153 |
T10948 |
T10944 |
auxpass |
was,displaced |
R7154 |
T10949 |
T10944 |
advmod |
readily,displaced |
R7155 |
T10950 |
T10944 |
agent |
by,displaced |
R7156 |
T10951 |
T10952 |
compound |
SV40,antigen |
R7157 |
T10952 |
T10950 |
pobj |
antigen,by |
R7158 |
T10953 |
T10952 |
compound |
T,antigen |
R7159 |
T10954 |
T10952 |
punct |
-,antigen |
R7160 |
T10955 |
T10956 |
punct |
(,8B |
R7161 |
T10956 |
T10944 |
parataxis |
8B,displaced |
R7162 |
T10957 |
T10956 |
compound |
Figure,8B |
R7163 |
T10958 |
T10956 |
punct |
),8B |
R7164 |
T10959 |
T10921 |
punct |
.,displaced |
R7165 |
T10961 |
T10962 |
compound |
Mcm,helicase |
R7166 |
T10962 |
T10963 |
nsubjpass |
helicase,inhibited |
R7167 |
T10964 |
T10963 |
auxpass |
was,inhibited |
R7168 |
T10965 |
T10963 |
agent |
by,inhibited |
R7169 |
T10966 |
T10967 |
det |
the,presence |
R7170 |
T10967 |
T10965 |
pobj |
presence,by |
R7171 |
T10968 |
T10967 |
prep |
of,presence |
R7172 |
T10969 |
T10970 |
npadvmod |
GC,rich |
R7173 |
T10970 |
T10972 |
amod |
rich,segment |
R7174 |
T10971 |
T10970 |
punct |
-,rich |
R7175 |
T10972 |
T10968 |
pobj |
segment,of |
R7176 |
T10973 |
T10972 |
compound |
duplex,segment |
R7177 |
T10974 |
T10975 |
advmod |
also,on |
R7178 |
T10975 |
T10967 |
prep |
on,presence |
R7179 |
T10976 |
T10977 |
det |
a,substrate |
R7180 |
T10977 |
T10975 |
pobj |
substrate,on |
R7181 |
T10978 |
T10977 |
amod |
circular,substrate |
R7182 |
T10979 |
T10980 |
amod |
single,stranded |
R7183 |
T10980 |
T10977 |
amod |
stranded,substrate |
R7184 |
T10981 |
T10980 |
punct |
-,stranded |
R7185 |
T10982 |
T10983 |
amod |
partial,heteroduplex |
R7186 |
T10983 |
T10977 |
compound |
heteroduplex,substrate |
R7187 |
T10984 |
T10963 |
punct |
.,inhibited |
R7188 |
T10986 |
T10987 |
advmod |
However,was |
R7189 |
T10988 |
T10987 |
punct |
", ",was |
R7190 |
T10989 |
T10987 |
prep |
on,was |
R7191 |
T10990 |
T10991 |
det |
this,substrate |
R7192 |
T10991 |
T10989 |
pobj |
substrate,on |
R7193 |
T10992 |
T10987 |
punct |
", ",was |
R7194 |
T10993 |
T10987 |
nsubj |
Mcm4,was |
R7195 |
T10994 |
T10993 |
punct |
/,Mcm4 |
R7196 |
T10995 |
T10993 |
nummod |
6,Mcm4 |
R7197 |
T10996 |
T10993 |
punct |
/,Mcm4 |
R7198 |
T10997 |
T10993 |
nummod |
7,Mcm4 |
R7199 |
T10998 |
T10987 |
acomp |
able,was |
R7200 |
T10999 |
T11000 |
aux |
to,displace |
R7201 |
T11000 |
T10998 |
xcomp |
displace,able |
R7202 |
T11001 |
T11000 |
dobj |
DNA,displace |
R7203 |
T11002 |
T11000 |
prep |
past,displace |
R7204 |
T11003 |
T11004 |
det |
the,region |
R7205 |
T11004 |
T11002 |
pobj |
region,past |
R7206 |
T11005 |
T11006 |
npadvmod |
GC,rich |
R7207 |
T11006 |
T11004 |
amod |
rich,region |
R7208 |
T11007 |
T11006 |
punct |
-,rich |
R7209 |
T11008 |
T11000 |
punct |
", ",displace |
R7210 |
T11009 |
T11010 |
dep |
albeit,to |
R7211 |
T11010 |
T11000 |
prep |
to,displace |
R7212 |
T11011 |
T11012 |
det |
a,extent |
R7213 |
T11012 |
T11010 |
pobj |
extent,to |
R7214 |
T11013 |
T11012 |
amod |
limited,extent |
R7215 |
T11014 |
T11000 |
punct |
", ",displace |
R7216 |
T11015 |
T11016 |
advmod |
when,added |
R7217 |
T11016 |
T11000 |
advcl |
added,displace |
R7218 |
T11017 |
T11016 |
nsubjpass |
it,added |
R7219 |
T11018 |
T11016 |
auxpass |
was,added |
R7220 |
T11019 |
T11016 |
prep |
at,added |
R7221 |
T11020 |
T11021 |
det |
a,concentration |
R7222 |
T11021 |
T11019 |
pobj |
concentration,at |
R7223 |
T11022 |
T11021 |
amod |
high,concentration |
R7224 |
T11023 |
T10987 |
punct |
.,was |
R7225 |
T11025 |
T11026 |
prep |
On,loaded |
R7226 |
T11027 |
T11028 |
det |
the,template |
R7227 |
T11028 |
T11025 |
pobj |
template,On |
R7228 |
T11029 |
T11030 |
amod |
partial,heteroduplex |
R7229 |
T11030 |
T11028 |
compound |
heteroduplex,template |
R7230 |
T11031 |
T11026 |
punct |
", ",loaded |
R7231 |
T11032 |
T11026 |
nsubjpass |
Mcm,loaded |
R7232 |
T11033 |
