PMC:523229 / 50539-60660 JSONTXT 5 Projects

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Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11192 14-18 PR_EXT:000000281 denotes Gdf5
T11193 23-33 SO_EXT:transgenic_entity denotes transgenic
T11194 34-38 NCBITaxon:10088 denotes mice
T11195 41-46 NCBITaxon:10088 denotes mouse
T11196 57-60 SO_EXT:0000153 denotes BAC
T11197 114-115 CHEBI_SO_EXT:base denotes b
T11198 116-119 SO_EXT:0000153 denotes BAC
T11199 129-133 PR_EXT:000000281 denotes Gdf5
T11200 146-149 SO_EXT:0000153 denotes BAC
T11201 154-162 SO_EXT:sequence_alteration_process denotes modified
T11202 182-195 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T11203 206-213 NCBITaxon:562 denotes E. coli
T11204 242-249 GO:0005634 denotes nuclear
T11205 250-259 GO_PATO_EXT:biological_localization_process_or_quality denotes localized
T11206 264-275 GO_EXT:recombinase denotes recombinase
T11207 282-289 SO_EXT:0000155 denotes plasmid
T11208 330-334 SO_EXT:0000243 denotes IRES
T11209 335-340 PR_EXT:P05187 denotes hPLAP
T11210 347-354 SO_EXT:0000155 denotes plasmid
T11211 404-418 SO_EXT:0000318 denotes ATG start site
T11212 422-426 PR_EXT:000000281 denotes Gdf5
T11213 448-450 SO_EXT:0000028 denotes bp
T11214 464-468 SO_EXT:0000147 denotes exon
T11215 472-476 PR_EXT:000000281 denotes Gdf5
T11216 507-511 PR_EXT:000000281 denotes GDF5
T11217 512-519 CHEBI_PR_EXT:protein denotes protein
T11218 590-601 SO_EXT:0000006 denotes PCR product
T11219 631-648 SO_EXT:0000061 denotes restriction sites
T11220 667-669 SO_EXT:0000028 denotes bp
T11221 676-683 SO_EXT:0001026 denotes genomic
T11222 684-688 PR_EXT:000000281 denotes Gdf5
T11223 689-697 SO_EXT:biological_sequence denotes sequence
T11224 712-738 SO_EXT:0000318 denotes ATG translation start site
T11225 716-733 GO:0006413 denotes translation start
T11226 740-754 SO_EXT:0000121 denotes forward primer
T11227 795-802 SO:0001031 denotes reverse
T11228 871-872 CHEBI_SO_EXT:base denotes b
T11229 906-910 SO_EXT:0000243 denotes IRES
T11230 911-916 PR_EXT:P05187 denotes hPLAP
T11231 943-944 CHEBI_SO_EXT:base denotes b
T11232 945-956 SO_EXT:0000006 denotes PCR product
T11233 1008-1013 PR_EXT:P05187 denotes hPLAP
T11234 1014-1030 GO:0006415 denotes translation stop
T11235 1014-1035 SO_EXT:0000319 denotes translation stop site
T11236 1037-1051 SO_EXT:0000121 denotes forward primer
T11237 1098-1105 SO:0001031 denotes reverse
T11238 1199-1200 CHEBI_SO_EXT:base denotes b
T11239 1201-1212 SO_EXT:0000006 denotes PCR product
T11240 1235-1236 CHEBI_SO_EXT:base denotes b
T11241 1242-1246 PR_EXT:000000281 denotes Gdf5
T11242 1247-1254 SO_EXT:0001026 denotes genomic
T11243 1275-1282 _FRAGMENT denotes part of
T11244 1293-1297 SO_EXT:0000852 denotes exon
T11246 1302-1312 SO_EXT:sequence_downstreamness denotes downstream
T11245 1313-1319 SO_EXT:0001014 denotes intron
T11247 1325-1339 SO_EXT:0000121 denotes forward primer
T11248 1373-1377 SO_EXT:0000147 denotes exon
T11249 1414-1428 SO_EXT:0000132 denotes reverse primer
T11250 1441-1443 NCBITaxon:10760 denotes T7
T11251 1444-1452 SO_EXT:0000167 denotes promoter
