Id |
Subject |
Object |
Predicate |
Lexical cue |
T34077 |
0-1 |
DT |
denotes |
A |
T34079 |
2-5 |
NN |
denotes |
BAC |
T34080 |
6-13 |
JJ |
denotes |
genomic |
T34078 |
14-19 |
NN |
denotes |
clone |
T34082 |
20-30 |
VBG |
denotes |
containing |
T34083 |
31-34 |
DT |
denotes |
the |
T34085 |
35-41 |
JJ |
denotes |
murine |
T34086 |
42-45 |
NN |
denotes |
PGC |
T34088 |
45-46 |
HYPH |
denotes |
- |
T34087 |
46-48 |
NN |
denotes |
1α |
T34084 |
49-53 |
NN |
denotes |
gene |
T34089 |
53-55 |
, |
denotes |
, |
T34090 |
55-63 |
VBN |
denotes |
isolated |
T34091 |
64-68 |
IN |
denotes |
from |
T34092 |
69-71 |
DT |
denotes |
an |
T34094 |
72-77 |
NN |
denotes |
Sv129 |
T34095 |
78-85 |
JJ |
denotes |
genomic |
T34093 |
86-93 |
NN |
denotes |
library |
T34096 |
93-95 |
, |
denotes |
, |
T34097 |
95-98 |
VBD |
denotes |
was |
T34081 |
99-107 |
VBN |
denotes |
obtained |
T34098 |
108-112 |
IN |
denotes |
from |
T34099 |
113-119 |
NNP |
denotes |
Incyte |
T34100 |
120-128 |
NNP |
denotes |
Genomics |
T34101 |
129-130 |
-LRB- |
denotes |
( |
T34103 |
130-134 |
NNP |
denotes |
Palo |
T34102 |
135-139 |
NNP |
denotes |
Alto |
T34104 |
139-141 |
, |
denotes |
, |
T34105 |
141-151 |
NNP |
denotes |
California |
T34106 |
151-153 |
, |
denotes |
, |
T34107 |
153-159 |
NNP |
denotes |
United |
T34108 |
160-166 |
NNP |
denotes |
States |
T34109 |
166-167 |
-RRB- |
denotes |
) |
T34110 |
167-168 |
. |
denotes |
. |
T34111 |
168-236 |
sentence |
denotes |
A 3-kb region spanning exon 3 was amplified from the genomic clone. |
T34112 |
169-170 |
DT |
denotes |
A |
T34114 |
171-172 |
CD |
denotes |
3 |
T34116 |
172-173 |
HYPH |
denotes |
- |
T34115 |
173-175 |
NN |
denotes |
kb |
T34113 |
176-182 |
NN |
denotes |
region |
T34118 |
183-191 |
VBG |
denotes |
spanning |
T34119 |
192-196 |
NN |
denotes |
exon |
T34120 |
197-198 |
CD |
denotes |
3 |
T34121 |
199-202 |
VBD |
denotes |
was |
T34117 |
203-212 |
VBN |
denotes |
amplified |
T34122 |
213-217 |
IN |
denotes |
from |
T34123 |
218-221 |
DT |
denotes |
the |
T34125 |
222-229 |
JJ |
denotes |
genomic |
T34124 |
230-235 |
NN |
denotes |
clone |
T34126 |
235-236 |
. |
denotes |
. |
T34127 |
236-420 |
sentence |
denotes |
A 5′ primer was designed to amplify a fragment with the 5′ end beginning 732 bp upstream of exon 3 just upstream of an endogenous Kpn1 restriction site (5′- AGTTTCCTTAGCAACTTCATA-3′). |
T34128 |
237-238 |
DT |
denotes |
A |
T34130 |
239-240 |
CD |
denotes |
5 |
T34131 |
240-241 |
SYM |
denotes |
′ |
T34129 |
242-248 |
NN |
denotes |
primer |
T34133 |
249-252 |
VBD |
denotes |
was |
T34132 |
253-261 |
VBN |
denotes |
designed |
T34134 |
262-264 |
TO |
denotes |
to |
T34135 |
265-272 |
VB |
denotes |
amplify |
T34136 |
273-274 |
DT |
denotes |
a |
T34137 |
275-283 |
NN |
denotes |
fragment |
T34138 |
284-288 |
IN |
denotes |
with |
T34139 |
289-292 |
DT |
denotes |
the |
T34141 |
293-294 |
CD |
denotes |
5 |
T34142 |
294-295 |
SYM |
denotes |
′ |
T34140 |
296-299 |
NN |
denotes |
end |
T34143 |
300-309 |
VBG |
denotes |
beginning |
T34144 |
310-313 |
CD |
denotes |
732 |
T34145 |
314-316 |
NN |
denotes |
bp |
T34146 |
317-325 |
RB |
denotes |
upstream |
T34147 |
326-328 |
IN |
denotes |
of |
T34148 |
329-333 |
NN |
denotes |
exon |
T34149 |
334-335 |
CD |
denotes |
3 |
T34150 |
336-340 |
RB |
denotes |
just |
T34151 |
341-349 |
RB |
denotes |
upstream |
T34152 |
350-352 |
IN |
denotes |
of |
T34153 |
353-355 |
DT |
denotes |
an |
T34155 |
356-366 |
JJ |
denotes |
endogenous |
T34156 |
367-371 |
NN |
denotes |
Kpn1 |
T34157 |
372-383 |
NN |
denotes |
restriction |
T34154 |
384-388 |
NN |
denotes |
site |
T34158 |
389-390 |
-LRB- |
denotes |
( |
T34160 |
390-391 |
CD |
denotes |
5 |
T34161 |
391-392 |
SYM |
denotes |
′ |
T34162 |
392-393 |
HYPH |
denotes |
- |
T34159 |
394-415 |
NN |
denotes |
AGTTTCCTTAGCAACTTCATA |
T34163 |
415-416 |
HYPH |