T11026 |
auxpass |
is,loaded |
R7233 |
T11034 |
T11026 |
prep |
onto,loaded |
R7234 |
T11035 |
T11036 |
det |
the,DNA |
R7235 |
T11036 |
T11034 |
pobj |
DNA,onto |
R7236 |
T11037 |
T11036 |
amod |
circular,DNA |
R7237 |
T11038 |
T11039 |
amod |
single,stranded |
R7238 |
T11039 |
T11036 |
amod |
stranded,DNA |
R7239 |
T11040 |
T11039 |
punct |
-,stranded |
R7240 |
T11041 |
T11036 |
prep |
of,DNA |
R7241 |
T11042 |
T11043 |
nummod |
6.4,kb |
R7242 |
T11043 |
T11041 |
pobj |
kb,of |
R7243 |
T11044 |
T11026 |
punct |
", ",loaded |
R7244 |
T11045 |
T11046 |
mark |
while,loaded |
R7245 |
T11046 |
T11026 |
advcl |
loaded,loaded |
R7246 |
T11047 |
T11046 |
nsubjpass |
it,loaded |
R7247 |
T11048 |
T11046 |
auxpass |
is,loaded |
R7248 |
T11049 |
T11046 |
prep |
onto,loaded |
R7249 |
T11050 |
T11051 |
det |
the,DNA |
R7250 |
T11051 |
T11049 |
pobj |
DNA,onto |
R7251 |
T11052 |
T11053 |
nummod |
50,nt |
R7252 |
T11053 |
T11054 |
npadvmod |
nt,long |
R7253 |
T11054 |
T11051 |
amod |
long,DNA |
R7254 |
T11055 |
T11056 |
nummod |
3,tail |
R7255 |
T11056 |
T11051 |
compound |
tail,DNA |
R7256 |
T11057 |
T11055 |
punct |
′,3 |
R7257 |
T11058 |
T11056 |
punct |
-,tail |
R7258 |
T11059 |
T11051 |
prep |
on,DNA |
R7259 |
T11060 |
T11061 |
det |
the,fork |
R7260 |
T11061 |
T11059 |
pobj |
fork,on |
R7261 |
T11062 |
T11061 |
compound |
Y,fork |
R7262 |
T11063 |
T11061 |
punct |
-,fork |
R7263 |
T11064 |
T11026 |
punct |
.,loaded |
R7264 |
T11066 |
T11067 |
advmod |
Thus,reflect |
R7265 |
T11068 |
T11067 |
punct |
", ",reflect |
R7266 |
T11069 |
T11070 |
det |
the,difference |
R7267 |
T11070 |
T11067 |
nsubj |
difference,reflect |
R7268 |
T11071 |
T11070 |
prep |
of,difference |
R7269 |
T11072 |
T11073 |
compound |
helicase,actions |
R7270 |
T11073 |
T11071 |
pobj |
actions,of |
R7271 |
T11074 |
T11067 |
aux |
may,reflect |
R7272 |
T11075 |
T11076 |
det |
the,efficiency |
R7273 |
T11076 |
T11067 |
dobj |
efficiency,reflect |
R7274 |
T11077 |
T11076 |
prep |
of,efficiency |
R7275 |
T11078 |
T11079 |
compound |
Mcm,loading |
R7276 |
T11079 |
T11077 |
pobj |
loading,of |
R7277 |
T11080 |
T11067 |
punct |
.,reflect |
R7278 |
T11082 |
T11083 |
advmod |
Alternatively,engage |
R7279 |
T11084 |
T11083 |
punct |
", ",engage |
R7280 |
T11085 |
T11086 |
det |
the,presence |
R7281 |
T11086 |
T11083 |
nsubj |
presence,engage |
R7282 |
T11087 |
T11086 |
prep |
of,presence |
R7283 |
T11088 |
T11087 |
punct |
‘,of |
R7284 |
T11089 |
T11090 |
amod |
random,sequence |
R7285 |
T11090 |
T11087 |
pobj |
sequence,of |
R7286 |
T11091 |
T11090 |
punct |
’,sequence |
R7287 |
T11092 |
T11086 |
prep |
at,presence |
R7288 |
T11093 |
T11094 |
det |
the,segment |
R7289 |
T11094 |
T11092 |
pobj |
segment,at |
R7290 |
T11095 |
T11096 |
advmod |
initially,unwound |
R7291 |
T11096 |
T11094 |
amod |
unwound,segment |
R7292 |
T11097 |
T11094 |
compound |
duplex,segment |
R7293 |
T11098 |
T11094 |
prep |
in,segment |
R7294 |
T11099 |
T11100 |
det |
the,template |
R7295 |
T11100 |
T11098 |
pobj |
template,in |
R7296 |
T11101 |
T11100 |
amod |
former,template |
R7297 |
T11102 |
T11083 |
aux |
may,engage |
R7298 |
T11103 |
T11104 |
det |
the,helicase |
R7299 |
T11104 |
T11083 |
dobj |
helicase,engage |
R7300 |
T11105 |
T11104 |
compound |
Mcm,helicase |
R7301 |
T11106 |
T11083 |
prep |
in,engage |
R7302 |
T11107 |
T11108 |
det |
a,conformation |
R7303 |
T11108 |
T11106 |
pobj |
conformation,in |
R7304 |
T11109 |
T11110 |
advmod |
more,active |
R7305 |
T11110 |
T11108 |
amod |
active,conformation |
R7306 |
T11111 |
T11112 |
dep |
which,displace |
R7307 |
T11112 |
T11108 |
relcl |
displace,conformation |
R7308 |
T11113 |
T11112 |
aux |
can,displace |
R7309 |
T11114 |
T11115 |
det |
the,segment |
R7310 |
T11115 |
T11112 |
dobj |
segment,displace |
R7311 |
T11116 |
T11117 |
npadvmod |
GC,rich |
R7312 |
T11117 |
T11115 |
amod |