T11252 1460-1466 SO_EXT:0000440 denotes vector
T11253 1487-1488 CHEBI_SO_EXT:base denotes b
T11254 1502-1508 SO:0000357 denotes flanks
T11255 1513-1521 SO_EXT:0000188 denotes intronic
T11256 1533-1547 SO_EXT:0000121 denotes forward primer
T11257 1587-1594 SO:0001031 denotes reverse
T11258 1650-1659 SO_EXT:engineered_biological_sequence denotes construct
T11259 1796-1802 SO_EXT:0000440 denotes vector
T11260 1823-1836 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T11261 1885-1888 CHEBI_SO_EXT:DNA denotes DNA
T11262 1889-1897 SO_EXT:biological_sequence denotes sequence
T11263 1943-1952 SO_EXT:engineered_biological_sequence denotes construct
T11264 1957-1960 SO_EXT:0000153 denotes BAC
T11265 1961-1974 SO_EXT:sequence_alteration_entity_or_process denotes modifications
T11266 2016-2024 SO_EXT:sequence_alteration_process denotes modified
T11267 2025-2028 SO_EXT:0000153 denotes BAC
T11268 2053-2063 SO_EXT:transgenic_entity denotes transgenic
T11269 2064-2071 NCBITaxon:33208 denotes animals
T11270 2075-2084 SO_EXT:0000346 denotes loxP site
T11271 2100-2110 SO_EXT:0000153 denotes BAC vector
T11272 2199-2205 SO_EXT:0001026 denotes genome
T11273 2219-2222 SO_EXT:0000153 denotes BAC
T11274 2223-2226 CHEBI_SO_EXT:DNA denotes DNA
T11275 2243-2247 CHEBI:63039 denotes CsCl
T11276 2291-2297 SO_EXT:0000667 denotes insert
T11277 2307-2313 SO_EXT:0000440 denotes vector
T11278 2344-2351 CHEBI:17992 denotes sucrose
T11279 2441-2447 SO_EXT:0000440 denotes vector
T11280 2457-2460 CHEBI_SO_EXT:DNA denotes DNA
T11281 2466-2471 CHEBI_SO_EXT:molecular_probe denotes probe
T11282 2504-2510 SO_EXT:0000667 denotes insert
T11283 2536-2542 SO_EXT:0000440 denotes vector
T11284 2543-2546 CHEBI_SO_EXT:DNA denotes DNA
T11285 2579-2585 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T11286 2593-2597 CHEBI:9754 denotes Tris
T11287 2620-2624 CHEBI_EXT:EDTA denotes EDTA
T11288 2737-2743 SO_EXT:0000667 denotes insert
T11289 2744-2747 CHEBI_SO_EXT:DNA denotes DNA
T11290 2794-2804 GO:0045120 denotes pronucleus
T11291 2808-2818 GO:0009566 denotes fertilized
T11292 2819-2823 CL:0000025 denotes eggs
T11293 2835-2839 NCBITaxon:10088 denotes mice
T11294 2856-2866 SO_EXT:transgenic_entity denotes Transgenic
T11295 2877-2887 SO_EXT:transgenic_entity denotes Transgenic
T11296 2896-2900 NCBITaxon:10088 denotes mice
T11297 2943-2950 SO_EXT:0000112 denotes primers
T11298 3042-3044 SO_EXT:0000028 denotes bp
T11299 3087-3097 SO_EXT:0000153 denotes BAC vector
T11300 3104-3110 SO_EXT:0000440 denotes vector
T11301 3120-3127 SO_EXT:0000112 denotes primers
T11302 3214-3216 SO_EXT:0000028 denotes bp
T11303 3241-3245 PR_EXT:000000281 denotes Gdf5
T11304 3250-3254 NCBITaxon:10088 denotes mice
T11305 3310-3317 GO:0007618 denotes Matings
T11306 3342-3346 PR_EXT:000033987 denotes LACZ
T11307 3356-3360 NCBITaxon:10088 denotes mice
T11308 3425-3429 PR_EXT:000033987 denotes LACZ
T11309 3434-3439 PR_EXT:P05187 denotes HPLAP
T11310 3449-3456 UBERON:0000922 denotes embryos
T11311 3472-3479 UBERON:0000922 denotes embryos
T11312 3557-3561 PR_EXT:000033987 denotes LACZ
T12130 3727-3733 PR_EXT:000000035 denotes Bmpr1a