denotes |
- |
T34164 |
416-417 |
CD |
denotes |
3 |
T34165 |
417-418 |
SYM |
denotes |
′ |
T34166 |
418-419 |
-RRB- |
denotes |
) |
T34167 |
419-420 |
. |
denotes |
. |
T34168 |
420-543 |
sentence |
denotes |
The 3′ primer contained a BamH1 site engineered by mutating the bases shown in lowercase (5′- AAGGATTTTAgGATcc CAGTAC-3′). |
T34169 |
421-424 |
DT |
denotes |
The |
T34171 |
425-426 |
CD |
denotes |
3 |
T34172 |
426-427 |
SYM |
denotes |
′ |
T34170 |
428-434 |
NN |
denotes |
primer |
T34173 |
435-444 |
VBD |
denotes |
contained |
T34174 |
445-446 |
DT |
denotes |
a |
T34176 |
447-452 |
NN |
denotes |
BamH1 |
T34175 |
453-457 |
NN |
denotes |
site |
T34177 |
458-468 |
VBN |
denotes |
engineered |
T34178 |
469-471 |
IN |
denotes |
by |
T34179 |
472-480 |
VBG |
denotes |
mutating |
T34180 |
481-484 |
DT |
denotes |
the |
T34181 |
485-490 |
NNS |
denotes |
bases |
T34182 |
491-496 |
VBN |
denotes |
shown |
T34183 |
497-499 |
IN |
denotes |
in |
T34184 |
500-509 |
NN |
denotes |
lowercase |
T34185 |
510-511 |
-LRB- |
denotes |
( |
T34187 |
511-512 |
CD |
denotes |
5 |
T34188 |
512-513 |
SYM |
denotes |
′ |
T34189 |
513-514 |
HYPH |
denotes |
- |
T34186 |
515-538 |
NN |
denotes |
AAGGATTTTAgGATcc CAGTAC |
T34190 |
538-539 |
HYPH |
denotes |
- |
T34191 |
539-540 |
CD |
denotes |
3 |
T34192 |
540-541 |
SYM |
denotes |
′ |
T34193 |
541-542 |
-RRB- |
denotes |
) |
T34194 |
542-543 |
. |
denotes |
. |
T34195 |
543-597 |
sentence |
denotes |
A second fragment downstream of exon 5 was amplified. |
T34196 |
544-545 |
DT |
denotes |
A |
T34198 |
546-552 |
JJ |
denotes |
second |
T34197 |
553-561 |
NN |
denotes |
fragment |
T34200 |
562-572 |
RB |
denotes |
downstream |
T34201 |
573-575 |
IN |
denotes |
of |
T34202 |
576-580 |
NN |
denotes |
exon |
T34203 |
581-582 |
CD |
denotes |
5 |
T34204 |
583-586 |
VBD |
denotes |
was |
T34199 |
587-596 |
VBN |
denotes |
amplified |
T34205 |
596-597 |
. |
denotes |
. |
T34206 |
597-766 |
sentence |
denotes |
In this latter amplicon, Not1 and Xho1 sites were engineered into the 5′ and 3′ primers, respectively (5′- TGGAGTgc GGCCGCTGGGA-3′ and 5′- AAAGAGTCTCgAg AATAGTTTCT-3′). |
T34207 |
598-600 |
IN |
denotes |
In |
T34209 |
601-605 |
DT |
denotes |
this |
T34211 |
606-612 |
JJ |
denotes |
latter |
T34210 |
613-621 |
NN |
denotes |
amplicon |
T34212 |
621-623 |
, |
denotes |
, |
T34213 |
623-627 |
NN |
denotes |
Not1 |
T34215 |
628-631 |
CC |
denotes |
and |
T34216 |
632-636 |
NN |
denotes |
Xho1 |
T34214 |
637-642 |
NNS |
denotes |
sites |
T34217 |
643-647 |
VBD |
denotes |
were |
T34208 |
648-658 |
VBN |
denotes |
engineered |
T34218 |
659-663 |
IN |
denotes |
into |
T34219 |
664-667 |
DT |
denotes |
the |
T34220 |
668-669 |
CD |
denotes |
5 |
T34222 |
669-670 |
SYM |
denotes |
′ |
T34223 |
671-674 |
CC |
denotes |
and |
T34224 |
675-676 |
CD |
denotes |
3 |
T34225 |
676-677 |
SYM |
denotes |
′ |
T34221 |
678-685 |
NNS |
denotes |
primers |
T34226 |
685-687 |
, |
denotes |
, |
T34227 |
687-699 |
RB |
denotes |
respectively |
T34228 |
700-701 |
-LRB- |
denotes |
( |
T34230 |
701-702 |
CD |
denotes |
5 |
T34231 |
702-703 |
SYM |
denotes |
′ |
T34232 |
703-704 |
HYPH |
denotes |
- |
T34229 |
705-725 |
NN |
denotes |
TGGAGTgc GGCCGCTGGGA |
T34233 |
725-726 |
HYPH |
denotes |
- |
T34234 |
726-727 |
CD |
denotes |
3 |
T34235 |
727-728 |
SYM |
denotes |
′ |
T34236 |
729-732 |
CC |
denotes |
and |
T34237 |
733-734 |
CD |
denotes |
5 |
T34239 |
734-735 |
SYM |
denotes |
′ |
T34240 |
735-736 |
HYPH |
denotes |
- |
T34238 |
737-761 |
NN |
denotes |
AAAGAGTCTCgAg AATAGTTTCT |
T34241 |
761-762 |
HYPH |
denotes |
- |
T34242 |
762-763 |
CD |
denotes |
3 |
T34243 |
763-764 |
SYM |
denotes |
′ |
T34244 |
764-765 |
-RRB- |
denotes |
) |
T34245 |
765-766 |
. |
denotes |
. |
T34246 |
766-834 |
sentence |
denotes |
The fragments were cloned into p1339-PGK-Neomycin targeting vector. |