rich,segment |
R7313 |
T11118 |
T11117 |
punct |
-,rich |
R7314 |
T11119 |
T11115 |
compound |
duplex,segment |
R7315 |
T11120 |
T11083 |
punct |
.,engage |
R7316 |
T11122 |
T11123 |
prep |
On,restored |
R7317 |
T11124 |
T11125 |
compound |
Y,fork |
R7318 |
T11125 |
T11127 |
compound |
fork,substrates |
R7319 |
T11126 |
T11125 |
punct |
-,fork |
R7320 |
T11127 |
T11122 |
pobj |
substrates,On |
R7321 |
T11128 |
T11123 |
punct |
", ",restored |
R7322 |
T11129 |
T11123 |
nsubj |
increase,restored |
R7323 |
T11130 |
T11129 |
prep |
of,increase |
R7324 |
T11131 |
T11132 |
compound |
AT,pairs |
R7325 |
T11132 |
T11130 |
pobj |
pairs,of |
R7326 |
T11133 |
T11132 |
compound |
base,pairs |
R7327 |
T11134 |
T11129 |
prep |
in,increase |
R7328 |
T11135 |
T11136 |
det |
the,duplex |
R7329 |
T11136 |
T11134 |
pobj |
duplex,in |
R7330 |
T11137 |
T11138 |
punct |
(,repeats |
R7331 |
T11138 |
T11136 |
parataxis |
repeats,duplex |
R7332 |
T11139 |
T11138 |
nummod |
10,repeats |
R7333 |
T11140 |
T11138 |
prep |
of,repeats |
R7334 |
T11141 |
T11140 |
pobj |
CTT,of |
R7335 |
T11142 |
T11138 |
punct |
),repeats |
R7336 |
T11143 |
T11144 |
det |
the,unwinding |
R7337 |
T11144 |
T11123 |
dobj |
unwinding,restored |
R7338 |
T11145 |
T11123 |
punct |
.,restored |
R7339 |
T11147 |
T11148 |
det |
These,results |
R7340 |
T11148 |
T11149 |
nsubj |
results,indicate |
R7341 |
T11150 |
T11151 |
preconj |
either,required |
R7342 |
T11151 |
T11149 |
advcl |
required,indicate |
R7343 |
T11152 |
T11151 |
mark |
that,required |
R7344 |
T11153 |
T11154 |
compound |
thymine,residues |
R7345 |
T11154 |
T11151 |
nsubjpass |
residues,required |
R7346 |
T11155 |
T11151 |
auxpass |
are,required |
R7347 |
T11156 |
T11151 |
prep |
on,required |
R7348 |
T11157 |
T11158 |
det |
the,DNA |
R7349 |
T11158 |
T11156 |
pobj |
DNA,on |
R7350 |
T11159 |
T11158 |
compound |
duplex,DNA |
R7351 |
T11160 |
T11151 |
prep |
for,required |
R7352 |
T11161 |
T11162 |
amod |
continuous,unwinding |
R7353 |
T11162 |
T11160 |
pobj |
unwinding,for |
R7354 |
T11163 |
T11151 |
punct |
", ",required |
R7355 |
T11164 |
T11151 |
cc |
or,required |
R7356 |
T11165 |
T11166 |
mark |
that,is |
R7357 |
T11166 |
T11151 |
conj |
is,required |
R7358 |
T11167 |
T11166 |
nsubj |
Mcm4,is |
R7359 |
T11168 |
T11167 |
punct |
/,Mcm4 |
R7360 |
T11169 |
T11167 |
nummod |
6,Mcm4 |
R7361 |
T11170 |
T11167 |
punct |
/,Mcm4 |
R7362 |
T11171 |
T11167 |
nummod |
7,Mcm4 |
R7363 |
T11172 |
T11166 |
advmod |
simply,is |
R7364 |
T11173 |
T11166 |
neg |
not,is |
R7365 |
T11174 |
T11166 |
acomp |
efficient,is |
R7366 |
T11175 |
T11174 |
advmod |
enough,efficient |
R7367 |
T11176 |
T11177 |
aux |
to,unwind |
R7368 |
T11177 |
T11174 |
xcomp |
unwind,efficient |
R7369 |
T11178 |
T11179 |
det |
the,pairs |
R7370 |
T11179 |
T11177 |
dobj |
pairs,unwind |
R7371 |
T11180 |
T11179 |
amod |
stable,pairs |
R7372 |
T11181 |
T11179 |
compound |
GC,pairs |
R7373 |
T11182 |
T11149 |
punct |
.,indicate |
R7374 |
T11184 |
T11185 |
nsubj |
Replacement,resulted |
R7375 |
T11186 |
T11184 |
prep |
of,Replacement |
R7376 |
T11187 |
T11188 |
det |
the,guanosine |
R7377 |
T11188 |
T11186 |
pobj |
guanosine,of |
R7378 |
T11189 |
T11188 |
amod |
central,guanosine |
R7379 |
T11190 |
T11184 |
prep |
with,Replacement |
R7380 |
T11191 |
T11190 |
pobj |
inosine,with |
R7381 |
T11192 |
T11184 |
prep |
in,Replacement |
R7382 |
T11193 |
T11194 |
det |
the,DNA |
R7383 |
T11194 |
T11192 |
pobj |
DNA,in |
R7384 |
T11195 |
T11196 |
compound |
CGG,repeat |
R7385 |
T11196 |
T11194 |
compound |
repeat,DNA |
R7386 |
T11197 |
T11194 |
compound |
duplex,DNA |
R7387 |
T11198 |
T11185 |
prep |
in,resulted |
R7388 |
T11199 |
T11198 |
pobj |
displacement,in |
R7389 |
T11200 |
T11201 |
punct |
(,8E |
R7390 |
T11201 |
T11185 |
parataxis |
8E,resulted |
R7391 |
T11202 |
T11201 |
compound |
Figure,8E |
R7392 |
