craft-ca-core-ex-dev Home  

PMC:1253828 / 5385-15039 JSONTXT 5 Projects

Annnotations TAB TSV DIC JSON TextAE

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2011 37-41 PR_EXT:000010717 denotes Mtf1
T2012 63-67 NCBITaxon:10088 denotes mice
T2013 72-77 UBERON:0002107 denotes liver
T2014 87-95 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T2015 96-100 PR_EXT:000010717 denotes Mtf1
T2016 122-126 NCBITaxon:10088 denotes mice
T2017 205-219 SO_EXT:0000040 denotes genomic clones
T2018 231-236 SO_EXT:0000147 denotes exons
T2019 247-251 PR_EXT:000010717 denotes Mtf1
T2020 277-281 SO_EXT:0000704 denotes gene
T2021 282-298 SO_EXT:0001644 denotes targeting vector
T2022 314-327 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T2023 352-360 CHEBI:7507 denotes neomycin
T2024 372-380 SO_EXT:0005853 denotes cassette
T2025 382-385 GO_EXT:phosphoglycerate_kinase denotes PGK
T2026 386-389 CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase denotes neo
T2027 391-398 SO:0000357 denotes flanked
T2028 406-416 SO_EXT:0000346 denotes loxP sites
T2029 421-427 SO_EXT:sequence_cloning_process denotes cloned
T2030 453-457 SO_EXT:0000147 denotes exon
T2031 463-467 PR_EXT:000010717 denotes Mtf1
T2032 479-488 SO_EXT:0000346 denotes loxP site
T2033 493-499 SO_EXT:sequence_cloning_process denotes cloned
T2034 525-529 SO_EXT:0000147 denotes exon
T2035 535-544 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymidine
T2036 535-551 GO_PR_EXT:thymidine_kinase denotes thymidine kinase
T2037 553-555 GO_PR_EXT:thymidine_kinase denotes TK
T2038 557-565 SO_EXT:0005853 denotes cassette
T2039 570-578 SO_EXT:sequence_insertion_process denotes inserted
T2040 602-606 SO_EXT:0000147 denotes exon
T2041 614-622 CL:0002322 denotes ES cells
T2042 617-622 CL_GO_EXT:cell denotes cells
T2043 652-662 SO_EXT:sequence_linearization denotes linearized
T2044 663-679 SO_EXT:0001644 denotes targeting vector
T2045 709-713 CHEBI:42768 denotes G418
T2046 813-823 GO:0010467 denotes expression
T2047 831-842 GO_EXT:recombinase denotes recombinase
T2048 865-868 GO_EXT:phosphoglycerate_kinase denotes PGK
T2049 869-872 CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase denotes neo
T2050 873-881 SO_EXT:0005853 denotes cassette
T2051 887-891 NCBITaxon:10088 denotes mice
T2052 905-913 SO_EXT:sequence_alteration_process denotes modified
T2053 914-918 PR_EXT:000010717 denotes Mtf1
T2054 918-922 SO_EXT:0000346 denotes loxP
T2055 923-929 SO_EXT:0001023 denotes allele
T2056 970-976 SO_EXT:sequence_cloned_entity denotes clones
T2057 990-1001 UBERON:0000358 denotes blastocysts
T2058 1058-1065 NCBITaxon:33208 denotes animals
T2059 1067-1071 PR_EXT:000010717 denotes Mtf1
T2060 1071-1075 SO_EXT:0000346 denotes loxP
T2061 1076-1080 SO_EXT:0000346 denotes loxP
T2062 1108-1119 GO_EXT:recombinase denotes recombinase