T12131 3734-3740 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T12132 3741-3745 NCBITaxon:10088 denotes mice
T12133 3746-3752 PR_EXT:000000035 denotes Bmpr1a
T12134 3753-3757 SO_EXT:sequence_nullness denotes null
T12135 3762-3768 SO:0000359 denotes floxed
T12136 3769-3776 SO_EXT:0001023 denotes alleles
T12137 3893-3901 GO_EXT:breeding denotes breeding
T12138 3903-3907 NCBITaxon:10088 denotes Mice
T12139 3921-3925 SO_EXT:sequence_nullness denotes null
T12140 3930-3936 SO:0000359 denotes floxed
T12141 3937-3944 SO_EXT:0001023 denotes alleles
T12142 3960-3965 GO:0007618 denotes mated
T12143 3969-3973 PR_EXT:000000281 denotes Gdf5
T12144 3978-3982 NCBITaxon:10088 denotes mice
T12145 4019-4023 NCBITaxon:10088 denotes mice
T12146 4094-4100 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T12147 4101-4108 NCBITaxon:33208 denotes animals
T12148 4148-4155 GO:0007618 denotes matings
T12149 4169-4177 UBERON:0004288 denotes skeletal
T12150 4222-4226 NCBITaxon:10088 denotes mice
T12151 4258-4262 UBERON:0001690 denotes ears
T12152 4288-4295 NCBITaxon:33208 denotes animals
T12153 4402-4408 UBERON:0010887 denotes tragus
T12154 4413-4423 UBERON:0016467 denotes antitragus
T12155 4465-4471 UBERON:0001757 denotes pinnae
T12156 4502-4506 NCBITaxon:10088 denotes mice
T12157 4531-4538 NCBITaxon:33208 denotes animals
T12158 4695-4700 NCBITaxon:10088 denotes mouse
T12159 4725-4731 GO_EXT:biological_movement_or_translocation_process denotes motion
T12160 4761-4763 UBERON:0001448 denotes MT
T12161 4764-4766 UBERON:0004302 denotes P1
T12162 4771-4773 UBERON:0004302 denotes P1
T12163 4774-4776 UBERON:4100005 denotes P2
T12164 4777-4783 UBERON:0004905 denotes joints
T12165 4791-4812 UBERON:0003632 denotes second hindlimb digit
T12166 4839-4846 NCBITaxon:33208 denotes animals
T12167 4878-4883 UBERON:0004905 denotes joint
T12168 5070-5077 NCBITaxon:33208 denotes animals
T12169 5100-5104 NCBITaxon:10088 denotes mice
T12170 5121-5127 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T12171 5128-5137 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T12172 5183-5187 PR_EXT:000000281 denotes Gdf5
T12173 5196-5202 PR_EXT:000000035 denotes Bmpr1a
T12174 5202-5206 SO_EXT:sequence_nullness denotes null
T12175 5243-5249 PR_EXT:000000035 denotes Bmpr1a
T12176 5249-5254 SO:0000359 denotes floxP
T12602 5399-5403 CL_GO_EXT:cell denotes Cell
T12604 5399-5403 _FRAGMENT denotes Cell
T12603 5399-5409 GO:0008219 denotes Cell death
T12605 5414-5427 GO:0008283 denotes proliferation
T12606 5435-5440 UBERON:0002101 denotes Limbs
T12607 5446-5452 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T12608 5465-5472 NCBITaxon:33208 denotes animals
T12609 5587-5593 UBERON:0000479 denotes tissue
T12610 5634-5638 CL_GO_EXT:cell denotes Cell
T12611 5634-5644 GO:0008219 denotes Cell Death
T12612 5660-5671 CHEBI:31624 denotes Fluorescein
T12613 5770-5778 CHEBI:53424 denotes Tween-20
T12614 5784-5788 NCBITaxon:9925 denotes goat
T12615 5789-5794 UBERON:0001977 denotes serum
T12616 5851-5857 NCBITaxon:9986 denotes rabbit
T12617 5863-5870 CHEBI:32958 denotes phospho