T11203 |
T11201 |
punct |
),8E |
R7393 |
T11204 |
T11205 |
punct |
(,31 |
R7394 |
T11205 |
T11185 |
parataxis |
31,resulted |
R7395 |
T11206 |
T11205 |
punct |
),31 |
R7396 |
T11207 |
T11185 |
punct |
", ",resulted |
R7397 |
T11208 |
T11185 |
advcl |
suggesting,resulted |
R7398 |
T11209 |
T11210 |
mark |
that,be |
R7399 |
T11210 |
T11208 |
advcl |
be,suggesting |
R7400 |
T11211 |
T11212 |
det |
the,presence |
R7401 |
T11212 |
T11210 |
nsubj |
presence,be |
R7402 |
T11213 |
T11212 |
amod |
continuous,presence |
R7403 |
T11214 |
T11212 |
prep |
of,presence |
R7404 |
T11215 |
T11216 |
compound |
AT,pair |
R7405 |
T11216 |
T11214 |
pobj |
pair,of |
R7406 |
T11217 |
T11216 |
compound |
base,pair |
R7407 |
T11218 |
T11210 |
aux |
may,be |
R7408 |
T11219 |
T11210 |
neg |
not,be |
R7409 |
T11220 |
T11210 |
acomp |
essential,be |
R7410 |
T11221 |
T11220 |
prep |
for,essential |
R7411 |
T11222 |
T11223 |
det |
the,function |
R7412 |
T11223 |
T11221 |
pobj |
function,for |
R7413 |
T11224 |
T11225 |
compound |
Mcm,helicase |
R7414 |
T11225 |
T11223 |
compound |
helicase,function |
R7415 |
T11226 |
T11210 |
cc |
and,be |
R7416 |
T11227 |
T11228 |
mark |
that,is |
R7417 |
T11228 |
T11210 |
conj |
is,be |
R7418 |
T11229 |
T11230 |
det |
the,thermostability |
R7419 |
T11230 |
T11228 |
nsubj |
thermostability,is |
R7420 |
T11231 |
T11230 |
prep |
of,thermostability |
R7421 |
T11232 |
T11233 |
compound |
GC,pairs |
R7422 |
T11233 |
T11231 |
pobj |
pairs,of |
R7423 |
T11234 |
T11233 |
compound |
base,pairs |
R7424 |
T11235 |
T11228 |
acomp |
inhibitory,is |
R7425 |
T11236 |
T11235 |
prep |
for,inhibitory |
R7426 |
T11237 |
T11238 |
compound |
helicase,action |
R7427 |
T11238 |
T11236 |
pobj |
action,for |
R7428 |
T11239 |
T11238 |
prep |
of,action |
R7429 |
T11240 |
T11239 |
pobj |
Mcm4,of |
R7430 |
T11241 |
T11240 |
punct |
/,Mcm4 |
R7431 |
T11242 |
T11240 |
nummod |
6,Mcm4 |
R7432 |
T11243 |
T11240 |
punct |
/,Mcm4 |
R7433 |
T11244 |
T11240 |
nummod |
7,Mcm4 |
R7434 |
T11245 |
T11185 |
punct |
.,resulted |
R7435 |
T11247 |
T11248 |
det |
The,results |
R7436 |
T11248 |
T11249 |
nsubj |
results,reveal |
R7437 |
T11250 |
T11248 |
acl |
described,results |
R7438 |
T11251 |
T11250 |
prep |
in,described |
R7439 |
T11252 |
T11253 |
det |
this,manuscript |
R7440 |
T11253 |
T11251 |
pobj |
manuscript,in |
R7441 |
T11254 |
T11255 |
advmod |
potentially,important |
R7442 |
T11255 |
T11256 |
amod |
important,features |
R7443 |
T11256 |
T11249 |
dobj |
features,reveal |
R7444 |
T11257 |
T11256 |
prep |
of,features |
R7445 |
T11258 |
T11259 |
amod |
mammalian,helicase |
R7446 |
T11259 |
T11257 |
pobj |
helicase,of |
R7447 |
T11260 |
T11259 |
nmod |
Mcm4,helicase |
R7448 |
T11261 |
T11260 |
punct |
/,Mcm4 |
R7449 |
T11262 |
T11260 |
nummod |
6,Mcm4 |
R7450 |
T11263 |
T11260 |
punct |
/,Mcm4 |
R7451 |
T11264 |
T11260 |
nummod |
7,Mcm4 |
R7452 |
T11265 |
T11259 |
punct |
", ",helicase |
R7453 |
T11266 |
T11267 |
dep |
which,is |
R7454 |
T11267 |
T11259 |
relcl |
is,helicase |
R7455 |
T11268 |
T11267 |
acomp |
likely,is |
R7456 |
T11269 |
T11270 |
aux |
to,be |
R7457 |
T11270 |
T11268 |
xcomp |
be,likely |
R7458 |
T11271 |
T11272 |
det |
a,component |
R7459 |
T11272 |
T11270 |
attr |
component,be |
R7460 |
T11273 |
T11272 |
amod |
key,component |
R7461 |
T11274 |
T11272 |
prep |
of,component |
R7462 |
T11275 |
T11276 |
det |
the,helicase |
R7463 |
T11276 |
T11274 |
pobj |
helicase,of |
R7464 |
T11277 |
T11276 |
amod |
eukaryotic,helicase |
R7465 |
T11278 |
T11276 |
amod |
replicative,helicase |
R7466 |
T11279 |
T11249 |
punct |
.,reveal |
R7467 |
T11281 |
T11282 |
amod |
Prior,to |
R7468 |
T11282 |
T11283 |
prep |
to,adopt |
R7469 |
T11284 |
T11282 |
pobj |
initiation,to |
R7470 |
T11285 |
T11284 |
prep |
of,initiation |
R7471 |
T11286 |
T11287 |
compound |
DNA,replication |
R7472 |
T11287 |