T2063 1120-1130 SO_EXT:transgenic_entity denotes transgenic
T2064 1136-1138 PR_EXT:000010788 denotes Mx
T2065 1200-1205 UBERON:0002107 denotes liver
T2066 1215-1219 PR_EXT:000010717 denotes Mtf1
T2067 1239-1243 NCBITaxon:10088 denotes mice
T2068 1286-1293 SO_EXT:0000112 denotes primers
T2069 1312-1323 GO_EXT:recombinase denotes recombinase
T2070 1390-1394 PR_EXT:000010717 denotes Mtf1
T2071 1394-1398 SO_EXT:0000346 denotes loxP
T2072 1402-1411 SO_EXT:wild_type_entity_or_quality denotes wild-type
T2073 1412-1418 SO_EXT:0001023 denotes allele
T2390 1490-1496 NCBITaxon:33208 denotes Animal
T2391 1526-1530 PATO_UBERON_EXT:male_or_bearer_of_maleness denotes male
T2392 1531-1535 PR_EXT:000010717 denotes Mtf1
T2393 1535-1539 SO_EXT:0000346 denotes loxP
T2394 1540-1544 SO_EXT:0000346 denotes loxP
T2395 1545-1549 NCBITaxon:10088 denotes mice
T2396 1564-1566 PR_EXT:000010788 denotes Mx
T2397 1571-1580 SO_EXT:0000902 denotes transgene
T2398 1582-1586 PR_EXT:000010717 denotes Mtf1
T2399 1586-1590 SO_EXT:0000346 denotes loxP
T2400 1591-1595 SO_EXT:0000346 denotes loxP
T2401 1596-1598 PR_EXT:000010788 denotes Mx
T2402 1611-1615 PR_EXT:000010717 denotes Mtf1
T2403 1615-1617 PR_EXT:000010788 denotes Mx
T2404 1655-1664 SO_EXT:0000902 denotes transgene
T2405 1666-1670 PR_EXT:000010717 denotes Mtf1
T2406 1670-1674 SO_EXT:0000346 denotes loxP
T2407 1675-1679 SO_EXT:0000346 denotes loxP
T2408 1688-1692 PR_EXT:000010717 denotes Mtf1
T2409 1692-1696 SO_EXT:0000346 denotes loxP
T2410 1717-1727 UBERON:0001179 denotes peritoneal
T2411 1764-1783 CHEBI_SO_EXT:double_stranded_RNA denotes double-stranded RNA
T2412 1784-1796 _FRAGMENT denotes polyinosinic
T2414 1788-1796 CHEBI_SO_EXT:inosine denotes inosinic
T2415 1797-1815 CHEBI_EXT:polyC_acid denotes polycytidylic acid
T2413 1811-1815 CHEBI:76777 denotes acid
T2416 1817-1819 CHEBI:76777 denotes pI
T2417 1820-1822 CHEBI_EXT:polyC_acid denotes pC
T2418 1852-1861 CHEBI_EXT:phosphate denotes phosphate
T2419 1862-1870 CHEBI_CHMO_EXT:buffer_process denotes buffered
T2420 1871-1877 CHEBI_EXT:saline_solution denotes saline
T2421 1925-1928 CHEBI_SO_EXT:DNA denotes DNA
T2422 1929-1936 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T2423 1954-1963 SO_EXT:biological_sequence denotes sequences
T2424 1969-1974 PR_EXT:000010717 denotes MTF-1
T2425 1982-1986 SO_EXT:0000704 denotes gene
T2426 2011-2015 NCBITaxon:10088 denotes mice
T2427 2028-2030 CHEBI:76777 denotes pI
T2428 2031-2033 CHEBI_EXT:polyC_acid denotes pC
T2429 2067-2072 CHEBI_EXT:metal denotes metal
T2430 2084-2088 NCBITaxon:10088 denotes mice
T2431 2120-2122 CHEBI:76777 denotes pI
T2432 2123-2125 CHEBI_EXT:polyC_acid denotes pC
T2433 2141-2150 UBERON_EXT:zone_of_skin_or_skin_of_body denotes cutaneous
T2434 2154-2156 UBERON_EXT:zone_of_skin_or_skin_of_body denotes c.