T34247 |
767-770 |
DT |
denotes |
The |
T34248 |
771-780 |
NNS |
denotes |
fragments |
T34250 |
781-785 |
VBD |
denotes |
were |
T34249 |
786-792 |
VBN |
denotes |
cloned |
T34251 |
793-797 |
IN |
denotes |
into |
T34252 |
798-803 |
NN |
denotes |
p1339 |
T34254 |
803-804 |
HYPH |
denotes |
- |
T34255 |
804-807 |
NN |
denotes |
PGK |
T34256 |
807-808 |
HYPH |
denotes |
- |
T34253 |
808-816 |
NN |
denotes |
Neomycin |
T34258 |
817-826 |
NN |
denotes |
targeting |
T34257 |
827-833 |
NN |
denotes |
vector |
T34259 |
833-834 |
. |
denotes |
. |
T34260 |
834-948 |
sentence |
denotes |
The construct was linearized with Xho1 and electroporated into RW4 ES cells (Sv129 derived) using G418 selection. |
T34261 |
835-838 |
DT |
denotes |
The |
T34262 |
839-848 |
NN |
denotes |
construct |
T34264 |
849-852 |
VBD |
denotes |
was |
T34263 |
853-863 |
VBN |
denotes |
linearized |
T34265 |
864-868 |
IN |
denotes |
with |
T34266 |
869-873 |
NN |
denotes |
Xho1 |
T34267 |
874-877 |
CC |
denotes |
and |
T34268 |
878-892 |
VBN |
denotes |
electroporated |
T34269 |
893-897 |
IN |
denotes |
into |
T34270 |
898-901 |
NN |
denotes |
RW4 |
T34272 |
902-904 |
NN |
denotes |
ES |
T34271 |
905-910 |
NNS |
denotes |
cells |
T34273 |
911-912 |
-LRB- |
denotes |
( |
T34274 |
912-917 |
NN |
denotes |
Sv129 |
T34275 |
918-925 |
VBN |
denotes |
derived |
T34276 |
925-926 |
-RRB- |
denotes |
) |
T34277 |
927-932 |
VBG |
denotes |
using |
T34278 |
933-937 |
NN |
denotes |
G418 |
T34279 |
938-947 |
NN |
denotes |
selection |
T34280 |
947-948 |
. |
denotes |
. |
T34281 |
948-1087 |
sentence |
denotes |
The electroporation was performed by the Siteman Cancer Center ES Cell Core at Washington University (St. Louis, Missouri, United States). |
T34282 |
949-952 |
DT |
denotes |
The |
T34283 |
953-968 |
NN |
denotes |
electroporation |
T34285 |
969-972 |
VBD |
denotes |
was |
T34284 |
973-982 |
VBN |
denotes |
performed |
T34286 |
983-985 |
IN |
denotes |
by |
T34287 |
986-989 |
DT |
denotes |
the |
T34289 |
990-997 |
NNP |
denotes |
Siteman |
T34291 |
998-1004 |
NNP |
denotes |
Cancer |
T34290 |
1005-1011 |
NNP |
denotes |
Center |
T34292 |
1012-1014 |
NNP |
denotes |
ES |
T34293 |
1015-1019 |
NNP |
denotes |
Cell |
T34288 |
1020-1024 |
NNP |
denotes |
Core |
T34294 |
1025-1027 |
IN |
denotes |
at |
T34295 |
1028-1038 |
NNP |
denotes |
Washington |
T34296 |
1039-1049 |
NNP |
denotes |
University |
T34297 |
1050-1051 |
-LRB- |
denotes |
( |
T34299 |
1051-1054 |
NNP |
denotes |
St. |
T34298 |
1055-1060 |
NNP |
denotes |
Louis |
T34300 |
1060-1062 |
, |
denotes |
, |
T34301 |
1062-1070 |
NNP |
denotes |
Missouri |
T34302 |
1070-1072 |
, |
denotes |
, |
T34303 |
1072-1078 |
NNP |
denotes |
United |
T34304 |
1079-1085 |
NNP |
denotes |
States |
T34305 |
1085-1086 |
-RRB- |
denotes |
) |
T34306 |
1086-1087 |
. |
denotes |
. |
T34307 |
1087-1174 |
sentence |
denotes |
The clones were screened by Southern blot using an Xba1 digest (see Figure 1A and 1B). |
T34308 |
1088-1091 |
DT |
denotes |
The |
T34309 |
1092-1098 |
NNS |
denotes |
clones |
T34311 |
1099-1103 |
VBD |
denotes |
were |
T34310 |
1104-1112 |
VBN |
denotes |
screened |
T34312 |
1113-1115 |
IN |
denotes |
by |
T34313 |
1116-1124 |
NNP |
denotes |
Southern |
T34314 |
1125-1129 |
NN |
denotes |
blot |
T34315 |
1130-1135 |
VBG |
denotes |
using |
T34316 |
1136-1138 |
DT |
denotes |
an |
T34318 |
1139-1143 |
NN |
denotes |
Xba1 |
T34317 |
1144-1150 |
NN |
denotes |
digest |
T34319 |
1151-1152 |
-LRB- |
denotes |
( |
T34320 |
1152-1155 |
VB |
denotes |
see |
T34321 |
1156-1162 |
NN |
denotes |
Figure |
T34322 |
1163-1165 |
NN |
denotes |
1A |
T34323 |
1166-1169 |
CC |
denotes |
and |
T34324 |
1170-1172 |
NN |
denotes |
1B |
T34325 |
1172-1173 |
-RRB- |
denotes |
) |
T34326 |
1173-1174 |
. |
denotes |
. |
T34327 |
1174-1310 |
sentence |
denotes |