T11285 |
pobj |
replication,of |
R7473 |
T11288 |
T11283 |
punct |
", ",adopt |
R7474 |
T11289 |
T11290 |
compound |
Mcm,helicase |
R7475 |
T11290 |
T11283 |
nsubj |
helicase,adopt |
R7476 |
T11291 |
T11283 |
aux |
may,adopt |
R7477 |
T11292 |
T11293 |
det |
a,complex |
R7478 |
T11293 |
T11283 |
dobj |
complex,adopt |
R7479 |
T11294 |
T11295 |
amod |
double,hexameric |
R7480 |
T11295 |
T11293 |
amod |
hexameric,complex |
R7481 |
T11296 |
T11283 |
prep |
at,adopt |
R7482 |
T11297 |
T11298 |
det |
the,region |
R7483 |
T11298 |
T11296 |
pobj |
region,at |
R7484 |
T11299 |
T11300 |
advmod |
partially,melted |
R7485 |
T11300 |
T11298 |
amod |
melted,region |
R7486 |
T11301 |
T11298 |
compound |
origin,region |
R7487 |
T11302 |
T11283 |
punct |
", ",adopt |
R7488 |
T11303 |
T11283 |
cc |
and,adopt |
R7489 |
T11304 |
T11305 |
aux |
may,catalyze |
R7490 |
T11305 |
T11283 |
conj |
catalyze,adopt |
R7491 |
T11306 |
T11307 |
amod |
concurrent,unwinding |
R7492 |
T11307 |
T11305 |
dobj |
unwinding,catalyze |
R7493 |
T11308 |
T11307 |
prep |
of,unwinding |
R7494 |
T11309 |
T11310 |
compound |
duplex,DNA |
R7495 |
T11310 |
T11308 |
pobj |
DNA,of |
R7496 |
T11311 |
T11305 |
prep |
into,catalyze |
R7497 |
T11312 |
T11313 |
det |
both,directions |
R7498 |
T11313 |
T11311 |
pobj |
directions,into |
R7499 |
T11314 |
T11283 |
punct |
", ",adopt |
R7500 |
T11315 |
T11316 |
mark |
while,associated |
R7501 |
T11316 |
T11283 |
advcl |
associated,adopt |
R7502 |
T11317 |
T11316 |
advmod |
stably,associated |
R7503 |
T11318 |
T11316 |
prep |
with,associated |
R7504 |
T11319 |
T11320 |
det |
the,origins |
R7505 |
T11320 |
T11318 |
pobj |
origins,with |
R7506 |
T11321 |
T11320 |
prep |
of,origins |
R7507 |
T11322 |
T11323 |
compound |
DNA,replication |
R7508 |
T11323 |
T11321 |
pobj |
replication,of |
R7509 |
T11324 |
T11283 |
punct |
.,adopt |
R7510 |
T11326 |
T11327 |
nsubj |
This,is |
R7511 |
T11328 |
T11327 |
acomp |
similar,is |
R7512 |
T11329 |
T11328 |
prep |
to,similar |
R7513 |
T11330 |
T11331 |
det |
the,model |
R7514 |
T11331 |
T11329 |
pobj |
model,to |
R7515 |
T11332 |
T11333 |
compound |
T,antigen |
R7516 |
T11333 |
T11331 |
compound |
antigen,model |
R7517 |
T11334 |
T11333 |
punct |
-,antigen |
R7518 |
T11335 |
T11336 |
advmod |
originally,proposed |
R7519 |
T11336 |
T11331 |
acl |
proposed,model |
R7520 |
T11337 |
T11336 |
agent |
by,proposed |
R7521 |
T11338 |
T11337 |
pobj |
Smelkova,by |
R7522 |
T11339 |
T11338 |
cc |
and,Smelkova |
R7523 |
T11340 |
T11338 |
conj |
Borowiec,Smelkova |
R7524 |
T11341 |
T11342 |
punct |
(,21 |
R7525 |
T11342 |
T11340 |
parataxis |
21,Borowiec |
R7526 |
T11343 |
T11342 |
punct |
),21 |
R7527 |
T11344 |
T11327 |
punct |
.,is |
R7528 |
T11346 |
T11347 |
nsubj |
We,propose |
R7529 |
T11348 |
T11349 |
mark |
that,mobilized |
R7530 |
T11349 |
T11347 |
ccomp |
mobilized,propose |
R7531 |
T11350 |
T11349 |
punct |
", ",mobilized |
R7532 |
T11351 |
T11352 |
advmod |
only,activated |
R7533 |
T11352 |
T11349 |
advcl |
activated,mobilized |
R7534 |
T11353 |
T11352 |
advmod |
when,activated |
R7535 |
T11354 |
T11355 |
det |
both,hexamers |
R7536 |
T11355 |
T11352 |
nsubjpass |
hexamers,activated |
R7537 |
T11356 |
T11352 |
auxpass |
are,activated |
R7538 |
T11357 |
T11352 |
agent |
by,activated |
R7539 |
T11358 |
T11359 |
det |
the,sequences |
R7540 |
T11359 |
T11357 |
pobj |
sequences,by |
R7541 |
T11360 |
T11359 |
amod |
interacting,sequences |
R7542 |
T11361 |
T11362 |
npadvmod |
thymine,rich |
R7543 |
T11362 |
T11359 |
amod |
rich,sequences |
R7544 |
T11363 |
T11362 |
punct |
-,rich |
R7545 |
T11364 |
T11359 |
relcl |
present,sequences |
R7546 |
T11365 |
T11364 |
prep |
within,present |
R7547 |
T11366 |
T11367 |
det |
the,region |
R7548 |
T11367 |
T11365 |
pobj |
region,within |
R7549 |
T11368 |
T11367 |
amod |
melted,region |
R7550 |
T11369 |
T11349 |