T2435 2189-2193 UBERON_EXT:body denotes body
T2436 2201-2206 CHEBI:50292 denotes CdSO4
T2437 2213-2218 CHEBI:50292 denotes CdSO4
T2438 2222-2225 CHEBI:15377 denotes H2O
T2439 2227-2234 CHEBI_EXT:cadmium denotes cadmium
T2440 2258-2262 UBERON_EXT:body denotes body
T2441 2270-2273 CHEBI:15377 denotes H2O
T2442 2302-2313 GO_EXT:killing denotes sacrificing
T2485 2367-2370 CHEBI_SO_EXT:RNA denotes RNA
T2486 2389-2394 UBERON:0002107 denotes liver
T2487 2395-2401 UBERON:0000479 denotes tissue
T2488 2405-2407 CHEBI:76777 denotes pI
T2489 2408-2410 CHEBI_EXT:polyC_acid denotes pC
T2490 2429-2436 CHEBI_EXT:cadmium denotes cadmium
T2491 2445-2449 PR_EXT:000010717 denotes Mtf1
T2492 2449-2451 PR_EXT:000010788 denotes Mx
T2493 2460-2464 PR_EXT:000010717 denotes Mtf1
T2494 2464-2468 SO_EXT:0000346 denotes loxP
T2495 2469-2473 NCBITaxon:10088 denotes mice
T2496 2485-2493 SO_EXT:genotype_or_entity_with_genotype denotes genotype
T2497 2524-2528 PATO_UBERON_EXT:male_or_bearer_of_maleness denotes male
T2498 2587-2591 SO_EXT:0000704 denotes Gene
T2499 2587-2602 GO:0010467 denotes Gene expression
T2500 2683-2688 NCBITaxon:10088 denotes Mouse
T2501 2689-2695 SO_EXT:0001026 denotes Genome
T2502 2787-2795 CHEBI_EXT:33893 denotes reagents
T2503 2812-2816 SO_EXT:cDNA denotes cDNA
T2504 2851-2871 SO_EXT:double_stranded_complementary_DNA denotes Double-Stranded cDNA
T2505 2918-2921 CHEBI_SO_EXT:RNA denotes RNA
T2506 2932-2945 GO_EXT:transcription denotes transcription
T2507 2987-2990 CHEBI_SO_EXT:RNA denotes RNA
T2508 2991-3001 SO_EXT:0000673 denotes Transcript
T2509 3002-3010 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes Labeling
T2510 3046-3050 SO_EXT:cDNA denotes cDNA
T2511 3069-3073 SO_EXT:cDNA denotes cDNA
T2512 3275-3280 CHEBI_SO_EXT:molecular_probe denotes probe
T2513 3476-3484 OBI_SO_EXT:gene_or_genetic_investigation_or_genetic_process denotes Genetics
T2514 3599-3606 CHEBI_EXT:cadmium denotes cadmium
T2515 3619-3624 PR_EXT:000010717 denotes MTF-1
T2516 3637-3642 SO_EXT:0000704 denotes genes
T2517 3644-3649 SO_EXT:0000704 denotes Genes
T2518 3687-3696 GO:0010467 denotes expressed
T2519 3742-3752 GO:0010467 denotes expression
T2520 3797-3805 SO_EXT:genotype_or_entity_with_genotype denotes genotype
T2521 3904-3908 SO_EXT:0000704 denotes gene
T2522 3948-3952 NCBITaxon:10088 denotes mice
T2523 3990-3994 NCBITaxon:10088 denotes mice
T2524 4061-4070 SO:0000993 denotes consensus
T2525 4071-4079 SO_EXT:biological_sequence denotes sequence
T2526 4095-4103 SO_EXT:0000167 denotes promoter
T2527 4116-4124 SO_EXT:sequence_upstreamness denotes upstream
T2528 4125-4134 SO_EXT:biological_sequence denotes sequences
T2529 4153-4158 SO_EXT:0000704 denotes genes
T2530 4225-4231 SO_EXT:0001026 denotes Genome