T12618 5871-5878 CHEBI:15358 denotes histone
T12619 5871-5881 PR_EXT:000027594 denotes histone-H3
T12620 5882-5890 GO:0042571 denotes antibody
T12621 5898-5905 GO:0007067 denotes Mitosis
T12622 5906-5912 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes Marker
T12623 5987-5992 CL_GO_EXT:cell denotes cells
T12624 5996-6003 GO:0007067 denotes mitosis
T12625 6005-6008 CHEBI:37987 denotes Cy3
T12626 6009-6016 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T12601 6022-6028 NCBITaxon:9986 denotes rabbit
T12627 6039-6047 GO:0042571 denotes antibody
T12628 6071-6079 GO:0042571 denotes antibody
T12629 6081-6085 CL_GO_EXT:cell denotes Cell
T12630 6081-6092 GO:0005634 denotes Cell nuclei
T12631 6098-6105 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T12632 6111-6115 CHEBI:51231 denotes DAPI
T12633 6275-6285 UBERON:0001062 denotes anatomical
T12634 6331-6338 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T12635 6339-6346 GO:0005634 denotes nuclear
T12636 6375-6378 CHEBI:37987 denotes Cy3
T12637 6379-6386 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T12638 6387-6393 GO:0005634 denotes nuclei
T12639 6478-6484 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T12640 6485-6492 NCBITaxon:33208 denotes animals
T12641 6508-6515 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T12642 6516-6521 CL_GO_EXT:cell denotes cells
T12643 6529-6550 _FRAGMENT denotes metacarpal-phalangeal
T12645 6555-6583 UBERON:0003696 denotes metatarsal-phalangeal joints
T12644 6577-6583 UBERON:0003695 denotes joints
T12646 6659-6664 UBERON:0004905 denotes joint
T12647 6694-6705 UBERON:0006052 denotes fifth digit
T12648 6745-6751 _FRAGMENT denotes tip of
T12649 6756-6761 UBERON:0009551 denotes digit
T12650 6813-6819 UBERON:0000479 denotes tissue
T13056 6909-6915 UBERON:0000479 denotes Tissue
T13057 6921-6928 NCBITaxon:33208 denotes animals
T13058 7004-7020 CHEBI_EXT:paraformaldehye denotes paraformaldehyde
T13059 7022-7025 CHEBI_EXT:paraformaldehye denotes PFA
T13060 7122-7129 CHEBI:17992 denotes sucrose
T13061 7161-7168 CHEBI:17992 denotes sucrose
T13062 7240-7246 UBERON:0000479 denotes Tissue
T13063 7252-7259 NCBITaxon:33208 denotes animals
T13064 7260-7264 GO_PATO_EXT:aging_or_agedness denotes aged
T13065 7360-7364 CHEBI_EXT:EDTA denotes EDTA
T13066 7405-7412 CHEBI:17992 denotes sucrose
T13067 7418-7427 CHEBI:75958 denotes solutions
T13068 7481-7485 UBERON_EXT:zone_of_skin_or_skin_of_body denotes skin
T13069 7491-7498 UBERON:0000479 denotes tissues
T13070 7514-7518 NCBITaxon:10088 denotes mice
T13071 7565-7571 UBERON:0000479 denotes Tissue
T13072 7657-7667 CHEBI:82468 denotes Fast Green
T13073 7681-7692 CHEBI:51686 denotes hematoxylin
T13074 7762-7766 PR_EXT:000033987 denotes LACZ
T13075 7781-7786 CHEBI:75055 denotes X-Gal
T13076 7868-7871 CHEBI_EXT:paraformaldehye denotes PFA
T13077 7896-7901 CHEBI:15377 denotes water
T13078 7924-7931 GO:0005634 denotes Nuclear
T13079 7969-7974 CHEBI:15377 denotes water
T13080 8069-8072 CHEBI_SO_EXT:RNA denotes RNA
T13081 8081-8094 GO:0097617 denotes hybridization
T13082 8200-8211 MOP:0000030 denotes acetylation