punct |
", ",mobilized |
R7551 |
T11370 |
T11371 |
det |
the,helicase |
R7552 |
T11371 |
T11349 |
nsubjpass |
helicase,mobilized |
R7553 |
T11372 |
T11371 |
compound |
Mcm,helicase |
R7554 |
T11373 |
T11349 |
auxpass |
is,mobilized |
R7555 |
T11374 |
T11349 |
cc |
and,mobilized |
R7556 |
T11375 |
T11376 |
nsubj |
initiation,takes |
R7557 |
T11376 |
T11349 |
conj |
takes,mobilized |
R7558 |
T11377 |
T11376 |
dobj |
place,takes |
R7559 |
T11378 |
T11347 |
punct |
.,propose |
R7560 |
T11380 |
T11381 |
det |
A,question |
R7561 |
T11381 |
T11383 |
nsubj |
question,is |
R7562 |
T11382 |
T11381 |
amod |
crucial,question |
R7563 |
T11384 |
T11385 |
advmod |
how,generated |
R7564 |
T11385 |
T11383 |
ccomp |
generated,is |
R7565 |
T11386 |
T11387 |
det |
these,complexes |
R7566 |
T11387 |
T11385 |
nsubjpass |
complexes,generated |
R7567 |
T11388 |
T11389 |
advmod |
double,hexameric |
R7568 |
T11389 |
T11387 |
amod |
hexameric,complexes |
R7569 |
T11390 |
T11387 |
compound |
helicase,complexes |
R7570 |
T11391 |
T11385 |
auxpass |
are,generated |
R7571 |
T11392 |
T11385 |
cc |
and,generated |
R7572 |
T11393 |
T11385 |
conj |
turn,generated |
R7573 |
T11394 |
T11393 |
prep |
into,turn |
R7574 |
T11395 |
T11396 |
amod |
active,helicases |
R7575 |
T11396 |
T11394 |
pobj |
helicases,into |
R7576 |
T11397 |
T11393 |
prep |
at,turn |
R7577 |
T11398 |
T11399 |
det |
the,origins |
R7578 |
T11399 |
T11397 |
pobj |
origins,at |
R7579 |
T11400 |
T11383 |
punct |
.,is |
R7580 |
T11402 |
T11403 |
det |
This,process |
R7581 |
T11403 |
T11404 |
nsubj |
process,involve |
R7582 |
T11405 |
T11404 |
aux |
would,involve |
R7583 |
T11406 |
T11404 |
dobj |
melting,involve |
R7584 |
T11407 |
T11406 |
prep |
of,melting |
R7585 |
T11408 |
T11409 |
compound |
duplex,DNA |
R7586 |
T11409 |
T11407 |
pobj |
DNA,of |
R7587 |
T11410 |
T11406 |
punct |
", ",melting |
R7588 |
T11411 |
T11412 |
dep |
which,facilitated |
R7589 |
T11412 |
T11406 |
relcl |
facilitated,melting |
R7590 |
T11413 |
T11412 |
aux |
may,facilitated |
R7591 |
T11414 |
T11412 |
auxpass |
be,facilitated |
R7592 |
T11415 |
T11412 |
prep |
by,facilitated |
R7593 |
T11416 |
T11415 |
pobj |
binding,by |
R7594 |
T11417 |
T11416 |
prep |
of,binding |
R7595 |
T11418 |
T11419 |
compound |
preRC,components |
R7596 |
T11419 |
T11417 |
pobj |
components,of |
R7597 |
T11420 |
T11416 |
prep |
in,binding |
R7598 |
T11421 |
T11422 |
det |
the,context |
R7599 |
T11422 |
T11420 |
pobj |
context,in |
R7600 |
T11423 |
T11422 |
prep |
of,context |
R7601 |
T11424 |
T11425 |
amod |
proper,structures |
R7602 |
T11425 |
T11423 |
pobj |
structures,of |
R7603 |
T11426 |
T11425 |
compound |
chromatin,structures |
R7604 |
T11427 |
T11415 |
punct |
", ",by |
R7605 |
T11428 |
T11415 |
cc |
or,by |
R7606 |
T11429 |
T11415 |
conj |
by,by |
R7607 |
T11430 |
T11431 |
amod |
other,factors |
R7608 |
T11431 |
T11429 |
pobj |
factors,by |
R7609 |
T11432 |
T11431 |
amod |
unwinding,factors |
R7610 |
T11433 |
T11431 |
prep |
including,factors |
R7611 |
T11434 |
T11435 |
det |
a,topoisomerase |
R7612 |
T11435 |
T11433 |
pobj |
topoisomerase,including |
R7613 |
T11436 |
T11435 |
cc |
or,topoisomerase |
R7614 |
T11437 |
T11438 |
det |
a,helicase |
R7615 |
T11438 |
T11435 |
conj |
helicase,topoisomerase |
R7616 |
T11439 |
T11440 |
advmod |
newly,identified |
R7617 |
T11440 |
T11438 |
amod |
identified,helicase |
R7618 |
T11441 |
T11438 |
compound |
Mcm8,helicase |
R7619 |
T11442 |
T11443 |
punct |
(,34 |
R7620 |
T11443 |
T11404 |
parataxis |
34,involve |
R7621 |
T11444 |
T11445 |
punct |
–,36 |
R7622 |
T11445 |
T11443 |
prep |
36,34 |
R7623 |
T11446 |
T11443 |
punct |
),34 |
R7624 |
T11447 |
T11404 |
punct |
.,involve |
R7625 |
T11449 |
T11450 |
nsubj |
It,require |
R7626 |
T11451 |
T11450 |
aux |
may,require |
R7627 |
T11452 |
T11450 |
advmod |
also,require |
R7628 |
T11453 |