One clone out of approximately 400 screened was positive for the homologous recombination on the 3′ end and an insertion on the 5′ end. |
T34328 |
1175-1178 |
CD |
denotes |
One |
T34329 |
1179-1184 |
NN |
denotes |
clone |
T34331 |
1185-1188 |
IN |
denotes |
out |
T34332 |
1189-1191 |
IN |
denotes |
of |
T34333 |
1192-1205 |
RB |
denotes |
approximately |
T34334 |
1206-1209 |
CD |
denotes |
400 |
T34335 |
1210-1218 |
VBN |
denotes |
screened |
T34330 |
1219-1222 |
VBD |
denotes |
was |
T34336 |
1223-1231 |
JJ |
denotes |
positive |
T34337 |
1232-1235 |
IN |
denotes |
for |
T34338 |
1236-1239 |
DT |
denotes |
the |
T34340 |
1240-1250 |
JJ |
denotes |
homologous |
T34339 |
1251-1264 |
NN |
denotes |
recombination |
T34341 |
1265-1267 |
IN |
denotes |
on |
T34342 |
1268-1271 |
DT |
denotes |
the |
T34344 |
1272-1273 |
CD |
denotes |
3 |
T34345 |
1273-1274 |
SYM |
denotes |
′ |
T34343 |
1275-1278 |
NN |
denotes |
end |
T34346 |
1279-1282 |
CC |
denotes |
and |
T34347 |
1283-1285 |
DT |
denotes |
an |
T34348 |
1286-1295 |
NN |
denotes |
insertion |
T34349 |
1296-1298 |
IN |
denotes |
on |
T34350 |
1299-1302 |
DT |
denotes |
the |
T34352 |
1303-1304 |
CD |
denotes |
5 |
T34353 |
1304-1305 |
SYM |
denotes |
′ |
T34351 |
1306-1309 |
NN |
denotes |
end |
T34354 |
1309-1310 |
. |
denotes |
. |
T34355 |
1310-1362 |
sentence |
denotes |
This clone was injected into a C57BL6/J blastocyst. |
T34356 |
1311-1315 |
DT |
denotes |
This |
T34357 |
1316-1321 |
NN |
denotes |
clone |
T34359 |
1322-1325 |
VBD |
denotes |
was |
T34358 |
1326-1334 |
VBN |
denotes |
injected |
T34360 |
1335-1339 |
IN |
denotes |
into |
T34361 |
1340-1341 |
DT |
denotes |
a |
T34363 |
1342-1348 |
NN |
denotes |
C57BL6 |
T34365 |
1348-1349 |
HYPH |
denotes |
/ |
T34364 |
1349-1350 |
NN |
denotes |
J |
T34362 |
1351-1361 |
NN |
denotes |
blastocyst |
T34366 |
1361-1362 |
. |
denotes |
. |
T34367 |
1362-1489 |
sentence |
denotes |
Chimeras were mated to C57BL6/J mice and germline transmission was confirmed by Southern blotting of tail DNA (see Figure 1B). |
T34368 |
1363-1371 |
NNS |
denotes |
Chimeras |
T34370 |
1372-1376 |
VBD |
denotes |
were |
T34369 |
1377-1382 |
VBN |
denotes |
mated |
T34371 |
1383-1385 |
IN |
denotes |
to |
T34372 |
1386-1392 |
NN |
denotes |
C57BL6 |
T34374 |
1392-1393 |
HYPH |
denotes |
/ |
T34373 |
1393-1394 |
NN |
denotes |
J |
T34375 |
1395-1399 |
NNS |
denotes |
mice |
T34376 |
1400-1403 |
CC |
denotes |
and |
T34377 |
1404-1412 |
NN |
denotes |
germline |
T34378 |
1413-1425 |
NN |
denotes |
transmission |
T34380 |
1426-1429 |
VBD |
denotes |
was |
T34379 |
1430-1439 |
VBN |
denotes |
confirmed |
T34381 |
1440-1442 |
IN |
denotes |
by |
T34382 |
1443-1451 |
NNP |
denotes |
Southern |
T34383 |
1452-1460 |
NN |
denotes |
blotting |
T34384 |
1461-1463 |
IN |
denotes |
of |
T34385 |
1464-1468 |
NN |
denotes |
tail |
T34386 |
1469-1472 |
NN |
denotes |
DNA |
T34387 |
1473-1474 |
-LRB- |
denotes |
( |
T34388 |
1474-1477 |
VB |
denotes |
see |
T34389 |
1478-1484 |
NN |
denotes |
Figure |
T34390 |
1485-1487 |
NN |
denotes |
1B |
T34391 |
1487-1488 |
-RRB- |
denotes |
) |
T34392 |
1488-1489 |
. |
denotes |
. |
T34393 |
1489-1580 |
sentence |
denotes |
All experiments were performed using sex- and age-matched or littermate controls as noted. |
T34394 |
1490-1493 |
DT |
denotes |
All |
T34395 |
1494-1505 |
NNS |
denotes |
experiments |
T34397 |
1506-1510 |
VBD |
denotes |
were |
T34396 |
1511-1520 |
VBN |
denotes |
performed |
T34398 |
1521-1526 |
VBG |
denotes |
using |
T34399 |
1527-1530 |
NN |
denotes |
sex |
T34401 |
1530-1531 |
HYPH |
denotes |
- |
T34402 |
1532-1535 |
CC |
denotes |
and |
T34403 |
1536-1539 |
NN |
denotes |
age |
T34404 |
1539-1540 |
HYPH |
denotes |
- |
T34400 |
1540-1547 |
VBN |
denotes |
matched |
T34406 |
1548-1550 |
CC |
denotes |
or |
T34407 |
1551-1561 |
NN |
denotes |
littermate |
T34405 |
1562-1570 |