T3110 4282-4284 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T3111 4293-4295 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T3112 4337-4339 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T3113 4420-4427 GO_PR_EXT:deoxyribonuclease_I denotes DNase I
T3114 4443-4446 CHEBI_SO_EXT:RNA denotes RNA
T3115 4448-4451 CHEBI_SO_EXT:RNA denotes RNA
T3116 4539-4546 SO_EXT:0000112 denotes primers
T3117 4548-4553 PR_EXT:000005958 denotes Csrp1
T3118 4613-4624 CHEBI:17368 denotes hypoxanthin
T3119 4613-4657 GO_PR_EXT:hypoxanthine_guanine_phosphoribosyltransferase denotes hypoxanthin-guanin-phosphoribosyltransferase
T3120 4625-4631 CHEBI_EXT:guanine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes guanin
T3121 4659-4663 GO_PR_EXT:hypoxanthine_guanine_phosphoribosyltransferase denotes Hprt
T3122 4724-4728 PR_EXT:000010717 denotes Mtf1
T3123 4794-4799 PR_EXT:000011059 denotes Ndrg1
T3124 4859-4864 PR_EXT:000014662 denotes Sepw1
T3125 4924-4932 PR_EXT:000015124 denotes Slc39a10
T3231 4993-5004 PR_EXT:000025471 denotes S1 nuclease
T3232 4996-5004 GO_EXT:0004518 denotes nuclease
T3233 5016-5027 SO_EXT:0000673 denotes transcripts
T3234 5029-5031 PR_EXT:000025471 denotes S1
T3235 5042-5044 PR_EXT:000025471 denotes S1
T3236 5111-5118 GO_PR_EXT:deoxyribonuclease_I denotes DNase I
T3237 5134-5137 CHEBI_SO_EXT:RNA denotes RNA
T3238 5139-5142 CHEBI_SO_EXT:RNA denotes RNA
T3239 5225-5234 CHEBI_EXT:polyatomic_entity_or_group denotes Molecular
T3240 5246-5248 PR_EXT:000025471 denotes S1
T3241 5286-5289 CHEBI:37972 denotes 32P
T3242 5290-5297 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T3243 5298-5314 CHEBI_SO_EXT:oligonucleotide denotes oligonucleotides
T3244 5316-5320 GO_PR_EXT:hypoxanthine_guanine_phosphoribosyltransferase denotes Hprt
T3245 5321-5323 PR_EXT:000025471 denotes S1
T3246 5405-5410 PR_EXT:000014662 denotes Sepw1
T3247 5411-5413 PR_EXT:000025471 denotes S1
T3306 5558-5565 CHEBI_PR_EXT:protein denotes Protein
T3307 5585-5590 UBERON:0002107 denotes liver
T3308 5591-5597 UBERON:0000479 denotes tissue
T3309 5610-5616 UBERON:0000479 denotes Tissue
T3310 5617-5624 CHEBI_PR_EXT:protein denotes Protein
T3311 5636-5643 CHEBI_EXT:33893 denotes Reagent
T3312 5721-5726 NCBITaxon:10088 denotes mouse
T3313 5727-5733 UBERON:0000479 denotes tissue
T3314 5748-5755 CHEBI_EXT:33893 denotes reagent
T3315 5827-5834 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T3316 5885-5888 CHEBI:37972 denotes 32P
T3317 5893-5900 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T3318 5901-5933 SO_EXT:0000442 denotes double-stranded oligonucleotides
T3319 5917-5933 CHEBI_SO_EXT:oligonucleotide denotes oligonucleotides
T3320 5953-5958 UBERON:0002107 denotes liver
T3321 5959-5966 CHEBI_PR_EXT:protein denotes protein
T3322 6017-6024 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T3323 6036-6051 CHEBI_SO_EXT:oligonucleotide denotes oligonucleotide