T11450 |
dobj |
association,require |
R7629 |
T11454 |
T11453 |
prep |
of,association |
R7630 |
T11455 |
T11456 |
npadvmod |
fork,assisting |
R7631 |
T11456 |
T11458 |
amod |
assisting,proteins |
R7632 |
T11457 |
T11456 |
punct |
-,assisting |
R7633 |
T11458 |
T11454 |
pobj |
proteins,of |
R7634 |
T11459 |
T11460 |
amod |
such,as |
R7635 |
T11460 |
T11458 |
prep |
as,proteins |
R7636 |
T11461 |
T11460 |
pobj |
Cdc45,as |
R7637 |
T11462 |
T11463 |
punct |
(,38 |
R7638 |
T11463 |
T11461 |
parataxis |
38,Cdc45 |
R7639 |
T11464 |
T11463 |
nummod |
37,38 |
R7640 |
T11465 |
T11463 |
punct |
",",38 |
R7641 |
T11466 |
T11463 |
punct |
),38 |
R7642 |
T11467 |
T11468 |
advmod |
as,as |
R7643 |
T11468 |
T11458 |
cc |
as,proteins |
R7644 |
T11469 |
T11468 |
advmod |
well,as |
R7645 |
T11470 |
T11471 |
compound |
phosphorylation,events |
R7646 |
T11471 |
T11458 |
conj |
events,proteins |
R7647 |
T11472 |
T11471 |
prep |
by,events |
R7648 |
T11473 |
T11474 |
nmod |
Cdk,kinases |
R7649 |
T11474 |
T11472 |
pobj |
kinases,by |
R7650 |
T11475 |
T11473 |
cc |
and,Cdk |
R7651 |
T11476 |
T11473 |
conj |
Cdc7,Cdk |
R7652 |
T11477 |
T11478 |
punct |
(,40 |
R7653 |
T11478 |
T11474 |
parataxis |
40,kinases |
R7654 |
T11479 |
T11478 |
nummod |
39,40 |
R7655 |
T11480 |
T11478 |
punct |
",",40 |
R7656 |
T11481 |
T11478 |
punct |
),40 |
R7657 |
T11482 |
T11450 |
punct |
.,require |
R7658 |
T11484 |
T11485 |
nummod |
One,finding |
R7659 |
T11485 |
T11487 |
nsubj |
finding,is |
R7660 |
T11486 |
T11485 |
amod |
unexpected,finding |
R7661 |
T11488 |
T11485 |
prep |
of,finding |
R7662 |
T11489 |
T11490 |
det |
this,study |
R7663 |
T11490 |
T11488 |
pobj |
study,of |
R7664 |
T11491 |
T11492 |
amod |
low,activity |
R7665 |
T11492 |
T11487 |
attr |
activity,is |
R7666 |
T11493 |
T11492 |
compound |
helicase,activity |
R7667 |
T11494 |
T11492 |
prep |
of,activity |
R7668 |
T11495 |
T11494 |
pobj |
Mcm4,of |
R7669 |
T11496 |
T11495 |
punct |
/,Mcm4 |
R7670 |
T11497 |
T11495 |
nummod |
6,Mcm4 |
R7671 |
T11498 |
T11495 |
punct |
/,Mcm4 |
R7672 |
T11499 |
T11495 |
nummod |
7,Mcm4 |
R7673 |
T11500 |
T11492 |
prep |
on,activity |
R7674 |
T11501 |
T11502 |
npadvmod |
GC,rich |
R7675 |
T11502 |
T11504 |
amod |
rich,DNA |
R7676 |
T11503 |
T11502 |
punct |
-,rich |
R7677 |
T11504 |
T11500 |
pobj |
DNA,on |
R7678 |
T11505 |
T11504 |
compound |
duplex,DNA |
R7679 |
T11506 |
T11487 |
punct |
.,is |
R7680 |
T11508 |
T11509 |
nsubj |
This,indicates |
R7681 |
T11510 |
T11508 |
punct |
", ",This |
R7682 |
T11511 |
T11508 |
prep |
in,This |
R7683 |
T11512 |
T11511 |
pobj |
conjunction,in |
R7684 |
T11513 |
T11512 |
prep |
with,conjunction |
R7685 |
T11514 |
T11515 |
det |
the,processivity |
R7686 |
T11515 |
T11513 |
pobj |
processivity,with |
R7687 |
T11516 |
T11515 |
amod |
low,processivity |
R7688 |
T11517 |
T11515 |
prep |
of,processivity |
R7689 |
T11518 |
T11519 |
nmod |
Mcm4,helicase |
R7690 |
T11519 |
T11517 |
pobj |
helicase,of |
R7691 |
T11520 |
T11518 |
punct |
/,Mcm4 |
R7692 |
T11521 |
T11518 |
nummod |
6,Mcm4 |
R7693 |
T11522 |
T11518 |
punct |
/,Mcm4 |
R7694 |
T11523 |
T11518 |
nummod |
7,Mcm4 |
R7695 |
T11524 |
T11509 |
punct |
", ",indicates |
R7696 |
T11525 |
T11509 |
advmod |
strongly,indicates |
R7697 |
T11526 |
T11527 |
mark |
that,require |
R7698 |
T11527 |
T11509 |
ccomp |
require,indicates |
R7699 |
T11528 |
T11529 |
det |
the,helicase |
R7700 |
T11529 |
T11527 |
nsubj |
helicase,require |
R7701 |
T11530 |
T11529 |
amod |
replicative,helicase |
R7702 |
T11531 |
T11529 |
prep |
at,helicase |
R7703 |
T11532 |
T11533 |
det |
the,forks |
R7704 |
T11533 |
T11531 |
pobj |
forks,at |
R7705 |
T11534 |
T11533 |
compound |
replication,forks |
R7706 |
T11535 |
T11527 |
aux |
would,require |
R7707 |
T11536 |
T11527 |
dobj |
more,require |
R7708 |
T11537 |
T11536 |
prep |
than,more |
R7709 |
T11538 |