NNS |
denotes |
controls |
T34408 |
1571-1573 |
IN |
denotes |
as |
T34409 |
1574-1579 |
VBN |
denotes |
noted |
T34410 |
1579-1580 |
. |
denotes |
. |
R8694 |
T34077 |
T34078 |
det |
A,clone |
R8695 |
T34078 |
T34081 |
nsubjpass |
clone,obtained |
R8696 |
T34079 |
T34078 |
nmod |
BAC,clone |
R8697 |
T34080 |
T34078 |
amod |
genomic,clone |
R8698 |
T34082 |
T34078 |
acl |
containing,clone |
R8699 |
T34083 |
T34084 |
det |
the,gene |
R8700 |
T34084 |
T34082 |
dobj |
gene,containing |
R8701 |
T34085 |
T34084 |
amod |
murine,gene |
R8702 |
T34086 |
T34087 |
compound |
PGC,1α |
R8703 |
T34087 |
T34084 |
compound |
1α,gene |
R8704 |
T34088 |
T34087 |
punct |
-,1α |
R8705 |
T34089 |
T34084 |
punct |
", ",gene |
R8706 |
T34090 |
T34084 |
acl |
isolated,gene |
R8707 |
T34091 |
T34090 |
prep |
from,isolated |
R8708 |
T34092 |
T34093 |
det |
an,library |
R8709 |
T34093 |
T34091 |
pobj |
library,from |
R8710 |
T34094 |
T34093 |
nmod |
Sv129,library |
R8711 |
T34095 |
T34093 |
amod |
genomic,library |
R8712 |
T34096 |
T34081 |
punct |
", ",obtained |
R8713 |
T34097 |
T34081 |
auxpass |
was,obtained |
R8714 |
T34098 |
T34081 |
prep |
from,obtained |
R8715 |
T34099 |
T34100 |
compound |
Incyte,Genomics |
R8716 |
T34100 |
T34098 |
pobj |
Genomics,from |
R8717 |
T34101 |
T34102 |
punct |
(,Alto |
R8718 |
T34102 |
T34100 |
parataxis |
Alto,Genomics |
R8719 |
T34103 |
T34102 |
compound |
Palo,Alto |
R8720 |
T34104 |
T34102 |
punct |
", ",Alto |
R8721 |
T34105 |
T34102 |
npadvmod |
California,Alto |
R8722 |
T34106 |
T34102 |
punct |
", ",Alto |
R8723 |
T34107 |
T34108 |
compound |
United,States |
R8724 |
T34108 |
T34102 |
npadvmod |
States,Alto |
R8725 |
T34109 |
T34102 |
punct |
),Alto |
R8726 |
T34110 |
T34081 |
punct |
.,obtained |
R8727 |
T34112 |
T34113 |
det |
A,region |
R8728 |
T34113 |
T34117 |
nsubjpass |
region,amplified |
R8729 |
T34114 |
T34115 |
nummod |
3,kb |
R8730 |
T34115 |
T34113 |
compound |
kb,region |
R8731 |
T34116 |
T34115 |
punct |
-,kb |
R8732 |
T34118 |
T34113 |
acl |
spanning,region |
R8733 |
T34119 |
T34118 |
dobj |
exon,spanning |
R8734 |
T34120 |
T34119 |
nummod |
3,exon |
R8735 |
T34121 |
T34117 |
auxpass |
was,amplified |
R8736 |
T34122 |
T34117 |
prep |
from,amplified |
R8737 |
T34123 |
T34124 |
det |
the,clone |
R8738 |
T34124 |
T34122 |
pobj |
clone,from |
R8739 |
T34125 |
T34124 |
amod |
genomic,clone |
R8740 |
T34126 |
T34117 |
punct |
.,amplified |
R8741 |
T34128 |
T34129 |
det |
A,primer |
R8742 |
T34129 |
T34132 |
nsubjpass |
primer,designed |
R8743 |
T34130 |
T34129 |
nummod |
5,primer |
R8744 |
T34131 |
T34130 |
punct |
′,5 |
R8745 |
T34133 |
T34132 |
auxpass |
was,designed |
R8746 |
T34134 |
T34135 |
aux |
to,amplify |
R8747 |
T34135 |
T34132 |
advcl |
amplify,designed |
R8748 |
T34136 |
T34137 |
det |
a,fragment |
R8749 |
T34137 |
T34135 |
dobj |
fragment,amplify |
R8750 |
T34138 |
T34137 |
prep |
with,fragment |
R8751 |
T34139 |
T34140 |
det |
the,end |
R8752 |
T34140 |
T34143 |
nsubj |
end,beginning |
R8753 |
T34141 |
T34140 |
nummod |
5,end |
R8754 |
T34142 |
T34141 |
punct |
′,5 |
R8755 |
T34143 |
T34138 |
pcomp |
beginning,with |
R8756 |
T34144 |
T34145 |
nummod |
732,bp |
R8757 |
T34145 |
T34146 |
npadvmod |
bp,upstream |
R8758 |
T34146 |
T34143 |
advmod |
upstream,beginning |
R8759 |
T34147 |
T34146 |
prep |
of,upstream |
R8760 |
T34148 |
T34147 |
pobj |
exon,of |
R8761 |
T34149 |
T34148 |
nummod |
3,exon |
R8762 |
T34150 |
T34151 |
advmod |
just,upstream |
R8763 |
T34151 |
T34143 |
advmod |
upstream,beginning |
R8764 |
T34152 |
T34151 |
prep |
of,upstream |
R8765 |
T34153 |
T34154 |
det |
an,site |
R8766 |
T34154 |
T34152 |
pobj |
site,of |
R8767 |
T34155 |
T34154 |
amod |
endogenous,site |
R8768 |
T34156 |
T34154 |
compound |
Kpn1,site |
R8769 |
T34157 |
T34154 |
compound |
restriction,site |
R8770 |
T34158 |
T34159 |
punct |
(,AGTTTCCTTAGCAACTTCATA |