T3324 6069-6076 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T3325 6169-6178 CHEBI_EXT:polyatomic_entity_or_group denotes Molecular
T3326 6204-6220 CHEBI_SO_EXT:oligonucleotide denotes oligonucleotides
T3327 6226-6234 GO:0097617 denotes annealed
T3328 6263-6268 PR_EXT:000005958 denotes Csrp1
T3329 6348-6353 PR_EXT:000005958 denotes Csrp1
T3330 6430-6435 PR_EXT:000005958 denotes Csrp1
T3331 6512-6517 PR_EXT:000005958 denotes Csrp1
T3332 6594-6598 PR_EXT:P04386 denotes Gal4
T3333 6679-6684 NCBITaxon:10088 denotes mouse
T3334 6685-6688 PR_EXT:000010925 denotes Mt1
T3335 6689-6697 SO_EXT:0000167 denotes promoter
T3336 6798-6807 _FRAGMENT denotes synthetic
T3338 6812-6821 SO:0000993 denotes consensus
T3337 6822-6830 SO:0000351 denotes sequence
T3339 6924-6929 PR_EXT:000011059 denotes Ndrg1
T3340 7002-7007 PR_EXT:000011059 denotes Ndrg1
T3341 7080-7085 PR_EXT:000011059 denotes Ndrg1
T3342 7189-7194 PR_EXT:000014662 denotes Sepw1
T3343 7284-7289 PR_EXT:000014662 denotes Sepw1
T3344 7368-7376 PR_EXT:000015124 denotes Slc39a10
T3345 7462-7470 PR_EXT:000015124 denotes Slc39a10
T3346 7547-7568 PR_EXT:000000133 denotes Specificity protein 1
T3347 7559-7566 CHEBI_PR_EXT:protein denotes protein
T3348 7570-7573 PR_EXT:000000133 denotes Sp1
T3349 7575-7582 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T3350 7583-7591 SO_EXT:biological_sequence denotes sequence
T4194 7653-7657 CL_GO_EXT:cell denotes Cell
T4195 7674-7683 UBERON:0000922 denotes embryonic
T4196 7684-7695 CL:0000057 denotes fibroblasts
T4197 7730-7734 PR_EXT:000010717 denotes Mtf1
T4198 7734-7738 SO_EXT:0000346 denotes loxP
T4199 7739-7744 NCBITaxon:10088 denotes mouse
T4200 7745-7751 UBERON:0000922 denotes embryo
T4201 7756-7761 GO:0040007 denotes grown
T4202 7798-7804 NCBITaxon:27592 denotes bovine
T4203 7805-7810 UBERON:0001977 denotes serum
T4204 7827-7837 CHEBI:17334 denotes penicillin
T4205 7838-7850 CHEBI:17076 denotes streptomycin
T4206 7872-7883 CHEBI_EXT:L_glutamine denotes l-glutamine
T4207 7874-7883 CHEBI_SO_EXT:glutamine denotes glutamine
T4208 7916-7929 CL:0000001 denotes primary cells
T4209 7924-7929 CL_GO_EXT:cell denotes cells
T4210 7935-7946 GO:0009294 denotes transfected
T4211 7964-7974 GO:0010467 denotes expression
T4212 7975-7982 SO_EXT:0000155 denotes plasmid
T4213 7983-7989 SO_EXT:sequence_coding_function denotes coding
T4214 7994-8009 NCBITaxon:10633 denotes simian virus 40
T4215 8011-8015 NCBITaxon:10633 denotes SV40
T4216 8025-8032 CHEBI_EXT:59132 denotes antigen
T4217 8047-8062 NCBITaxon:10358 denotes cytomegalovirus
T4218 8064-8067 NCBITaxon:10358 denotes CMV
T4219 8069-8077 SO_EXT:0000167 denotes promoter
T4220 8100-8107 CHEBI_EXT:33893 denotes reagent
T4221 8167-8171 CL_GO_EXT:cell denotes Cell
T4222 8212-8217 NCBITaxon:10088 denotes mouse
T4223 8218-8227 UBERON:0000922 denotes embryonic
T4224 8218-8227 _FRAGMENT denotes embryonic