T11539 |
nmod |
Mcm4,complex |
R7710 |
T11539 |
T11537 |
pobj |
complex,than |
R7711 |
T11540 |
T11538 |
punct |
/,Mcm4 |
R7712 |
T11541 |
T11538 |
nummod |
6,Mcm4 |
R7713 |
T11542 |
T11538 |
punct |
/,Mcm4 |
R7714 |
T11543 |
T11538 |
nummod |
7,Mcm4 |
R7715 |
T11544 |
T11509 |
punct |
.,indicates |
R7716 |
T11546 |
T11547 |
prep |
During,stimulated |
R7717 |
T11548 |
T11549 |
det |
the,unwinding |
R7718 |
T11549 |
T11546 |
pobj |
unwinding,During |
R7719 |
T11550 |
T11549 |
amod |
processive,unwinding |
R7720 |
T11551 |
T11549 |
prep |
of,unwinding |
R7721 |
T11552 |
T11553 |
compound |
duplex,forks |
R7722 |
T11553 |
T11551 |
pobj |
forks,of |
R7723 |
T11554 |
T11553 |
compound |
DNA,forks |
R7724 |
T11555 |
T11553 |
compound |
replication,forks |
R7725 |
T11556 |
T11547 |
punct |
", ",stimulated |
R7726 |
T11557 |
T11547 |
nsubjpass |
Mcm4,stimulated |
R7727 |
T11558 |
T11557 |
punct |
/,Mcm4 |
R7728 |
T11559 |
T11557 |
nummod |
6,Mcm4 |
R7729 |
T11560 |
T11557 |
punct |
/,Mcm4 |
R7730 |
T11561 |
T11557 |
nummod |
7,Mcm4 |
R7731 |
T11562 |
T11547 |
aux |
may,stimulated |
R7732 |
T11563 |
T11547 |
auxpass |
be,stimulated |
R7733 |
T11564 |
T11547 |
advmod |
further,stimulated |
R7734 |
T11565 |
T11547 |
agent |
by,stimulated |
R7735 |
T11566 |
T11565 |
pobj |
interaction,by |
R7736 |
T11567 |
T11566 |
prep |
with,interaction |
R7737 |
T11568 |
T11569 |
amod |
other,proteins |
R7738 |
T11569 |
T11567 |
pobj |
proteins,with |
R7739 |
T11570 |
T11569 |
punct |
", ",proteins |
R7740 |
T11571 |
T11569 |
prep |
including,proteins |
R7741 |
T11572 |
T11573 |
amod |
remaining,subunits |
R7742 |
T11573 |
T11571 |
pobj |
subunits,including |
R7743 |
T11574 |
T11573 |
compound |
Mcm,subunits |
R7744 |
T11575 |
T11573 |
punct |
", ",subunits |
R7745 |
T11576 |
T11573 |
conj |
Cdc45,subunits |
R7746 |
T11577 |
T11578 |
punct |
(,38 |
R7747 |
T11578 |
T11576 |
parataxis |
38,Cdc45 |
R7748 |
T11579 |
T11578 |
nummod |
37,38 |
R7749 |
T11580 |
T11578 |
punct |
",",38 |
R7750 |
T11581 |
T11578 |
punct |
),38 |
R7751 |
T11582 |
T11576 |
punct |
", ",Cdc45 |
R7752 |
T11583 |
T11576 |
conj |
GINS,Cdc45 |
R7753 |
T11584 |
T11585 |
punct |
(,42 |
R7754 |
T11585 |
T11583 |
parataxis |
42,GINS |
R7755 |
T11586 |
T11585 |
nummod |
41,42 |
R7756 |
T11587 |
T11585 |
punct |
",",42 |
R7757 |
T11588 |
T11585 |
punct |
),42 |
R7758 |
T11589 |
T11583 |
punct |
", ",GINS |
R7759 |
T11590 |
T11591 |
compound |
DNA,subunits |
R7760 |
T11591 |
T11583 |
conj |
subunits,GINS |
R7761 |
T11592 |
T11591 |
compound |
polymerase,subunits |
R7762 |
T11593 |
T11594 |
punct |
(,43 |
R7763 |
T11594 |
T11591 |
parataxis |
43,subunits |
R7764 |
T11595 |
T11594 |
punct |
),43 |
R7765 |
T11596 |
T11591 |
punct |
", ",subunits |
R7766 |
T11597 |
T11591 |
conj |
Mcm8,subunits |
R7767 |
T11598 |
T11599 |
punct |
(,36 |
R7768 |
T11599 |
T11597 |
parataxis |
36,Mcm8 |
R7769 |
T11600 |
T11599 |
nummod |
35,36 |
R7770 |
T11601 |
T11599 |
punct |
",",36 |
R7771 |
T11602 |
T11599 |
punct |
),36 |
R7772 |
T11603 |
T11597 |
punct |
", ",Mcm8 |
R7773 |
T11604 |
T11597 |
conj |
etc.,Mcm8 |
R7774 |
T11605 |
T11606 |
aux |
to,become |
R7775 |
T11606 |
T11547 |
advcl |
become,stimulated |
R7776 |
T11607 |
T11608 |
det |
a,helicase |
R7777 |
T11608 |
T11606 |
attr |
helicase,become |
R7778 |
T11609 |
T11610 |
advmod |
truly,processive |
R7779 |
T11610 |
T11608 |
amod |
processive,helicase |
R7780 |
T11611 |
T11610 |
cc |
and,processive |
R7781 |
T11612 |
T11610 |
conj |
potent,processive |
R7782 |
T11613 |
T11608 |
amod |
capable,helicase |
R7783 |
T11614 |
T11613 |
prep |
of,capable |
R7784 |
T11615 |
T11614 |
pcomp |
replicating,of |
R7785 |
T11616 |
T11617 |
det |
the,genome |
R7786 |
T11617 |
T11615 |
dobj |
genome,replicating |
R7787 |
T11618 |
T11617 |
amod |
entire,genome |
R7788 |
T11619 |
T11547 |
punct |
.,stimulated |