R8771 |
T34159 |
T34154 |
parataxis |
AGTTTCCTTAGCAACTTCATA,site |
R8772 |
T34160 |
T34159 |
nummod |
5,AGTTTCCTTAGCAACTTCATA |
R8773 |
T34161 |
T34160 |
punct |
′,5 |
R8774 |
T34162 |
T34159 |
punct |
-,AGTTTCCTTAGCAACTTCATA |
R8775 |
T34163 |
T34159 |
punct |
-,AGTTTCCTTAGCAACTTCATA |
R8776 |
T34164 |
T34159 |
nummod |
3,AGTTTCCTTAGCAACTTCATA |
R8777 |
T34165 |
T34159 |
punct |
′,AGTTTCCTTAGCAACTTCATA |
R8778 |
T34166 |
T34159 |
punct |
),AGTTTCCTTAGCAACTTCATA |
R8779 |
T34167 |
T34132 |
punct |
.,designed |
R8780 |
T34169 |
T34170 |
det |
The,primer |
R8781 |
T34170 |
T34173 |
nsubj |
primer,contained |
R8782 |
T34171 |
T34170 |
nummod |
3,primer |
R8783 |
T34172 |
T34171 |
punct |
′,3 |
R8784 |
T34174 |
T34175 |
det |
a,site |
R8785 |
T34175 |
T34173 |
dobj |
site,contained |
R8786 |
T34176 |
T34175 |
compound |
BamH1,site |
R8787 |
T34177 |
T34175 |
acl |
engineered,site |
R8788 |
T34178 |
T34177 |
prep |
by,engineered |
R8789 |
T34179 |
T34178 |
pcomp |
mutating,by |
R8790 |
T34180 |
T34181 |
det |
the,bases |
R8791 |
T34181 |
T34179 |
dobj |
bases,mutating |
R8792 |
T34182 |
T34181 |
acl |
shown,bases |
R8793 |
T34183 |
T34182 |
prep |
in,shown |
R8794 |
T34184 |
T34183 |
pobj |
lowercase,in |
R8795 |
T34185 |
T34186 |
punct |
(,AAGGATTTTAgGATcc CAGTAC |
R8796 |
T34186 |
T34175 |
parataxis |
AAGGATTTTAgGATcc CAGTAC,site |
R8797 |
T34187 |
T34186 |
nummod |
5,AAGGATTTTAgGATcc CAGTAC |
R8798 |
T34188 |
T34187 |
punct |
′,5 |
R8799 |
T34189 |
T34186 |
punct |
-,AAGGATTTTAgGATcc CAGTAC |
R8800 |
T34190 |
T34186 |
punct |
-,AAGGATTTTAgGATcc CAGTAC |
R8801 |
T34191 |
T34186 |
nummod |
3,AAGGATTTTAgGATcc CAGTAC |
R8802 |
T34192 |
T34186 |
punct |
′,AAGGATTTTAgGATcc CAGTAC |
R8803 |
T34193 |
T34186 |
punct |
),AAGGATTTTAgGATcc CAGTAC |
R8804 |
T34194 |
T34173 |
punct |
.,contained |
R8805 |
T34196 |
T34197 |
det |
A,fragment |
R8806 |
T34197 |
T34199 |
nsubjpass |
fragment,amplified |
R8807 |
T34198 |
T34197 |
amod |
second,fragment |
R8808 |
T34200 |
T34197 |
advmod |
downstream,fragment |
R8809 |
T34201 |
T34200 |
prep |
of,downstream |
R8810 |
T34202 |
T34201 |
pobj |
exon,of |
R8811 |
T34203 |
T34202 |
nummod |
5,exon |
R8812 |
T34204 |
T34199 |
auxpass |
was,amplified |
R8813 |
T34205 |
T34199 |
punct |
.,amplified |
R8814 |
T34207 |
T34208 |
prep |
In,engineered |
R8815 |
T34209 |
T34210 |
det |
this,amplicon |
R8816 |
T34210 |
T34207 |
pobj |
amplicon,In |
R8817 |
T34211 |
T34210 |
amod |
latter,amplicon |
R8818 |
T34212 |
T34208 |
punct |
", ",engineered |
R8819 |
T34213 |
T34214 |
nmod |
Not1,sites |
R8820 |
T34214 |
T34208 |
nsubjpass |
sites,engineered |
R8821 |
T34215 |
T34213 |
cc |
and,Not1 |
R8822 |
T34216 |
T34213 |
conj |
Xho1,Not1 |
R8823 |
T34217 |
T34208 |
auxpass |
were,engineered |
R8824 |
T34218 |
T34208 |
prep |
into,engineered |
R8825 |
T34219 |
T34220 |
det |
the,5 |
R8826 |
T34220 |
T34221 |
nummod |
5,primers |
R8827 |
T34221 |
T34218 |
pobj |
primers,into |
R8828 |
T34222 |
T34220 |
punct |
′,5 |
R8829 |
T34223 |
T34220 |
cc |
and,5 |
R8830 |
T34224 |
T34220 |
conj |
3,5 |
R8831 |
T34225 |
T34224 |
punct |
′,3 |
R8832 |
T34226 |
T34208 |
punct |
", ",engineered |
R8833 |
T34227 |
T34208 |
advmod |
respectively,engineered |
R8834 |
T34228 |
T34229 |
punct |
(,TGGAGTgc GGCCGCTGGGA |
R8835 |
T34229 |
T34208 |
parataxis |
TGGAGTgc GGCCGCTGGGA,engineered |
R8836 |
T34230 |
T34229 |
nummod |
5,TGGAGTgc GGCCGCTGGGA |
R8837 |
T34231 |
T34230 |
punct |
′,5 |
R8838 |
T34232 |
T34229 |
punct |
-,TGGAGTgc GGCCGCTGGGA |
R8839 |
T34233 |
T34229 |
punct |
-,TGGAGTgc GGCCGCTGGGA |
R8840 |
T34234 |
T34229 |
nummod |
3,TGGAGTgc GGCCGCTGGGA |
R8841 |
T34235 |
T34229 |
punct |
′,TGGAGTgc GGCCGCTGGGA |
R8842 |
T34236 |
T34229 |
cc |
and,TGGAGTgc GGCCGCTGGGA |
R8843 |
T34237 |
T34238 |
nummod |
5,AAAGAGTCTCgAg AATAGTTTCT |
R8844 |
T34238 |
T34229 |
conj |