T4226 8228-8243 CL:0000057 denotes fibroblast cell
T4225 8239-8243 CL:0002321 denotes cell
T4227 8239-8243 CL_GO_EXT:cell denotes cell
T4228 8288-8292 PR_EXT:000010717 denotes Mtf1
T4229 8292-8296 SO_EXT:0000346 denotes loxP
T4230 8297-8305 SO_EXT:genotype_or_entity_with_genotype denotes genotype
T4231 8334-8341 SO_EXT:0001026 denotes genomic
T4232 8363-8370 CHEBI_EXT:59132 denotes antigen
T4233 8419-8424 CL_GO_EXT:cell denotes cells
T4234 8438-8449 GO:0009294 denotes transfected
T4235 8457-8474 CHEBI:77635 denotes calcium phosphate
T4236 8506-8516 GO:0010467 denotes expression
T4237 8517-8524 SO_EXT:0000155 denotes plasmid
T4238 8533-8544 GO_EXT:recombinase denotes recombinase
T4239 8559-8562 NCBITaxon:10358 denotes CMV
T4240 8563-8571 SO_EXT:0000167 denotes promoter
T4241 8589-8599 GO:0010467 denotes expression
T4242 8600-8607 SO_EXT:0000155 denotes plasmid
T4243 8616-8624 CHEBI:7507 denotes neomycin
T4244 8636-8640 SO_EXT:0000704 denotes gene
T4245 8651-8658 GO:0065007 denotes control
T4246 8666-8668 GO_PR_EXT:thymidine_kinase denotes TK
T4247 8669-8677 SO_EXT:0000167 denotes promoter
T4248 8686-8697 GO:0009294 denotes transfected
T4249 8698-8703 CL_GO_EXT:cell denotes cells
T4250 8747-8751 CHEBI:42768 denotes G418
T4251 8775-8781 SO_EXT:sequence_cloned_entity denotes clones
T4252 8795-8800 CL_GO_EXT:cell denotes cells
T4253 8820-8825 GO:0040007 denotes grown
T4254 8849-8859 GO:0010467 denotes expression
T4255 8867-8878 GO_EXT:recombinase denotes recombinase
T4256 8883-8891 SO_EXT:sequence_deletion_process denotes excision
T4257 8895-8900 SO_EXT:0000147 denotes exons
T4258 8912-8916 PR_EXT:000010717 denotes Mtf1
T4259 8934-8936 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T4260 8946-8950 CL_GO_EXT:cell denotes cell
T4261 8990-8998 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T4262 9002-9006 PR_EXT:000010717 denotes Mtf1
T4440 9083-9088 CL_GO_EXT:cell denotes cells
T4441 9117-9123 UBERON:0000479 denotes tissue
T4442 9154-9160 GO_PATO_EXT:biological_adhesion_or_attachedness denotes adhere
T4443 9175-9180 CL_GO_EXT:cell denotes cells
T4444 9257-9287 CHEBI:28714 denotes l-buthionine-[S,R]-sulfoximine
T4445 9289-9292 CHEBI:28714 denotes BSO
T4446 9305-9309 CHEBI_EXT:23888 denotes drug
T4447 9324-9335 CHEBI:16856 denotes glutathione
T4448 9324-9345 GO:0006750 denotes glutathione synthesis
T4449 9359-9364 CL_GO_EXT:cell denotes cells
T4450 9399-9404 CHEBI:35456 denotes CdCl2
T4451 9503-9506 CHEBI:53233 denotes MTT
T4452 9508-9568 CHEBI:53233 denotes 3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyl tetrazolium bromid
T4453 9576-9580 CL_GO_EXT:cell denotes Cell
T4454 9576-9594 GO:0008283 denotes Cell Proliferation
R1486 T2413 T2412 _lexicallyChainedTo acid,polyinosinic
R2088 T3337 T3336 _lexicallyChainedTo sequence,synthetic
R2794 T4225 T4224 _lexicallyChainedTo cell,embryonic