T13083 8259-8269 GO_EXT:0008233 denotes proteinase
T13084 8377-8380 CHEBI_EXT:paraformaldehye denotes PFA
T13085 8420-8433 GO:0097617 denotes hybridization
T13086 8460-8476 UBERON:0005291 denotes embryonic tissue
T13087 8521-8524 CHEBI:60004 denotes mix
T13088 8545-8551 CHEBI_SO_EXT:molecular_probe denotes Probes
T13089 8570-8575 SO_EXT:0000704 denotes genes
T13090 8608-8614 PR_EXT:000000035 denotes Bmpr1a
T13091 8638-8644 PR_EXT:000003266 denotes Col2a1
T13092 8671-8678 PR_EXT:000005693 denotes Col10a1
T13093 8699-8703 PR_EXT:000000281 denotes Gdf5
T13094 8731-8742 PR_EXT:000030444 denotes Osteocalcin
T13095 8770-8774 PR_EXT:000015431 denotes Sox5
T13096 8779-8783 PR_EXT:000015432 denotes Sox6
T13097 8822-8827 CHEBI_SO_EXT:molecular_probe denotes probe
T13098 8850-8853 PR_EXT:000003606 denotes Agg
T13099 8872-8880 OBI_SO_EXT:gene_or_genetic_investigation_or_genetic_process denotes Genetics
T13100 8892-8896 PR_EXT:000000164 denotes Bmp2
T13101 8901-8905 PR_EXT:000000165 denotes Bmp4
T13102 8941-8947 PR_EXT:000003264 denotes Col1a1
T13103 8986-8992 PR_EXT:000000036 denotes Bmpr1b
T13104 8994-9000 PR_EXT:000003328 denotes Col3a1
T13105 9006-9010 PR_EXT:000010208 denotes Mat4
T13106 9011-9017 CHEBI_SO_EXT:molecular_probe denotes probes
T13107 9033-9037 SO_EXT:0000345 denotes ESTs
T13108 9049-9054 SO_EXT:sequence_cloned_entity denotes clone
T13109 9207-9210 CHEBI_EXT:paraformaldehye denotes PFA
T13110 9256-9262 NCBITaxon:27592 denotes bovine
T13111 9437-9454 CHEBI:16240 denotes hydrogen peroxide
T13112 9463-9471 CHEBI:17790 denotes methanol
T13113 9517-9524 CHEBI:53424 denotes Tween20
T13114 9530-9534 NCBITaxon:9925 denotes goat
T13115 9544-9550 NCBITaxon:27592 denotes bovine
T13116 9551-9556 UBERON:0001977 denotes serum
T13117 9599-9609 GO:0042571 denotes antibodies
T13118 9625-9633 CHEBI:53424 denotes Tween 20
T13119 9639-9643 NCBITaxon:9925 denotes goat
T13120 9653-9659 NCBITaxon:27592 denotes bovine
T13121 9660-9665 UBERON:0001977 denotes serum
T13122 9685-9691 CHEBI:15956 denotes Biotin
T13123 9692-9699 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T13124 9710-9720 GO:0042571 denotes antibodies
T13125 9740-9746 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes tagged
T13126 9859-9869 GO:0042571 denotes antibodies
T13127 9895-9899 NCBITaxon:9925 denotes goat
T13128 9905-9910 NCBITaxon:10088 denotes mouse
T13129 9911-9916 PR_EXT:000010473 denotes MMP13
T13130 9987-9993 NCBITaxon:9986 denotes rabbit
T13131 9999-10004 NCBITaxon:9606 denotes human
T13132 10005-10009 PR_EXT:000015435 denotes SOX9
T13133 10048-10054 NCBITaxon:9986 denotes rabbit
T13134 10060-10074 GO_PATO_EXT:phosphorylation_process_or_quality denotes phosphorylated
T13135 10075-10079 PR_EXT:000015435 denotes SOX9
T13136 10081-10085 PR_EXT:000015435 denotes SOX9
R7264 T11244 T11243 _lexicallyChainedTo exon,part of
R7265 T11245 T11243 _lexicallyChainedTo intron,part of
R8316 T12605 T12604 _lexicallyChainedTo proliferation,Cell
R8317 T12644 T12643 _lexicallyChainedTo joints,metacarpal-phalangeal
R8318 T12649 T12648 _lexicallyChainedTo digit,tip of