AAAGAGTCTCgAg AATAGTTTCT,TGGAGTgc GGCCGCTGGGA |
R8845 |
T34239 |
T34237 |
punct |
′,5 |
R8846 |
T34240 |
T34238 |
punct |
-,AAAGAGTCTCgAg AATAGTTTCT |
R8847 |
T34241 |
T34238 |
punct |
-,AAAGAGTCTCgAg AATAGTTTCT |
R8848 |
T34242 |
T34238 |
nummod |
3,AAAGAGTCTCgAg AATAGTTTCT |
R8849 |
T34243 |
T34238 |
punct |
′,AAAGAGTCTCgAg AATAGTTTCT |
R8850 |
T34244 |
T34229 |
punct |
),TGGAGTgc GGCCGCTGGGA |
R8851 |
T34245 |
T34208 |
punct |
.,engineered |
R8852 |
T34247 |
T34248 |
det |
The,fragments |
R8853 |
T34248 |
T34249 |
nsubjpass |
fragments,cloned |
R8854 |
T34250 |
T34249 |
auxpass |
were,cloned |
R8855 |
T34251 |
T34249 |
prep |
into,cloned |
R8856 |
T34252 |
T34253 |
compound |
p1339,Neomycin |
R8857 |
T34253 |
T34257 |
compound |
Neomycin,vector |
R8858 |
T34254 |
T34253 |
punct |
-,Neomycin |
R8859 |
T34255 |
T34253 |
compound |
PGK,Neomycin |
R8860 |
T34256 |
T34253 |
punct |
-,Neomycin |
R8861 |
T34257 |
T34251 |
pobj |
vector,into |
R8862 |
T34258 |
T34257 |
compound |
targeting,vector |
R8863 |
T34259 |
T34249 |
punct |
.,cloned |
R8864 |
T34261 |
T34262 |
det |
The,construct |
R8865 |
T34262 |
T34263 |
nsubjpass |
construct,linearized |
R8866 |
T34264 |
T34263 |
auxpass |
was,linearized |
R8867 |
T34265 |
T34263 |
prep |
with,linearized |
R8868 |
T34266 |
T34265 |
pobj |
Xho1,with |
R8869 |
T34267 |
T34263 |
cc |
and,linearized |
R8870 |
T34268 |
T34263 |
conj |
electroporated,linearized |
R8871 |
T34269 |
T34268 |
prep |
into,electroporated |
R8872 |
T34270 |
T34271 |
compound |
RW4,cells |
R8873 |
T34271 |
T34269 |
pobj |
cells,into |
R8874 |
T34272 |
T34271 |
compound |
ES,cells |
R8875 |
T34273 |
T34271 |
punct |
(,cells |
R8876 |
T34274 |
T34275 |
npadvmod |
Sv129,derived |
R8877 |
T34275 |
T34271 |
amod |
derived,cells |
R8878 |
T34276 |
T34268 |
punct |
),electroporated |
R8879 |
T34277 |
T34268 |
advcl |
using,electroporated |
R8880 |
T34278 |
T34279 |
compound |
G418,selection |
R8881 |
T34279 |
T34277 |
dobj |
selection,using |
R8882 |
T34280 |
T34263 |
punct |
.,linearized |
R8883 |
T34282 |
T34283 |
det |
The,electroporation |
R8884 |
T34283 |
T34284 |
nsubjpass |
electroporation,performed |
R8885 |
T34285 |
T34284 |
auxpass |
was,performed |
R8886 |
T34286 |
T34284 |
agent |
by,performed |
R8887 |
T34287 |
T34288 |
det |
the,Core |
R8888 |
T34288 |
T34286 |
pobj |
Core,by |
R8889 |
T34289 |
T34290 |
compound |
Siteman,Center |
R8890 |
T34290 |
T34288 |
compound |
Center,Core |
R8891 |
T34291 |
T34290 |
compound |
Cancer,Center |
R8892 |
T34292 |
T34293 |
compound |
ES,Cell |
R8893 |
T34293 |
T34288 |
compound |
Cell,Core |
R8894 |
T34294 |
T34288 |
prep |
at,Core |
R8895 |
T34295 |
T34296 |
compound |
Washington,University |
R8896 |
T34296 |
T34294 |
pobj |
University,at |
R8897 |
T34297 |
T34298 |
punct |
(,Louis |
R8898 |
T34298 |
T34296 |
parataxis |
Louis,University |
R8899 |
T34299 |
T34298 |
compound |
St.,Louis |
R8900 |
T34300 |
T34298 |
punct |
", ",Louis |
R8901 |
T34301 |
T34298 |
npadvmod |
Missouri,Louis |
R8902 |
T34302 |
T34298 |
punct |
", ",Louis |
R8903 |
T34303 |
T34304 |
compound |
United,States |
R8904 |
T34304 |
T34298 |
npadvmod |
States,Louis |
R8905 |
T34305 |
T34298 |
punct |
),Louis |
R8906 |
T34306 |
T34284 |
punct |
.,performed |
R8907 |
T34308 |
T34309 |
det |
The,clones |
R8908 |
T34309 |
T34310 |
nsubjpass |
clones,screened |
R8909 |
T34311 |
T34310 |
auxpass |
were,screened |
R8910 |
T34312 |
T34310 |
prep |
by,screened |
R8911 |
T34313 |
T34314 |
compound |
Southern,blot |
R8912 |
T34314 |
T34312 |
pobj |
blot,by |
R8913 |
T34315 |
T34310 |
advcl |
using,screened |
R8914 |
T34316 |
T34317 |
det |
an,digest |
R8915 |
T34317 |
T34315 |
dobj |
digest,using |
R8916 |
T34318 |
T34317 |
compound |
Xba1,digest |
R8917 |
T34319 |
T34320 |
punct |
(,see |
R8918 |
T34320 |
T34310 |
parataxis |
see,screened |
R8919 |
T34321 |
T34322 |
compound |
Figure,1A |
R8920 |
T34322 |
T34320 |
dobj |
1A,see |
R8921 |
T34323 |
T34322 |
cc |
and,1A |
R8922 |
T34324 |
T34322 |
conj |
1B,1A |
R8923 |
T34325 |
T34320 |
punct |
),see |
R8924 |
T34326 |
T34310 |
punct |
.,screened |
R8925 |
T34328 |
T34329 |
nummod |
One,clone |
R8926 |
T34329 |
T34330 |
nsubj |
clone,was |
R8927 |
T34331 |
T34329 |
prep |
out,clone |
R8928 |
T34332 |
T34331 |
prep |
of,out |
R8929 |
T34333 |
T34334 |
advmod |
approximately,400 |
R8930 |
T34334 |
T34332 |
pobj |
400,of |
R8931 |
T34335 |
T34334 |
acl |
screened,400 |
R8932 |
T34336 |
T34330 |
acomp |
positive,was |
R8933 |
T34337 |
T34336 |
prep |
for,positive |
R8934 |
T34338 |
T34339 |
det |
the,recombination |
R8935 |
T34339 |
T34337 |
pobj |
recombination,for |
R8936 |
T34340 |
T34339 |
amod |
homologous,recombination |
R8937 |
T34341 |
T34339 |
prep |
on,recombination |
R8938 |
T34342 |
T34343 |
det |
the,end |
R8939 |
T34343 |
T34341 |
pobj |
end,on |
R8940 |
T34344 |
T34343 |
nummod |
3,end |
R8941 |
T34345 |
T34344 |
punct |
′,3 |
R8942 |
T34346 |
T34339 |
cc |
and,recombination |
R8943 |
T34347 |
T34348 |
det |
an,insertion |
R8944 |
T34348 |
T34339 |
conj |
insertion,recombination |
R8945 |
T34349 |
T34348 |
prep |
on,insertion |
R8946 |
T34350 |
T34351 |
det |
the,end |
R8947 |
T34351 |
T34349 |
pobj |
end,on |
R8948 |
T34352 |
T34351 |
nummod |
5,end |
R8949 |
T34353 |
T34352 |
punct |
′,5 |
R8950 |
T34354 |
T34330 |
punct |
.,was |
R8951 |
T34356 |
T34357 |
det |
This,clone |
R8952 |
T34357 |
T34358 |
nsubjpass |
clone,injected |
R8953 |
T34359 |
T34358 |
auxpass |
was,injected |
R8954 |
T34360 |
T34358 |
prep |
into,injected |
R8955 |
T34361 |
T34362 |
det |
a,blastocyst |
R8956 |
T34362 |
T34360 |
pobj |
blastocyst,into |
R8957 |
T34363 |
T34364 |
compound |
C57BL6,J |
R8958 |
T34364 |
T34362 |
compound |
J,blastocyst |
R8959 |
T34365 |
T34364 |
punct |
/,J |
R8960 |
T34366 |
T34358 |
punct |
.,injected |
R8961 |
T34368 |
T34369 |
nsubjpass |
Chimeras,mated |
R8962 |
T34370 |
T34369 |
auxpass |
were,mated |
R8963 |
T34371 |
T34369 |
prep |
to,mated |
R8964 |
T34372 |
T34373 |
compound |
C57BL6,J |
R8965 |
T34373 |
T34375 |
compound |
J,mice |
R8966 |
T34374 |
T34373 |
punct |
/,J |
R8967 |
T34375 |
T34371 |
pobj |
mice,to |
R8968 |
T34376 |
T34369 |
cc |
and,mated |
R8969 |
T34377 |
T34378 |
compound |
germline,transmission |
R8970 |
T34378 |
T34379 |
nsubjpass |
transmission,confirmed |
R8971 |
T34379 |
T34369 |
conj |
confirmed,mated |
R8972 |
T34380 |
T34379 |
auxpass |
was,confirmed |
R8973 |
T34381 |
T34379 |
prep |
by,confirmed |
R8974 |
T34382 |
T34383 |
compound |
Southern,blotting |
R8975 |
T34383 |
T34381 |
pobj |
blotting,by |
R8976 |
T34384 |
T34383 |
prep |
of,blotting |
R8977 |
T34385 |
T34386 |
compound |
tail,DNA |
R8978 |
T34386 |
T34384 |
pobj |
DNA,of |
R8979 |
T34387 |
T34388 |
punct |
(,see |
R8980 |
T34388 |
T34379 |
parataxis |
see,confirmed |
R8981 |
T34389 |
T34390 |
compound |
Figure,1B |
R8982 |
T34390 |
T34388 |
dobj |
1B,see |
R8983 |
T34391 |
T34388 |
punct |
),see |
R8984 |
T34392 |
T34379 |
punct |
.,confirmed |
R8985 |
T34394 |
T34395 |
det |
All,experiments |
R8986 |
T34395 |
T34396 |
nsubjpass |
experiments,performed |
R8987 |
T34397 |
T34396 |
auxpass |
were,performed |
R8988 |
T34398 |
T34396 |
advcl |
using,performed |
R8989 |
T34399 |
T34400 |
npadvmod |
sex,matched |
R8990 |
T34400 |
T34405 |
amod |
matched,controls |
R8991 |
T34401 |
T34399 |
punct |
-,sex |
R8992 |
T34402 |
T34399 |
cc |
and,sex |
R8993 |
T34403 |
T34399 |
conj |
age,sex |
R8994 |
T34404 |
T34400 |
punct |
-,matched |
R8995 |
T34405 |
T34398 |
dobj |
controls,using |
R8996 |
T34406 |
T34400 |
cc |
or,matched |
R8997 |
T34407 |
T34400 |
conj |
littermate,matched |
R8998 |
T34408 |
T34409 |
mark |
as,noted |
R8999 |
T34409 |
T34396 |
advcl |
noted,performed |
R9000 |
T34410 |
T34396 |
punct |
.,performed |